BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1069c Length=587 Score E Sequences producing significant alignments: (Bits) Value gi|15608209|ref|NP_215585.1| hypothetical protein Rv1069c [Mycob... 1187 0.0 gi|340626080|ref|YP_004744532.1| hypothetical protein MCAN_10751... 1184 0.0 gi|121636998|ref|YP_977221.1| hypothetical protein BCG_1127c [My... 1184 0.0 gi|289442496|ref|ZP_06432240.1| conserved hypothetical protein [... 1183 0.0 gi|289446655|ref|ZP_06436399.1| conserved hypothetical protein [... 1182 0.0 gi|15840504|ref|NP_335541.1| hypothetical protein MT1099 [Mycoba... 1082 0.0 gi|183984368|ref|YP_001852659.1| hypothetical protein MMAR_4397 ... 952 0.0 gi|240170298|ref|ZP_04748957.1| hypothetical protein MkanA1_1337... 941 0.0 gi|296169934|ref|ZP_06851543.1| conserved hypothetical protein [... 941 0.0 gi|41407114|ref|NP_959950.1| hypothetical protein MAP1016c [Myco... 915 0.0 gi|254823415|ref|ZP_05228416.1| hypothetical protein MintA_26031... 910 0.0 gi|254774077|ref|ZP_05215593.1| hypothetical protein MaviaA2_053... 897 0.0 gi|118465570|ref|YP_880440.1| hypothetical protein MAV_1193 [Myc... 895 0.0 gi|118616100|ref|YP_904432.1| hypothetical protein MUL_0211 [Myc... 890 0.0 gi|342861660|ref|ZP_08718306.1| hypothetical protein MCOL_22341 ... 887 0.0 gi|333989655|ref|YP_004522269.1| hypothetical protein JDM601_101... 820 0.0 gi|120405634|ref|YP_955463.1| hypothetical protein Mvan_4682 [My... 813 0.0 gi|145222623|ref|YP_001133301.1| hypothetical protein Mflv_2035 ... 803 0.0 gi|118467856|ref|YP_889524.1| transmembrane protein [Mycobacteri... 803 0.0 gi|119870262|ref|YP_940214.1| hypothetical protein Mkms_4232 [My... 766 0.0 gi|169628600|ref|YP_001702249.1| hypothetical protein MAB_1509 [... 763 0.0 gi|108801121|ref|YP_641318.1| hypothetical protein Mmcs_4157 [My... 762 0.0 gi|296138667|ref|YP_003645910.1| hypothetical protein Tpau_0938 ... 686 0.0 gi|343928501|ref|ZP_08767949.1| hypothetical protein GOALK_117_0... 644 0.0 gi|262202637|ref|YP_003273845.1| hypothetical protein Gbro_2734 ... 609 3e-172 gi|326384940|ref|ZP_08206614.1| hypothetical protein SCNU_18437 ... 599 6e-169 gi|111020761|ref|YP_703733.1| hypothetical protein RHA1_ro03775 ... 579 6e-163 gi|226363040|ref|YP_002780822.1| hypothetical protein ROP_36300 ... 575 6e-162 gi|340795590|ref|YP_004761053.1| hypothetical protein CVAR_2639 ... 546 5e-153 gi|296269602|ref|YP_003652234.1| membrane protein [Thermobispora... 454 2e-125 gi|54022541|ref|YP_116783.1| hypothetical protein nfa5740 [Nocar... 431 3e-118 gi|333918368|ref|YP_004491949.1| hypothetical protein AS9A_0695 ... 414 2e-113 gi|226362915|ref|YP_002780695.1| hypothetical protein ROP_35030 ... 410 3e-112 gi|226303502|ref|YP_002763460.1| hypothetical protein RER_00130 ... 409 7e-112 gi|229491163|ref|ZP_04384991.1| conserved hypothetical protein [... 407 3e-111 gi|325672535|ref|ZP_08152231.1| membrane-spanning protein [Rhodo... 405 9e-111 gi|326384552|ref|ZP_08206231.1| integral membrane protein [Gordo... 405 1e-110 gi|226364330|ref|YP_002782112.1| hypothetical protein ROP_49200 ... 405 1e-110 gi|229490794|ref|ZP_04384629.1| conserved hypothetical protein [... 404 2e-110 gi|258655064|ref|YP_003204220.1| hypothetical protein Namu_4958 ... 404 2e-110 gi|312139581|ref|YP_004006917.1| integral membrane protein [Rhod... 402 8e-110 gi|312138300|ref|YP_004005636.1| integral membrane protein [Rhod... 402 1e-109 gi|111021807|ref|YP_704779.1| hypothetical protein RHA1_ro04836 ... 401 2e-109 gi|169627809|ref|YP_001701458.1| hypothetical protein MAB_0708 [... 398 2e-108 gi|108801508|ref|YP_641705.1| hypothetical protein Mmcs_4545 [My... 391 1e-106 gi|258655333|ref|YP_003204489.1| membrane protein [Nakamurella m... 388 1e-105 gi|269793727|ref|YP_003313182.1| hypothetical protein Sked_03810... 387 4e-105 gi|339492119|ref|YP_004712412.1| hypothetical protein PSTAB_0042... 383 6e-104 gi|146280430|ref|YP_001170583.1| hypothetical protein PST_0033 [... 382 1e-103 gi|327478647|gb|AEA81957.1| conserved hypothetical protein [Pseu... 381 2e-103 >gi|15608209|ref|NP_215585.1| hypothetical protein Rv1069c [Mycobacterium tuberculosis H37Rv] gi|31792260|ref|NP_854753.1| hypothetical protein Mb1098c [Mycobacterium bovis AF2122/97] gi|148660854|ref|YP_001282377.1| hypothetical protein MRA_1079 [Mycobacterium tuberculosis H37Ra] 61 more sequence titles Length=587 Score = 1187 bits (3072), Expect = 0.0, Method: Compositional matrix adjust. Identities = 587/587 (100%), Positives = 587/587 (100%), Gaps = 0/587 (0%) Query 1 MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVW 60 MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVW Sbjct 1 MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVW 60 Query 61 FSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV 120 FSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV Sbjct 61 FSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV 120 Query 121 GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRF 180 GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRF Sbjct 121 GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRF 180 Query 181 LVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP 240 LVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP Sbjct 181 LVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP 240 Query 241 KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIM 300 KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIM Sbjct 241 KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIM 300 Query 301 ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS 360 ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS Sbjct 301 ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS 360 Query 361 WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL 420 WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL Sbjct 361 WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL 420 Query 421 ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR 480 ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR Sbjct 421 ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR 480 Query 481 PRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATH 540 PRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATH Sbjct 481 PRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATH 540 Query 541 VPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANAKPFGS 587 VPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANAKPFGS Sbjct 541 VPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANAKPFGS 587 >gi|340626080|ref|YP_004744532.1| hypothetical protein MCAN_10751 [Mycobacterium canettii CIPT 140010059] gi|340004270|emb|CCC43411.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=587 Score = 1184 bits (3064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 586/587 (99%), Positives = 586/587 (99%), Gaps = 0/587 (0%) Query 1 MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVW 60 MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVW Sbjct 1 MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVW 60 Query 61 FSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV 120 FSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV Sbjct 61 FSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV 120 Query 121 GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRF 180 GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRF Sbjct 121 GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRF 180 Query 181 LVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP 240 LVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP Sbjct 181 LVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP 240 Query 241 KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIM 300 KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIM Sbjct 241 KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIM 300 Query 301 ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS 360 ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS Sbjct 301 ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS 360 Query 361 WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL 420 WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL Sbjct 361 WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL 420 Query 421 ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR 480 ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR Sbjct 421 ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR 480 Query 481 PRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATH 540 PRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVL QTRWIPVVTFVQVSADMAVATH Sbjct 481 PRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLLQTRWIPVVTFVQVSADMAVATH 540 Query 541 VPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANAKPFGS 587 VPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANAKPFGS Sbjct 541 VPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANAKPFGS 587 >gi|121636998|ref|YP_977221.1| hypothetical protein BCG_1127c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989471|ref|YP_002644158.1| hypothetical protein JTY_1100 [Mycobacterium bovis BCG str. Tokyo 172] gi|121492645|emb|CAL71114.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772584|dbj|BAH25390.1| hypothetical protein JTY_1100 [Mycobacterium bovis BCG str. Tokyo 172] gi|341601014|emb|CCC63686.1| conserved hypothetical protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=587 Score = 1184 bits (3064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 586/587 (99%), Positives = 586/587 (99%), Gaps = 0/587 (0%) Query 1 MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVW 60 MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVW Sbjct 1 MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVW 60 Query 61 FSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV 120 FSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV Sbjct 61 FSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV 120 Query 121 GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRF 180 GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRF Sbjct 121 GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRF 180 Query 181 LVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP 240 LVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP Sbjct 181 LVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP 240 Query 241 KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIM 300 KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIM Sbjct 241 KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIM 300 Query 301 ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS 360 ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS Sbjct 301 ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS 360 Query 361 WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL 420 WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL Sbjct 361 WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL 420 Query 421 ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR 480 ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR Sbjct 421 ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR 480 Query 481 PRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATH 540 RVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATH Sbjct 481 LRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATH 540 Query 541 VPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANAKPFGS 587 VPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANAKPFGS Sbjct 541 VPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANAKPFGS 587 >gi|289442496|ref|ZP_06432240.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289569057|ref|ZP_06449284.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289749601|ref|ZP_06508979.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289753132|ref|ZP_06512510.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289415415|gb|EFD12655.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289542811|gb|EFD46459.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289690188|gb|EFD57617.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289693719|gb|EFD61148.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length=587 Score = 1183 bits (3061), Expect = 0.0, Method: Compositional matrix adjust. Identities = 586/587 (99%), Positives = 586/587 (99%), Gaps = 0/587 (0%) Query 1 MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVW 60 MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVW Sbjct 1 MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVW 60 Query 61 FSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV 120 FSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV Sbjct 61 FSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV 120 Query 121 GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRF 180 GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRF Sbjct 121 GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRF 180 Query 181 LVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP 240 LVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP Sbjct 181 LVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP 240 Query 241 KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIM 300 KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIM Sbjct 241 KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIM 300 Query 301 ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS 360 ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS Sbjct 301 ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS 360 Query 361 WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL 420 WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL Sbjct 361 WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL 420 Query 421 ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR 480 ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR Sbjct 421 ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR 480 Query 481 PRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATH 540 P VVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATH Sbjct 481 PWVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATH 540 Query 541 VPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANAKPFGS 587 VPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANAKPFGS Sbjct 541 VPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANAKPFGS 587 >gi|289446655|ref|ZP_06436399.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289419613|gb|EFD16814.