BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1064c
Length=139
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608204|ref|NP_215580.1| lipoprotein LpqV [Mycobacterium tub... 269 1e-70
gi|340626075|ref|YP_004744527.1| putative lipoprotein LPQV [Myco... 267 3e-70
gi|167967659|ref|ZP_02549936.1| lipoprotein lpqV [Mycobacterium ... 246 1e-63
gi|342861657|ref|ZP_08718303.1| LpqV [Mycobacterium colombiense ... 144 3e-33
gi|296169931|ref|ZP_06851540.1| LpqV protein [Mycobacterium para... 144 6e-33
gi|254822061|ref|ZP_05227062.1| LpqV [Mycobacterium intracellula... 138 2e-31
gi|183984373|ref|YP_001852664.1| lipoprotein LpqV [Mycobacterium... 138 3e-31
gi|118616105|ref|YP_904437.1| lipoprotein LpqV [Mycobacterium ul... 135 2e-30
gi|41407111|ref|NP_959947.1| LpqV [Mycobacterium avium subsp. pa... 134 6e-30
gi|336461465|gb|EGO40335.1| hypothetical protein MAPs_30450 [Myc... 132 2e-29
gi|118467266|ref|YP_880437.1| LpqV protein [Mycobacterium avium ... 130 6e-29
gi|240170301|ref|ZP_04748960.1| putative lipoprotein [Mycobacter... 126 9e-28
gi|118473319|ref|YP_889527.1| LpqV protein [Mycobacterium smegma... 93.6 1e-17
gi|145222620|ref|YP_001133298.1| hypothetical protein Mflv_2032 ... 90.5 8e-17
gi|169628274|ref|YP_001701923.1| putative lipoprotein LpqV [Myco... 90.1 1e-16
gi|120405637|ref|YP_955466.1| LpqV [Mycobacterium vanbaalenii PY... 89.0 2e-16
gi|108801133|ref|YP_641330.1| protein LpqV [Mycobacterium sp. MC... 84.0 6e-15
gi|156086502|ref|XP_001610660.1| hypothetical protein [Babesia b... 33.9 8.3
>gi|15608204|ref|NP_215580.1| lipoprotein LpqV [Mycobacterium tuberculosis H37Rv]
gi|15840497|ref|NP_335534.1| hypothetical protein MT1094 [Mycobacterium tuberculosis CDC1551]
gi|31792255|ref|NP_854748.1| putative lipoprotein LPQV [Mycobacterium bovis AF2122/97]
68 more sequence titles
Length=139
Score = 269 bits (687), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/139 (99%), Positives = 139/139 (100%), Gaps = 0/139 (0%)
Query 1 VRPSRYAPLLCAMVLALAWLSAVAGCSRGGSSKAGRSSSVAGTLPAGVVGVSPAGVTTRV 60
+RPSRYAPLLCAMVLALAWLSAVAGCSRGGSSKAGRSSSVAGTLPAGVVGVSPAGVTTRV
Sbjct 1 MRPSRYAPLLCAMVLALAWLSAVAGCSRGGSSKAGRSSSVAGTLPAGVVGVSPAGVTTRV 60
Query 61 DAPAESTEEEYYQACHAARLWMDAQPGSGESLIEPYLAVVQASPSGVAGSWHIRWAALTP 120
DAPAESTEEEYYQACHAARLWMDAQPGSGESLIEPYLAVVQASPSGVAGSWHIRWAALTP
Sbjct 61 DAPAESTEEEYYQACHAARLWMDAQPGSGESLIEPYLAVVQASPSGVAGSWHIRWAALTP 120
Query 121 ARQAAVIVAARAAANAECG 139
