BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1068c
Length=463
Score E
Sequences producing significant alignments: (Bits) Value
gi|253799896|ref|YP_003032897.1| PE-PGRS family protein [Mycobac... 779 0.0
gi|57116819|ref|YP_177781.1| PE-PGRS family protein [Mycobacteri... 777 0.0
gi|148660853|ref|YP_001282376.1| PE-PGRS family protein [Mycobac... 776 0.0
gi|339294065|gb|AEJ46176.1| hypothetical protein CCDC5079_0986 [... 679 0.0
gi|339631132|ref|YP_004722774.1| PE-PGRS family protein [Mycobac... 237 3e-60
gi|340626079|ref|YP_004744531.1| PE-PGRS family protein [Mycobac... 236 6e-60
gi|121636997|ref|YP_977220.1| PE-PGRS family protein [Mycobacter... 234 2e-59
gi|31792259|ref|NP_854752.1| PE-PGRS family protein [Mycobacteri... 234 2e-59
gi|224989470|ref|YP_002644157.1| PE-PGRS family protein [Mycobac... 211 2e-52
gi|339297705|gb|AEJ49815.1| hypothetical protein CCDC5180_0978 [... 171 3e-40
gi|118619532|ref|YP_907864.1| PE-PGRS family protein [Mycobacter... 163 5e-38
gi|339631131|ref|YP_004722773.1| PE-PGRS family protein [Mycobac... 153 5e-35
gi|183982972|ref|YP_001851263.1| PE-PGRS family protein [Mycobac... 148 2e-33
gi|183985289|ref|YP_001853580.1| PE-PGRS family protein [Mycobac... 148 2e-33
gi|183984157|ref|YP_001852448.1| PE-PGRS family protein [Mycobac... 140 5e-31
gi|339296212|gb|AEJ48323.1| hypothetical protein CCDC5079_3134 [... 139 1e-30
gi|183981183|ref|YP_001849474.1| PE-PGRS family protein [Mycobac... 136 9e-30
gi|148824595|ref|YP_001289349.1| PE-PGRS family protein [Mycobac... 131 3e-28
gi|148663252|ref|YP_001284775.1| PE-PGRS family protein [Mycobac... 129 1e-27
gi|341603337|emb|CCC66018.1| PE-PGRS family protein [Mycobacteri... 129 1e-27
gi|148662430|ref|YP_001283953.1| PE-PGRS family protein [Mycobac... 129 1e-27
gi|57117101|ref|YP_177968.1| PE-PGRS family protein [Mycobacteri... 128 2e-27
gi|294994300|ref|ZP_06799991.1| PE-PGRS family protein [Mycobact... 128 2e-27
gi|340627608|ref|YP_004746060.1| PE-PGRS family protein [Mycobac... 128 2e-27
gi|289444130|ref|ZP_06433874.1| PE-PGRS family protein [Mycobact... 128 2e-27
gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobac... 127 3e-27
gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobac... 127 3e-27
gi|15842981|ref|NP_338018.1| PE_PGRS family protein [Mycobacteri... 127 4e-27
gi|339633393|ref|YP_004725035.1| PE-PGRS family protein [Mycobac... 127 5e-27
gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobac... 125 1e-26
gi|167967351|ref|ZP_02549628.1| PE_PGRS family protein [Mycobact... 125 2e-26
gi|57117098|ref|YP_177965.1| PE-PGRS family protein [Mycobacteri... 124 3e-26
gi|339299796|gb|AEJ51906.1| hypothetical protein CCDC5180_3069 [... 124 3e-26
gi|339296193|gb|AEJ48304.1| hypothetical protein CCDC5079_3115 [... 124 3e-26
gi|344221208|gb|AEN01839.1| PE-PGRS family protein [Mycobacteriu... 124 3e-26
gi|340628349|ref|YP_004746801.1| PE-PGRS family protein [Mycobac... 124 3e-26
gi|148663230|ref|YP_001284753.1| PE-PGRS family protein [Mycobac... 124 3e-26
gi|31794550|ref|NP_857043.1| PE-PGRS family protein [Mycobacteri... 124 3e-26
gi|15842963|ref|NP_338000.1| PE_PGRS family protein [Mycobacteri... 124 3e-26
gi|253800414|ref|YP_003033415.1| hypothetical protein TBMG_03418... 124 4e-26
gi|57116818|ref|YP_177780.1| PE-PGRS family protein [Mycobacteri... 124 4e-26
gi|340626078|ref|YP_004744530.1| PE-PGRS family protein [Mycobac... 123 8e-26
gi|183980600|ref|YP_001848891.1| PE-PGRS family protein [Mycobac... 122 1e-25
gi|341603451|emb|CCC66132.1| PE-PGRS family protein [Mycobacteri... 122 1e-25
gi|224991926|ref|YP_002646615.1| PE-PGRS family protein [Mycobac... 122 1e-25
gi|339633513|ref|YP_004725155.1| PE-PGRS family protein [Mycobac... 122 2e-25
gi|253800553|ref|YP_003033554.1| hypothetical protein TBMG_04114... 122 2e-25
gi|121639430|ref|YP_979654.1| PE-PGRS family protein [Mycobacter... 122 2e-25
gi|344221345|gb|AEN01976.1| PE-PGRS family protein [Mycobacteriu... 122 2e-25
gi|121637371|ref|YP_977594.1| PE-PGRS family protein [Mycobacter... 122 2e-25
>gi|253799896|ref|YP_003032897.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|289555149|ref|ZP_06444359.1| predicted protein [Mycobacterium tuberculosis KZN 605]
gi|253321399|gb|ACT26002.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|289439781|gb|EFD22274.1| predicted protein [Mycobacterium tuberculosis KZN 605]
gi|328459642|gb|AEB05065.1| hypothetical protein TBSG_02936 [Mycobacterium tuberculosis KZN
4207]
Length=469
Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/463 (100%), Positives = 463/463 (100%), Gaps = 0/463 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE
Sbjct 7 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 66
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA
Sbjct 67 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 126
Query 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 180
DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG
Sbjct 127 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 186
Query 181 NGGWLYGSGGNGGAGGAGPAGAIGAPGVAGGAGGAGGTAGLFGNGGAGGAGGAGGAGGRG 240
NGGWLYGSGGNGGAGGAGPAGAIGAPGVAGGAGGAGGTAGLFGNGGAGGAGGAGGAGGRG
Sbjct 187 NGGWLYGSGGNGGAGGAGPAGAIGAPGVAGGAGGAGGTAGLFGNGGAGGAGGAGGAGGRG 246
Query 241 GDGGSAGWLSGNGGDAGTGGGGGNAGNGGNGGSAGWLSGNGGTGGGGGTAGAGGQGGNGN 300
GDGGSAGWLSGNGGDAGTGGGGGNAGNGGNGGSAGWLSGNGGTGGGGGTAGAGGQGGNGN
Sbjct 247 GDGGSAGWLSGNGGDAGTGGGGGNAGNGGNGGSAGWLSGNGGTGGGGGTAGAGGQGGNGN 306
Query 301 SGIDPGNGGQGADTGNAGNGGHGGSAAKLFGDGGAGGAGGMGSTGGTGGGGGFGGGTGGN 360
SGIDPGNGGQGADTGNAGNGGHGGSAAKLFGDGGAGGAGGMGSTGGTGGGGGFGGGTGGN
Sbjct 307 SGIDPGNGGQGADTGNAGNGGHGGSAAKLFGDGGAGGAGGMGSTGGTGGGGGFGGGTGGN 366