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] Length=587 Score = 1182 bits (3059), Expect = 0.0, Method: Compositional matrix adjust. Identities = 585/587 (99%), Positives = 586/587 (99%), Gaps = 0/587 (0%) Query 1 MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVW 60 MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVW Sbjct 1 MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVW 60 Query 61 FSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV 120 FSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV Sbjct 61 FSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV 120 Query 121 GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRF 180 GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRF Sbjct 121 GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRF 180 Query 181 LVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP 240 LVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP Sbjct 181 LVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP 240 Query 241 KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIM 300 KTPLRSGGPGSLVSWESLGHQGRIFVHS PTIADLTAFNGTPAVEPIRTYAGLNSADGIM Sbjct 241 KTPLRSGGPGSLVSWESLGHQGRIFVHSDPTIADLTAFNGTPAVEPIRTYAGLNSADGIM 300 Query 301 ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS 360 ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS Sbjct 301 ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS 360 Query 361 WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL 420 WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL Sbjct 361 WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL 420 Query 421 ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR 480 ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR Sbjct 421 ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR 480 Query 481 PRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATH 540 PRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATH Sbjct 481 PRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATH 540 Query 541 VPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANAKPFGS 587 VPDG+GHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANAKPFGS Sbjct 541 VPDGNGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANAKPFGS 587 >gi|15840504|ref|NP_335541.1| hypothetical protein MT1099 [Mycobacterium tuberculosis CDC1551] gi|13880679|gb|AAK45355.1| hypothetical protein MT1099 [Mycobacterium tuberculosis CDC1551] Length=603 Score = 1082 bits (2798), Expect = 0.0, Method: Compositional matrix adjust. Identities = 537/544 (99%), Positives = 537/544 (99%), Gaps = 0/544 (0%) Query 1 MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVW 60 MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVW Sbjct 1 MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVW 60 Query 61 FSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV 120 FSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV Sbjct 61 FSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV 120 Query 121 GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRF 180 GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRF Sbjct 121 GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRF 180 Query 181 LVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP 240 LVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP Sbjct 181 LVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP 240 Query 241 KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIM 300 KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIAD TAFNGTPAVEPIRTYAGLNSADGIM Sbjct 241 KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADXTAFNGTPAVEPIRTYAGLNSADGIM 300 Query 301 ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS 360 ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS Sbjct 301 ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS 360 Query 361 WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL 420 WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL Sbjct 361 WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL 420 Query 421 ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR 480 ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR Sbjct 421 ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR 480 Query 481 PRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATH 540 PRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAV Sbjct 481 PRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVVRM 540 Query 541 VPDG 544 G Sbjct 541 CRTG 544 >gi|183984368|ref|YP_001852659.1| hypothetical protein MMAR_4397 [Mycobacterium marinum M] gi|183177694|gb|ACC42804.1| conserved hypothetical transmembrane protein [Mycobacterium marinum M] Length=581 Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust. Identities = 471/581 (82%), Positives = 527/581 (91%), Gaps = 0/581 (0%) Query 1 MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVW 60 M++ +AT+T+ASDE A A+++V+T+ + +T P+ R+ WW+RHYTFTG+A+GL+F+W Sbjct 1 MSDMDSATSTDASDEAAPAADESVETSGSGETAAPKTTRNAWWVRHYTFTGSAVGLIFLW 60 Query 61 FSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV 120 FSMTPSLLPRGPLFQGLVSGI GA GYGLGVFAVWLVRYMRS + SPPPPRW WPPLIAV Sbjct 61 FSMTPSLLPRGPLFQGLVSGISGAIGYGLGVFAVWLVRYMRSQDDSPPPPRWVWPPLIAV 120 Query 121 GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRF 180 G VG+V MA+ FH WQDDVRDLMGV HL+WYDYPL A +SL+VLF VE+GQFIR LF F Sbjct 121 GGVGIVLMAIWFHFWQDDVRDLMGVVHLKWYDYPLTAVVSLIVLFAFVEVGQFIRRLFSF 180 Query 181 LVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP 240 LV Q+DRIAPFR+SA IVVVLLV LTIT+LNGVVLKFAM+SMNSTFA+VN+E++P+SAPP Sbjct 181 LVRQLDRIAPFRLSATIVVVLLVTLTITVLNGVVLKFAMHSMNSTFASVNDELDPNSAPP 240 Query 241 KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIM 300 T LRSGGP SLVSWESLGHQGR+FV GP+ ADLTAFNG+PA EPIR YAGLNSA+GI+ Sbjct 241 NTALRSGGPQSLVSWESLGHQGRVFVEGGPSRADLTAFNGSPATEPIRAYAGLNSANGII 300 Query 301 ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS 360 ATAELAAREL RTGGL+RAVVAVAT+TGTGWINEAEASALEYMYNG+TAIVSMQYS+LPS Sbjct 301 ATAELAARELQRTGGLQRAVVAVATTTGTGWINEAEASALEYMYNGNTAIVSMQYSYLPS 360 Query 361 WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL 420 WLSFLVDKENAR AG+ALFEAVDKLIRQ+PE QRPKLVVFGESLGSFGGEAPFMNLNNIL Sbjct 361 WLSFLVDKENARQAGQALFEAVDKLIRQMPEFQRPKLVVFGESLGSFGGEAPFMNLNNIL 420 Query 421 ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR 480 ARTDGALFSGPTFNNTVW LTANRD GSP+WLPIYDDG NVRF+ARA DLQRPDAPWG+ Sbjct 421 ARTDGALFSGPTFNNTVWTELTANRDPGSPEWLPIYDDGYNVRFIARASDLQRPDAPWGK 480 Query 481 PRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATH 540 PRVVYLQHASDPIAWWTP LLF EPDWLRE+RGYDVLPQTRWIP+VTF+QVSADMAVA Sbjct 481 PRVVYLQHASDPIAWWTPDLLFSEPDWLREKRGYDVLPQTRWIPLVTFLQVSADMAVAVD 540 Query 541 VPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHAN 581 VPDGHGHRYV+ VA+GWAAVLSPPGWT +KTERL+PLL AN Sbjct 541 VPDGHGHRYVSNVANGWAAVLSPPGWTPEKTERLRPLLRAN 581 >gi|240170298|ref|ZP_04748957.1| hypothetical protein MkanA1_13378 [Mycobacterium kansasii ATCC 12478] Length=590 Score = 941 bits (2432), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/575 (81%), Positives = 510/575 (89%), Gaps = 5/575 (0%) Query 15 EPATGAEQAVDTAATP--QTPEPQPIRSTWWIRHYTFTGTAMGLVFVWFSMTPSLLPRGP 72 EP G +++A P +TPEPQ +R WWIRHYTFTGTA+GL+F+WFSMTPSLLPRGP Sbjct 17 EPKAGG---TESSAIPVAKTPEPQAVRKAWWIRHYTFTGTALGLIFLWFSMTPSLLPRGP 73 Query 73 LFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAVGAVGMVGMAVQF 132 L+QGLVSGI GA GYGLGVF VWLVRYMRS NSSPPPPRW W PLIAVGAVGMV MA+ F Sbjct 74 LYQGLVSGISGAIGYGLGVFTVWLVRYMRSQNSSPPPPRWVWLPLIAVGAVGMVLMAIWF 133 Query 133 HVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRFLVGQVDRIAPFR 192 HVWQDDVRDLMGVEHL+WYDYPLAAA+SL+ LFTLVEIGQFIR L FLV QVDRIAPFR Sbjct 134 HVWQDDVRDLMGVEHLKWYDYPLAAAVSLIALFTLVEIGQFIRRLVGFLVRQVDRIAPFR 193 Query 193 VSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSL 252 VSA IVVVLLV LTITLLNGVVLKFAM SMNSTFA+VN EMNP++APP+T LRSGGP SL Sbjct 194 VSATIVVVLLVALTITLLNGVVLKFAMRSMNSTFASVNEEMNPNTAPPRTSLRSGGPQSL 253 Query 253 VSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIMATAELAARELAR 312 VSW+SLGHQGRIFV +GPT+A+LT F+GTPA EPIR YAGL+SA GI TAELAAR+L R Sbjct 254 VSWDSLGHQGRIFVEAGPTVAELTKFSGTPATEPIRAYAGLDSAKGITETAELAARDLQR 313 Query 313 TGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENAR 372 GGL+RAVVAVAT+TGTGWINEAEA ALEY+YNG+TAIVSMQYS+LPSWLSFLVDKENAR Sbjct 314 AGGLQRAVVAVATTTGTGWINEAEADALEYIYNGNTAIVSMQYSYLPSWLSFLVDKENAR 373 Query 373 HAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNILARTDGALFSGPT 432 HAG+ALFEAVDKLIRQ+PE +RPKLVVFGESLGSFGGEAPFM L+N+LARTDGALFSGPT Sbjct 374 HAGQALFEAVDKLIRQMPEFKRPKLVVFGESLGSFGGEAPFMTLDNVLARTDGALFSGPT 433 Query 433 FNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGRPRVVYLQHASDP 492 FNNT+WN LT+ RD GSP+WLPIY G NVRFVAR DLQRPD PWGRPRVVYLQHASDP Sbjct 434 FNNTIWNDLTSTRDPGSPEWLPIYHHGANVRFVARPSDLQRPDEPWGRPRVVYLQHASDP 493 Query 493 IAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRYVAT 552 IAWWTP LLF++PDWLRE RGYDVLPQTRWIPVVTF+QV+ADMAVA VP GHGH YVA Sbjct 494 IAWWTPDLLFKKPDWLREPRGYDVLPQTRWIPVVTFLQVTADMAVAVEVPPGHGHHYVAD 553 Query 553 VADGWAAVLSPPGWTQQKTERLQPLLHANAKPFGS 587 D WAA+LSPPGWTQQ TERL+P+LH++AKP GS Sbjct 554 AVDAWAAILSPPGWTQQMTERLRPVLHSDAKPLGS 588 >gi|296169934|ref|ZP_06851543.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895398|gb|EFG75103.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=590 Score = 941 bits (2431), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/590 (79%), Positives = 511/590 (87%), Gaps = 4/590 (0%) Query 1 MTEPAAATTTNASDEPATGAEQAVDTAATPQT----PEPQPIRSTWWIRHYTFTGTAMGL 56 M++P +AT T+ P A++A A P+T PEP+P + WW+RHYTFTGT +GL Sbjct 1 MSDPGSATNTDTGGNPTAVADEAGRPQAGPETGPAVPEPRPGQKPWWVRHYTFTGTTVGL 60 Query 57 VFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPP 116 VFVWFSMTPSLLPRG LFQGLVSGI GA GYGLGVFAVWLVRYM + + SPP PRWAW Sbjct 61 VFVWFSMTPSLLPRGALFQGLVSGISGAIGYGLGVFAVWLVRYMGAKDHSPPAPRWAWKV 120 Query 117 LIAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRW 176 LI +GA+GMV MA+ FHVWQD+VRDLMGV HL+WYDYP+AA LSLVVLFTLVEIGQFIRW Sbjct 121 LIPIGALGMVLMAIWFHVWQDNVRDLMGVAHLKWYDYPVAAGLSLVVLFTLVEIGQFIRW 180 Query 177 LFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPD 236 L RFLVGQVDRIAPFR+SA IVV LLVVLTIT+LNGVVLKFAM +MN TFA+ NNEMNPD Sbjct 181 LVRFLVGQVDRIAPFRLSATIVVALLVVLTITVLNGVVLKFAMRTMNDTFASANNEMNPD 240 Query 237 SAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSA 296 +APP+TPLRSGGP SLVSWESLGHQGRIFV +GP + LT FNG A EPIR YAGLNSA Sbjct 241 TAPPRTPLRSGGPESLVSWESLGHQGRIFVEAGPRVDQLTTFNGVQATEPIRAYAGLNSA 300 Query 297 DGIMATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYS 356 DGI ATAELAAREL RTGGL+RAVVAVAT+TGTGWINEAEA ALEYMYNG+TAIVSMQYS Sbjct 301 DGITATAELAARELQRTGGLQRAVVAVATTTGTGWINEAEADALEYMYNGNTAIVSMQYS 360 Query 357 FLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNL 416 FLPSWLSFLVDKENARHAG+ALFEAVD+LIRQ+PE+QRPKLVVFGESLGSFGGEAPFM+L Sbjct 361 FLPSWLSFLVDKENARHAGQALFEAVDRLIRQMPEAQRPKLVVFGESLGSFGGEAPFMSL 420 Query 417 NNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDA 476 NN+LARTDGALFSGPTF NT+W LTA RDAGSP+WLPIY+DG+N RFVAR +L RP+A Sbjct 421 NNVLARTDGALFSGPTFQNTIWTELTATRDAGSPEWLPIYNDGKNARFVARPPNLARPNA 480 Query 477 PWGRPRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMA 536 W RPRVVYLQHASDPIAWW+P LLF EPDWLRE+RGYDVLP+TRWIPVVTF+QVSADMA Sbjct 481 AWDRPRVVYLQHASDPIAWWSPDLLFSEPDWLRERRGYDVLPETRWIPVVTFLQVSADMA 540 Query 537 VATHVPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANAKPFG 586 VA VP+GHGH YVA ADGWAAVLSPPGWT +KT RL+ LLH+ A G Sbjct 541 VAVDVPEGHGHHYVADAADGWAAVLSPPGWTPEKTARLRLLLHSEATSTG 590 >gi|41407114|ref|NP_959950.1| hypothetical protein MAP1016c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395465|gb|AAS03333.1| hypothetical protein MAP_1016c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336461462|gb|EGO40332.1| putative membrane protein [Mycobacterium avium subsp. paratuberculosis S397] Length=594 Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust. Identities = 459/593 (78%), Positives = 507/593 (86%), Gaps = 12/593 (2%) Query 1 MTEPAAATTTNASDEPA----------TGAEQAVDTAATPQTPEP--QPIRSTWWIRHYT 48 M+EP +AT T+ DEPA TGA+ AV P+ P P Q WW+RHYT Sbjct 1 MSEPGSATDTDTGDEPAQQQTAPDGTRTGAQTAVAEHPAPKAPAPGTQQPEKPWWVRHYT 60 Query 49 FTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPP 108 FTGT +GLVF+WFS+TPSLLPRG +FQGLVSGI GA GYGLGVFAVWL RY+ + SSPP Sbjct 61 FTGTTVGLVFIWFSLTPSLLPRGAIFQGLVSGISGAIGYGLGVFAVWLYRYLWAKPSSPP 120 Query 109 PPRWAWPPLIAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLV 168 PPRWAW LI VGAVGMV MA+ FHVWQD VRDLMGV HL+WYDYP+A LSLVVLFT V Sbjct 121 PPRWAWKILIPVGAVGMVLMAIWFHVWQDKVRDLMGVAHLKWYDYPVAGVLSLVVLFTCV 180 Query 169 EIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAA 228 EIGQF RWL FLVG++DRIAPFR+SA IVV LLVVLTITLLNGVVLKFAM +MN+TFA+ Sbjct 181 EIGQFTRWLVSFLVGRLDRIAPFRLSATIVVALLVVLTITLLNGVVLKFAMRTMNNTFAS 240 Query 229 VNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIR 288 NNEM+PD+APPKTPLRSGGP SLVSWESLGHQGR+F+ GP + LTAFNG PA EPIR Sbjct 241 ANNEMSPDTAPPKTPLRSGGPESLVSWESLGHQGRVFIEGGPRVEQLTAFNGAPATEPIR 300 Query 289 TYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDT 348 YAGLNSADGI ATAELA REL RTGGLRRAVVAVAT+TGTGWINEAEA+ALEYMYNG+T Sbjct 301 AYAGLNSADGITATAELATRELQRTGGLRRAVVAVATTTGTGWINEAEATALEYMYNGNT 360 Query 349 AIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFG 408 AIVSMQYSFLPSWLSFLVDKENARHAG+ALFEAVD+L+RQLPE+QRPKLVVFGESLGSFG Sbjct 361 AIVSMQYSFLPSWLSFLVDKENARHAGQALFEAVDRLVRQLPEAQRPKLVVFGESLGSFG 420 Query 409 GEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARA 468 GEAPFM+LNN+LARTDGALFSGPTFNNT+W LT+ RDAGSP+WLPIY+DGRNVRFVARA Sbjct 421 GEAPFMSLNNVLARTDGALFSGPTFNNTIWTDLTSTRDAGSPEWLPIYNDGRNVRFVARA 480 Query 469 RDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTF 528 +L RP PW PRVVYLQHASDPIAWWT LLF PDWL+E+RGYDVLP+T WIPVVTF Sbjct 481 ANLARPKDPWDHPRVVYLQHASDPIAWWTTDLLFARPDWLKERRGYDVLPETTWIPVVTF 540 Query 529 VQVSADMAVATHVPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHAN 581 +QVSADMAVA +VPDGHGH YVA VAD WA+VLSPPGWT KT+RL+PLLHAN Sbjct 541 LQVSADMAVAQNVPDGHGHHYVADVADAWASVLSPPGWTPDKTDRLRPLLHAN 593 >gi|254823415|ref|ZP_05228416.1| hypothetical protein MintA_26031 [Mycobacterium intracellulare ATCC 13950] Length=590 Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust. Identities = 454/591 (77%), Positives = 501/591 (85%), Gaps = 10/591 (1%) Query 1 MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRST---------WWIRHYTFTG 51 M+EP +AT + D+PA E++ A + P P+ R+ WW+RHYTFTG Sbjct 1 MSEPGSATNVDTGDKPADDVEESA-VAVSQAPPAPRAGRAAPTLPWTEKPWWVRHYTFTG 59 Query 52 TAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPR 111 T +GLVF+W S+TPSLLPRGPLFQGLVSG+ GA GYGLGVF+VWLVR+MR + SPPPPR Sbjct 60 TTVGLVFIWLSLTPSLLPRGPLFQGLVSGLSGAIGYGLGVFSVWLVRFMREKDHSPPPPR 119 Query 112 WAWPPLIAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIG 171 WAW LI +G VG V MA+ FHVWQDDVRDLMGV HL WYDYPL+ LSLVVLFT+VEIG Sbjct 120 WAWKVLIPIGVVGQVLMAIWFHVWQDDVRDLMGVPHLEWYDYPLSGVLSLVVLFTVVEIG 179 Query 172 QFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNN 231 QF RWL RFLVGQVDR PFR+SA IVVV L VLT+T+LNGVVLKFAM +MN TFA+ NN Sbjct 180 QFTRWLVRFLVGQVDRFVPFRLSATIVVVTLAVLTVTVLNGVVLKFAMRTMNDTFASANN 239 Query 232 EMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYA 291 EMNPDSAPPKT LRSGGP SLVSWESLGHQGR+FV GP + DLTAFNG PA EPIR YA Sbjct 240 