ARQAAVIVAARAAANAECG
Sbjct 121 ARQAAVIVAARAAANAECG 139
>gi|340626075|ref|YP_004744527.1| putative lipoprotein LPQV [Mycobacterium canettii CIPT 140010059]
gi|340004265|emb|CCC43406.1| putative lipoprotein LPQV [Mycobacterium canettii CIPT 140010059]
Length=139
Score = 267 bits (683), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 137/139 (99%), Positives = 138/139 (99%), Gaps = 0/139 (0%)
Query 1 VRPSRYAPLLCAMVLALAWLSAVAGCSRGGSSKAGRSSSVAGTLPAGVVGVSPAGVTTRV 60
+RPSRYAPLLC MVLALAWLSAVAGCSRGGSSKAGRSSSVAGTLPAGVVGVSPAGVTTRV
Sbjct 1 MRPSRYAPLLCVMVLALAWLSAVAGCSRGGSSKAGRSSSVAGTLPAGVVGVSPAGVTTRV 60
Query 61 DAPAESTEEEYYQACHAARLWMDAQPGSGESLIEPYLAVVQASPSGVAGSWHIRWAALTP 120
DAPAESTEEEYYQACHAARLWMDAQPGSGESLIEPYLAVVQASPSGVAGSWHIRWAALTP
Sbjct 61 DAPAESTEEEYYQACHAARLWMDAQPGSGESLIEPYLAVVQASPSGVAGSWHIRWAALTP 120
Query 121 ARQAAVIVAARAAANAECG 139
ARQAAVIVAARAAANAECG
Sbjct 121 ARQAAVIVAARAAANAECG 139
>gi|167967659|ref|ZP_02549936.1| lipoprotein lpqV [Mycobacterium tuberculosis H37Ra]
gi|254231354|ref|ZP_04924681.1| lipoprotein lpqV [Mycobacterium tuberculosis C]
gi|254550052|ref|ZP_05140499.1| lipoprotein lpqV [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
6 more sequence titles
Length=127
Score = 246 bits (627), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%)
Query 13 MVLALAWLSAVAGCSRGGSSKAGRSSSVAGTLPAGVVGVSPAGVTTRVDAPAESTEEEYY 72
MVLALAWLSAVAGCSRGGSSKAGRSSSVAGTLPAGVVGVSPAGVTTRVDAPAESTEEEYY
Sbjct 1 MVLALAWLSAVAGCSRGGSSKAGRSSSVAGTLPAGVVGVSPAGVTTRVDAPAESTEEEYY 60
Query 73 QACHAARLWMDAQPGSGESLIEPYLAVVQASPSGVAGSWHIRWAALTPARQAAVIVAARA 132
QACHAARLWMDAQPGSGESLIEPYLAVVQASPSGVAGSWHIRWAALTPARQAAVIVAARA
Sbjct 61 QACHAARLWMDAQPGSGESLIEPYLAVVQASPSGVAGSWHIRWAALTPARQAAVIVAARA 120
Query 133 AANAECG 139
AANAECG
Sbjct 121 AANAECG 127
>gi|342861657|ref|ZP_08718303.1| LpqV [Mycobacterium colombiense CECT 3035]
gi|342130791|gb|EGT84087.1| LpqV [Mycobacterium colombiense CECT 3035]
Length=144
Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/120 (70%), Positives = 95/120 (80%), Gaps = 5/120 (4%)
Query 25 GCSRGGSSKA-----GRSSSVAGTLPAGVVGVSPAGVTTRVDAPAESTEEEYYQACHAAR 79
GCS GG S A R + + +LPAG VG+SP+GVTTRVD PA STEEEYYQACHAA+
Sbjct 25 GCSHGGHSGAPASPSARQAGIPASLPAGAVGLSPSGVTTRVDVPANSTEEEYYQACHAAK 84
Query 80 LWMDAQPGSGESLIEPYLAVVQASPSGVAGSWHIRWAALTPARQAAVIVAARAAANAECG 139
WMDAQP +G SL EPYL++VQASP+G AGSW+ W+ LTPARQAAVIVAARAAAN ECG
Sbjct 85 EWMDAQPKTGASLFEPYLSMVQASPAGTAGSWNAPWSKLTPARQAAVIVAARAAANDECG 144