Query 361 GGNGHAGGAGGSGGTAGLLGSGGSGGTGGDGGNGGLGAGSGAKGNGGNGGDGGKGGDAQL 420
GGNGHAGGAGGSGGTAGLLGSGGSGGTGGDGGNGGLGAGSGAKGNGGNGGDGGKGGDAQL
Sbjct 367 GGNGHAGGAGGSGGTAGLLGSGGSGGTGGDGGNGGLGAGSGAKGNGGNGGDGGKGGDAQL 426
Query 421 IGNGGNGGNGGKGGTGLMPGINGTGGAGGSRGQISGNPGTPGQ 463
IGNGGNGGNGGKGGTGLMPGINGTGGAGGSRGQISGNPGTPGQ
Sbjct 427 IGNGGNGGNGGKGGTGLMPGINGTGGAGGSRGQISGNPGTPGQ 469
>gi|57116819|ref|YP_177781.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148822277|ref|YP_001287031.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|6226412|sp|O53416.1|PG20_MYCTU RecName: Full=Uncharacterized PE-PGRS family protein PE_PGRS20
gi|41353641|emb|CAE55352.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|148720804|gb|ABR05429.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|344218895|gb|AEM99525.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=463
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/463 (100%), Positives = 463/463 (100%), Gaps = 0/463 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE
Sbjct 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA
Sbjct 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
Query 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 180
DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG
Sbjct 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 180
Query 181 NGGWLYGSGGNGGAGGAGPAGAIGAPGVAGGAGGAGGTAGLFGNGGAGGAGGAGGAGGRG 240
NGGWLYGSGGNGGAGGAGPAGAIGAPGVAGGAGGAGGTAGLFGNGGAGGAGGAGGAGGRG
Sbjct 181 NGGWLYGSGGNGGAGGAGPAGAIGAPGVAGGAGGAGGTAGLFGNGGAGGAGGAGGAGGRG 240
Query 241 GDGGSAGWLSGNGGDAGTGGGGGNAGNGGNGGSAGWLSGNGGTGGGGGTAGAGGQGGNGN 300
GDGGSAGWLSGNGGDAGTGGGGGNAGNGGNGGSAGWLSGNGGTGGGGGTAGAGGQGGNGN
Sbjct 241 GDGGSAGWLSGNGGDAGTGGGGGNAGNGGNGGSAGWLSGNGGTGGGGGTAGAGGQGGNGN 300
Query 301 SGIDPGNGGQGADTGNAGNGGHGGSAAKLFGDGGAGGAGGMGSTGGTGGGGGFGGGTGGN 360
SGIDPGNGGQGADTGNAGNGGHGGSAAKLFGDGGAGGAGGMGSTGGTGGGGGFGGGTGGN
Sbjct 301 SGIDPGNGGQGADTGNAGNGGHGGSAAKLFGDGGAGGAGGMGSTGGTGGGGGFGGGTGGN 360
Query 361 GGNGHAGGAGGSGGTAGLLGSGGSGGTGGDGGNGGLGAGSGAKGNGGNGGDGGKGGDAQL 420
GGNGHAGGAGGSGGTAGLLGSGGSGGTGGDGGNGGLGAGSGAKGNGGNGGDGGKGGDAQL
Sbjct 361 GGNGHAGGAGGSGGTAGLLGSGGSGGTGGDGGNGGLGAGSGAKGNGGNGGDGGKGGDAQL 420
Query 421 IGNGGNGGNGGKGGTGLMPGINGTGGAGGSRGQISGNPGTPGQ 463
IGNGGNGGNGGKGGTGLMPGINGTGGAGGSRGQISGNPGTPGQ
Sbjct 421 IGNGGNGGNGGKGGTGLMPGINGTGGAGGSRGQISGNPGTPGQ 463
>gi|148660853|ref|YP_001282376.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148505005|gb|ABQ72814.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=463
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/463 (99%), Positives = 462/463 (99%), Gaps = 0/463 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE
Sbjct 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA
Sbjct 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
Query 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 180
DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG
Sbjct 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 180
Query 181 NGGWLYGSGGNGGAGGAGPAGAIGAPGVAGGAGGAGGTAGLFGNGGAGGAGGAGGAGGRG 240
NGGWLYGSGGNGGAGGAGPAGAIGAPGVAGGAGGAGGTAGLFGNGGAGGAGGAGGA GRG
Sbjct 181 NGGWLYGSGGNGGAGGAGPAGAIGAPGVAGGAGGAGGTAGLFGNGGAGGAGGAGGAVGRG 240
Query 241 GDGGSAGWLSGNGGDAGTGGGGGNAGNGGNGGSAGWLSGNGGTGGGGGTAGAGGQGGNGN 300
GDGGSAGWLSGNGGDAGTGGGGGNAGNGGNGGSAGWLSGNGGTGGGGGTAGAGGQGGNGN
Sbjct 241 GDGGSAGWLSGNGGDAGTGGGGGNAGNGGNGGSAGWLSGNGGTGGGGGTAGAGGQGGNGN 300
Query 301 SGIDPGNGGQGADTGNAGNGGHGGSAAKLFGDGGAGGAGGMGSTGGTGGGGGFGGGTGGN 360
SGIDPGNGGQGADTGNAGNGGHGGSAAKLFGDGGAGGAGGMGSTGGTGGGGGFGGGTGGN
Sbjct 301 SGIDPGNGGQGADTGNAGNGGHGGSAAKLFGDGGAGGAGGMGSTGGTGGGGGFGGGTGGN 360
Query 361 GGNGHAGGAGGSGGTAGLLGSGGSGGTGGDGGNGGLGAGSGAKGNGGNGGDGGKGGDAQL 420
GGNGHAGGAGGSGGTAGLLGSGGSGGTGGDGGNGGLGAGSGAKGNGGNGGDGGKGGDAQL
Sbjct 361 GGNGHAGGAGGSGGTAGLLGSGGSGGTGGDGGNGGLGAGSGAKGNGGNGGDGGKGGDAQL 420
Query 421 IGNGGNGGNGGKGGTGLMPGINGTGGAGGSRGQISGNPGTPGQ 463
IGNGGNGGNGGKGGTGLMPGINGTGGAGGSRGQISGNPGTPGQ
Sbjct 421 IGNGGNGGNGGKGGTGLMPGINGTGGAGGSRGQISGNPGTPGQ 463
>gi|339294065|gb|AEJ46176.1| hypothetical protein CCDC5079_0986 [Mycobacterium tuberculosis
CCDC5079]
Length=417
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/417 (99%), Positives = 417/417 (100%), Gaps = 0/417 (0%)
Query 47 VSAHIAALFSGHGEGYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAP 106
+SAHIAALFSGHGEGYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAP
Sbjct 1 MSAHIAALFSGHGEGYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAP 60
Query 107 TQALLGRPLIGNGADGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGN 166
TQALLGRPLIGNGADGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGN
Sbjct 61 TQALLGRPLIGNGADGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGN 120
Query 167 GGAGGAGANGGAGGNGGWLYGSGGNGGAGGAGPAGAIGAPGVAGGAGGAGGTAGLFGNGG 226
GGAGGAGANGGAGGNGGWLYGSGGNGGAGGAGPAGAIGAPGVAGGAGGAGGTAGLFGNGG
Sbjct 121 GGAGGAGANGGAGGNGGWLYGSGGNGGAGGAGPAGAIGAPGVAGGAGGAGGTAGLFGNGG 180
Query 227 AGGAGGAGGAGGRGGDGGSAGWLSGNGGDAGTGGGGGNAGNGGNGGSAGWLSGNGGTGGG 286
AGGAGGAGGAGGRGGDGGSAGWLSGNGGDAGTGGGGGNAGNGGNGGSAGWLSGNGGTGGG
Sbjct 181 AGGAGGAGGAGGRGGDGGSAGWLSGNGGDAGTGGGGGNAGNGGNGGSAGWLSGNGGTGGG 240
Query 287 GGTAGAGGQGGNGNSGIDPGNGGQGADTGNAGNGGHGGSAAKLFGDGGAGGAGGMGSTGG 346
GGTAGAGGQGGNGNSGIDPGNGGQGADTGNAGNGGHGGSAAKLFGDGGAGGAGGMGSTGG
Sbjct 241 GGTAGAGGQGGNGNSGIDPGNGGQGADTGNAGNGGHGGSAAKLFGDGGAGGAGGMGSTGG 300
Query 347 TGGGGGFGGGTGGNGGNGHAGGAGGSGGTAGLLGSGGSGGTGGDGGNGGLGAGSGAKGNG 406
TGGGGGFGGGTGGNGGNGHAGGAGGSGGTAGLLGSGGSGGTGGDGGNGGLGAGSGAKGNG
Sbjct 301 TGGGGGFGGGTGGNGGNGHAGGAGGSGGTAGLLGSGGSGGTGGDGGNGGLGAGSGAKGNG 360
Query 407 GNGGDGGKGGDAQLIGNGGNGGNGGKGGTGLMPGINGTGGAGGSRGQISGNPGTPGQ 463
GNGGDGGKGGDAQLIGNGG+GGNGGKGGTGLMPGINGTGGAGGSRGQISGNPGTPGQ