EMNPDSAPPKTALRSGGPESLVSWESLGHQGRVFVEGGPKVGDLTAFNGAPATEPIRAYA 299 Query 292 GLNSADGIMATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIV 351 GLNSADGI ATAELAAREL RTGGLRRAVVAVAT+TGTGWINEAEA+ALEYMYNG+TAIV Sbjct 300 GLNSADGITATAELAARELQRTGGLRRAVVAVATTTGTGWINEAEATALEYMYNGNTAIV 359 Query 352 SMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEA 411 SMQYSFLPSWLSFLVDKENARHAG+ALFEAVD+LIRQ+PE+QRPKLVVFGESLGSFGGEA Sbjct 360 SMQYSFLPSWLSFLVDKENARHAGQALFEAVDRLIRQMPEAQRPKLVVFGESLGSFGGEA 419 Query 412 PFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDL 471 FM+LNN+LARTDGALFSGPTF NT+W LT RD GSP+WLPIYDDGR VRFVARA +L Sbjct 420 SFMSLNNVLARTDGALFSGPTFQNTIWTDLTTTRDPGSPEWLPIYDDGRYVRFVARAGNL 479 Query 472 QRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQV 531 RP PW PRVVYLQHASDPIAWWTP L+F +PDWLRE+RGYDVLPQTRWIPVVTF+QV Sbjct 480 ARPKDPWDHPRVVYLQHASDPIAWWTPDLVFSKPDWLRERRGYDVLPQTRWIPVVTFLQV 539 Query 532 SADMAVATHVPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANA 582 SADMAVA VPDGHGHRYVA VADGWAAV+SPPGWT +KT RL+PLLHA Sbjct 540 SADMAVAVDVPDGHGHRYVADVADGWAAVMSPPGWTPEKTARLRPLLHAEG 590 >gi|254774077|ref|ZP_05215593.1| hypothetical protein MaviaA2_05310 [Mycobacterium avium subsp. avium ATCC 25291] Length=594 Score = 897 bits (2318), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/594 (78%), Positives = 508/594 (86%), Gaps = 12/594 (2%) Query 1 MTEPAAATTTNASDEPA----------TGAEQAVDTAATPQTPEP--QPIRSTWWIRHYT 48 M+EP +AT T+ DEPA TGA+ AV P+ P P Q WW+RHYT Sbjct 1 MSEPGSATDTDTGDEPAQQQTAPDGTRTGAQTAVAEHPEPKAPAPGTQQPEKPWWVRHYT 60 Query 49 FTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPP 108 FTGT +GLVF+WFS+TPSLLPRG +FQGLVSGI GA GYGLGVFAVWL RY+ + SSPP Sbjct 61 FTGTTVGLVFIWFSLTPSLLPRGAIFQGLVSGISGAIGYGLGVFAVWLYRYLWAKPSSPP 120 Query 109 PPRWAWPPLIAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLV 168 PPRWAW LI VGAVGMV MA+ FHVWQD VRDLMGV HL+WYDYP+A LSLVVLFT V Sbjct 121 PPRWAWKILIPVGAVGMVLMAIWFHVWQDKVRDLMGVAHLKWYDYPVAGVLSLVVLFTCV 180 Query 169 EIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAA 228 EIGQF RWL FLVG++DRIAPFR+SA IVV LLVVLTITLLNGVVLKFAM +MN+TFA+ Sbjct 181 EIGQFTRWLVSFLVGRLDRIAPFRLSATIVVALLVVLTITLLNGVVLKFAMRTMNNTFAS 240 Query 229 VNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIR 288 NNEM+PD+APPKTPLRSGGP SLVSWESLGHQGR+F+ GP + LTAFNG PA EPIR Sbjct 241 ANNEMSPDTAPPKTPLRSGGPESLVSWESLGHQGRVFIEGGPRVEQLTAFNGAPATEPIR 300 Query 289 TYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDT 348 YAGLNSADGI ATAELAAREL RTGGLRRAVVAVAT+TGTGWINEAEA+ALEYMYNG+T Sbjct 301 AYAGLNSADGITATAELAARELQRTGGLRRAVVAVATTTGTGWINEAEATALEYMYNGNT 360 Query 349 AIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFG 408 AIVSMQYSFLPSWLSFLVDKENARHAG+ALFEAVD+L+RQLPE+QRPKLVVFGESLGSFG Sbjct 361 AIVSMQYSFLPSWLSFLVDKENARHAGQALFEAVDRLVRQLPEAQRPKLVVFGESLGSFG 420 Query 409 GEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARA 468 GEAPFM+LNN+LARTDGALFSGPTFNNT+W LT+ RDAGSP+WLPIY+DGRNVRFVARA Sbjct 421 GEAPFMSLNNVLARTDGALFSGPTFNNTIWTDLTSTRDAGSPEWLPIYNDGRNVRFVARA 480 Query 469 RDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTF 528 +L RP PW PRVVYLQHASDPIAWWT LLF PDWL+E+RGYDVLP+T WIPVVTF Sbjct 481 ANLARPKDPWDHPRVVYLQHASDPIAWWTTDLLFARPDWLKERRGYDVLPETTWIPVVTF 540 Query 529 VQVSADMAVATHVPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANA 582 +QVSADMAVA +VPDGHGH YVA VAD WAAVLSPPGWT KT+RL+PLLHAN Sbjct 541 LQVSADMAVAQNVPDGHGHHYVADVADAWAAVLSPPGWTPDKTDRLRPLLHANG 594 >gi|118465570|ref|YP_880440.1| hypothetical protein MAV_1193 [Mycobacterium avium 104] gi|118166857|gb|ABK67754.1| conserved hypothetical protein [Mycobacterium avium 104] Length=594 Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/595 (78%), Positives = 510/595 (86%), Gaps = 14/595 (2%) Query 1 MTEPAAATTTNASDEPA----------TGAEQAVDTAATPQTP---EPQPIRSTWWIRHY 47 M+EP +AT T+ DEP+ TGA+ AV P+ P PQP + WW+RHY Sbjct 1 MSEPGSATDTDTGDEPSQQQTAPDGTRTGAQTAVAEHPAPKAPAPGTPQPEKP-WWVRHY 59 Query 48 TFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSP 107 TFTGT +GLVF+WFS+TPSLLPRG +FQGLVSGI GA GYGLGVFAVWL RY+ + SSP Sbjct 60 TFTGTTVGLVFIWFSLTPSLLPRGAIFQGLVSGISGAIGYGLGVFAVWLYRYLWAKPSSP 119 Query 108 PPPRWAWPPLIAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTL 167 PPPRWAW LI VGAVGMV MA+ FHVWQD VRDLMGV HL+WYDYP+A LSLVVLFT Sbjct 120 PPPRWAWKILIPVGAVGMVLMAIWFHVWQDKVRDLMGVAHLKWYDYPVAGVLSLVVLFTC 179 Query 168 VEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFA 227 VEIGQF RWL FLVG++DRIAPFR+SA IVV LLVVLTITLLNGVVLKFAM +MN+TFA Sbjct 180 VEIGQFTRWLVSFLVGRLDRIAPFRLSATIVVALLVVLTITLLNGVVLKFAMRTMNNTFA 239 Query 228 AVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPI 287 + NNEM+PD+APPKTPLRSGGP SLVSWESLGHQGR+F+ GP + LTAFNG PA EPI Sbjct 240 SANNEMSPDTAPPKTPLRSGGPESLVSWESLGHQGRVFIEGGPRVEQLTAFNGAPATEPI 299 Query 288 RTYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGD 347 R YAGLNSADGI ATAELAAREL RTGGLRRAVVAVAT+TGTGWINEAEA+ALEYMYNG+ Sbjct 300 RAYAGLNSADGITATAELAARELQRTGGLRRAVVAVATTTGTGWINEAEATALEYMYNGN 359 Query 348 TAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSF 407 TAIVSMQYSFLPSWLSFLVDKENARHAG+ALFEAVD+L+RQLPE+QRPKLVVFGESLGSF Sbjct 360 TAIVSMQYSFLPSWLSFLVDKENARHAGQALFEAVDRLVRQLPEAQRPKLVVFGESLGSF 419 Query 408 GGEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVAR 467 GGEAPFM+LNN+LARTDGALFSGPTFNNT+W LT+ RDAGSP+WLPIY+DGRNVRFVAR Sbjct 420 GGEAPFMSLNNVLARTDGALFSGPTFNNTIWTDLTSTRDAGSPEWLPIYNDGRNVRFVAR 479 Query 468 ARDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVT 527 A +L RP PW PRVVYLQHASDPIAWWT LLF PDWL+E+RGYDVLP+T WIPVVT Sbjct 480 AANLARPKDPWDHPRVVYLQHASDPIAWWTTDLLFARPDWLKERRGYDVLPETTWIPVVT 539 Query 528 FVQVSADMAVATHVPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANA 582 F+QVSADMAVA +VPDGHGH YVA VAD WAAVLSPPGWT KT+RL+PLLHAN Sbjct 540 FLQVSADMAVAQNVPDGHGHHYVADVADAWAAVLSPPGWTPDKTDRLRPLLHANG 594 >gi|118616100|ref|YP_904432.1| hypothetical protein MUL_0211 [Mycobacterium ulcerans Agy99] gi|118568210|gb|ABL02961.1| conserved hypothetical transmembrane protein [Mycobacterium ulcerans Agy99] Length=598 Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust. Identities = 443/552 (81%), Positives = 495/552 (90%), Gaps = 0/552 (0%) Query 1 MTEPAAATTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVW 60 M++ +AT+T+ASDE A A+++V+T+ + +T P+ R+ WW+RHYTFTG+A+GL+F+W Sbjct 1 MSDMDSATSTDASDEAAPAADESVETSGSGETAAPKTTRNAWWVRHYTFTGSAVGLIFLW 60 Query 61 FSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV 120 FSMTPSLLPRGPLFQGLVSGI GA GYGLGVFAVWLVRYMRS + SPPPPRW WPPLIAV Sbjct 61 FSMTPSLLPRGPLFQGLVSGISGAIGYGLGVFAVWLVRYMRSQDDSPPPPRWVWPPLIAV 120 Query 121 GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRF 180 G VG+V MA+ FH WQDDVRDLMGV HL+WYDYPL A +SL+VLF VE+GQFIR LF F Sbjct 121 GGVGIVLMAIWFHFWQDDVRDLMGVVHLKWYDYPLTAVVSLIVLFAFVEVGQFIRRLFSF 180 Query 181 LVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP 240 LV Q+DRIAPFR+SA IVVVLLV LTIT+LNGVVLKFAM+SMNSTFA+VN+E++P+SAPP Sbjct 181 LVRQLDRIAPFRLSATIVVVLLVTLTITVLNGVVLKFAMHSMNSTFASVNDELDPNSAPP 240 Query 241 KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIM 300 T LRSGGP SLVSWESLGHQGR+FV GP+ ADLTAFNG+PA EPIR YAGLNSA+GI+ Sbjct 241 NTALRSGGPQSLVSWESLGHQGRVFVEGGPSRADLTAFNGSPATEPIRAYAGLNSANGII 300 Query 301 ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS 360 ATAELAAREL RTGGL+RAVVAVAT+TGTGWINEAEASALEYMYNG+TAIVSMQYS+LPS Sbjct 301 ATAELAARELQRTGGLQRAVVAVATTTGTGWINEAEASALEYMYNGNTAIVSMQYSYLPS 360 Query 361 WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL 420 WLSFLVDKENAR AG+ALFEAVDKLIRQ+PE QRPKLVVFGESLGSFGGEAPFMNLNNIL Sbjct 361 WLSFLVDKENARQAGQALFEAVDKLIRQMPEFQRPKLVVFGESLGSFGGEAPFMNLNNIL 420 Query 421 ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR 480 ARTDGALFSGPTFNNTVW LTANRD GSP+WLPIYDDG NVRF+ARA DLQRPDAPWG+ Sbjct 421 ARTDGALFSGPTFNNTVWTELTANRDPGSPEWLPIYDDGYNVRFIARASDLQRPDAPWGK 480 Query 481 PRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATH 540 PRVVYLQHASDPIAWWTP LLF EPDWLRE+RGYDVLPQTRWIP+VTF+QVSADMAVA Sbjct 481 PRVVYLQHASDPIAWWTPDLLFSEPDWLREKRGYDVLPQTRWIPLVTFLQVSADMAVAVD 540 Query 541 VPDGHGHRYVAT 552 VPDG AT Sbjct 541 VPDGMDTATSAT 552 >gi|342861660|ref|ZP_08718306.1| hypothetical protein MCOL_22341 [Mycobacterium colombiense CECT 3035] gi|342130794|gb|EGT84090.1| hypothetical protein MCOL_22341 [Mycobacterium colombiense CECT 3035] Length=596 Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust. Identities = 440/593 (75%), Positives = 501/593 (85%), Gaps = 12/593 (2%) Query 1 MTEPAAATTTNASDEPATGAEQAVDTA--ATPQT-PEPQPIRST---------WWIRHYT 48 M+EP +AT T A +PA AE++ T A PQ+ P + R+ W++RHYT Sbjct 1 MSEPVSATHTEAGKDPADVAEKSAATGPDAAPQSAPASRAGRAVPTLPWTEKPWYVRHYT 60 Query 49 FTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPP 108 FTGTA+G++F+W S+TPSLLPRGPLFQGLVSG+ GA GYGLGVF+VWLVR+MR + SPP Sbjct 61 FTGTAVGVIFIWLSLTPSLLPRGPLFQGLVSGLSGAIGYGLGVFSVWLVRFMREKDHSPP 120 Query 109 PPRWAWPPLIAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLV 168 PP WAW LI +G G V MA+ FH+WQDDVRDLMGVEHL+W+DYPLA ALS+VVLF +V Sbjct 121 PPSWAWKVLIPIGLTGQVLMAIWFHIWQDDVRDLMGVEHLKWHDYPLAGALSVVVLFAVV 180 Query 169 EIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAA 228 E+GQ RWL RFLVGQVDR PFR+SA IVVV LV+LTIT+LNGVVLKFAM +MN+TFA+ Sbjct 181 ELGQATRWLVRFLVGQVDRFVPFRLSATIVVVTLVILTITVLNGVVLKFAMRTMNNTFAS 240 Query 229 VNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIR 288 N EMNPD+APPKTPLRSGGP SLVSW+SLG +GR+FV GP + DLTAFNG PA EPIR Sbjct 241 ANEEMNPDTAPPKTPLRSGGPESLVSWDSLGREGRVFVEGGPKVTDLTAFNGAPATEPIR 300 Query 289 TYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDT 348 YAGL+S+ GI A AELAAREL R GGL+RAVVAV T+TGTGWINEAEASALEYMYNG+T Sbjct 301 AYAGLDSSKGITAAAELAARELQRAGGLQRAVVAVGTTTGTGWINEAEASALEYMYNGNT 360 Query 349 AIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFG 408 AIVSMQYSFLPSWLSFLVDKENARHAG+ALFEAVDKLIRQ+PE+ RPKLVVFGESLGSFG Sbjct 361 AIVSMQYSFLPSWLSFLVDKENARHAGQALFEAVDKLIRQMPEASRPKLVVFGESLGSFG 420 Query 409 GEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARA 468 GEAPF++LNN+LARTDGALFSGPTF NT+W LT+ RD GSP+WLPIY DGR VRFVARA Sbjct 421 GEAPFLSLNNVLARTDGALFSGPTFKNTIWTDLTSTRDNGSPEWLPIYQDGRYVRFVARA 480 Query 469 RDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTF 528 +DL RP+APW PRVVYLQHASDPIAWWTP LLF +PDWL E RGYDVLPQTRWIPVVTF Sbjct 481 KDLTRPNAPWDHPRVVYLQHASDPIAWWTPDLLFSKPDWLNEPRGYDVLPQTRWIPVVTF 540 Query 529 VQVSADMAVATHVPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHAN 581 +QVSADMAVA VPDGHGH YVA VADGWAAVL+PPGWT KT +L+PLLH++ Sbjct 541 LQVSADMAVAVDVPDGHGHHYVADVADGWAAVLAPPGWTPDKTAKLRPLLHSD 593 >gi|333989655|ref|YP_004522269.1| hypothetical protein JDM601_1015 [Mycobacterium sp. JDM601] gi|333485623|gb|AEF35015.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=563 Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/558 (72%), Positives = 457/558 (82%), Gaps = 1/558 (0%) Query 25 DTAATPQTP-EPQPIRSTWWIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICG 83 DTA T P P+ WW+R YTFTGTA G+VFVW S+TPSLLPRGPLFQGLVSG G Sbjct 3 DTAVTVAEPVSPERPAKPWWVRRYTFTGTAFGVVFVWLSLTPSLLPRGPLFQGLVSGASG 62 Query 84 AFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAVGAVGMVGMAVQFHVWQDDVRDLM 143 A GYGLGVFAVWLVR+MRS +SSP PRWAW L+ V G++GM FHVWQD VRDLM Sbjct 63 AVGYGLGVFAVWLVRFMRSRDSSPSAPRWAWAVLVPVAFAGIIGMNFWFHVWQDRVRDLM 122 Query 144 GVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLV 203 GV HL W YP AA LS++VLF LVE+GQ R L RFLV Q++R+AP R+SA V +L+ Sbjct 123 GVPHLGWLAYPWAALLSVMVLFALVELGQLTRRLIRFLVRQLNRVAPPRISAVTAVTMLM 182 Query 204 VLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGR 263 VL I LLNGVV+K AM ++N TFAAVN+EM PD+A P++P RSGGPGSL SWESLG +GR Sbjct 183 VLVIALLNGVVVKVAMRTLNHTFAAVNDEMGPDTAAPESPYRSGGPGSLASWESLGREGR 242 Query 264 IFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAVVAV 323 +FV GPT+ DLTAFN PA EPIR YAGLNSADGI ATA+LAAREL R GGL RAVVAV Sbjct 243 VFVDDGPTVDDLTAFNEKPAKEPIRVYAGLNSADGIAATADLAARELQRAGGLDRAVVAV 302 Query 324 ATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVD 383 TSTGTGW+ + ++LEYMYNG+TA+VSMQYSFLPSWLSFLVDKENAR AG LFEAVD Sbjct 303 GTSTGTGWVTSPDPTSLEYMYNGNTAVVSMQYSFLPSWLSFLVDKENARQAGTMLFEAVD 362 Query 384 KLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTA 443 +L+R+LPE++RPKLVVFGESLGSFGGEAPFMNLNN+LARTDGALFSGPTF NT+W LTA Sbjct 363 RLVRELPEARRPKLVVFGESLGSFGGEAPFMNLNNVLARTDGALFSGPTFQNTIWTDLTA 422 Query 444 NRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFR 503 RD GSP+WLPIY DGR+VRFVAR DLQRPDAPW +PRV YLQHASDPIAWW PRLLF+ Sbjct 423 GRDPGSPEWLPIYRDGRHVRFVARPDDLQRPDAPWEKPRVTYLQHASDPIAWWNPRLLFK 482 Query 504 EPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRYVATVADGWAAVLSP 563 +P WL E RGYDVLP+ RW+PVVTF+QVSAD+AVA +VP GHGH Y VADGWAAVL P Sbjct 483 KPAWLSEPRGYDVLPEVRWLPVVTFLQVSADLAVAINVPSGHGHHYTQDVADGWAAVLQP 542 Query 564 PGWTQQKTERLQPLLHAN 581 PGWT +KT+RL+ LH++ Sbjct 543 PGWTPEKTDRLRQRLHSD 560 >gi|120405634|ref|YP_955463.1| hypothetical protein Mvan_4682 [Mycobacterium vanbaalenii PYR-1] gi|119958452|gb|ABM15457.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=570 Score = 813 bits (2101), Expect = 0.0, Method: Compositional matrix adjust. Identities = 412/572 (73%), Positives = 468/572 (82%), Gaps = 6/572 (1%) Query 10 TNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVWFSMTPSLLP 69 T+ + PA EQ T A +T P R WW+RHYTFTGTA+G VF+W S+TPSLLP Sbjct 2 TDTGEAPAALIEQ---TPAGTKTTAP---RRAWWVRHYTFTGTAVGFVFLWLSLTPSLLP 55 Query 70 RGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAVGAVGMVGMA 129 RGPLFQGLVSG GA GY LGVFAVWLVR+MRS ++SPP PR AWP L +G +GMV M Sbjct 56 RGPLFQGLVSGGAGAIGYSLGVFAVWLVRFMRSKDTSPPAPRRAWPVLGVIGVIGMVIMV 115 Query 130 VQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRFLVGQVDRIA 189 +QFH WQDDVRDLMGV L ++DYPLAAA+S+V LF LVEIGQ + RFL QV R+A Sbjct 116 IQFHNWQDDVRDLMGVPRLTFWDYPLAAAISVVTLFVLVEIGQLVGRFVRFLDRQVKRVA 175 Query 190 PFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPPKTPLRSGGP 249 P RVSA +VV LL+ LTI LLNGVV++FAM+++N TFAAVN+E +PD A P + LRSGGP Sbjct 176 PPRVSAVVVVTLLLALTIALLNGVVVRFAMSTINKTFAAVNDETDPDFAAPDSDLRSGGP 235 Query 250 GSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIMATAELAARE 309 SLVSWESLGHQGR+F+ GP++ DLT FNG PA EPIR YAGLNSADGI TA LAA+E Sbjct 236 QSLVSWESLGHQGRVFISGGPSVEDLTEFNGDPATEPIRAYAGLNSADGIKETAALAAQE 295 Query 310 LARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKE 369 L RTGGL RAVVAVAT+TGTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKE Sbjct 296 LQRTGGLERAVVAVATTTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKE 355 Query 370 NARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNILARTDGALFS 429 NAR AG+ALFEAVD LIR++PE+QRPKLVVFGESLGSFGGEAPF+ LNN++ARTDGALFS Sbjct 356 NARQAGQALFEAVDALIREMPEAQRPKLVVFGESLGSFGGEAPFLALNNLIARTDGALFS 415 Query 430 GPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGRPRVVYLQHA 489 GPTFNNT+W LT NRDAGSP+WLP++D G NVRFVA RDLQRP PW +PRVVYLQHA Sbjct 416 GPTFNNTIWTDLTRNRDAGSPEWLPVFDKGENVRFVAEPRDLQRPHDPWEQPRVVYLQHA 475 Query 490 SDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRY 549 SDPIAWW P LLF PDWL E RGYDV P WIPVVTF+QVSADMAVA +VPDGHGH Y Sbjct 476 SDPIAWWNPDLLFARPDWLHEPRGYDVSPGMEWIPVVTFLQVSADMAVAVNVPDGHGHVY 535 Query 550 VATVADGWAAVLSPPGWTQQKTERLQPLLHAN 581 V VAD WA+++ PPGWTQ KTE+L+ LL ++ Sbjct 536 VRNVADAWASIMLPPGWTQDKTEKLRGLLRSD 567 >gi|145222623|ref|YP_001133301.1| hypothetical protein Mflv_2035 [Mycobacterium gilvum PYR-GCK] gi|315443088|ref|YP_004075967.1| hypothetical protein Mspyr1_14590 [Mycobacterium sp. Spyr1] gi|145215109|gb|ABP44513.