>gi|296169931|ref|ZP_06851540.1| LpqV protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295895395|gb|EFG75100.1| LpqV protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=130
Score = 144 bits (362), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/125 (69%), Positives = 93/125 (75%), Gaps = 6/125 (4%)
Query 20 LSAVAGCSRGGSSKAGRSSSV------AGTLPAGVVGVSPAGVTTRVDAPAESTEEEYYQ 73
L AV GCS G SSS AG P G VG SPAGVTTRVD PA STEEEYYQ
Sbjct 5 LLAVMGCSHGAPGGETASSSARPAGIPAGAAPPGAVGRSPAGVTTRVDVPANSTEEEYYQ 64
Query 74 ACHAARLWMDAQPGSGESLIEPYLAVVQASPSGVAGSWHIRWAALTPARQAAVIVAARAA 133
ACHAAR+WMDAQPG+ SL EPYLA+VQA+P+G AGSW+ RWA LTPARQAAVI AARAA
Sbjct 65 ACHAARVWMDAQPGTDRSLFEPYLAMVQAAPAGTAGSWNARWADLTPARQAAVITAARAA 124
Query 134 ANAEC 138
A+ EC
Sbjct 125 ADGEC 129
>gi|254822061|ref|ZP_05227062.1| LpqV [Mycobacterium intracellulare ATCC 13950]
Length=111
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/98 (77%), Positives = 85/98 (87%), Gaps = 0/98 (0%)
Query 42 GTLPAGVVGVSPAGVTTRVDAPAESTEEEYYQACHAARLWMDAQPGSGESLIEPYLAVVQ 101
G++PAG +GVSP GVTTRVD PA STEEEYYQACHAA++WMD QP +G SL EPYLA++Q
Sbjct 14 GSVPAGAIGVSPGGVTTRVDVPAHSTEEEYYQACHAAKVWMDGQPRTGASLFEPYLAMLQ 73
Query 102 ASPSGVAGSWHIRWAALTPARQAAVIVAARAAANAECG 139
ASPSG AGSW+ W+ LTPARQAAVIVAARAAAN ECG
Sbjct 74 ASPSGTAGSWNAPWSKLTPARQAAVIVAARAAANDECG 111
>gi|183984373|ref|YP_001852664.1| lipoprotein LpqV [Mycobacterium marinum M]
gi|183177699|gb|ACC42809.1| lipoprotein LpqV [Mycobacterium marinum M]
Length=155
Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/147 (58%), Positives = 103/147 (71%), Gaps = 9/147 (6%)
Query 2 RPSRYAPLLCAMVLALAWLSAVAGCSRGGSSKAGRSSS---------VAGTLPAGVVGVS 52
RP +CA ++ A +SA+AGCS ++ +SS +L G VGVS
Sbjct 9 RPRHQCWEVCAPLIVAAGVSALAGCSTDANNGTATTSSGPSAKTTAPPVSSLAPGAVGVS 68
Query 53 PAGVTTRVDAPAESTEEEYYQACHAARLWMDAQPGSGESLIEPYLAVVQASPSGVAGSWH 112
P GVTTRVD PAESTEEEY+QACHAA++WMDAQP + + IEPYLA+VQAS SGVAG+W+
Sbjct 69 PTGVTTRVDVPAESTEEEYFQACHAAKVWMDAQPATEQPRIEPYLAMVQASESGVAGTWN 128
Query 113 IRWAALTPARQAAVIVAARAAANAECG 139
+RWA L+ RQAAVIVAA AAAN ECG
Sbjct 129 MRWADLSLPRQAAVIVAAAAAANNECG 155
>gi|118616105|ref|YP_904437.1| lipoprotein LpqV [Mycobacterium ulcerans Agy99]
gi|118568215|gb|ABL02966.1| lipoprotein LpqV [Mycobacterium ulcerans Agy99]
Length=155
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/147 (57%), Positives = 102/147 (70%), Gaps = 9/147 (6%)