Sbjct 361 GNGGDGGKGGDAQLIGNGGDGGNGGKGGTGLMPGINGTGGAGGSRGQISGNPGTPGQ 417
>gi|339631132|ref|YP_004722774.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339330488|emb|CCC26153.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=772
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 186/186 (100%), Positives = 186/186 (100%), Gaps = 0/186 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE
Sbjct 7 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 66
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA
Sbjct 67 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 126
Query 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 180
DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG
Sbjct 127 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 186
Query 181 NGGWLY 186
NGGWLY
Sbjct 187 NGGWLY 192
>gi|340626079|ref|YP_004744531.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004269|emb|CCC43410.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=767
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 185/186 (99%), Positives = 186/186 (100%), Gaps = 0/186 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE
Sbjct 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPL+GNGA
Sbjct 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLVGNGA 120
Query 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 180
DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG
Sbjct 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 180
Query 181 NGGWLY 186
NGGWLY
Sbjct 181 NGGWLY 186
>gi|121636997|ref|YP_977220.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121492644|emb|CAL71113.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|341601013|emb|CCC63685.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=730
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 185/186 (99%), Positives = 185/186 (99%), Gaps = 0/186 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE
Sbjct 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQAL GRPLIGNGA
Sbjct 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALWGRPLIGNGA 120
Query 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 180
DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG
Sbjct 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 180
Query 181 NGGWLY 186
NGGWLY
Sbjct 181 NGGWLY 186
>gi|31792259|ref|NP_854752.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31617847|emb|CAD93957.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=763
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 185/186 (99%), Positives = 185/186 (99%), Gaps = 0/186 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE
Sbjct 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQAL GRPLIGNGA
Sbjct 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALWGRPLIGNGA 120
Query 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 180
DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG
Sbjct 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 180
Query 181 NGGWLY 186
NGGWLY
Sbjct 181 NGGWLY 186
>gi|224989470|ref|YP_002644157.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|224772583|dbj|BAH25389.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length=401
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 176/177 (99%), Positives = 176/177 (99%), Gaps = 0/177 (0%)
Query 10 MLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGEGYQAIARQM 69
MLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGEGYQAIARQM
Sbjct 1 MLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGEGYQAIARQM 60
Query 70 AAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGADGTAANPNG 129
AAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQAL GRPLIGNGADGTAANPNG
Sbjct 61 AAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALWGRPLIGNGADGTAANPNG 120
Query 130 GAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGGNGGWLY 186
GAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGGNGGWLY
Sbjct 121 GAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGGNGGWLY 177
>gi|339297705|gb|AEJ49815.1| hypothetical protein CCDC5180_0978 [Mycobacterium tuberculosis
CCDC5180]
Length=484
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 139/140 (99%), Positives = 140/140 (100%), Gaps = 0/140 (0%)
Query 47 VSAHIAALFSGHGEGYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAP 106
+SAHIAALFSGHGEGYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAP
Sbjct 1 MSAHIAALFSGHGEGYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAP 60
Query 107 TQALLGRPLIGNGADGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGN 166
TQALLGRPLIGNGADGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGN
Sbjct 61 TQALLGRPLIGNGADGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGN 120
Query 167 GGAGGAGANGGAGGNGGWLY 186
GGAGGAGANGGAGGNGGWLY
Sbjct 121 GGAGGAGANGGAGGNGGWLY 140
>gi|118619532|ref|YP_907864.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
gi|118571642|gb|ABL06393.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
Length=480
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/153 (59%), Positives = 112/153 (74%), Gaps = 6/153 (3%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MSY++ P++L+SAA DL I S+++ + AAA TT +L A ADEVSA +A+LF+G+G+
Sbjct 1 MSYLLVAPELLTSAATDLEGIASALSTANLAAAVPTTGMLAAGADEVSAAVASLFAGYGQ 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATN------VEQQVLGLINAPTQALLGRP 114
YQ+I+ Q AF QF A+ + GAY +AEA + E VLG+INAPTQ LLGRP
Sbjct 61 AYQSISLQANAFQAQFIQAINGAGGAYVAAEAASTSPLQAFEDTVLGVINAPTQTLLGRP 120
Query 115 LIGNGADGTAANPNGGAGGLLYGNGGNGFSQTT 147
LIG+GA GT ANPNGGAGG LYGNGGNGFSQTT
Sbjct 121 LIGDGAAGTVANPNGGAGGFLYGNGGNGFSQTT 153