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315261391|gb|ADT98132.1| predicted membrane protein [Mycobacterium sp. Spyr1] Length=569 Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/564 (72%), Positives = 465/564 (83%), Gaps = 0/564 (0%) Query 18 TGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGL 77 TG A TP P R WWIR YTFTGTA+GLVF++ S+TPSLLPRGPLFQGL Sbjct 3 TGEAPAEALEETPAPVPEAPSRRGWWIRRYTFTGTAVGLVFLFLSLTPSLLPRGPLFQGL 62 Query 78 VSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAVGAVGMVGMAVQFHVWQD 137 VSG GA GY LGVF VWLVR+MRS ++SPP PRWAWP L+ VG +G++ M +FH WQD Sbjct 63 VSGGAGAIGYALGVFGVWLVRFMRSKDTSPPAPRWAWPTLVTVGLIGLIVMVFRFHSWQD 122 Query 138 DVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAI 197 DVRDLMGV L ++DYPLAAA+S+V LF VEIGQ + L RFLV QVDR+AP R++A + Sbjct 123 DVRDLMGVPRLTFWDYPLAAAISVVTLFLFVEIGQLVGRLVRFLVRQVDRVAPPRIAAVV 182 Query 198 VVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWES 257 VV LL+ LTI LLNGVV++FAM+++NSTFA+VN+E +PD+ P++ LRSGGP SLVSWES Sbjct 183 VVALLLALTIALLNGVVVRFAMSTINSTFASVNDETDPDNPAPQSVLRSGGPESLVSWES 242 Query 258 LGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIMATAELAARELARTGGLR 317 LGHQGR+FV +GPT+ +LT+FNG+PA EPIR YAGLNSADGI TA LAA+EL RTGGL+ Sbjct 243 LGHQGRVFVANGPTVDELTSFNGSPATEPIRAYAGLNSADGIKETAALAAQELQRTGGLQ 302 Query 318 RAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEA 377 RAVVAVAT+TGTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENAR AG+A Sbjct 303 RAVVAVATTTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARQAGQA 362 Query 378 LFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTV 437 LFEA+D L+R++PE+QRPKLVVFGESLGSFGGEAPF+ LNN++ARTDGALFSGPTFNNT+ Sbjct 363 LFEAIDALVREMPEAQRPKLVVFGESLGSFGGEAPFLALNNLIARTDGALFSGPTFNNTI 422 Query 438 WNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGRPRVVYLQHASDPIAWWT 497 W LT NRD GSP+WLPIYD G NVRFVA D RP PW +PRVVYLQHASDPIAWW Sbjct 423 WEDLTRNRDPGSPEWLPIYDRGENVRFVADPADFARPQDPWEQPRVVYLQHASDPIAWWN 482 Query 498 PRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRYVATVADGW 557 LLF +PDWLRE RG DV P WIPVVTF+QVSADMAVA VPDGHGH YV VA+ W Sbjct 483 TDLLFTKPDWLREARGSDVSPNMEWIPVVTFLQVSADMAVAVDVPDGHGHVYVRNVANAW 542 Query 558 AAVLSPPGWTQQKTERLQPLLHAN 581 AA+L PPGWT +KTE+L+ +L ++ Sbjct 543 AAILEPPGWTPEKTEKLRTMLRSD 566 >gi|118467856|ref|YP_889524.1| transmembrane protein [Mycobacterium smegmatis str. MC2 155] gi|118169143|gb|ABK70039.1| conserved membrane-spanning protein [Mycobacterium smegmatis str. MC2 155] Length=576 Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/574 (72%), Positives = 463/574 (81%), Gaps = 4/574 (0%) Query 8 TTTNASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVWFSMTPSL 67 T T + + G A A + P+ + WW+RHYTF GTA GLVF+W S+TPSL Sbjct 4 TKTTEDVDRSGGEPHAARAAGHHEAPD----KPAWWVRHYTFFGTATGLVFIWLSLTPSL 59 Query 68 LPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAVGAVGMVG 127 LPRGPLFQGLVSG GA GYGLGVF VWLVRYM S +SSP PRWAW L+ VG VG + Sbjct 60 LPRGPLFQGLVSGGAGAIGYGLGVFGVWLVRYMCSADSSPKAPRWAWVALVVVGIVGQIL 119 Query 128 MAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRFLVGQVDR 187 M V FHVWQD++RD MGV L+++D+PL A LS+VVL+ LVEIGQ I L RFLV Q+DR Sbjct 120 MIVYFHVWQDEIRDFMGVPRLKFWDHPLTAVLSIVVLYVLVEIGQLIGKLVRFLVRQLDR 179 Query 188 IAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPPKTPLRSG 247 +AP RVSA +VV LL+ L+I LLNGVV +FAM+++N TFAAVN+E +PD + P +PLRSG Sbjct 180 VAPPRVSAVVVVALLLALSIALLNGVVARFAMSTINKTFAAVNDEDSPDFSAPTSPLRSG 239 Query 248 GPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIMATAELAA 307 GPGSL SWESLGHQGR+FV S PT+ L+ FNG PAVEPIR YAGL+SADGI ATA LAA Sbjct 240 GPGSLASWESLGHQGRVFVASAPTVQQLSEFNGAPAVEPIRAYAGLHSADGIKATAALAA 299 Query 308 RELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVD 367 REL RTGGL RAVVAVAT+TGTGWIN AEA+ALEYMYNGDTAIVSMQYS+LPSWLSFLVD Sbjct 300 RELERTGGLDRAVVAVATTTGTGWINNAEATALEYMYNGDTAIVSMQYSYLPSWLSFLVD 359 Query 368 KENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNILARTDGAL 427 KENAR AG+ALFEAVD+LIR+ PE+ RPKLVVFGESLGSFGGEAPF+ LNN++ARTDGAL Sbjct 360 KENARQAGQALFEAVDELIRERPEADRPKLVVFGESLGSFGGEAPFLALNNLIARTDGAL 419 Query 428 FSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGRPRVVYLQ 487 FSGPTFNNT+W LT NRD GSP+WLPIYD G NVRFVA A DL RP+ PW PRVVYLQ Sbjct 420 FSGPTFNNTIWADLTRNRDPGSPEWLPIYDKGENVRFVAEAGDLGRPEDPWSTPRVVYLQ 479 Query 488 HASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGH 547 HASDPIAWW LLF +PDWLRE RGYDV P T WIPVVTF+QVSADMAVA VPDGHGH Sbjct 480 HASDPIAWWNTDLLFSKPDWLREPRGYDVSPHTEWIPVVTFLQVSADMAVAVDVPDGHGH 539 Query 548 RYVATVADGWAAVLSPPGWTQQKTERLQPLLHAN 581 YV VAD WAA++ PPGWT +KTERL+PLL N Sbjct 540 VYVKNVADAWAAIMRPPGWTPEKTERLRPLLTNN 573 >gi|119870262|ref|YP_940214.1| hypothetical protein Mkms_4232 [Mycobacterium sp. KMS] gi|126436959|ref|YP_001072650.1| hypothetical protein Mjls_4388 [Mycobacterium sp. JLS] gi|119696351|gb|ABL93424.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126236759|gb|ABO00160.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=565 Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/543 (74%), Positives = 457/543 (85%), Gaps = 0/543 (0%) Query 39 RSTWWIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVR 98 + WW+RHYTF GTA GLVFVWFS+TPSLLPRGPLFQGLVSG GA GY +GVFAVWL R Sbjct 20 KRAWWLRHYTFFGTATGLVFVWFSLTPSLLPRGPLFQGLVSGGAGAAGYAIGVFAVWLTR 79 Query 99 YMRSHNSSPPPPRWAWPPLIAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAA 158 YM S ++SPP P+WAW L+ VG VG V M V FHVWQD +RDLMGV + ++D+PL A Sbjct 80 YMLSRDTSPPAPKWAWVALVVVGVVGQVLMIVYFHVWQDQIRDLMGVPRMGFWDHPLTAV 139 Query 159 LSLVVLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFA 218 L++VVLF LVE+GQ IR L FLV Q++R+AP RVSA +VV LL+ L+I LLNGVV++ Sbjct 140 LAIVVLFALVEVGQLIRRLVVFLVRQLNRVAPPRVSAVVVVALLLALSIALLNGVVVRGL 199 Query 219 MNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAF 278 M+++N+TF VN+E +PD+ P++PLRSGGP SLVSWESLGHQGR+FV GPT+A+L+AF Sbjct 200 MSAINNTFETVNDETDPDTPAPESPLRSGGPQSLVSWESLGHQGRVFVSGGPTVAELSAF 259 Query 279 NGTPAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGTGWINEAEAS 338 NG PA+EPIR YAGLNSADGI ATA LAA EL RTGGL RAVVAVAT+TGTGWINEAEAS Sbjct 260 NGAPAIEPIRAYAGLNSADGIRATARLAAEELLRTGGLNRAVVAVATTTGTGWINEAEAS 319 Query 339 ALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLV 398 ALEYM+NGDTAIVSMQYSFLPSWLSFLVDKENAR AG+ALFEAVD L+R++PE+QRP+LV Sbjct 320 ALEYMFNGDTAIVSMQYSFLPSWLSFLVDKENARQAGQALFEAVDALVREMPEAQRPRLV 379 Query 399 VFGESLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDD 458 VFGESLGSFGGEAPF+ LNN++ARTDGALFSGPTFNNT+WN LT RD GSPQWLPIYD Sbjct 380 VFGESLGSFGGEAPFLALNNLIARTDGALFSGPTFNNTIWNELTRQRDPGSPQWLPIYDS 439 Query 459 GRNVRFVARARDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLP 518 G NVRFVAR DL RPD PWG PRVVYLQHASDPIAWW P LLF PDWL+E GYD Sbjct 440 GENVRFVARPDDLDRPDRPWGTPRVVYLQHASDPIAWWNPDLLFARPDWLKEPPGYDRTA 499 Query 519 QTRWIPVVTFVQVSADMAVATHVPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLL 578 + +WIPVVTF+QVSADMAVA VPDGHGH YV V +GWAAVL PPGWT +KTERL+P+L Sbjct 500 RMKWIPVVTFLQVSADMAVAVDVPDGHGHVYVRDVVNGWAAVLQPPGWTPEKTERLRPVL 559 Query 579 HAN 581 H++ Sbjct 560 HSD 562 >gi|169628600|ref|YP_001702249.1| hypothetical protein MAB_1509 [Mycobacterium abscessus ATCC 19977] gi|169240567|emb|CAM61595.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=583 Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/562 (69%), Positives = 445/562 (80%), Gaps = 5/562 (0%) Query 21 EQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSG 80 EQ AA +T P WW+R YTFTGTA+GLVF+W SMTPSLLPRGPLFQ LVSG Sbjct 27 EQETAPAAASKTTRP-----GWWVRQYTFTGTAVGLVFLWLSMTPSLLPRGPLFQALVSG 81 Query 81 ICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAVGAVGMVGMAVQFHVWQDDVR 140 GA GY LGV VWLVRYMRS +SSP P AW L+ +G +G V M V FH WQD VR Sbjct 82 GSGAIGYALGVLVVWLVRYMRSQDSSPKAPPVAWRILVVLGLIGTVLMIVWFHFWQDRVR 141 Query 141 DLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVV 200 DLMGV L ++ +P A +S++VLF LVE+GQ IR L FL+ +++R+AP RVSA + V Sbjct 142 DLMGVPRLSFWAHPQTAVMSIIVLFVLVEMGQQIRRLILFLIERLNRVAPKRVSAVVAVT 201 Query 201 LLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGH 260 L+VVL + L+NGVV++ AM+ +N+TF+AVNNE NPD+ P T LRSGGPGSLVSW SLG+ Sbjct 202 LVVVLAMALINGVVVRVAMDFLNNTFSAVNNEENPDNPAPTTSLRSGGPGSLVSWASLGN 261 Query 261 QGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAV 320 QGR FV G T +L+AFN TPA EPIR YAGL SADGI ATAELAAREL R GGL R V Sbjct 262 QGRAFVGGGATAQELSAFNKTPATEPIRAYAGLESADGIKATAELAARELEREGGLHRKV 321 Query 321 VAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFE 380 VAVAT+TGTGWIN+AEA ALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENAR AG+ALFE Sbjct 322 VAVATTTGTGWINQAEADALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARQAGQALFE 381 Query 381 AVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTVWNS 440 AV +R +PE+ RPKLVVFGESLGSFGGEAPF+++NNI+ARTDGALFSGPTFNN++W Sbjct 382 AVSARVRAMPEAVRPKLVVFGESLGSFGGEAPFLSVNNIVARTDGALFSGPTFNNSMWLE 441 Query 441 LTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGRPRVVYLQHASDPIAWWTPRL 500 T NRD GSP+ LPIYD GRNVRFV+R DL+RP PW RPR+VYLQHASDPIAW+ P L Sbjct 442 ATHNRDDGSPEVLPIYDQGRNVRFVSRPEDLKRPADPWARPRIVYLQHASDPIAWFNPDL 501 Query 501 LFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRYVATVADGWAAV 560 + +PDWLRE RGYDVLP WIP VTF+QVSADMAVA VPDGHGH YV VAD WAAV Sbjct 502 ILSKPDWLREPRGYDVLPSMEWIPFVTFLQVSADMAVAVDVPDGHGHVYVKAVADAWAAV 561 Query 561 LSPPGWTQQKTERLQPLLHANA 582 L PPGWT +KT+RL+PLLH+ A Sbjct 562 LQPPGWTPEKTQRLRPLLHSGA 583 >gi|108801121|ref|YP_641318.1| hypothetical protein Mmcs_4157 [Mycobacterium sp. MCS] gi|108771540|gb|ABG10262.1| conserved hypothetical protein [Mycobacterium sp. MCS] Length=563 Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/543 (74%), Positives = 455/543 (84%), Gaps = 0/543 (0%) Query 39 RSTWWIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVR 98 + WW+RHYTF GTA GLVFVWFS+TPSLLPRGPLFQGLVSG GA GY +GVFAVWL R Sbjct 20 KRAWWLRHYTFFGTATGLVFVWFSLTPSLLPRGPLFQGLVSGGAGAAGYAIGVFAVWLTR 79 Query 99 YMRSHNSSPPPPRWAWPPLIAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAA 158 YM S ++SPP P+WAW L+ VG VG V M V FHVWQD +RDLMGV + ++D+PL A Sbjct 80 YMLSRDTSPPAPKWAWVALVVVGVVGQVLMIVYFHVWQDQIRDLMGVPRMGFWDHPLTAV 139 Query 159 LSLVVLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFA 218 L++VVLF LVE+GQ IR L FLV Q++R+AP RVSA +VV LL+ L+I LLNGVV++ Sbjct 140 LAIVVLFALVEVGQLIRRLVVFLVRQLNRVAPPRVSAVVVVALLLALSIALLNGVVVRGL 199 Query 219 MNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAF 278 M+++N+TF VN+E +PD+ P++PLRSGGP SLVSWESLGHQGR+FV GPT+A+L+AF Sbjct 200 MSAINNTFETVNDETDPDTPAPESPLRSGGPQSLVSWESLGHQGRVFVSGGPTVAELSAF 259 Query 279 NGTPAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGTGWINEAEAS 338 NG PA+EPIR YAGLNSADGI ATA LAA EL RTGGL RAVVAVAT+TGTGWINEAEAS Sbjct 260 NGAPAIEPIRAYAGLNSADGIRATARLAAEELLRTGGLNRAVVAVATTTGTGWINEAEAS 319 Query 339 ALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLV 398 ALEYM+NGDTAIVSMQYSFLPSWLSFLVDKENAR AG+ALFEAVD L+R++PE+QRP+LV Sbjct 320 ALEYMFNGDTAIVSMQYSFLPSWLSFLVDKENARQAGQALFEAVDALVREMPEAQRPRLV 379 Query 399 VFGESLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDD 458 VFGESLGSFGGEAPF+ LNN++ARTDGALFSGPTFNNT+WN LT RD GSPQWLPIYD Sbjct 380 VFGESLGSFGGEAPFLALNNLIARTDGALFSGPTFNNTIWNELTRQRDPGSPQWLPIYDS 439 Query 459 GRNVRFVARARDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLP 518 G NVRFVAR DL RPD PWG PRVVYLQHASDPIAWW P LLF PDWL+E GYD Sbjct 440 GENVRFVARPDDLDRPDRPWGTPRVVYLQHASDPIAWWNPDLLFARPDWLKEPPGYDRTA 499 Query 519 QTRWIPVVTFVQVSADMAVATHVPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLL 578 + +WIPVVTF+QVSADMAVA VPDGHGH YV V +GWAAVL PPGWT +KTERL+P+L Sbjct 500 RMKWIPVVTFLQVSADMAVAVDVPDGHGHVYVRDVVNGWAAVLQPPGWTPEKTERLRPVL 559 Query 579 HAN 581 A Sbjct 560 TAT 562 >gi|296138667|ref|YP_003645910.1| hypothetical protein Tpau_0938 [Tsukamurella paurometabola DSM 20162] gi|296026801|gb|ADG77571.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=627 Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/567 (63%), Positives = 433/567 (77%), Gaps = 5/567 (0%) Query 20 AEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVS 79 E+A TAA + +WW YTFTGTA+GLVFVW S+TPSLLPRGPLFQ LVS Sbjct 53 GEKAPSTAAQAEAESVLDRFGSWWSGRYTFTGTAIGLVFVWLSLTPSLLPRGPLFQSLVS 112 Query 80 GICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAVGAVGMVGMAVQFHVWQDDV 139 G GA GYG+GVFAVWLVR+M+S +SSP P W LI +G +G +GM V F WQD++ Sbjct 113 GGSGAIGYGIGVFAVWLVRFMQSKDSSPRAPARYWLVLIGIGVLGTIGMVVWFDRWQDEL 172 Query 140 RDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVV 199 RD+M EHL DY A LS+V+L+ LVEI + IRW+ R+L+GQ+++++P RVSA + V Sbjct 173 RDMMQTEHLVPIDYVEIAVLSVVLLYVLVEIAKGIRWVIRWLIGQLNKVSPPRVSAVVAV 232 Query 200 VLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLG 259 L++VL++ ++NGVV++ AM++MN+TF+ VN E D P +PLRSGGPGSLVSW SLG Sbjct 233 ALVLVLSVGIINGVVVRGAMDAMNTTFSKVNREGGNDRPAPTSPLRSGGPGSLVSWPSLG 292 Query 260 HQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADG-----IMATAELAARELARTG 314 QGRIFV + T+ L+AFNG PA+EPIRTYAGL S D AE AA EL RTG Sbjct 293 KQGRIFVSNAQTVEHLSAFNGAPAMEPIRTYAGLGSIDASDPNRYKVIAEQAANELERTG 352 Query 315 GLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHA 374 GL+R +VAVAT+TGTGW+NEAEA ALEYMYNGD+AIVSMQYSFLPSWLSFLVDK+NA A Sbjct 353 GLQRKIVAVATTTGTGWVNEAEAGALEYMYNGDSAIVSMQYSFLPSWLSFLVDKQNALQA 412 Query 375 GEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNILARTDGALFSGPTFN 434 G+ALFEAVDK ++ LPE QRPKLV+FGESLGSFGGEAPF++ NNILARTDGALFSGPTFN Sbjct 413 GQALFEAVDKKVKSLPEGQRPKLVIFGESLGSFGGEAPFLSPNNILARTDGALFSGPTFN 472 Query 435 NTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGRPRVVYLQHASDPIA 494 N +W +T RD GSP+WLP+Y G N+RF A A DL +P+ PW PRVVYLQHASDPI Sbjct 473 NEMWVQMTRQRDGGSPEWLPVYQQGANIRFAASAEDLTKPEQPWAYPRVVYLQHASDPIG 532 Query 495 WWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRYVATVA 554 W P L F +PDW+RE+RG DVL WIP+V+F+QVSADMAVA +VPDGHGH YV A Sbjct 533 RWKPELAFSKPDWMREKRGPDVLSSVSWIPIVSFLQVSADMAVAVNVPDGHGHSYVKAAA 592 Query 555 DGWAAVLSPPGWTQQKTERLQPLLHAN 581 D WAA+L PPGW +KT RL+P+L++ Sbjct 593 DAWAAILEPPGWNPEKTARLRPILNSQ 619 >gi|343928501|ref|ZP_08767949.1| hypothetical protein GOALK_117_01070 [Gordonia alkanivorans NBRC 16433] gi|343761686|dbj|GAA14875.1| hypothetical protein GOALK_117_01070 [Gordonia alkanivorans NBRC 16433] Length=584 Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/547 (59%), Positives = 395/547 (73%), Gaps = 4/547 (0%) Query 39 