Query 2 RPSRYAPLLCAMVLALAWLSAVAGCSRGGSSKAGRSSS---------VAGTLPAGVVGVS 52
RP +CA ++ A +SA+AGCS S+ +SS +L G VGVS
Sbjct 9 RPRHQCWEVCAPLIVAAGVSALAGCSTDASNGTATTSSGPSAKTTAPPVSSLAPGAVGVS 68
Query 53 PAGVTTRVDAPAESTEEEYYQACHAARLWMDAQPGSGESLIEPYLAVVQASPSGVAGSWH 112
P GVTTR+D PAESTEEEY+QACHAA++WMDAQP + + IEPYLA+VQAS SGVAG+W+
Sbjct 69 PTGVTTRIDVPAESTEEEYFQACHAAKVWMDAQPATEQPRIEPYLAMVQASESGVAGTWN 128
Query 113 IRWAALTPARQAAVIVAARAAANAECG 139
+RWA L+ QAAVIVAA AAAN ECG
Sbjct 129 MRWADLSLPPQAAVIVAAAAAANNECG 155
>gi|41407111|ref|NP_959947.1| LpqV [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41395462|gb|AAS03330.1| LpqV [Mycobacterium avium subsp. paratuberculosis K-10]
Length=151
Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/91 (82%), Positives = 81/91 (90%), Gaps = 0/91 (0%)
Query 49 VGVSPAGVTTRVDAPAESTEEEYYQACHAARLWMDAQPGSGESLIEPYLAVVQASPSGVA 108
VG+SP GVTTRVD PA+STEEEYYQACHAA+ WMDAQP +G SL EPYLA+VQASPSG A
Sbjct 61 VGLSPGGVTTRVDIPADSTEEEYYQACHAAKEWMDAQPKTGASLFEPYLAMVQASPSGTA 120
Query 109 GSWHIRWAALTPARQAAVIVAARAAANAECG 139
GSW+ W+ALTPARQAAVIVAARAAAN ECG
Sbjct 121 GSWNTPWSALTPARQAAVIVAARAAANDECG 151
>gi|336461465|gb|EGO40335.1| hypothetical protein MAPs_30450 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=132
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/90 (82%), Positives = 80/90 (89%), Gaps = 0/90 (0%)
Query 49 VGVSPAGVTTRVDAPAESTEEEYYQACHAARLWMDAQPGSGESLIEPYLAVVQASPSGVA 108
VG+SP GVTTRVD PA+STEEEYYQACHAA+ WMDAQP +G SL EPYLA+VQASPSG A
Sbjct 42 VGLSPGGVTTRVDIPADSTEEEYYQACHAAKEWMDAQPKTGASLFEPYLAMVQASPSGTA 101
Query 109 GSWHIRWAALTPARQAAVIVAARAAANAEC 138
GSW+ W+ALTPARQAAVIVAARAAAN EC
Sbjct 102 GSWNTPWSALTPARQAAVIVAARAAANDEC 131
>gi|118467266|ref|YP_880437.1| LpqV protein [Mycobacterium avium 104]
gi|118168553|gb|ABK69450.1| LpqV protein [Mycobacterium avium 104]
Length=135
Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/91 (79%), Positives = 80/91 (88%), Gaps = 0/91 (0%)
Query 49 VGVSPAGVTTRVDAPAESTEEEYYQACHAARLWMDAQPGSGESLIEPYLAVVQASPSGVA 108
VG+SP GVTTR+D PA+STEEEYYQACHAA+ WMDAQP +G SL EPYL++VQASPSG A
Sbjct 45 VGLSPGGVTTRIDIPADSTEEEYYQACHAAKEWMDAQPKTGASLFEPYLSMVQASPSGTA 104
Query 109 GSWHIRWAALTPARQAAVIVAARAAANAECG 139
GSW+ W+AL PARQAAVIVAARAAAN ECG
Sbjct 105 GSWNTPWSALAPARQAAVIVAARAAANDECG 135
>gi|240170301|ref|ZP_04748960.1| putative lipoprotein [Mycobacterium kansasii ATCC 12478]
Length=84
Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/84 (80%), Positives = 76/84 (91%), Gaps = 0/84 (0%)