>gi|339631131|ref|YP_004722773.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339330487|emb|CCC26152.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=672
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 141/186 (76%), Positives = 155/186 (84%), Gaps = 0/186 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MS+++ P L +AA D+A IGS+I+A+ AA A T+ L A ADEVSA +AALFS H
Sbjct 1 MSFVLVSPSQLMAAAADVAGIGSAISAANAAALAPTSVLAAAGADEVSAAVAALFSAHAG 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
YQ + + A FH+QF ALT +A AYASAEATNVEQQVLGLINAPTQAL GRPLIGNGA
Sbjct 61 QYQQLGARAALFHEQFVQALTGAASAYASAEATNVEQQVLGLINAPTQALWGRPLIGNGA 120
Query 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 180
DGTAANPNGGAGGLLY NGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG
Sbjct 121 DGTAANPNGGAGGLLYSNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 180
Query 181 NGGWLY 186
NGGWLY
Sbjct 181 NGGWLY 186
>gi|183982972|ref|YP_001851263.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183176298|gb|ACC41408.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=609
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/153 (61%), Positives = 121/153 (80%), Gaps = 6/153 (3%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
M+Y++ VP +++AAG+LA+IGSSI ++ AAAA TT L A ADE+SA IA LF H +
Sbjct 1 MTYLVTVPQTVATAAGNLAAIGSSITDASAAAAAPTTELAAAGADEISAAIAQLFGTHAQ 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATN------VEQQVLGLINAPTQALLGRP 114
YQ I+ Q AFHDQF +L++++G+YA+AEATN V+Q +LGL+NAPTQALLGRP
Sbjct 61 IYQRISAQAMAFHDQFARSLSAASGSYANAEATNTLTLQSVQQDLLGLVNAPTQALLGRP 120
Query 115 LIGNGADGTAANPNGGAGGLLYGNGGNGFSQTT 147
LIGNGA+GTAA+PNG AGGLLYGNGG+G+S T+
Sbjct 121 LIGNGANGTAADPNGEAGGLLYGNGGDGYSFTS 153
>gi|183985289|ref|YP_001853580.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178615|gb|ACC43725.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=723
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/161 (55%), Positives = 108/161 (68%), Gaps = 22/161 (13%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MSY++ P++L+SAA DL I S+++ + AAA TT +L A ADEVSA +A+LF+G+G+
Sbjct 1 MSYLLVTPELLTSAATDLEGIASALSTANLAAAVPTTGVLAAGADEVSAAVASLFAGYGQ 60
Query 61 GYQAIARQMAAFHDQFTLAL--------------TSSAGAYASAEATNVEQQVLGLINAP 106
YQ+I+ Q AF QF A+ TS A+ E VLG+INAP
Sbjct 61 AYQSISLQANAFQAQFIQAINGAGGAYAAAEAASTSPLQAF--------EDTVLGVINAP 112
Query 107 TQALLGRPLIGNGADGTAANPNGGAGGLLYGNGGNGFSQTT 147
TQ LLGRPLIG+GA GTAANPNGGAGG LYGNGGNGFSQTT
Sbjct 113 TQTLLGRPLIGDGAAGTAANPNGGAGGFLYGNGGNGFSQTT 153
>gi|183984157|ref|YP_001852448.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183177483|gb|ACC42593.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=683
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/152 (63%), Positives = 114/152 (75%), Gaps = 6/152 (3%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
M+Y+ PDML+ AAGDL IGS + A+ AA TT +L A ADEVSA IAA+FSGHG+
Sbjct 1 MAYLTVFPDMLAGAAGDLVGIGSQLAAANTAAIGPTTTVLAAGADEVSAAIAAVFSGHGQ 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATN------VEQQVLGLINAPTQALLGRP 114
YQ ++ Q+AAFH +F AL + A +Y AEA N +EQ LG+INAPTQAL+GRP
Sbjct 61 AYQVLSAQVAAFHQRFVEALNAGAQSYVGAEAANATPLQTLEQDALGIINAPTQALVGRP 120
Query 115 LIGNGADGTAANPNGGAGGLLYGNGGNGFSQT 146
LIGNGA+GTAANPNGG GGLLYGNGGNGF+QT
Sbjct 121 LIGNGANGTAANPNGGDGGLLYGNGGNGFTQT 152
>gi|339296212|gb|AEJ48323.1| hypothetical protein CCDC5079_3134 [Mycobacterium tuberculosis
CCDC5079]
Length=731
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/186 (66%), Positives = 145/186 (78%), Gaps = 0/186 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MS++IA P+ML++AA DLA I S+I+A+T AAAA T ++ A ADEVS I+ALF H +
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
YQA++ Q FHDQF ALTS YA+AE+ VEQ VL INAPTQ L GRPLIG+GA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 180
+GTA NP+G GGLL+GNGGNGF+QTTAG+ GG GGSAGLIGNGG GG GGAGA GG+GG
Sbjct 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGSGG 180
Query 181 NGGWLY 186
NGGWLY
Sbjct 181 NGGWLY 186
>gi|183981183|ref|YP_001849474.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174509|gb|ACC39619.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=594
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/142 (57%), Positives = 103/142 (73%), Gaps = 6/142 (4%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MSY++A PD +++AA + +IG +++A+ A A TT +L AAADE+S +A++FS H
Sbjct 1 MSYVLAAPDAMATAASSVTNIGGALSAANAMATAPTTGVLAAAADEISVAMASVFSDHAL 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATN------VEQQVLGLINAPTQALLGRP 114
YQ +A +MAAFHDQF AL S AGAY +AE N +EQ++L INAPTQ LLGRP
Sbjct 61 SYQQVAARMAAFHDQFVAALHSGAGAYLTAETANASPLGTLEQRLLQAINAPTQTLLGRP 120
Query 115 LIGNGADGTAANPNGGAGGLLY 136
LIG+GA GTA NPNGGAGGLLY
Sbjct 121 LIGDGAAGTATNPNGGAGGLLY 142
>gi|148824595|ref|YP_001289349.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148723122|gb|ABR07747.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
Length=731
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/157 (62%), Positives = 119/157 (76%), Gaps = 0/157 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MS++IA P+ML++AA DLA I S+I+A+T AAAA T ++ A ADEVS I+ALF H +
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
YQA++ Q FHDQF ALTS YA+AE+ VEQ VL INAPTQ L GRPLIG+GA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGS 157
+GTA NP+G GGLL+GNGGNGF+QTTAG+ GG GGS
Sbjct 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGS 157
>gi|148663252|ref|YP_001284775.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148507404|gb|ABQ75213.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=582
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/157 (62%), Positives = 119/157 (76%), Gaps = 0/157 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MS++IA P+ML++AA DLA I S+I+A+T AAAA T ++ A ADEVS I+ALF H +