RSTWWIRH---YTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVW 95 R WW R ++ G ++ LVF+W SMTPSLLPRG LFQG+VSG A GY LGVF W Sbjct 38 RPGWWRRRLDRFSCVGLSVALVFLWLSMTPSLLPRGALFQGVVSGASAALGYSLGVFFSW 97 Query 96 LVRYMRSHNSS-PPPPRWAWPPLIAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYP 154 L+R+M S + P P W L G + M V F WQD +R +M V+ L W YP Sbjct 98 LIRFMISRDKPWPAPMHRVWVALGLAAIAGTLVMLVMFQRWQDQIRTMMDVDLLSWTAYP 157 Query 155 LAAALSLVVLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVV 214 A + +VV F L+ IGQ +LV +++ +AP R+SA +V+ +++T+ +LNGVV Sbjct 158 QIAVIFIVVFFLLILIGQAWGDGVVWLVRKINHVAPPRISAVAAIVVAILVTVFVLNGVV 217 Query 215 LKFAMNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIAD 274 + M ++NS+FAAVN+E DS PP +PLRSGGPGSLV+W+SLG QGRIFV GPT+ + Sbjct 218 ANYGMKALNSSFAAVNDETTADSTPPTSPLRSGGPGSLVTWDSLGRQGRIFVSVGPTVEE 277 Query 275 LTAFNGTPAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGTGWINE 334 L+AFNGTPA+EPIR Y GL S D + A A+LAA EL RTGGL+R VVAVA++TGTGWIN+ Sbjct 278 LSAFNGTPAMEPIRAYVGLGSGDDLRANAKLAAEELERTGGLQRQVVAVASTTGTGWINQ 337 Query 335 AEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQR 394 A +LEYMYNGDTA VSMQYS+LPSWLSFLVDKE AR AG+ALFEAV + +R +PE+QR Sbjct 338 ATVDSLEYMYNGDTATVSMQYSYLPSWLSFLVDKERARQAGQALFEAVSERVRAIPEAQR 397 Query 395 PKLVVFGESLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLP 454 PKLVVFGESLGSF E+ F + ++ ARTDGALF GPTFNN++W T NRD G+P+W P Sbjct 398 PKLVVFGESLGSFAAESAFGTIPSLNARTDGALFVGPTFNNSLWVDTTTNRDPGTPEWQP 457 Query 455 IYDDGRNVRFVARARDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWLREQRGY 514 +Y+DGR VRF+A A DL W R VYLQHASDPI+WW+PRL+ REPDWL E RG Sbjct 458 VYEDGRQVRFIADAPDLYNAKGEWVPGRAVYLQHASDPISWWSPRLILREPDWLNEARGR 517 Query 515 DVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRYVATVADGWAAVLSPPGWTQQKTERL 574 DVLP WIP VTF+QVSADMAV+T VPDGHGH Y+A + WA +L PPGWT +KTE+L Sbjct 518 DVLPAMHWIPFVTFLQVSADMAVSTGVPDGHGHFYLAAIPAAWAEILQPPGWTPEKTEKL 577 Query 575 QPLLHAN 581 PLL + Sbjct 578 IPLLSRD 584 >gi|262202637|ref|YP_003273845.1| hypothetical protein Gbro_2734 [Gordonia bronchialis DSM 43247] gi|262085984|gb|ACY21952.1| conserved hypothetical protein [Gordonia bronchialis DSM 43247] Length=599 Score = 609 bits (1571), Expect = 3e-172, Method: Compositional matrix adjust. Identities = 326/576 (57%), Positives = 395/576 (69%), Gaps = 11/576 (1%) Query 12 ASDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRH---YTFTGTAMGLVFVWFSMTPSLL 68 A+D P T + + T TP + WW R Y+F G LVF+W S TPSLL Sbjct 29 AADAPPTAS---MTTGTATSTPRARSGLDGWWYRQRCRYSFVGMTFALVFLWLSATPSLL 85 Query 69 PRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAVGAVGMVGM 128 PR LFQG VSG A GY LGVF WL R+M S P R + +G + ++G Sbjct 86 PREALFQGAVSGASAALGYCLGVFLAWLARFMVSRPEPWQPARLRF--WTVLGVIALIGT 143 Query 129 AVQFHVW---QDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRFLVGQV 185 V + W QD++RDLMGVE L W YPL L+ +V F L+ IGQ R+LV ++ Sbjct 144 TVMIYWWGHRQDEIRDLMGVERLSWTAYPLTVVLAALVFFLLMSIGQAWASAVRWLVRKL 203 Query 186 DRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPPKTPLR 245 + IAP RVSA + + VV T+ +LNGVV ++M +NSTFAAVN+E DS PP + LR Sbjct 204 ELIAPPRVSAVVAGTVAVVFTLFVLNGVVANYSMQWLNSTFAAVNDETTADSTPPTSSLR 263 Query 246 SGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIMATAEL 305 SGGPGSLV+W+SLG QGRIFV +GPT L+AFN PA EPIR+Y GL S + A A+L Sbjct 264 SGGPGSLVTWDSLGRQGRIFVSNGPTREALSAFNRAPAAEPIRSYVGLGSGSDLRANAQL 323 Query 306 AARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFL 365 AA EL R GGL RAVVA+ ++TGTGWIN + +LEYMYNG+TA VSMQYS+LPSWLSFL Sbjct 324 AAAELERAGGLDRAVVAIGSTTGTGWINRSTVDSLEYMYNGNTATVSMQYSYLPSWLSFL 383 Query 366 VDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNILARTDG 425 VD+E AR AG ALFEAVD+ IR PE+QRPK+VVFGESLGSF E+ F + + ARTDG Sbjct 384 VDQERARQAGRALFEAVDERIRARPEAQRPKVVVFGESLGSFAAESAFGTIPALSARTDG 443 Query 426 ALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGRPRVVY 485 ALF GPTFNNT+W T +RD GSP+WLPIY DG RF+A A DL RPDAPW R+VY Sbjct 444 ALFVGPTFNNTLWIDTTRDRDPGSPEWLPIYHDGLQARFIADAGDLARPDAPWKPGRIVY 503 Query 486 LQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATHVPDGH 545 LQHASDPI WW+P L+ +PDWLRE+RG DVL WIP VTF+QVSADMAV+T VPDGH Sbjct 504 LQHASDPITWWSPDLILDKPDWLREKRGPDVLSSMHWIPFVTFLQVSADMAVSTGVPDGH 563 Query 546 GHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHAN 581 GH Y+A + WAA+L PPGWT KT+ L+PLL + Sbjct 564 GHNYLAAIPWAWAAILQPPGWTAAKTDALEPLLRRD 599 >gi|326384940|ref|ZP_08206614.1| hypothetical protein SCNU_18437 [Gordonia neofelifaecis NRRL B-59395] gi|326196330|gb|EGD53530.1| hypothetical protein SCNU_18437 [Gordonia neofelifaecis NRRL B-59395] Length=581 Score = 599 bits (1544), Expect = 6e-169, Method: Compositional matrix adjust. Identities = 311/541 (58%), Positives = 382/541 (71%), Gaps = 2/541 (0%) Query 43 WIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRS 102 +I ++ G + V +WFS+TPSLLPRGPLFQGLVS A GY +G F WL RY+ S Sbjct 41 YIARLSYGGLVVATVLLWFSVTPSLLPRGPLFQGLVSAAAAAVGYAIGAFFTWLARYLVS 100 Query 103 HNSS-PPPPRWAWPPLIAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSL 161 P P RW W L VG M + WQD++RDLMGVEHL W YP+ A+++ Sbjct 101 RKEPWPRPGRWWWVGLGVFFVVGTGVMLYWYRRWQDELRDLMGVEHLDWTAYPIIVAVAV 160 Query 162 VVLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNS 221 VV L+ IGQ L R L + R P R+SA +V++++ +LNG V + M + Sbjct 161 VVFAILLGIGQAWGALVRMLARWLSRRIPPRISAITAATAVVIVSVFILNGAVADYGMTA 220 Query 222 MNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGT 281 +N++FAA+N E NPDSAPP + LRSGGP SLVSWESLG GR FV +GPT+A L FN Sbjct 221 LNNSFAALNEETNPDSAPPTSTLRSGGPESLVSWESLGRMGRTFVSTGPTVAQLEEFNKA 280 Query 282 PAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALE 341 PA EPIR YAGL S D I A+AELAA+EL RTGGL+R VV VA STGTGW+N+A +LE Sbjct 281 PAKEPIRVYAGLESTDSIQASAELAAQELVRTGGLQRKVVGVAGSTGTGWVNQANLDSLE 340 Query 342 YMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFG 401 YMYNGDTA+VSMQYS LPSWLSFLVD+E AR AG ALFEAVD+L+R++PE+QRPK+VVFG Sbjct 341 YMYNGDTAMVSMQYSMLPSWLSFLVDQERARQAGRALFEAVDRLVRRIPEAQRPKIVVFG 400 Query 402 ESLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRN 461 ESLGSFG EAPF ++ + ARTDGAL +GPTF+NT W TA+RD GS + LP +DG Sbjct 401 ESLGSFGAEAPFGSVATMNARTDGALLTGPTFSNTTWVDTTADRDPGSLEVLPTVNDGDE 460 Query 462 VRFVARARDLQR-PDAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQT 520 VRF+ +DL D PW R+VYLQHASDPI+WW P L+ +PDWL+E RG DVLP Sbjct 461 VRFINTEKDLAAFGDKPWEPGRIVYLQHASDPISWWNPDLILNKPDWLKEPRGSDVLPSV 520 Query 521 RWIPVVTFVQVSADMAVATHVPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHA 580 +W+P VTF+QV+ADMAVA VPDGHGH Y+ + WAA+LSPPGWT +KT L P LH Sbjct 521 QWMPFVTFLQVAADMAVAVDVPDGHGHHYLEAIPHAWAAILSPPGWTAEKTAALLPRLHR 580 Query 581 N 581 + Sbjct 581 D 581 >gi|111020761|ref|YP_703733.1| hypothetical protein RHA1_ro03775 [Rhodococcus jostii RHA1] gi|110820291|gb|ABG95575.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=567 Score = 579 bits (1492), Expect = 6e-163, Method: Compositional matrix adjust. Identities = 297/555 (54%), Positives = 378/555 (69%), Gaps = 9/555 (1%) Query 34 EPQPIR----STWWIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGL 89 E P+R W Y F G + ++FVW S+TP+LLPRGP FQGLV+G+ A GY + Sbjct 9 EAGPVRPPGYRRWLPDRYAFGGLVVAVLFVWLSLTPTLLPRGPFFQGLVTGVSAAIGYAI 68 Query 90 GVFAVWLVRYMRSHNSSPPPPRWAWPPLIAV-GAVGMVGMAVQFHVWQDDVRDLMGVEHL 148 G L+RY+ H +P + + +V G VG M V F WQ +R +M Sbjct 69 GFLGSKLIRYL-VHREAPARVKTVVRRVASVIGIVGTAAMLVWFWDWQSQLRAIMSAAPF 127 Query 149 RWYDYPLAAALSLVVLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVVLTIT 208 W+ Y + +++++ LV + + + ++ ++ R+ P R+SA ++ VL+V L Sbjct 128 PWFGYLVMVIVAVLIYVGLVALARVLLRAVWWVERKISRVVPRRISATVIGVLVVALLFA 187 Query 209 LLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHS 268 L+NG ++ M+ +N++FAAVN E PP + LRSGGP SLV+W+SLG QGR F+ Sbjct 188 LVNGAAVRVIMSGLNNSFAAVNQETKAGDEPPTSSLRSGGPDSLVTWDSLGRQGRSFMSR 247 Query 269 GPTIADLTAFNG-TPAVEPIRTYAGLNSA-DGIMATAELAARELARTGGLRRAVVAVATS 326 GPT+ +L+ FNG PAVEPIRTYAGL S D I A+LAA EL R GG RAVV VAT+ Sbjct 248 GPTVDELSTFNGGRPAVEPIRTYAGLASGGDSIRENAQLAADELERAGGFDRAVVGVATT 307 Query 327 TGTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLI 386 TGTGWINE+ AS+LEYMYNGDTA+V +QYS+LPSWLSFLVDKE A AGEALF+AV Sbjct 308 TGTGWINESLASSLEYMYNGDTAMVGLQYSYLPSWLSFLVDKERAHQAGEALFDAVYDKW 367 Query 387 RQLPESQRPKLVVFGESLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRD 446 + LP RPKLVV GESLGSFGGE+ F +++++ ARTDG LF+GP N +W +T NRD Sbjct 368 KVLPPGSRPKLVVMGESLGSFGGESAFGSVDDVEARTDGVLFTGPPNANEIWTDVTTNRD 427 Query 447 AGSPQWLPIYDDGRNVRFVARA-RDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREP 505 GSP+WLPIY+ G VRF ARA DL RPDAPWGRPR+VYLQH SDPI WW+P LL EP Sbjct 428 PGSPEWLPIYEQGETVRFGARAPEDLPRPDAPWGRPRMVYLQHPSDPIVWWSPELLLSEP 487 Query 506 DWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRYVATVADGWAAVLSPPG 565 DWL+E RGYDVL T+W P VTF+QV+ADMAV+T VPDGHGH YV +AD W+A+LSP G Sbjct 488 DWLKEDRGYDVLDSTQWFPFVTFLQVAADMAVSTGVPDGHGHTYVVDIADAWSAILSPEG 547 Query 566 WTQQKTERLQPLLHA 580 WT TERL+ L A Sbjct 548 WTPADTERLRTTLAA 562 >gi|226363040|ref|YP_002780822.1| hypothetical protein ROP_36300 [Rhodococcus opacus B4] gi|226241529|dbj|BAH51877.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=572 Score = 575 bits (1483), Expect = 6e-162, Method: Compositional matrix adjust. Identities = 297/562 (53%), Positives = 382/562 (68%), Gaps = 5/562 (0%) Query 22 QAVDTAATPQT-PEPQPIRSTWWIRH-YTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVS 79 +D A +T P P R W+ H Y F G + L+FVW S+TP+LLPRGP FQGLV+ Sbjct 4 DVIDGAPPHETGPARPPERHRRWLPHRYAFGGLVVALLFVWLSLTPTLLPRGPFFQGLVT 63 Query 80 GICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAVGAVGMVGMAVQFHVWQDDV 139 G+ A GYGLG VRY+ + P +A+G +G V M V F WQ + Sbjct 64 GVSAAVGYGLGFLGSKFVRYLVQREAPPRAKVVVRRVALAIGILGTVVMLVWFGNWQSQL 123 Query 140 RDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVV 199 R++M W Y + +++++ V + + + R++ ++ R+ P R+SA ++ Sbjct 124 REIMSAAAFPWTGYLVMVIVAVLIFVLFVAVARVLLRAVRWVERKISRVVPRRISATVIG 183 Query 200 VLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLG 259 V++V L + L+NG V++ M +N++FAAVN E PP +PLRSGGP SLV+W+SLG Sbjct 184 VVVVALLVALVNGAVVRVIMTGLNNSFAAVNQETKAGDEPPTSPLRSGGPESLVTWDSLG 243 Query 260 HQGRIFVHSGPTIADLTAFN-GTPAVEPIRTYAGLNSA-DGIMATAELAARELARTGGLR 317 QGR F+ PT+ +L+AFN G PA+EPIRTYAGL S D I A++AA EL R GG Sbjct 244 RQGRSFISRAPTVDELSAFNDGRPALEPIRTYAGLASGGDSIRENAQVAADELERAGGFD 303 Query 318 RAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEA 377 RAVV VAT+TGTGWINEA S+LEYMYNGDT +V +QYS+LPSWLSFLVDKE A AGEA Sbjct 304 RAVVGVATTTGTGWINEALVSSLEYMYNGDTGMVGLQYSYLPSWLSFLVDKERAHQAGEA 363 Query 378 LFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTV 437 LF+AV + LP RPKLVV GESLGSFGGE+ F N++++ ART+G LF+GP N + Sbjct 364 LFDAVYDKWKVLPPETRPKLVVMGESLGSFGGESAFGNVDDVEARTNGVLFTGPPNANEI 423 Query 438 WNSLTANRDAGSPQWLPIYDDGRNVRFVARA-RDLQRPDAPWGRPRVVYLQHASDPIAWW 496 W +T NRD GSP+WLPIY++G VRF ARA DL RPDAPWG PR+VYLQH SDPI WW Sbjct 424 WTDVTTNRDPGSPEWLPIYEEGETVRFGARAPEDLPRPDAPWGLPRMVYLQHPSDPIVWW 483 Query 497 TPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRYVATVADG 556 +P LL EPDWL+E+RGYDVL T+W P VTF+QV+ADMAV+T VPDGHGH YV +AD Sbjct 484 SPELLLSEPDWLKEERGYDVLDSTQWFPFVTFLQVAADMAVSTGVPDGHGHSYVVDIADA 543 Query 557 WAAVLSPPGWTQQKTERLQPLL 578 W+A+L P GWT ERL+ +L Sbjct 544 WSAILPPDGWTPADNERLRAVL 565 >gi|340795590|ref|YP_004761053.1| hypothetical protein CVAR_2639 [Corynebacterium variabile DSM 44702] gi|340535500|gb|AEK37980.1| putative membrane protein [Corynebacterium variabile DSM 44702] Length=546 Score = 546 bits (1406), Expect = 5e-153, Method: Compositional matrix adjust. Identities = 280/526 (54%), Positives = 362/526 (69%), Gaps = 11/526 (2%) Query 63 MTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPP------RWAWPP 116 MTPSLLPRGPLFQG+VS C A GY +GVFA WL RYM + + + RW W P Sbjct 1 MTPSLLPRGPLFQGVVSAACAAVGYMIGVFASWLFRYMLNRDPAEQKRGRTLSWRW-WVP 59 Query 117 LIAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRW 176 L A+ AVG QF VWQ++VRDL+G HL W +P+ +++VV LV +GQ Sbjct 60 LGAIAAVGSGIGLWQFRVWQNEVRDLVGEGHLSWTAWPVTVIVAVVVFLVLVLLGQGWGK 119 Query 177 LFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPD 236 L R L + R+ P R++ + ++V ++ L NGVV +++ +N++FA N++ Sbjct 120 LVRTLNDWLHRVLPPRIARVAAIAVVVAFSVFLANGVVANYSLQFLNASFATANDDTTET 179 Query 237 SAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSA 296 S P + +RSG SLVSWESLG +GR FV GP L NG AVEPIRT+ GL S Sbjct 180 SVKPTSEMRSGSDASLVSWESLGREGRKFVSHGPDTDQLAEINGFRAVEPIRTFVGLGSG 239 Query 297 DGIMATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYS 356 D + A AELAA EL R GG+ R ++AV ++TG+GWIN+A +LEYMYNG+ A VSMQYS Sbjct 240 DDLRANAELAAEELVRAGGMGRELIAVGSATGSGWINQATVDSLEYMYNGNIATVSMQYS 299 Query 357 FLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNL 416 +LPSWLSFLVD+E AR AG LFEAVD I++LPE++RPK+VVFGESLGSFG EA F + Sbjct 300 YLPSWLSFLVDQEQARQAGLYLFEAVDAKIQELPENRRPKIVVFGESLGSFGAEAAFGTI 359 Query 417 NNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDA 476 + ARTDGALF+GPTFNN +W T RDAGSP+ LP+YD G ++RF A A DL PD Sbjct 360 PTLSARTDGALFTGPTFNNGLWREATGRRDAGSPERLPVYDGGEHIRFAAEAGDLDDPDT 419 Query 477 PWGRPRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMA 536 W PR+ YLQHASDPI+WW+P L+F EPDWL+E RG DVL TRW+P+V+F+QVSADMA Sbjct 420 EWKEPRIAYLQHASDPISWWSPELIFNEPDWLKESRGADVLSSTRWLPIVSFLQVSADMA 479 Query 537 VATHVPDGHGHRYVATVADGWAAVLSPPGWT----QQKTERLQPLL 578 V+T VP+GHGH+Y++ + WA +L P GWT ++K E++ P + Sbjct 480 VSTDVPEGHGHKYISEIPRAWAKILEPAGWTGGEGEKKLEQIIPRM 525 >gi|296269602|ref|YP_003652234.1| membrane protein [Thermobispora bispora DSM 43833] gi|296092389|gb|ADG88341.1| membrane protein [Thermobispora bispora DSM 43833] Length=566 Score = 454 bits (1168), Expect = 2e-125, Method: Compositional matrix adjust. Identities = 254/545 (47%), Positives = 328/545 (61%), Gaps = 17/545 (3%) Query 51 GTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPP 110 G+ + VF S+TPSLLPR L QG+++G+ A GY GV +R RS P P Sbjct 17 GSIVAAVFFCLSLTPSLLPRSWLIQGIIAGVVTAAGYLTGVILGTALR--RSIAWRPRPE 74 Query 111 R-----WAWPPLIA--VGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPL-AAALSLV 162 R W L+A A + G Q H++ + DL E L + P+ AAA+ LV Sbjct 75 RRRAIRWVITALVAGMCTASLIAGARDQRHIYA--LMDLAPPERLGYLGVPVVAAAVFLV 132 Query 163 VLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSM 222 L T + +R R L G + R P V+ + + VL +L GV+ + +++ Sbjct 133 FLLT----ARVLRIAARALSGLLVRWVPALVAEIAAALCVAVLVFSLAEGVLAESLLDAA 188 Query 223 NSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTP 282 +++FAA+N E P + PP++ SGGP SLVSWESLG QGR FV P + +L FNG Sbjct 189 DTSFAAINQETTPGTTPPRSAALSGGPSSLVSWESLGRQGRDFVAGAPGLEELRRFNGRT 248 Query 283 AVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEY 342 VEPIR Y GL+SA + A LA REL RTG R V+ V T+TGTGW++ A+ALE+ Sbjct 249 PVEPIRVYVGLDSAATLRERAALAVRELERTGAFSRKVLCVITTTGTGWVDPQAAAALEF 308 Query 343 MYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGE 402 MYNGDTA+V+MQYS+LPSWLSFLVD++ A+ AG LF+ V + +LP RPKL+VFGE Sbjct 309 MYNGDTALVAMQYSYLPSWLSFLVDRDRAQAAGRELFQQVYERWSRLPREHRPKLLVFGE 368 Query 403 SLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNV 462 SLG+FG E+ F ++ RTDGALF GP ++ + RD GS + LPIY G V Sbjct 369 SLGAFGAESAFTGDQDLRDRTDGALFVGPPDSSVLRRRFVHGRDPGSTEVLPIYRKGETV 428 Query 463 RFVARARDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRW 522 RF R DL P APW PRVVYLQH SDPI WW+PRLLF +PDWL E RG DVLP RW Sbjct 429 RFANRPADLAEPSAPWDPPRVVYLQHPSDPIVWWSPRLLFEKPDWLSEPRGADVLPHIRW 488 Query 523 IPVVTFVQVSADMAVATHVPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANA 582 P+VTF Q++AD+A A VP GHGH Y V WA + +P GWT ++T L L+ A Sbjct 489 YPIVTFSQITADLAFALDVPPGHGHNYDGEVVAAWARIAAPEGWTDERTAELTALIQ-RA 547 Query 583 KPFGS 587 P G Sbjct 548 HPIGK 552 >gi|54022541|ref|YP_116783.1| hypothetical protein nfa5740 [Nocardia farcinica IFM 10152] gi|54014049|dbj|BAD55419.