Query 56 VTTRVDAPAESTEEEYYQACHAARLWMDAQPGSGESLIEPYLAVVQASPSGVAGSWHIRW 115
+TTRVD PAESTEEEY+QACHAA++WM QPG+GE+LIEPYLA+VQ S SGVAGSW++RW
Sbjct 1 MTTRVDVPAESTEEEYFQACHAAKVWMQTQPGTGEALIEPYLAMVQTSHSGVAGSWNVRW 60
Query 116 AALTPARQAAVIVAARAAANAECG 139
A LTPARQAAVIVAA AAAN ECG
Sbjct 61 AELTPARQAAVIVAAVAAANNECG 84
>gi|118473319|ref|YP_889527.1| LpqV protein [Mycobacterium smegmatis str. MC2 155]
gi|118174606|gb|ABK75502.1| LpqV protein [Mycobacterium smegmatis str. MC2 155]
Length=156
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/98 (60%), Positives = 70/98 (72%), Gaps = 1/98 (1%)
Query 43 TLPAGVVGVSPAGVTTRVDAPAESTEEEYYQACHAARLWMDAQPGSGESLIEPYLAVVQA 102
T+ G VGVSP GVTT V APA+STEEEY+QACHAA++WMD + G + IEPYLA +QA
Sbjct 59 TVAPGEVGVSPGGVTTAVGAPAQSTEEEYFQACHAAKVWMDEKGGDPRAQIEPYLASLQA 118
Query 103 SPSGVA-GSWHIRWAALTPARQAAVIVAARAAANAECG 139
+ G++ WA L PARQAAVIVA AAA+ CG
Sbjct 119 PDAAPGPGTYDKTWAELEPARQAAVIVAVAAAADDMCG 156
>gi|145222620|ref|YP_001133298.1| hypothetical protein Mflv_2032 [Mycobacterium gilvum PYR-GCK]
gi|315443085|ref|YP_004075964.1| hypothetical protein Mspyr1_14560 [Mycobacterium sp. Spyr1]
gi|145215106|gb|ABP44510.1| hypothetical protein Mflv_2032 [Mycobacterium gilvum PYR-GCK]
gi|315261388|gb|ADT98129.1| hypothetical protein Mspyr1_14560 [Mycobacterium sp. Spyr1]
Length=145
Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/105 (56%), Positives = 72/105 (69%), Gaps = 2/105 (1%)
Query 37 SSSVAGTLPAGVV--GVSPAGVTTRVDAPAESTEEEYYQACHAARLWMDAQPGSGESLIE 94
SSS A T P G+SP GVTT V+APAESTE++Y+QAC AAR WMD Q G S IE
Sbjct 41 SSSEAVTTPGAPAAPGMSPDGVTTAVEAPAESTEDDYFQACRAARAWMDQQGGDPRSQIE 100
Query 95 PYLAVVQASPSGVAGSWHIRWAALTPARQAAVIVAARAAANAECG 139
PYL VQ+ + G++ RW+ L+P +Q+AVIVA AAA+A CG
Sbjct 101 PYLKTVQSEQTAGPGTFGERWSDLSPGQQSAVIVAVEAAADALCG 145
>gi|169628274|ref|YP_001701923.1| putative lipoprotein LpqV [Mycobacterium abscessus ATCC 19977]
gi|169240241|emb|CAM61269.1| Putative lipoprotein LpqV precursor [Mycobacterium abscessus]
Length=160
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/149 (43%), Positives = 78/149 (53%), Gaps = 16/149 (10%)
Query 3 PSRYAPLLCAMVLALAWLSAVAGCSRGGSSKAGRSSSV-AGTLPAGV-----------VG 50
P+R A L A + L A CS KA S SV AGT + G
Sbjct 16 PTRIAATLMACCVPLIG----AACSSASDDKAAPSPSVTAGTTTTSLGAPAAQPPAAGSG 71
Query 51 VSPAGVTTRVDAPAESTEEEYYQACHAARLWMDAQPGSGESLIEPYLAVVQASPSGVAGS 110