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
YQA++ Q FHDQF ALTS YA+AE+ VEQ VL INAPTQ L GRPLIG+GA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGS 157
+GTA NP+G GGLL+GNGGNGF+QTTAG+ GG GGS
Sbjct 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGS 157
>gi|341603337|emb|CCC66018.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=750
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/157 (62%), Positives = 119/157 (76%), Gaps = 0/157 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MS++IA P+ML++AA DLA I S+I+A+T AAAA T ++ A ADEVS I+ALF H +
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
YQA++ Q FHDQF ALTS YA+AE+ VEQ VL INAPTQ L GRPLIG+GA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGS 157
+GTA NP+G GGLL+GNGGNGF+QTTAG+ GG GGS
Sbjct 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGS 157
>gi|148662430|ref|YP_001283953.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|253798327|ref|YP_003031328.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|148506582|gb|ABQ74391.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|253319830|gb|ACT24433.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|328458097|gb|AEB03520.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=553
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/152 (56%), Positives = 111/152 (74%), Gaps = 5/152 (3%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MS++ A P+ML++AA ++A+IG+S++A+ AAA+TT +L A ADEVS IA LFS +
Sbjct 11 MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT 70
Query 61 GYQAIARQMAAFHDQFTLALTSS-----AGAYASAEATNVEQQVLGLINAPTQALLGRPL 115
YQ++ Q AAFH F L ++ + A+A A +EQ +L +INAP QAL GRPL
Sbjct 71 HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQNLLAVINAPAQALFGRPL 130
Query 116 IGNGADGTAANPNGGAGGLLYGNGGNGFSQTT 147
IGNGA+GTAA+PNGG GG+LYGNGGNGFSQTT
Sbjct 131 IGNGANGTAASPNGGDGGILYGNGGNGFSQTT 162
>gi|57117101|ref|YP_177968.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|253800434|ref|YP_003033435.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|7441235|pir||C70974 hypothetical glycine-rich protein Rv3388 - Mycobacterium tuberculosis
(strain H37RV)
gi|38490366|emb|CAE55593.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|253321937|gb|ACT26540.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|328460166|gb|AEB05589.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
gi|344221227|gb|AEN01858.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=731
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/157 (62%), Positives = 119/157 (76%), Gaps = 0/157 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MS++IA P+ML++AA DLA I S+I+A+T AAAA T ++ A ADEVS I+ALF H +
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
YQA++ Q FHDQF ALTS YA+AE+ VEQ VL INAPTQ L GRPLIG+GA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGS 157
+GTA NP+G GGLL+GNGGNGF+QTTAG+ GG GGS
Sbjct 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGS 157
>gi|294994300|ref|ZP_06799991.1| PE-PGRS family protein [Mycobacterium tuberculosis 210]
Length=543
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/152 (56%), Positives = 111/152 (74%), Gaps = 5/152 (3%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MS++ A P+ML++AA ++A+IG+S++A+ AAA+TT +L A ADEVS IA LFS +
Sbjct 1 MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT 60
Query 61 GYQAIARQMAAFHDQFTLALTSS-----AGAYASAEATNVEQQVLGLINAPTQALLGRPL 115
YQ++ Q AAFH F L ++ + A+A A +EQ +L +INAP QAL GRPL
Sbjct 61 HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQNLLAVINAPAQALFGRPL 120
Query 116 IGNGADGTAANPNGGAGGLLYGNGGNGFSQTT 147
IGNGA+GTAA+PNGG GG+LYGNGGNGFSQTT
Sbjct 121 IGNGANGTAASPNGGDGGILYGNGGNGFSQTT 152
>gi|340627608|ref|YP_004746060.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340005798|emb|CCC44964.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=546
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/152 (56%), Positives = 111/152 (74%), Gaps = 5/152 (3%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MS++ A P+ML++AA ++A+IG+S++A+ AAA+TT +L A ADEVS IA LFS +
Sbjct 1 MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT 60
Query 61 GYQAIARQMAAFHDQFTLALTSS-----AGAYASAEATNVEQQVLGLINAPTQALLGRPL 115
YQ++ Q AAFH F L ++ + A+A A +EQ +L +INAP QAL GRPL
Sbjct 61 HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQNLLAVINAPAQALFGRPL 120
Query 116 IGNGADGTAANPNGGAGGLLYGNGGNGFSQTT 147
IGNGA+GTAA+PNGG GG+LYGNGGNGFSQTT
Sbjct 121 IGNGANGTAASPNGGDGGILYGNGGNGFSQTT 152
>gi|289444130|ref|ZP_06433874.1| PE-PGRS family protein [Mycobacterium tuberculosis T46]
gi|289417049|gb|EFD14289.1| PE-PGRS family protein [Mycobacterium tuberculosis T46]
Length=543
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/152 (56%), Positives = 111/152 (74%), Gaps = 5/152 (3%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MS++ A P+ML++AA ++A+IG+S++A+ AAA+TT +L A ADEVS IA LFS +
Sbjct 1 MSFVTAAPEMLATAAQNVANIGTSLSAANATAAASTTSVLAAGADEVSQAIARLFSDYAT 60
Query 61 GYQAIARQMAAFHDQFTLALTSS-----AGAYASAEATNVEQQVLGLINAPTQALLGRPL 115
YQ++ Q AAFH F L ++ + A+A A +EQ +L +INAP QAL GRPL
Sbjct 61 HYQSLNAQAAAFHHSFVQTLNAAGGAYSSAEAANASAQALEQNLLAVINAPAQALFGRPL 120
Query 116 IGNGADGTAANPNGGAGGLLYGNGGNGFSQTT 147
IGNGA+GTAA+PNGG GG+LYGNGGNGFSQTT
Sbjct 121 IGNGANGTAASPNGGDGGILYGNGGNGFSQTT 152
>gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174556|gb|ACC39666.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=963
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/123 (56%), Positives = 89/123 (73%), Gaps = 2/123 (1%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