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=594 Score = 431 bits (1107), Expect = 3e-118, Method: Compositional matrix adjust. Identities = 252/540 (47%), Positives = 322/540 (60%), Gaps = 7/540 (1%) Query 48 TFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVR-YMRSHNSS 106 + G + VF S+TPSL+PR LFQGL+SGI A GYGLG WL R ++R Sbjct 46 NYVGLVVATVFFALSVTPSLVPRDWLFQGLISGINAALGYGLGCLLEWLFRLWVRPRLKV 105 Query 107 PPPPRWAWPPL----IAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLV 162 PP P W + + A+ M VQ WQ ++ LMG+E Y LSL Sbjct 106 PPAPTWVRYAVKTAVLLTAALTAALMLVQSARWQREITALMGMEGTTTPAYLRTGLLSLA 165 Query 163 VLFTLVEIGQFIRWLFRFLVGQVDR--IAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMN 220 V +V + +R + FL Q++R P ++ A+ ++LVV +T+ NGV + Sbjct 166 VGVLVVAGYRTVREIILFLARQLNRWVRVPRELAPAVGALVLVVAAVTIFNGVASRAFFA 225 Query 221 SMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNG 280 NS F+ N+ +P++ P+ P RSG P SL +W++LG +GR FV GPT + + A G Sbjct 226 VANSAFSVRNDHTSPNAVQPQQPERSGSPESLAAWDTLGFEGRWFVSHGPTASRIAAVTG 285 Query 281 TPAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASAL 340 PA EPIR Y GL SA+ AELA REL RTG R V+ V T+TGTGW+N A A+ Sbjct 286 RPAREPIRAYVGLESAEDGEDQAELAVRELERTGAFDRQVIVVVTTTGTGWVNSLAAGAI 345 Query 341 EYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVF 400 EYM+ GDTAIV+ QYS+LPS LSFL D+ A AGE LF+AV + Q P QRPKL V+ Sbjct 346 EYMFGGDTAIVASQYSYLPSVLSFLADRGKAAAAGERLFDAVHEHWSQRPPDQRPKLFVY 405 Query 401 GESLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGR 460 GESLGS G EA F L ++ A+ DGAL+ GP +N +W A RD GSP+ LP+Y DG Sbjct 406 GESLGSQGSEAAFDGLADLRAKVDGALWVGPPNSNRLWEQFVARRDPGSPEVLPVYADGL 465 Query 461 NVRFVARARDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQT 520 VRF A DL P W PR+ YLQHASDPI WW+ L+F PDWL E RG DV Q Sbjct 466 VVRFAANPPDLAVPGPEWRSPRIAYLQHASDPIVWWSTDLIFSRPDWLSEPRGSDVSSQM 525 Query 521 RWIPVVTFVQVSADMAVATHVPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHA 580 RW P VTF QV+AD+ A V DGHGHRY + V D WAA+ PPGWT + E+++ L A Sbjct 526 RWAPFVTFWQVTADLTNAQGVADGHGHRYGSLVLDAWAAIAQPPGWTPELAEQVRFQLEA 585 >gi|333918368|ref|YP_004491949.1| hypothetical protein AS9A_0695 [Amycolicicoccus subflavus DQS3-9A1] gi|333480589|gb|AEF39149.1| Hypothetical membrane protein [Amycolicicoccus subflavus DQS3-9A1] Length=583 Score = 414 bits (1065), Expect = 2e-113, Method: Compositional matrix adjust. Identities = 252/563 (45%), Positives = 336/563 (60%), Gaps = 13/563 (2%) Query 27 AATPQTPEPQPIRSTWWIRHYTFTGTAM-GLVFVWFSMTPSLLPRGPLFQGLVSGICGAF 85 A+ P + + W+ TG AM GL F W S+TPSLLPR +QGLVSGI A Sbjct 2 ASPPSSSLRRAAHGFWYSLRLDLTGLAMAGLFFAW-SLTPSLLPREWQYQGLVSGISLAA 60 Query 86 GYGLGVFAVWLVR-YMRSHNSSPPPPRWA--WPPLIAVGA--VGMVGMAVQFHVWQDDVR 140 GY GV W R + P P R W + GA + MV + WQ+++ Sbjct 61 GYAAGVLLSWFSRSVIFPLLEWPAPSRKVVWWLRGLVGGATLILMVSALIAAAGWQNEIT 120 Query 141 DLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRFLVGQVDRIA--PFRVSAAIV 198 L+G+E Y ALSL + ++ + +R R + G + R+ P + A+ Sbjct 121 SLLGMEGTTTTGYLRTGALSLAIAAAIILTARALRVCVRVVGGGIRRLLHLPEPLVNAVG 180 Query 199 VVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESL 258 +V++ + ITL++GV+++ + NS F+ N M+ P P RSG P SLV W++L Sbjct 181 IVVVAAVVITLVDGVLVRGMVTFANSAFSVQNETMDARVIQPTEPERSGSPDSLVPWDTL 240 Query 259 GHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIMATAELAARELARTGGLRR 318 G QGR V G A+L G PA+EPIR Y GL+SAD A A+LA REL RTG R Sbjct 241 GRQGRSMVSGGLRAAELETATGRPAIEPIRAYVGLDSADSRAAQADLAVRELVRTGAFER 300 Query 319 AVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEAL 378 V+ VA++TGTGWIN + +LE +Y GDTAIV +QYSFLPS LSFLVD++ A G+ L Sbjct 301 EVLVVASTTGTGWINPSAMQSLELIYGGDTAIVGVQYSFLPSALSFLVDRDVAADTGKEL 360 Query 379 FEAV-DKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTV 437 F+AV ++ +R PE+ RP+L VFGESLGSFG EA F L ++ + GAL+ GP +N++ Sbjct 361 FDAVHEEWLRHDPEA-RPRLYVFGESLGSFGSEAAFDGLADLREKVSGALWVGPVNSNSL 419 Query 438 WNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPD--APWGRPRVVYLQHASDPIAW 495 W SLT RD GSP P Y G VRF R DL+ D APW PRV+YLQH +DP+ W Sbjct 420 WRSLTERRDPGSPAIQPTYAGGLVVRFANRVEDLEAIDEGAPWLEPRVLYLQHPTDPVVW 479 Query 496 WTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRYVATVAD 555 W+P LLF+ PDWLRE GYDV P +W P+VTF QVSAD+A A +P GHGH Y +++ D Sbjct 480 WSPELLFQRPDWLREPPGYDVSPSMQWRPIVTFWQVSADLANAARIPHGHGHLYSSSILD 539 Query 556 GWAAVLSPPGWTQQKTERLQPLL 578 GW A+ +P GWT TE+ + +L Sbjct 540 GWLAIGTPDGWTDADTEQARDIL 562 >gi|226362915|ref|YP_002780695.1| hypothetical protein ROP_35030 [Rhodococcus opacus B4] gi|226241402|dbj|BAH51750.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=557 Score = 410 bits (1055), Expect = 3e-112, Method: Compositional matrix adjust. Identities = 246/529 (47%), Positives = 307/529 (59%), Gaps = 2/529 (0%) Query 51 GTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSH-NSSPPP 109 G A L+F +SMTPSLLPR Q + +GI A GYG+G F W+VR N SP Sbjct 27 GLAFALLFFVWSMTPSLLPRPWYLQAVATGISLATGYGIGCFVAWVVRRCGVEPNFSPKT 86 Query 110 PRWAWPPLIAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVE 169 R W L+ V + V WQ VR+L+G +H Y L +S V L+ Sbjct 87 RRIGWWTLLGAAVVLVPTFLVLGSWWQQIVRELVGADHANRSYYLLILVMSFAVAALLLA 146 Query 170 IGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAV 229 G+ +R R L R P V+ VV+LV + ++NG + + N + AA Sbjct 147 AGRGLRSAARRLTAVGLRYVPAPVAKIASVVVLVAVLFLVVNGALYAGLLALANGSLAAA 206 Query 230 NNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRT 289 +++ P P RSG P S W SLG +GR FV GP+ AD+TA G PA+ PIRT Sbjct 207 DHDTAAGVTEPTAPERSGSPDSAEPWNSLGKEGRTFVAGGPSAADITALTGRPALTPIRT 266 Query 290 YAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTA 349 YAG +SA + AE EL RTG RAV+AVAT+TG GW+N+ AS+LEY+Y+GDTA Sbjct 267 YAGRDSAGTVQEVAEHVVAELKRTGAYDRAVLAVATTTGRGWVNQDVASSLEYLYDGDTA 326 Query 350 IVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGG 409 I SMQYSFLPS L+F+ D+E AG ALFEAV LP+ RPKLVVFGESLGS+GG Sbjct 327 IASMQYSFLPSPLAFIADRETPMVAGRALFEAVYAEWAALPQESRPKLVVFGESLGSYGG 386 Query 410 EAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARAR 469 +A F+ ++LAR DGAL+ G W +T NRD GS + +P+ +DG +RF Sbjct 387 QAAFVGGQDMLARVDGALWVGTPNFTEQWTRITENRDPGSFERVPVIEDGAGIRFAGDPA 446 Query 470 DLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFV 529 DL+ D PWG RVVY QHA DPI WW+ LL PDWLRE G DV P RWIP VTF Sbjct 447 DLEL-DGPWGERRVVYWQHAGDPITWWSFDLLLNRPDWLREPHGPDVDPGMRWIPFVTFW 505 Query 530 QVSADMAVATHVPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLL 578 QV+ DM + VP GHGH Y D WAA+L PPGWT TER + L Sbjct 506 QVTLDMVFSADVPPGHGHNYGEDAVDMWAAILQPPGWTPDDTERARAAL 554 >gi|226303502|ref|YP_002763460.1| hypothetical protein RER_00130 [Rhodococcus erythropolis PR4] gi|226182617|dbj|BAH30721.1| conserved hypothetical membrane protein [Rhodococcus erythropolis PR4] Length=554 Score = 409 bits (1051), Expect = 7e-112, Method: Compositional matrix adjust. Identities = 228/546 (42%), Positives = 308/546 (57%), Gaps = 6/546 (1%) Query 44 IRHYTFT----GTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRY 99 +R Y T G A LVF +SM+PSLLPR QG+ +GI A GYG+GV W++R Sbjct 8 LRLYCKTLHPVGLAFALVFFTWSMSPSLLPRAWYLQGVATGISLAMGYGVGVTVAWMIRK 67 Query 100 MRSHNS-SPPPPRWAWPPLIAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAA 158 S + W L+A + + V WQ VRDL+ +Y L Sbjct 68 CGVEPQWSDRTKKIGWRVLLAAAVILVPTFLVLGSWWQQIVRDLVEAPRTNQANYLLVLL 127 Query 159 LSLVVLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFA 218 ++L + F L+E G+ +R+ L R P + ++++ L I ++NG + Sbjct 128 IALGIWFILLEAGRGLRFTTNKLTAVALRFVPLEAAKVGSLIVIFALGIFIVNGALYNGL 187 Query 219 MNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAF 278 + N +F+ ++E P RSG P S +W+SLG +GR F+ SGPT A++TA Sbjct 188 IAFANWSFSGADHETPDGIEQPLIAERSGSPMSAEAWDSLGQEGRTFMGSGPTAAEITAL 247 Query 279 NGTPAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGTGWINEAEAS 338 G A +PIR YAG S+D I A+ EL RTGG R +AV T+TG GW+NE AS Sbjct 248 TGREAKQPIRVYAGRESSDSINGVAQRVVDELERTGGFDRGTLAVVTTTGRGWVNEDVAS 307 Query 339 ALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLV 398 A EY+ GDTAI SMQYSFLPS L+F+ D+E AG ALF AV LP RP+LV Sbjct 308 AFEYVEGGDTAIASMQYSFLPSPLAFIADRETPMIAGRALFNAVYAKWIDLPVETRPELV 367 Query 399 VFGESLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDD 458 VFGESLGS+GG+A F +++ R DGAL+ G W +T +RD+GSP+ LP+ D Sbjct 368 VFGESLGSYGGQAAFAGAQDMMTRVDGALWVGTPNFTAQWQEITDSRDSGSPEILPVIDG 427 Query 459 GRNVRFVARARDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLP 518 G+ +RF DL+ + W R+VY QHASDPI WW+ LL +PDWL+E G DV P Sbjct 428 GQAIRFAGDPEDLEL-KSDWDDDRIVYWQHASDPITWWSFDLLLNKPDWLKEPLGRDVDP 486 Query 519 QTRWIPVVTFVQVSADMAVATHVPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLL 578 W+P+VTF QV+ DM + VP GHGH Y AD WA +L P WT T++L+ LL Sbjct 487 GMTWVPLVTFWQVTLDMVFSADVPSGHGHNYGEDAADMWAKILHPEAWTSADTDKLRSLL 546 Query 579 HANAKP 584 +N +P Sbjct 547 TSNLEP 552 >gi|229491163|ref|ZP_04384991.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229321901|gb|EEN87694.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=554 Score = 407 bits (1046), Expect = 3e-111, Method: Compositional matrix adjust. Identities = 227/546 (42%), Positives = 306/546 (57%), Gaps = 6/546 (1%) Query 44 IRHYTFT----GTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRY 99 +R Y T G A LVF +SM+PSLLPR QG+ +GI A GYG+GV W++R Sbjct 8 LRLYCKTLHPVGLAFALVFFTWSMSPSLLPRAWYLQGVATGISLAMGYGVGVTVAWMIRK 67 Query 100 MRSHNS-SPPPPRWAWPPLIAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAA 158 S + W L+ + + V WQ VRDL+ +Y L Sbjct 68 CGVEPQWSDRTKKIGWRILLVAAVILVPTFLVLGSWWQQIVRDLVEAPRTNQANYLLVLM 127 Query 159 LSLVVLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFA 218 +SL + F L+E G+ +R+ L R P + ++++ L I ++NG + Sbjct 128 ISLGIWFILLEAGRGLRFTTNKLTAVALRFVPLEAAKVGSLIVIFALGIFIVNGALYNGL 187 Query 219 MNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAF 278 + N +F+ ++E P RSG P S +W+SLG +GR F+ SGPT A+++A Sbjct 188 IAFANWSFSGADHETPDGIEQPMIAERSGSPMSAEAWDSLGQEGRTFMGSGPTAAEISAL 247 Query 279 NGTPAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGTGWINEAEAS 338 G A +PIR YAG S+D I A+ EL RTGG R +AV T+TG GW+NE AS Sbjct 248 TGREAKQPIRVYAGRESSDSINGVAQRVVDELERTGGFDRGTLAVVTTTGRGWVNEDVAS 307 Query 339 ALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLV 398 A EY+ GDTAI SMQYSFLPS L+F+ D+E AG ALF AV LP RP+LV Sbjct 308 AFEYVEGGDTAIASMQYSFLPSPLAFIADRETPMIAGRALFNAVYAKWIDLPVETRPELV 367 Query 399 VFGESLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDD 458 VFGESLGS+GG+A F +++ R DGAL+ G W +T +RD+GSP+ LP+ D Sbjct 368 VFGESLGSYGGQAAFAGAQDMMTRVDGALWVGTPNFTAQWQEITDSRDSGSPEILPVIDG 427 Query 459 GRNVRFVARARDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLP 518 G+ +RF DL+ + W R+VY QHASDPI WW+ LL +PDWL+E G DV P Sbjct 428 GQAIRFAGDPEDLEL-KSDWDDDRIVYWQHASDPITWWSFDLLLNKPDWLKEPLGRDVDP 486 Query 519 QTRWIPVVTFVQVSADMAVATHVPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLL 578 W+P+VTF QV+ DM + VP GHGH Y AD WA +L P WT T++L+ LL Sbjct 487 GMTWVPLVTFWQVTLDMVFSADVPSGHGHNYGEDAADMWAKILHPEAWTSADTDKLRSLL 546 Query 579 HANAKP 584 N +P Sbjct 547 TTNLEP 552 >gi|325672535|ref|ZP_08152231.1| membrane-spanning protein [Rhodococcus equi ATCC 33707] gi|325556412|gb|EGD26078.1| membrane-spanning protein [Rhodococcus equi ATCC 33707] Length=584 Score = 405 bits (1042), Expect = 9e-111, Method: Compositional matrix adjust. Identities = 252/578 (44%), Positives = 320/578 (56%), Gaps = 16/578 (2%) Query 11 NASDEPATGAEQAV----DTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVWFSMTPS 66 ASD A GA+ D TP R + R G A+ LV +S++PS Sbjct 6 RASDPGADGADGTAHAPDDGVGTPSVSRRAVRRMREYGRGLHPVGLAVALVLFTWSISPS 65 Query 67 LLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNS-SPPPPRWAWPPLIAVGAVGM 125 LLPR QG+ +GI A GYG G A W+VR + S R W L A + + Sbjct 66 LLPRAWYLQGVATGISVAAGYGFGCLAAWVVRSCGVQPAWSARTQRIGWWILAAATVIVV 125 Query 126 VGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRFLVGQV 185 V VWQ+ VRDL+G+E + L ++LVV F L+E G+ +R R L Sbjct 126 PVFLVLGGVWQNYVRDLVGIERTNQANVLLVFLIALVVWFVLLEAGRGVRAGTRELAALA 185 Query 186 DRIAP-----FRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPP 240 R+ P A VV+ ++++ L NG+V FA N +F+ + P P Sbjct 186 RRVIPRPAANVAGLAVAVVLAVLLVNGALYNGLV-AFA----NWSFSGADTATAPGVEQP 240 Query 241 KTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIM 300 P RSG P S +W++LG +GR FV GP A++ A G PA EPIR YAG SA+ + Sbjct 241 TVPERSGSPASAQAWDTLGQEGRTFVGRGPGAAEIAAVTGRPAKEPIRVYAGRESAESVP 300 Query 301 ATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPS 360 A A L EL RT R V+AV T+TG GW+N++ AS+LEY+ GDTAI SMQYSFLPS Sbjct 301 AVANLVVAELDRTKAWERKVLAVNTTTGRGWVNQSVASSLEYIEGGDTAIASMQYSFLPS 360 Query 361 WLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNIL 420 L+F+ D+E+ + AG ALF AV LP RPKLVVFGESLGS+GG+ F ++ Sbjct 361 PLAFIADRESPQIAGRALFNAVFARWIDLPVETRPKLVVFGESLGSYGGQNAFAGFQDMA 420 Query 421 ARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGR 480 AR DG L+ G W +TA RDAGSP+ LP+ D +VRF + DL PW Sbjct 421 ARVDGGLWVGTPNFTPQWQEVTAARDAGSPEILPVVGDAASVRFASDPEDLDL-GTPWKP 479 Query 481 PRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATH 540 R+VY QHASDPI WW+P LLF EPDWLRE RG DV P W+P VTF QV+ DM + Sbjct 480 RRIVYWQHASDPIVWWSPSLLFNEPDWLREPRGRDVDPNMTWMPFVTFWQVTLDMVFSAD 539 Query 541 VPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLL 578 VPDGHGH Y A WA +L P GWT T R+Q L Sbjct 540 VPDGHGHSYGPEAAGIWARILQPEGWTDADTARVQAAL 577 >gi|326384552|ref|ZP_08206231.1| integral membrane protein [Gordonia neofelifaecis NRRL B-59395] gi|326196686|gb|EGD53881.1| integral membrane protein [Gordonia neofelifaecis NRRL B-59395] Length=589 Score = 405 bits (1041), Expect = 1e-110, Method: Compositional matrix adjust. Identities = 230/536 (43%), Positives = 314/536 (59%), Gaps = 7/536 (1%) Query 51 GTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLV-RYMRSHNSSPPP 109 G +G VF +S+TPSLLPR FQGL+ GI GA GY +G + V R + + + PP Sbjct 44 GLVVGTVFYIWSLTPSLLPRHWAFQGLIGGIAGAIGYAVGAVSAVAVQRLVLTRAAWWPP 103 Query 110 P---RWAWPPLIAVGAVGMVGMAVQFHV-WQDDVRDLMGVEHLRWYDYPLAAALSLVVLF 165 P R A + V V + +A+ F V WQD + +LMG E + Y A LS+++ Sbjct 104 PVRVRRALRIGVPVICVAVSLVALYFAVDWQDQLAELMGTESPTYLGYLRAPVLSVLIAI 163 Query 166 TLVEIGQFIRWLFRFLVGQVDRI--APFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMN 223 +V + + +R + +L +++R+ P R + A+ +V+++V+ TL++GV ++ + +MN Sbjct 164 AVVGVFRILRDVGGWLARKLNRVFRIPRRAATALSLVVMLVVIYTLIDGVAVRGSYAAMN 223 Query 224 STFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPA 283 + F+A N+ + P P +SG S WE+LG +GR FV G A L +NG PA Sbjct 224 AIFSASNDTTRDGAEQPTLPEKSGSTASAARWETLGFEGRNFVSGGIRAAQLAEYNGKPA 283 Query 284 VEPIRTYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYM 343 EPIR YAGL SADG A L EL RTG R V+ V +TGTGW+N A E + Sbjct 284 KEPIRVYAGLESADGPDAQMRLVVDELERTGAFDRKVLVVIPTTGTGWVNPTAAQTFELV 343 Query 344 YNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGES 403 NGD+A+V+ QYS+LPSW+SFL D+E A AG L +AV P RPKL V+GES Sbjct 344 ANGDSALVAAQYSYLPSWVSFLADREKAAEAGRRLIDAVRARWSTKPPGHRPKLYVYGES 403 Query 404 LGSFGGEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVR 463 LG+ GE F +LN I + DG L+ GP +N +W +L RD GSP+ P Y +G VR Sbjct 404 LGTQAGEGAFDDLNAIRSTVDGVLWVGPPNSNPLWRALVDRRDPGSPEAEPTYANGLVVR 463 Query 464 FVARARDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWI 523 F A + R PW PRV+Y+QH +DP+ WW+P LL+R+P WL E D P RW Sbjct 464 FANDAEGIARNPDPWLSPRVLYVQHRTDPVVWWSPELLYRKPAWLSEPAAGDRTPAMRWY 523 Query 524 PVVTFVQVSADMAVATHVPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLH 579 P+VTF QVSAD+ A VPDGHGH Y + DGW AV P GWT TER++ L Sbjct 524 PIVTFWQVSADLGNAAGVPDGHGHNYGTVILDGWVAVTQPDGWTAADTERVRGALE 579 >gi|226364330|ref|YP_002782112.1| hypothetical protein ROP_49200 [Rhodococcus opacus B4] gi|226242819|dbj|BAH53167.