VSPAGVTT V+A S EEEYYQAC AA WM + + L+E YL +Q++ + G+
Sbjct 72 VSPAGVTTSVNAAPSSLEEEYYQACRAAADWMTGKHDGPDQLVEGYLQSIQSTGNIGPGT 131
Query 111 WHIRWAALTPARQAAVIVAARAAANAECG 139
+H W LT RQAAVIVA AAA +CG
Sbjct 132 FHKSWHELTADRQAAVIVATNAAAEQQCG 160
>gi|120405637|ref|YP_955466.1| LpqV [Mycobacterium vanbaalenii PYR-1]
gi|119958455|gb|ABM15460.1| LpqV [Mycobacterium vanbaalenii PYR-1]
Length=146
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/139 (49%), Positives = 83/139 (60%), Gaps = 14/139 (10%)
Query 12 AMVLALAWLSAVAGCSRGGSSKAGRSSSVAGTLPA-----------GVVGVSPAGVTTRV 60
A+V LA LS GCS G + S++ T A G V +SP GVTT V
Sbjct 11 AVVCVLALLS---GCSSGTDTPPASSATSVTTTAAEPPAAAAPVPPGEVAISPGGVTTAV 67
Query 61 DAPAESTEEEYYQACHAARLWMDAQPGSGESLIEPYLAVVQASPSGVAGSWHIRWAALTP 120
APAESTE++Y+QAC AAR WM+ + G S IEPYLA VQ++PS G++ W LTP
Sbjct 68 GAPAESTEDDYFQACLAARTWMEQRGGVARSQIEPYLASVQSAPSAGPGTFDRPWPELTP 127
Query 121 ARQAAVIVAARAAANAECG 139
QAAVIVA AAA+A CG
Sbjct 128 GEQAAVIVAVEAAADALCG 146
>gi|108801133|ref|YP_641330.1| protein LpqV [Mycobacterium sp. MCS]
gi|119870265|ref|YP_940217.1| protein LpqV [Mycobacterium sp. KMS]
gi|126436962|ref|YP_001072653.1| protein LpqV [Mycobacterium sp. JLS]
gi|108771552|gb|ABG10274.1| LpqV [Mycobacterium sp. MCS]
gi|119696354|gb|ABL93427.1| LpqV [Mycobacterium sp. KMS]
gi|126236762|gb|ABO00163.1| LpqV [Mycobacterium sp. JLS]
Length=149
Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/93 (55%), Positives = 65/93 (70%), Gaps = 0/93 (0%)
Query 47 GVVGVSPAGVTTRVDAPAESTEEEYYQACHAARLWMDAQPGSGESLIEPYLAVVQASPSG 106
G V VSP GVTT V APAESTE+EY+QAC+ AR WM + G ++ +EPYLA +Q + S
Sbjct 57 GAVEVSPGGVTTAVGAPAESTEDEYFQACNTARQWMAGRGGDLKAQLEPYLAELQGTDSA 116
Query 107 VAGSWHIRWAALTPARQAAVIVAARAAANAECG 139
G++ W+ L P RQ+AVIVAA AAA+ CG
Sbjct 117 GPGTFGTPWSKLPPGRQSAVIVAAEAAADELCG 149
>gi|156086502|ref|XP_001610660.1| hypothetical protein [Babesia bovis T2Bo]
gi|154797913|gb|EDO07092.1| conserved hypothetical protein [Babesia bovis]
Length=1141
Score = 33.9 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 16/57 (29%), Positives = 28/57 (50%), Gaps = 2/57 (3%)
Query 64 AESTEEEYYQACHAARLWMDAQPG--SGESLIEPYLAVVQASPSGVAGSWHIRWAAL 118
A ++ + CH ARL M + G S +P+L ++ +SP + WH+ A+
Sbjct 826 ATMADDSWVTVCHLARLAMQRRKELMDGTSTAKPFLFIIMSSPQHIFIRWHMELVAV 882
Lambda K H
0.315 0.126 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131443546824
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40