M++++ P+M+++AA DLA+IGS+IN + A AA T LL A DEVS IA+LFSGH
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAE--ATNVEQQVLGLINAPTQALLGRPLIGN 118
YQ++ +M AFHDQF ALT+ G Y+SAE A Q +L ++NAPTQALLGRPLIG+
Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD 120
Query 119 GAD 121
GAD
Sbjct 121 GAD 123
>gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174555|gb|ACC39665.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=946
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/124 (56%), Positives = 91/124 (74%), Gaps = 4/124 (3%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
M++++ P+M+++AA DLA+IGS+IN + A AA T LL A DEVS IA+LFSGH
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAE---ATNVEQQVLGLINAPTQALLGRPLIG 117
YQ++ +M AFHDQF ALT+ G Y+SAE AT + Q +L ++NAPTQALLGRPLIG
Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPL-QDLLNVVNAPTQALLGRPLIG 119
Query 118 NGAD 121
+GAD
Sbjct 120 DGAD 123
>gi|15842981|ref|NP_338018.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13883320|gb|AAK47832.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=775
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/157 (62%), Positives = 119/157 (76%), Gaps = 0/157 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MS++IA P+ML++AA DLA I S+I+A+T AAAA T ++ A ADEVS I+ALF H +
Sbjct 45 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 104
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
YQA++ Q FHDQF ALTS YA+AE+ VEQ VL INAPTQ L GRPLIG+GA
Sbjct 105 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 164
Query 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGS 157
+GTA NP+G GGLL+GNGGNGF+QTTAG+ GG GGS
Sbjct 165 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGS 201
>gi|339633393|ref|YP_004725035.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339332749|emb|CCC28470.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=724
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/157 (62%), Positives = 119/157 (76%), Gaps = 0/157 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MS++IA P+ML++AA DLA I S+I+A+T AAAA T ++ A ADEVS I+ALF H +
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
YQA++ Q FHDQF ALTS YA+AE+ VEQ VL INAPTQ L GRPLIG+GA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGS 157
+GTA NP+G GGLL+GNGGNGF+QTTAG+ GG GGS
Sbjct 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGS 157
>gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183176632|gb|ACC41742.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=965
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/124 (56%), Positives = 90/124 (73%), Gaps = 4/124 (3%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
M++++ P+M+++AA DLA+IGS+IN + A AA T LL A DEVS IA+LFSGH
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAE---ATNVEQQVLGLINAPTQALLGRPLIG 117
YQ + +M AFHDQF ALT+ G Y+SAE AT + Q +L ++NAPTQALLGRPLIG
Sbjct 61 DYQNLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPL-QDLLNVVNAPTQALLGRPLIG 119
Query 118 NGAD 121
+GAD
Sbjct 120 DGAD 123
>gi|167967351|ref|ZP_02549628.1| PE_PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=591
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/99 (64%), Positives = 76/99 (77%), Gaps = 0/99 (0%)
Query 45 DEVSAHIAALFSGHGEGYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLIN 104
DEVSA +A+LFSGH YQ +A Q A HDQF ALT + G+YA EA NV+Q +L IN
Sbjct 45 DEVSAALASLFSGHAVSYQQVAAQATALHDQFVQALTGAGGSYALTEAANVQQNLLNAIN 104
Query 105 APTQALLGRPLIGNGADGTAANPNGGAGGLLYGNGGNGF 143
APTQALLGRPLIG+GA GTA++P+G GGLL+GNGG G+
Sbjct 105 APTQALLGRPLIGDGAVGTASSPDGQDGGLLFGNGGAGY 143
>gi|57117098|ref|YP_177965.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|7476149|pir||F70971 hypothetical glycine-rich protein Rv3367 - Mycobacterium tuberculosis
(strain H37RV)
gi|38490363|emb|CAE55590.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=588
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/99 (64%), Positives = 76/99 (77%), Gaps = 0/99 (0%)
Query 45 DEVSAHIAALFSGHGEGYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLIN 104
DEVSA +A+LFSGH YQ +A Q A HDQF ALT + G+YA EA NV+Q +L IN
Sbjct 45 DEVSAALASLFSGHAVSYQQVAAQATALHDQFVQALTGAGGSYALTEAANVQQNLLNAIN 104
Query 105 APTQALLGRPLIGNGADGTAANPNGGAGGLLYGNGGNGF 143
APTQALLGRPLIG+GA GTA++P+G GGLL+GNGG G+
Sbjct 105 APTQALLGRPLIGDGAVGTASSPDGQDGGLLFGNGGAGY 143
>gi|339299796|gb|AEJ51906.1| hypothetical protein CCDC5180_3069 [Mycobacterium tuberculosis
CCDC5180]
Length=589
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/99 (64%), Positives = 76/99 (77%), Gaps = 0/99 (0%)
Query 45 DEVSAHIAALFSGHGEGYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLIN 104
DEVSA +A+LFSGH YQ +A Q A HDQF ALT + G+YA EA NV+Q +L IN
Sbjct 46 DEVSAALASLFSGHAVSYQQVAAQATALHDQFVQALTGAGGSYALTEAANVQQNLLNAIN 105
Query 105 APTQALLGRPLIGNGADGTAANPNGGAGGLLYGNGGNGF 143
APTQALLGRPLIG+GA GTA++P+G GGLL+GNGG G+
Sbjct 106 APTQALLGRPLIGDGAVGTASSPDGQDGGLLFGNGGAGY 144
>gi|339296193|gb|AEJ48304.1| hypothetical protein CCDC5079_3115 [Mycobacterium tuberculosis
CCDC5079]
Length=592
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/99 (64%), Positives = 76/99 (77%), Gaps = 0/99 (0%)
Query 45 DEVSAHIAALFSGHGEGYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLIN 104
DEVSA +A+LFSGH YQ +A Q A HDQF ALT + G+YA EA NV+Q +L IN
Sbjct 46 DEVSAALASLFSGHAVSYQQVAAQATALHDQFVQALTGAGGSYALTEAANVQQNLLNAIN 105
Query 105 APTQALLGRPLIGNGADGTAANPNGGAGGLLYGNGGNGF 143
APTQALLGRPLIG+GA GTA++P+G GGLL+GNGG G+
Sbjct 106 APTQALLGRPLIGDGAVGTASSPDGQDGGLLFGNGGAGY 144
>gi|344221208|gb|AEN01839.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=588
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/99 (64%), Positives = 76/99 (77%), Gaps = 0/99 (0%)