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=589 Score = 405 bits (1041), Expect = 1e-110, Method: Compositional matrix adjust. Identities = 230/554 (42%), Positives = 315/554 (57%), Gaps = 9/554 (1%) Query 41 TWWIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVR-- 98 TW FTG A +F +S+TPSLLPR LFQGL+ GI A GY +G WLVR Sbjct 34 TWRFLRLDFTGIAFATLFFCWSLTPSLLPRDWLFQGLIGGINAAIGYAVGTAIGWLVRRY 93 Query 99 YMRSHNSSPPPPRWAWPPLIAV----GAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYP 154 +R + P P W+ + V +V +V +A WQ ++ LMG E Y Sbjct 94 LLRDRSWWPLPEPWSTGLRVLVTVTCASVSLVMLAYS-AAWQRELAALMGAEGTTTTGYI 152 Query 155 LAAALSLVVLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVV--LTITLLNG 212 LSL+V +++ + + +R L R++ G++ R + A V +L+V L L++G Sbjct 153 RTGGLSLLVGASVISVWRLLRELVRWIAGRLIRRWHLAIPTATTVGILIVTVLFFLLVDG 212 Query 213 VVLKFAMNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTI 272 V+++ + N+ F+ N+ P P +SG P SL W++LG++GR FV G Sbjct 213 VLMRGLYAATNAVFSLQNSTTRDGVEQPLDPEKSGSPESLAPWDTLGYEGRNFVSRGLDA 272 Query 273 ADLTAFNGTPAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGTGWI 332 +LTA NGTPA +PIR YAGL +A+ ++ EL RTG R V+ V +TGTGW+ Sbjct 273 DELTAANGTPAKDPIRVYAGLETAEDPDERMDVVIDELERTGAFTRKVLVVIPTTGTGWV 332 Query 333 NEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPES 392 N A A+E ++NGDTA+V+ QYSFLPSW+SFL D+E A AG+ L + V + Q PE+ Sbjct 333 NPTAAQAIELVHNGDTALVAGQYSFLPSWISFLADREKAAEAGKMLIDRVHERWLQEPEA 392 Query 393 QRPKLVVFGESLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQW 452 RPKL+V+GESLG+ GE F L++I DG L+ GP +N +W L RD G+P+ Sbjct 393 TRPKLLVYGESLGTQAGEGAFDTLSDIRQTVDGVLWVGPPNSNRLWGQLIQRRDPGTPEV 452 Query 453 LPIYDDGRNVRFVARARDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWLREQR 512 P Y G VRF + D+ W PR++Y+QH SDP+ WW+P L F PDWL+E Sbjct 453 DPEYAAGLVVRFADDSADMVEDTGEWLSPRILYVQHPSDPVVWWSPDLAFTRPDWLKEPP 512 Query 513 GYDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRYVATVADGWAAVLSPPGWTQQKTE 572 G D P +W P VTF QVSAD+ A VPDGHGH Y V DGW V P GWT TE Sbjct 513 GDDRSPSMKWFPFVTFWQVSADLTNAAGVPDGHGHNYGTLVLDGWITVAQPEGWTPADTE 572 Query 573 RLQPLLHANAKPFG 586 R++ L + A G Sbjct 573 RVRSTLESLAGTEG 586 >gi|229490794|ref|ZP_04384629.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229322184|gb|EEN87970.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=554 Score = 404 bits (1038), Expect = 2e-110, Method: Compositional matrix adjust. Identities = 233/552 (43%), Positives = 315/552 (58%), Gaps = 18/552 (3%) Query 44 IRHYTFT----GTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRY 99 +R Y T G + GLVF SM+PSLLPR QG+ +GI A GYG+GV W++R Sbjct 8 VRRYGKTLHSVGLSFGLVFFVLSMSPSLLPRAWYLQGVATGISVATGYGIGVIVAWMIRK 67 Query 100 MRSHNSSPPPPRWA-------WPPLIAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYD 152 PRW+ W L + + + + WQ VRDL+ + + Sbjct 68 CGVE------PRWSDRTKRIGWAVLAVLAVILVPLFLILGSWWQQIVRDLVEAPRVNRAN 121 Query 153 YPLAAALSLVVLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITLLNG 212 Y L +SLVV L+E+G+ +R L R L R P + +V++ L I ++NG Sbjct 122 YLLVLLISLVVWLILLEVGRGLRHLTRGLAAVALRFVPKEAAKVASLVVVFALAIFVVNG 181 Query 213 VVLKFAMNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTI 272 + + N +F+ +N+ P RSG P S +W+SLG +GR F+ SGP+ Sbjct 182 ALYNGLIAFANWSFSGADNDTPDGIDQPLIAERSGSPMSAEAWDSLGKEGRTFMGSGPSA 241 Query 273 ADLTAFNGTPAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGTGWI 332 ++A G A +PIR YAG S+D + A+ EL RTGG RAV+AV T+TG GW+ Sbjct 242 VQISALTGRDAKQPIRVYAGRESSDSVDGVAQRVVNELERTGGFDRAVLAVVTTTGRGWV 301 Query 333 NEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPES 392 N+ ASA EY+ GDTAI +MQYSFLPS L+F+ D+E AG ALF +V LP Sbjct 302 NDDVASAFEYVQGGDTAIAAMQYSFLPSPLAFIADRETPMAAGRALFNSVYAKWIDLPLD 361 Query 393 QRPKLVVFGESLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQW 452 +RPKLVVFGESLGS+GG+A F ++ R DGAL+SG W +T++RD+GS + Sbjct 362 KRPKLVVFGESLGSYGGQAAFAGAQDMATRVDGALWSGTPNFTAQWQEITSSRDSGSREA 421 Query 453 LPIYDDGRNVRFVARARDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWLREQR 512 +P+ DDG+++RF A DL+ DAPW RVVY QHASDPI WW+ LL +PDWL E Sbjct 422 VPVIDDGQSIRFAAYPEDLEL-DAPWNDSRVVYWQHASDPIVWWSFDLLLNKPDWLAEPL 480 Query 513 GYDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRYVATVADGWAAVLSPPGWTQQKTE 572 G DV P WIP VTF QV+ DM + VP GHGH Y A AD WA +L P W+Q T+ Sbjct 481 GRDVDPGMTWIPFVTFWQVTLDMVFSADVPPGHGHNYGAEAADMWARILHPDNWSQSDTD 540 Query 573 RLQPLLHANAKP 584 ++ L + +P Sbjct 541 AIRGALTNDFQP 552 >gi|258655064|ref|YP_003204220.1| hypothetical protein Namu_4958 [Nakamurella multipartita DSM 44233] gi|258558289|gb|ACV81231.1| conserved membrane-spanning protein [Nakamurella multipartita DSM 44233] Length=587 Score = 404 bits (1038), Expect = 2e-110, Method: Compositional matrix adjust. Identities = 235/540 (44%), Positives = 311/540 (58%), Gaps = 3/540 (0%) Query 43 WIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRS 102 W R YT G L+F S +PSL+PR L QG+V GI A GYGLGV + R Sbjct 46 WFR-YTLPGAWTALIFAGLSFSPSLVPRPGLLQGVVCGISAAIGYGLGVVGASVWRAFPD 104 Query 103 HNSSPPPPRWAWPPLIAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLV 162 + PP RW+WP AVGAV ++ + WQ +RD+M W+ L + + Sbjct 105 RPARPPR-RWSWPVFYAVGAVLLLVCWLLGQRWQRQLRDMMSAPAESWWSKLLLPVSAAL 163 Query 163 VLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSM 222 V LV IG+ +R +R+L G + R R + AI V + L++ L++G++ + + Sbjct 164 VFVLLVAIGRGLRGAYRWLWGLLSRWIGRRAARAIGWVAVTGLSVLLVSGLLQDVLLQGL 223 Query 223 NSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTP 282 +++F+ + + P T LRSGGP SLV+W++LG QGR + +GPT + AF G P Sbjct 224 DNSFSVADRGTADGAEQPTTALRSGGPDSLVAWDTLGLQGRNYTGTGPTQQQIAAFWGGP 283 Query 283 AVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEY 342 A+EPIR YAG+ SA + A+LA ++L R GG R + VA +TGTGWI+ A ALEY Sbjct 284 ALEPIRAYAGIQSAPNVEERAQLAVQDLERAGGFDREYLVVAGTTGTGWIDPASIDALEY 343 Query 343 MYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGE 402 GD A V +QYS+LPSWLSF+VD+ AR AG A+F+AV + LP RPKL+VFG Sbjct 344 EVRGDVASVGIQYSYLPSWLSFMVDQVRAREAGRAMFDAVYQRWIALPVDDRPKLLVFGV 403 Query 403 SLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNV 462 SLGSF GEA F ++ RTDG LF GP N + A RD GS P++ DGR V Sbjct 404 SLGSFSGEAAFSGEADLANRTDGVLFVGPPNFNALRQEFEAGRDPGSTAAEPVFRDGRTV 463 Query 463 RFVARARDLQRP-DAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTR 521 RF RP DAPW RV+Y+ H SDP+ WW+P LL PDWL E G D L Sbjct 464 RFTPDPSQPTRPTDAPWDGTRVLYVMHGSDPVVWWSPSLLLTRPDWLDEPAGTDQLEGMF 523 Query 522 WIPVVTFVQVSADMAVATHVPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHAN 581 W+P VTF QV+ DM VP GHGH Y D WA V+ P GWT +K E+L+ ++ A Sbjct 524 WVPFVTFWQVTVDMMELVDVPSGHGHDYTVNYLDAWAQVVQPAGWTPEKAEQLRAIILAE 583 >gi|312139581|ref|YP_004006917.1| integral membrane protein [Rhodococcus equi 103S] gi|311888920|emb|CBH48233.1| putative integral membrane protein [Rhodococcus equi 103S] Length=546 Score = 402 bits (1033), Expect = 8e-110, Method: Compositional matrix adjust. Identities = 240/534 (45%), Positives = 307/534 (58%), Gaps = 12/534 (2%) Query 51 GTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNS-SPPP 109 G A+ LV +S++PSLLPR QG+ +GI A GYG G A W+VR + S Sbjct 12 GLAVALVLFTWSISPSLLPRAWYLQGVATGISVAAGYGFGCLAAWVVRSCGVQPAWSART 71 Query 110 PRWAWPPLIAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVE 169 R W L A + + V VWQ+ VRDL+G+E + L ++LVV F L+E Sbjct 72 QRIGWWILAAATVILVPVFLVLGGVWQNYVRDLVGIERTNQANVLLVFLIALVVWFVLLE 131 Query 170 IGQFIRWLFRFLVGQVDRIAP-----FRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNS 224 G+ +R R L R+ P A VV+ ++++ L NG+V FA N Sbjct 132 AGRGVRAGTRELAALARRVIPRPAANVAGLAVAVVLAVLLVNGALYNGLV-AFA----NW 186 Query 225 TFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAV 284 +F+ + P P P RSG P S +W++LG +GR FV GP A++ A G PA Sbjct 187 SFSGADTATAPGVEQPTVPERSGSPASAQAWDTLGQEGRTFVGRGPGAAEIAAVTGRPAK 246 Query 285 EPIRTYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMY 344 EPIR YAG SA+ + A A L EL RT R V+AV T+TG GW+N++ AS+LEY+ Sbjct 247 EPIRVYAGRESAESVPAVANLVVAELDRTKAWERKVLAVNTTTGRGWVNQSVASSLEYIE 306 Query 345 NGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESL 404 GDTAI SMQYSFLPS L+F+ D+E+ + AG ALF AV LP RPKLVVFGESL Sbjct 307 GGDTAIASMQYSFLPSPLAFIADRESPQIAGRALFNAVFARWIDLPVETRPKLVVFGESL 366 Query 405 GSFGGEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRF 464 GS+GG+ F ++ AR DG L+ G W +TA RD GSP+ +P+ DG +VRF Sbjct 367 GSYGGQNAFAGFQDMAARVDGGLWVGTPNFTPQWQEVTAARDPGSPEIMPVVGDGASVRF 426 Query 465 VARARDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIP 524 + DL PW R+VY QHASDPI WW+P LLF EPDWLRE RG DV P W+P Sbjct 427 ASDPEDLDL-GTPWKPRRIVYWQHASDPIVWWSPSLLFNEPDWLREPRGRDVDPNMTWMP 485 Query 525 VVTFVQVSADMAVATHVPDGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLL 578 VTF QV+ DM + VPDGHGH Y A WA +L P GWT T R+Q L Sbjct 486 FVTFWQVTLDMVFSADVPDGHGHSYGPEAAGIWARILQPEGWTDADTARVQAAL 539 >gi|312138300|ref|YP_004005636.1| integral membrane protein [Rhodococcus equi 103S] gi|325674783|ref|ZP_08154470.1| hypothetical protein HMPREF0724_12252 [Rhodococcus equi ATCC 33707] gi|311887639|emb|CBH46951.1| putative integral membrane protein [Rhodococcus equi 103S] gi|325554369|gb|EGD24044.1| hypothetical protein HMPREF0724_12252 [Rhodococcus equi ATCC 33707] Length=593 Score = 402 bits (1032), Expect = 1e-109, Method: Compositional matrix adjust. Identities = 229/556 (42%), Positives = 310/556 (56%), Gaps = 27/556 (4%) Query 42 WWIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLV---- 97 W + FTG A +F +S+TPSLLPR L+QGL+ GI AFGY +G WLV Sbjct 39 WGLLKLDFTGIAFASLFFCWSLTPSLLPRDWLYQGLIGGINAAFGYAVGTAIGWLVYEFG 98 Query 98 -----------RYMRSHNSSPPPPRWAWPPLIAVGAVGMVGMAVQFHVWQDDVRDLMGVE 146 RYMR+ P V A+ + M + WQ ++ LM E Sbjct 99 LARRPWWPLPDRYMRAIKVLVP----------VVSALAAITMLIYSAGWQRELSALMNAE 148 Query 147 HLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRFLVGQVDR--IAPFRVSAAIVVVLLVV 204 Y LSL+V L+ + + +R L R++ Q+++ P ++A +++V Sbjct 149 GTTTTGYIRTGGLSLLVAAALISLWRVLRDLVRWVARQLNKWLKIPRPAASAAGFAVVLV 208 Query 205 LTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRI 264 L L++G++L+ +NS F+ NNE P + P P +SG P S W++LG +GR Sbjct 209 LVFMLVDGILLRVGYGVVNSIFSLQNNETRPGAVQPILPEKSGSPASAAPWDTLGFEGRN 268 Query 265 FVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAVVAVA 324 FV G LTA NG PA EPIR YAGL +AD A ++ EL RT R + + Sbjct 269 FVSGGIHADALTAANGAPAKEPIRVYAGLETADDTAARMDVVLDELERTKAFERKTLVII 328 Query 325 TSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDK 384 +TGTGW+N A A+E + NGD+A+V+ QYS++PSW+SF+ D+ A AG AL AV Sbjct 329 PTTGTGWVNPTAAQAIELVENGDSALVAAQYSYMPSWISFVADRGRAAVAGNALIRAVHD 388 Query 385 LIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTAN 444 PE+ RPKL V+GESLG+ GE F L +I DG L+ GP N +W++LT Sbjct 389 RWLTKPEATRPKLYVYGESLGTQAGEGAFDGLADIRETVDGVLWVGPPNANPLWSALTER 448 Query 445 RDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFRE 504 RD G+P+ P+Y DG VRF A + PW PRV+Y+QH SDP+ WW+P L F Sbjct 449 RDPGTPEVQPVYADGLVVRFADDADAIPGSPGPWLEPRVLYIQHPSDPVVWWSPDLAFSR 508 Query 505 PDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRYVATVADGWAAVLSPP 564 PDWL E G+D LP +W P VTF QVSAD+A A VPDGHGH Y + DGW AV SP Sbjct 509 PDWLSEPPGFDRLPSMKWFPFVTFWQVSADLANAAGVPDGHGHNYGTVILDGWVAVTSPD 568 Query 565 GWTQQKTERLQPLLHA 580 GWT TER++ +L + Sbjct 569 GWTPADTERVRGVLES 584 >gi|111021807|ref|YP_704779.1| hypothetical protein RHA1_ro04836 [Rhodococcus jostii RHA1] gi|110821337|gb|ABG96621.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=589 Score = 401 bits (1031), Expect = 2e-109, Method: Compositional matrix adjust. Identities = 225/547 (42%), Positives = 311/547 (57%), Gaps = 9/547 (1%) Query 42 WWIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWLVR--Y 99 W + FTG +F +S+TPSLLPR LFQGL+ GI A GY +G WLVR + Sbjct 35 WRLLRLDFTGIGFATLFFCWSLTPSLLPRDWLFQGLIGGINAAIGYTVGTVVGWLVRRYF 94 Query 100 MRSHNSSPPPPRWA----WPPLIAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLRWYDYPL 155 +R + P P W+ + V +V +A WQ ++ LMG E Y Sbjct 95 LRHRSWWPLPEPWSTGLRVVVTVTCVVVSLVMLAYS-AAWQREIAALMGAEGTTTTGYIR 153 Query 156 AAALSLVVLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVV--LTITLLNGV 213 LSL+V ++ + + +R L R++ ++ R + A V +L+V L L++GV Sbjct 154 TGGLSLLVGAAIISVWRLLRELVRWIAARLIRRWHLAIPTATTVGILIVTVLFFLLVDGV 213 Query 214 VLKFAMNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIA 273 +++ + N+ F+ N+ + P P +SG P SL W++LG++GR FV G Sbjct 214 LMRGVYAATNAAFSLQNSTTRDGTEQPLDPEKSGSPESLAPWDTLGYEGRNFVSRGLDAD 273 Query 274 DLTAFNGTPAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGTGWIN 333 +LTA NGTPA +PIR YAGL +A+ A ++ EL RTG R V+ V +TGTGW+N Sbjct 274 ELTAANGTPAKDPIRVYAGLETAEDPDARMDIVIDELERTGAFSRKVLVVIPTTGTGWVN 333 Query 334 EAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQLPESQ 393 A A+E ++NGDTA+V+ QYSFLPSW+SFL D+E A AG+ L + V + Q PE+ Sbjct 334 PTAAQAIELVHNGDTALVASQYSFLPSWISFLADREKAAEAGKKLIDRVHERWLQEPEAT 393 Query 394 RPKLVVFGESLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTVWNSLTANRDAGSPQWL 453 RPKL+V+GESLG+ GE F L++I DG L+ GP +N +W L RD G+P+ Sbjct 394 RPKLLVYGESLGTQAGEGAFGTLSDIRQTVDGVLWVGPPNSNRLWGQLIQRRDPGTPEVD 453 Query 454 PIYDDGRNVRFVARARDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWLREQRG 513 P Y G VRF + D+ W PR++Y+QH SDP+ WW+P L F PDWL+E G Sbjct 454 PEYAAGLVVRFADDSADMVEETGEWLSPRILYVQHPSDPVVWWSPDLAFTRPDWLKEPPG 513 Query 514 YDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRYVATVADGWAAVLSPPGWTQQKTER 573 D P +W P VTF QVSAD+ A VPDGHGH Y V DGW V P GWT TER Sbjct 514 EDRSPSMKWFPFVTFWQVSADLTNAAGVPDGHGHNYGTLVLDGWITVAQPEGWTPVDTER 573 Query 574 LQPLLHA 580 ++ L + Sbjct 574 VRSTLES 580 >gi|169627809|ref|YP_001701458.1| hypothetical protein MAB_0708 [Mycobacterium abscessus ATCC 19977] gi|169239776|emb|CAM60804.