Query 45 DEVSAHIAALFSGHGEGYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLIN 104
DEVSA +A+LFSGH YQ +A Q A HDQF ALT + G+YA EA NV+Q +L IN
Sbjct 45 DEVSAALASLFSGHAVSYQQVAAQATALHDQFVQALTGAGGSYALTEAANVQQNLLNAIN 104
Query 105 APTQALLGRPLIGNGADGTAANPNGGAGGLLYGNGGNGF 143
APTQALLGRPLIG+GA GTA++P+G GGLL+GNGG G+
Sbjct 105 APTQALLGRPLIGDGAVGTASSPDGQDGGLLFGNGGAGY 143
>gi|340628349|ref|YP_004746801.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340006539|emb|CCC45724.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=594
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/99 (64%), Positives = 76/99 (77%), Gaps = 0/99 (0%)
Query 45 DEVSAHIAALFSGHGEGYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLIN 104
DEVSA +A+LFSGH YQ +A Q A HDQF ALT + G+YA EA NV+Q +L IN
Sbjct 45 DEVSAALASLFSGHAVSYQQVAAQATALHDQFVQALTGAGGSYALTEAANVQQNLLNAIN 104
Query 105 APTQALLGRPLIGNGADGTAANPNGGAGGLLYGNGGNGF 143
APTQALLGRPLIG+GA GTA++P+G GGLL+GNGG G+
Sbjct 105 APTQALLGRPLIGDGAVGTASSPDGQDGGLLFGNGGAGY 143
>gi|148663230|ref|YP_001284753.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148824576|ref|YP_001289330.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|297636027|ref|ZP_06953807.1| PE_PGRS family protein [Mycobacterium tuberculosis KZN 4207]
gi|148507382|gb|ABQ75191.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148723103|gb|ABR07728.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
Length=591
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/99 (64%), Positives = 76/99 (77%), Gaps = 0/99 (0%)
Query 45 DEVSAHIAALFSGHGEGYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLIN 104
DEVSA +A+LFSGH YQ +A Q A HDQF ALT + G+YA EA NV+Q +L IN
Sbjct 45 DEVSAALASLFSGHAVSYQQVAAQATALHDQFVQALTGAGGSYALTEAANVQQNLLNAIN 104
Query 105 APTQALLGRPLIGNGADGTAANPNGGAGGLLYGNGGNGF 143
APTQALLGRPLIG+GA GTA++P+G GGLL+GNGG G+
Sbjct 105 APTQALLGRPLIGDGAVGTASSPDGQDGGLLFGNGGAGY 143
>gi|31794550|ref|NP_857043.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31620146|emb|CAD95560.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=626
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/99 (64%), Positives = 76/99 (77%), Gaps = 0/99 (0%)
Query 45 DEVSAHIAALFSGHGEGYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLIN 104
DEVSA +A+LFSGH YQ +A Q A HDQF ALT + G+YA EA NV+Q +L IN
Sbjct 45 DEVSAALASLFSGHAVSYQQVAAQATALHDQFVQALTGAGGSYALTEAANVQQNLLNAIN 104
Query 105 APTQALLGRPLIGNGADGTAANPNGGAGGLLYGNGGNGF 143
APTQALLGRPLIG+GA GTA++P+G GGLL+GNGG G+
Sbjct 105 APTQALLGRPLIGDGAVGTASSPDGQDGGLLFGNGGAGY 143
>gi|15842963|ref|NP_338000.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13883301|gb|AAK47814.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=628
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/99 (64%), Positives = 76/99 (77%), Gaps = 0/99 (0%)
Query 45 DEVSAHIAALFSGHGEGYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLIN 104
DEVSA +A+LFSGH YQ +A Q A HDQF ALT + G+YA EA NV+Q +L IN
Sbjct 82 DEVSAALASLFSGHAVSYQQVAAQATALHDQFVQALTGAGGSYALTEAANVQQNLLNAIN 141
Query 105 APTQALLGRPLIGNGADGTAANPNGGAGGLLYGNGGNGF 143
APTQALLGRPLIG+GA GTA++P+G GGLL+GNGG G+
Sbjct 142 APTQALLGRPLIGDGAVGTASSPDGQDGGLLFGNGGAGY 180
>gi|253800414|ref|YP_003033415.1| hypothetical protein TBMG_03418 [Mycobacterium tuberculosis KZN
1435]
gi|253321917|gb|ACT26520.1| predicted protein [Mycobacterium tuberculosis KZN 1435]
gi|328460147|gb|AEB05570.1| hypothetical protein TBSG_03441 [Mycobacterium tuberculosis KZN
4207]
Length=625
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/99 (64%), Positives = 76/99 (77%), Gaps = 0/99 (0%)
Query 45 DEVSAHIAALFSGHGEGYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLIN 104
DEVSA +A+LFSGH YQ +A Q A HDQF ALT + G+YA EA NV+Q +L IN
Sbjct 79 DEVSAALASLFSGHAVSYQQVAAQATALHDQFVQALTGAGGSYALTEAANVQQNLLNAIN 138
Query 105 APTQALLGRPLIGNGADGTAANPNGGAGGLLYGNGGNGF 143
APTQALLGRPLIG+GA GTA++P+G GGLL+GNGG G+
Sbjct 139 APTQALLGRPLIGDGAVGTASSPDGQDGGLLFGNGGAGY 177
>gi|57116818|ref|YP_177780.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148660852|ref|YP_001282375.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|7446015|pir||A70893 hypothetical glycine-rich protein Rv1067c - Mycobacterium tuberculosis
(strain H37RV)
gi|41353640|emb|CAE55351.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|148505004|gb|ABQ72813.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=667
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 143/186 (77%), Positives = 157/186 (85%), Gaps = 0/186 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MS+++ P L +AA D+A IGS+I+A+ AA A T+ L A ADEVSA +AALFS H
Sbjct 1 MSFVLVSPSQLMAAAADVAGIGSAISAANAAALAPTSVLAAAGADEVSAAVAALFSAHAG 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
YQ + + A FH+QF ALT +A AYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA
Sbjct 61 QYQQLGARAALFHEQFVQALTGAASAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
Query 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 180
DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG
Sbjct 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 180
Query 181 NGGWLY 186
NGGWLY
Sbjct 181 NGGWLY 186
>gi|340626078|ref|YP_004744530.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004268|emb|CCC43409.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=673
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 143/186 (77%), Positives = 157/186 (85%), Gaps = 0/186 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MS+++ P L +AA D+A IGS+I+A+ AA A T+ L A ADEVSA +AALFS H
Sbjct 1 MSFVLVSPSQLMAAAADVAGIGSAISAANAAALAPTSVLAAAGADEVSAAVAALFSAHAG 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
YQ + + A FH+QF ALT +A AYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA
Sbjct 61 QYQQLGARAALFHEQFVQALTGAASAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
Query 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 180
DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG
Sbjct 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 180
Query 181 NGGWLY 186
NGGWLY
Sbjct 181 NGGWLY 186
>gi|183980600|ref|YP_001848891.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183173926|gb|ACC39036.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=489
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/121 (64%), Positives = 94/121 (78%), Gaps = 0/121 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MS+++ VP+MLS AA DLAS+GS+++A+ AAAA TT +L AA DEVSA +AALFS H
Sbjct 1 MSFVVVVPEMLSMAATDLASVGSAVSAANTAAAAPTTSVLAAAGDEVSAAVAALFSDHAH 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
YQA+ RQ AAFHDQF AL++ G Y +AE NV+Q +L LIN PTQALLGRPLIGNGA
Sbjct 61 NYQALGRQAAAFHDQFVAALSAGGGGYGAAETANVQQSLLNLINGPTQALLGRPLIGNGA 120
Query 121 D 121
D
Sbjct 121 D 121
>gi|341603451|emb|CCC66132.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=1695
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/123 (61%), Positives = 99/123 (81%), Gaps = 0/123 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MS+++ P+++S+AAGDLA++GS+I+A+ +AAAAATT++L A ADEVSA IAALF +G
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
YQAI+ Q+AA+H QF L + A +Y AEATNVEQ +L LINAPTQ LLGRPLIG+GA
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120
Query 121 DGT 123
+ T
Sbjct 121 NAT 123
>gi|224991926|ref|YP_002646615.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|224775041|dbj|BAH27847.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length=1695
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/123 (61%), Positives = 99/123 (81%), Gaps = 0/123 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MS+++ P+++S+AAGDLA++GS+I+A+ +AAAAATT++L A ADEVSA IAALF +G
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
YQAI+ Q+AA+H QF L + A +Y AEATNVEQ +L LINAPTQ LLGRPLIG+GA
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120
Query 121 DGT 123
+ T
Sbjct 121 NAT 123
>gi|339633513|ref|YP_004725155.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339332869|emb|CCC28593.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1817
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/123 (61%), Positives = 99/123 (81%), Gaps = 0/123 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MS+++ P+++S+AAGDLA++GS+I+A+ +AAAAATT++L A ADEVSA IAALF +G
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
YQAI+ Q+AA+H QF L + A +Y AEATNVEQ +L LINAPTQ LLGRPLIG+GA
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120
Query 121 DGT 123
+ T
Sbjct 121 NAT 123
>gi|253800553|ref|YP_003033554.1| hypothetical protein TBMG_04114 [Mycobacterium tuberculosis KZN
1435]
gi|253322056|gb|ACT26659.1| predicted protein [Mycobacterium tuberculosis KZN 1435]
gi|328460284|gb|AEB05707.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=1767
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/123 (61%), Positives = 99/123 (81%), Gaps = 0/123 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MS+++ P+++S+AAGDLA++GS+I+A+ +AAAAATT++L A ADEVSA IAALF +G
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
YQAI+ Q+AA+H QF L + A +Y AEATNVEQ +L LINAPTQ LLGRPLIG+GA
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120
Query 121 DGT 123
+ T
Sbjct 121 NAT 123
>gi|121639430|ref|YP_979654.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121495078|emb|CAL73564.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
Length=1810
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/123 (61%), Positives = 99/123 (81%), Gaps = 0/123 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MS+++ P+++S+AAGDLA++GS+I+A+ +AAAAATT++L A ADEVSA IAALF +G
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
YQAI+ Q+AA+H QF L + A +Y AEATNVEQ +L LINAPTQ LLGRPLIG+GA
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120
Query 121 DGT 123
+ T
Sbjct 121 NAT 123
>gi|344221345|gb|AEN01976.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1787
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/123 (61%), Positives = 99/123 (81%), Gaps = 0/123 (0%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MS+++ P+++S+AAGDLA++GS+I+A+ +AAAAATT++L A ADEVSA IAALF +G
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 120
YQAI+ Q+AA+H QF L + A +Y AEATNVEQ +L LINAPTQ LLGRPLIG+GA
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120
Query 121 DGT 123
+ T
Sbjct 121 NAT 123
>gi|121637371|ref|YP_977594.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224989846|ref|YP_002644533.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121493018|emb|CAL71489.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224772959|dbj|BAH25765.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601390|emb|CCC64063.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=491
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/128 (58%), Positives = 92/128 (72%), Gaps = 6/128 (4%)
Query 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
MS ++ VP MLS+AA D+ASIG++++A+ AAA T +L A ADEVSA IA+LFSG+
Sbjct 1 MSNVMVVPGMLSAAAADVASIGAALSAANGAAAPTTAGVLAAGADEVSAAIASLFSGYAR 60
Query 61 GYQAIARQMAAFHDQFTLALTSSAGAY------ASAEATNVEQQVLGLINAPTQALLGRP 114
YQA++ QMA FH QF ALT+S G+Y ++ +EQQVL INAPTQ LLGRP
Sbjct 61 DYQALSAQMARFHQQFVQALTASVGSYAAAEAANASPLQALEQQVLAAINAPTQTLLGRP 120
Query 115 LIGNGADG 122
LIGNGADG
Sbjct 121 LIGNGADG 128
Lambda K H
0.306 0.138 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 973451812480
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40