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=600 Score = 398 bits (1022), Expect = 2e-108, Method: Compositional matrix adjust. Identities = 227/552 (42%), Positives = 306/552 (56%), Gaps = 22/552 (3%) Query 42 WWIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGV-FAVWLVRYM 100 W + F G A G +F S+TPSL+PR LFQGL+ G A GYG+GV + ++R+ Sbjct 45 WNLLRLDFCGIAFGALFFCLSLTPSLMPRTWLFQGLIGGATAAIGYGIGVALSKLVLRFW 104 Query 101 RSHNSSPPPPRWAWP-----------PLIAVGAVGMVGMAVQFHVWQDDVRDLMGVEHLR 149 H +W WP ++ +GAV + M V WQ + LM + Sbjct 105 LRHQ------KW-WPLRDRVMITVKLGVVVLGAVCSLAMIVPAARWQRQIAALMDAQGPT 157 Query 150 WYDYPLAAALSLVVLFTLVEIGQFIRWLFRFLVGQVDRIAPF--RVSAAIVVVLLVVLTI 207 +Y A +S+ V + + + +R L R L + R VS I ++ VL I Sbjct 158 TLEYSKAFLVSIAVGALFISVARILRDLVRLLARFLIRRLRLSQEVSLLIGTAIVAVLAI 217 Query 208 TLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVH 267 L NGV+++ + N++F N+ P P RSG P SL SW+SLG++GR FV Sbjct 218 MLFNGVLVRGFFAAANASFGPHNDTTRAGVQQPLQPERSGSPASLSSWDSLGYEGRNFVS 277 Query 268 SGPTIADLTAFNGTPAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAVVAVATST 327 G L NG PA EPIR YAGL +AD A++ REL RT R V+ + +T Sbjct 278 GGLHADVLAKVNGRPAKEPIRVYAGLETADTAEERADILVRELERTKAFDRKVLVIVPTT 337 Query 328 GTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIR 387 GTGW+ A A +E MYNGDTAIV+ QYSFLPSW+SFL DK+ A +G+ L + V K Sbjct 338 GTGWVTPAAARGIELMYNGDTAIVATQYSFLPSWISFLADKKKALASGQLLVDTVQKRWA 397 Query 388 QLPESQRPKLVVFGESLGSFGGEAPFMNLNNILAR-TDGALFSGPTFNNTVWNSLTANRD 446 Q PE RPKL+++GESLGSF G+ F L +I A G L++GP + +WN L + RD Sbjct 398 QQPEGHRPKLLIYGESLGSFAGQGAFGGLGDIRAAGVAGVLWTGPPNFSHIWNELVSKRD 457 Query 447 AGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREPD 506 G+ + LP+YD G RF PW P+V+++QH SDP+ WW+ LLF EPD Sbjct 458 RGTLEALPVYDSGFTARFAIGPDIDALAKPPWQNPKVLFVQHPSDPVTWWSTDLLFSEPD 517 Query 507 WLREQRGYDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRYVATVADGWAAVLSPPGW 566 WL+E D RW P+VTF QV+AD+A A VPDGHGH Y + +GWAA+ P GW Sbjct 518 WLKEAPVGDRSAAMRWYPIVTFWQVAADLANAVGVPDGHGHNYGISSVNGWAAIAPPAGW 577 Query 567 TQQKTERLQPLL 578 T Q TER++ L Sbjct 578 TPQDTERIRKAL 589 >gi|108801508|ref|YP_641705.1| hypothetical protein Mmcs_4545 [Mycobacterium sp. MCS] gi|119870661|ref|YP_940613.1| hypothetical protein Mkms_4632 [Mycobacterium sp. KMS] gi|126437493|ref|YP_001073184.1| hypothetical protein Mjls_4928 [Mycobacterium sp. JLS] gi|108771927|gb|ABG10649.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696750|gb|ABL93823.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126237293|gb|ABO00694.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=585 Score = 391 bits (1005), Expect = 1e-106, Method: Compositional matrix adjust. Identities = 249/582 (43%), Positives = 328/582 (57%), Gaps = 40/582 (6%) Query 29 TPQTPEPQPIR-STWWIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGY 87 TP+ P P+ W + +TG A G +F S+TPSLLPR LFQGL+ G A GY Sbjct 16 TPERPRRHPLLIRVWGLIRLDYTGIAFGALFFCLSLTPSLLPRDWLFQGLIGGANAAIGY 75 Query 88 GLGVF-AVWLVRYMRSHNSSPPPPRWAWPP----LIAVGAVGMVGMAVQFHV-------- 134 G+GVF + LVR++ R AW P L AV G+VG+A+ V Sbjct 76 GIGVFISKMLVRFVIGG-------RRAWLPSRRTLYAV-KTGVVGLAIAASVLMLVPAAA 127 Query 135 WQDDVRDLMGV---EHLRWYDYPLAAALS--LVVLFTLVEIGQFIRWLFRFLVGQ---VD 186 WQ V MG+ E ++ + AAL+ + V + V +G I+ L R+L+ + D Sbjct 128 WQRQVSAEMGMPGPETSGYFRVLVVAALAGGVCVAVSRVVLG-IIKTLARWLIRRWRLSD 186 Query 187 RIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPPKTPLRS 246 +A +AAIVV+L ITL+NGV+L+ + + F N + P P RS Sbjct 187 EMALLIGTAAIVVLL-----ITLINGVLLQGFLAGASRVFQPQNFTTREGVSQPTQPERS 241 Query 247 GGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIMATAELA 306 G P S SW+SLG+QGR FV SGP +L NG PA EPIR YAGL +AD + Sbjct 242 GSPASFASWDSLGYQGRNFVGSGPDARELERVNGRPAQEPIRVYAGLQTADTDEQRIAVL 301 Query 307 ARELARTGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLV 366 EL RT R ++ + +TGTGW+N A A+E MYNGDTA+V+MQYS+LPSW+SFL Sbjct 302 LSELERTRAFDRELLVIVPTTGTGWVNPVAARAIELMYNGDTAMVAMQYSYLPSWISFLG 361 Query 367 DKENARHAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNILART-DG 425 D++ + +G L +AV + Q P QRPKLV++GESLGS G+A F L +I Sbjct 362 DQQRSMESGRMLIDAVQQRWSQRPAQQRPKLVLYGESLGSMAGQAAFAWLPDIADMGFSS 421 Query 426 ALFSGPTFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRF--VARARDLQRPDA-PWGRPR 482 L+ GP + +W ++T RD G+P+ P YD GR VRF ++ R A PW R Sbjct 422 VLWVGPPNASPLWKAITDRRDPGTPEVEPRYDGGRTVRFSPATDPAEIARDTAPPWEGTR 481 Query 483 VVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATHVP 542 V++LQHASDPI W++P LL PDWLRE G D RW P+VTF QV ADM A+ VP Sbjct 482 VLFLQHASDPIVWYSPDLLTARPDWLREPPGRDRTSSMRWYPIVTFWQVGADMTNASSVP 541 Query 543 DGHGHRYVATVADGWAAVLSPPGWTQQKTERLQPLLHANAKP 584 GHGH Y +V DGWAAV PP WT TER++ L + P Sbjct 542 AGHGHNYGESVLDGWAAVAPPPDWTAADTERIRASLRESGGP 583 >gi|258655333|ref|YP_003204489.1| membrane protein [Nakamurella multipartita DSM 44233] gi|258558558|gb|ACV81500.1| membrane protein [Nakamurella multipartita DSM 44233] Length=585 Score = 388 bits (997), Expect = 1e-105, Method: Compositional matrix adjust. Identities = 231/567 (41%), Positives = 309/567 (55%), Gaps = 10/567 (1%) Query 13 SDEPATGAEQAVDTAATPQTPEPQPIRSTWWIRHYTFTGTAMGLVFVWFSMTPSLLPRGP 72 S+EPA + A A + P+ YT G+ LVFV + TPSL+PR Sbjct 23 SNEPAEQSAPASSGAVADRGRRPR--------FRYTLPGSWTALVFVCLAFTPSLVPRPG 74 Query 73 LFQGLVSGICGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAVGAVGMVGMAVQF 132 FQG+V G+ GA GYGLGV W+ R + RW+W V V +V + Sbjct 75 AFQGVVGGLTGAIGYGLGVAGAWVWRQFADRPARAAR-RWSWSAFGIVAGVALVTSYLLG 133 Query 133 HVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRFLVGQVDRIAPFR 192 WQD +R L+ E + ++++V LV G+ I ++R+ ++ R R Sbjct 134 QRWQDQIRALVNAEPQDLGSRLILPVVAVLVFVGLVAAGRGIAKVYRWAARRLSRWMGDR 193 Query 193 VSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSL 252 + + +L LT+ L++GV++ + + FA + + + P T LRSGGPGSL Sbjct 194 AARVVGWLLAAGLTVGLVSGVLVDGVLAITDRMFAVRDTTTSDTAVQPTTGLRSGGPGSL 253 Query 253 VSWESLGHQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIMATAELAARELAR 312 + W++LG+QGR F SGPT + AF G PA PIR YAGL SA + A LA +L R Sbjct 254 IGWDTLGYQGRNFTGSGPTPGQIQAFIGAPAPVPIRAYAGLASAQDVRDRARLAVADLQR 313 Query 313 TGGLRRAVVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENAR 372 GG R + V +TGTGW++ A A EY GD+A V++QYS+LPSW SFLVD++ AR Sbjct 314 AGGFDRGHLLVTGTTGTGWVDPAAIGAFEYETGGDSAAVAIQYSYLPSWASFLVDQDKAR 373 Query 373 HAGEALFEAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNILARTDGALFSGPT 432 AG ALF+ V ++ LP RPKL FG SLGSF E+PF ++ RTDG L +G Sbjct 374 QAGRALFDEVYRVWSSLPPDHRPKLYGFGLSLGSFMMESPFGGDADMANRTDGILLAGSP 433 Query 433 FNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVAR-ARDLQRPDAPWGRPRVVYLQHASD 491 N + T RDA SP+ P+Y G VRF A + DA W RV+YLQHASD Sbjct 434 AFNPLNREFTDQRDALSPEVQPVYRGGETVRFSNDPAASIPPDDASWDGARVLYLQHASD 493 Query 492 PIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRYVA 551 PI W +P L+ PDWL E G DV + WIP VTF QV+ DM P GHGH Y Sbjct 494 PIVWLSPDLILHRPDWLVEPAGPDVTDEMIWIPFVTFWQVTLDMLEPVDTPPGHGHTYTL 553 Query 552 TVADGWAAVLSPPGWTQQKTERLQPLL 578 +GWA+VL PP W+ K+E L+ LL Sbjct 554 EFVEGWASVLEPPNWSPAKSEELRALL 580 >gi|269793727|ref|YP_003313182.1| hypothetical protein Sked_03810 [Sanguibacter keddieii DSM 10542] gi|269095912|gb|ACZ20348.1| predicted membrane protein [Sanguibacter keddieii DSM 10542] Length=643 Score = 387 bits (993), Expect = 4e-105, Method: Compositional matrix adjust. Identities = 241/556 (44%), Positives = 325/556 (59%), Gaps = 23/556 (4%) Query 30 PQTPEPQPIRSTWWIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGL 89 P+ P P P WW H G G++F +SM+ SLLPR Q L +GIC A GYG+ Sbjct 90 PRLP-PVPKTPHWWSLHGV--GAWFGVLFYSWSMSASLLPRPWYLQALATGICVALGYGV 146 Query 90 GV-FAVWLVRYMRSHNSSPPPPRWAWPPLIAVGAVGMVGMAVQF--HVWQDDVRDLMGV- 145 GV A L R S + RWAW L+AV V +V +A H Q ++L+G+ Sbjct 147 GVTLATLLRRLGFSPDWKASRRRWAWI-LLAVVTVVIVPLAFFLGGHA-QTVTQELVGLP 204 Query 146 EHLRWYD---YPLAA--ALSLVVLF-TLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVV 199 RW+ P+A A++L+ LF L+++G+ + RF R P + Sbjct 205 SESRWFHALAIPVAGLVAVALIGLFRALIQLGKIVA---RF----GSRFVPALPAKVFGT 257 Query 200 VLLVVLTITLLNGVVLKFAMNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLG 259 V VVL + L+ VL + AA + P P R+G P SLV W+ LG Sbjct 258 VTAVVLAVVLVQDGVLPAVLAVGGRAAAATDRADVPGVEQPADRERTGSPESLVDWDGLG 317 Query 260 HQGRIFVHSGPTIADLTAFNGTPAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRA 319 G++FV GPT+ DL AF+G PA+ P+R YAGL ++D + A + EL R GG R Sbjct 318 RNGKVFVAGGPTVEDLEAFSGEPAMTPVRAYAGLETSDDLREVAAMVVAELEREGGFGRE 377 Query 320 VVAVATSTGTGWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALF 379 V+AVAT+TG+GW+NEA +++LEY++NGDTAI +MQYS+LPS L+FL D+ + AG ALF Sbjct 378 VLAVATTTGSGWVNEAPSTSLEYLHNGDTAIAAMQYSYLPSPLAFLADRGTPQEAGRALF 437 Query 380 EAVDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNILARTDGALFSGPTFNNTVWN 439 EAV + QLPE RP LVVFGESLGS+GG+A F ++++ AR DGAL+ G W Sbjct 438 EAVYAVWEQLPEGDRPSLVVFGESLGSYGGQAAFSGVDDMAARVDGALWIGTPNFTEPWG 497 Query 440 SLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGRPRVVYLQHASDPIAWWTPR 499 +T RDAGSP+ LP+ D G +VRFV L PW PR+VYLQHA+DP+ WW+P Sbjct 498 RITEGRDAGSPERLPVVDGGEHVRFVDTPEALTAL-GPWEAPRIVYLQHATDPVVWWSPD 556 Query 500 LLFREPDWLREQRGYDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRYVATVADGWAA 559 L+ ++PDWLRE V P +W P VTF QV+ DMA + +PDG+GH Y D WAA Sbjct 557 LILQQPDWLREDLAPSVNPDMQWYPFVTFWQVTVDMAFSIDMPDGYGHNYELGTVDSWAA 616 Query 560 VLSPPGWTQQKTERLQ 575 ++ P GWT+ T L+ Sbjct 617 IVPPEGWTESDTTALR 632 >gi|339492119|ref|YP_004712412.1| hypothetical protein PSTAB_0042 [Pseudomonas stutzeri ATCC 17588 = LMG 11199] gi|338799491|gb|AEJ03323.1| hypothetical protein PSTAB_0042 [Pseudomonas stutzeri ATCC 17588 = LMG 11199] Length=567 Score = 383 bits (983), Expect = 6e-104, Method: Compositional matrix adjust. Identities = 225/557 (41%), Positives = 327/557 (59%), Gaps = 20/557 (3%) Query 37 PIRSTWWIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWL 96 P+ W R + G +G +F ++TPSLLPR L QG+++G A GYGLGVF WL Sbjct 5 PVLYIW--RSLSGFGLLLGTLFFCAALTPSLLPRSTLSQGVLAGAALAVGYGLGVFWRWL 62 Query 97 VRYMRSHNSSPPPPRWAWPP---LIAVGAVGMVGMAV-QFHVWQDDVRDLMG---VEHLR 149 RY+ P P W LIAVG + + G + Q WQ+ VR LMG V Sbjct 63 WRYL----ELPERPGWQRERVNLLIAVGCLLLAGYFLSQVAGWQNAVRALMGMPPVSSAH 118 Query 150 WYDYPLAAALSLVVLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITL 209 + L A + ++L TL + + + RF+ DR+ P R++ I V++ + L +L Sbjct 119 LLEVILTALATFLILLTLARLYRLVS---RFVSRHADRVVPRRLANVIGVLVALALFWSL 175 Query 210 LNGVVLKFAMNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSG 269 L+ V+ A+ ++++FA + + P++APP +PL+SG SL+ WE LG GR F+ SG Sbjct 176 LSDVLAARALRMLDASFAQYDALIEPETAPPASPLKSGSRASLLRWEELGRTGREFIGSG 235 Query 270 PTIADLTAFNGTPAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGT 329 P+ AD++A +G A+EPIR Y GL +A+ A LA REL R+G R+V+ + T TGT Sbjct 236 PSAADISALSGRSALEPIRVYVGLRAAETPRQRARLALRELQRSGAFERSVLVLVTPTGT 295 Query 330 GWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQL 389 GWI+ A +A+EY+++GD A V++QYS+L S L+ LV+ + R ALF + +L Sbjct 296 GWIDPAAMNAVEYLHHGDIASVALQYSYLNSPLALLVEADYGRDVARALFAEIYGYWTEL 355 Query 390 PESQRPKLVVFGESLGSFGGEAPFMNLNNILAR-TDGALFSGPTFNNTVWNSLTANRDAG 448 P +RP+L + G SLG+ + + L+ +L GAL+SGP F + +W +LT +RD Sbjct 356 PAERRPRLYLHGLSLGALHSQRSW-ELHELLGDPIHGALWSGPPFRSDLWRTLTDSRDPD 414 Query 449 SPQWLPIYDDGRNVRFVARARDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWL 508 SP+W P + +GR VRF+ + + DAPWG R++YLQ+ASDPI ++ R +R PDWL Sbjct 415 SPEWRPRFREGRFVRFMNQQGTAEPADAPWGPMRLLYLQYASDPITFFDHRYAWRRPDWL 474 Query 509 REQRGYDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRYV-ATVADGWAAVLSPPGWT 567 E RG DV P RW P+VT +Q++ DMAV T P G+GH Y A D W V SPPGW Sbjct 475 AEPRGPDVSPSLRWFPLVTMLQLAVDMAVTTPTPPGYGHVYAPADYVDAWRLVSSPPGWN 534 Query 568 QQKTERLQ-PLLHANAK 583 +RL+ L H A+ Sbjct 535 ADALQRLKLQLTHEQAR 551 >gi|146280430|ref|YP_001170583.1| hypothetical protein PST_0033 [Pseudomonas stutzeri A1501] gi|145568635|gb|ABP77741.1| predicted membrane protein [Pseudomonas stutzeri A1501] Length=567 Score = 382 bits (981), Expect = 1e-103, Method: Compositional matrix adjust. Identities = 223/548 (41%), Positives = 323/548 (59%), Gaps = 19/548 (3%) Query 37 PIRSTWWIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWL 96 P+ W R + G +G +F ++TPSLLPR L QG+++G A GYGLGVF WL Sbjct 5 PVLYIW--RSLSGFGLLLGTLFFCAALTPSLLPRSTLSQGVLAGAALAVGYGLGVFWRWL 62 Query 97 VRYMRSHNSSPPPPRWAWPP---LIAVGAVGMVGMAV-QFHVWQDDVRDLMG---VEHLR 149 RY+ P P W LIAVG + + G + Q WQ+ VR LMG V Sbjct 63 WRYL----ELPERPGWQRERVNLLIAVGCLLLAGYFLSQVAGWQNAVRALMGMPPVSSAH 118 Query 150 WYDYPLAAALSLVVLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITL 209 + L A + ++L TL + + + RF+ DR+ P R++ I V++ + L +L Sbjct 119 LLEVILTALATFLILLTLARLYRLVS---RFVSRHADRVLPRRLANVIGVLVALALFWSL 175 Query 210 LNGVVLKFAMNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSG 269 L+ V+ A+ ++++FA + + P++APP +PL+SG SL+ WE LG GR F+ SG Sbjct 176 LSDVLAARALRMLDASFAQYDALIEPETAPPVSPLKSGSRASLLRWEELGRTGREFIGSG 235 Query 270 PTIADLTAFNGTPAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGT 329 P+ AD++A +G A+EPIR Y GL +A+ A LA REL R+G R+V+ + T TGT Sbjct 236 PSAADISALSGRSALEPIRVYVGLRAAETPRQRARLALRELQRSGAFERSVLVLVTPTGT 295 Query 330 GWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQL 389 GWI+ A +A+EY+++GD A V++QYS+L S L+ LV+ + R ALF + +L Sbjct 296 GWIDPAAMNAVEYLHHGDIASVALQYSYLNSPLALLVEADYGRDVARALFAEIYGYWTEL 355 Query 390 PESQRPKLVVFGESLGSFGGEAPFMNLNNILAR-TDGALFSGPTFNNTVWNSLTANRDAG 448 P +RP+L + G SLG+ + + L+ +L GAL+SGP F + +W +LT +RD Sbjct 356 PAERRPRLYLHGLSLGALHSQRSW-ELHELLGDPIHGALWSGPPFRSDLWRTLTDSRDPD 414 Query 449 SPQWLPIYDDGRNVRFVARARDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWL 508 SP+W P + DGR VRF+ + + DAPWG R++YLQ+ASDPI ++ R +R PDWL Sbjct 415 SPEWRPRFRDGRFVRFMNQQGTAEPADAPWGPMRLLYLQYASDPIIFFDHRYAWRRPDWL 474 Query 509 REQRGYDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRYV-ATVADGWAAVLSPPGWT 567 E RG DV P RW P+VT +Q++ DMAV T P G+GH Y A D W V SPPGW Sbjct 475 AEPRGPDVSPSLRWFPLVTMLQLAVDMAVTTPTPPGYGHVYAPADYVDAWRLVSSPPGWN 534 Query 568 QQKTERLQ 575 +RL+ Sbjct 535 ADALQRLK 542 >gi|327478647|gb|AEA81957.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length=567 Score = 381 bits (978), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 225/557 (41%), Positives = 326/557 (59%), Gaps = 20/557 (3%) Query 37 PIRSTWWIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGICGAFGYGLGVFAVWL 96 P+ W R + G +G +F ++TPSLLPR L QG+++G A GYGLGVF WL Sbjct 5 PVLYIW--RSLSGFGLLLGTLFFCAALTPSLLPRSTLSQGVLAGAALAVGYGLGVFWRWL 62 Query 97 VRYMRSHNSSPPPPRWAWPP---LIAVGAVGMVGMAV-QFHVWQDDVRDLMG---VEHLR 149 RY+ P P W LIAVG + + G + Q WQ+ VR LMG V Sbjct 63 WRYL----ELPERPGWQRERVNLLIAVGCLLLAGYFLSQVAGWQNAVRALMGMPPVSSAH 118 Query 150 WYDYPLAAALSLVVLFTLVEIGQFIRWLFRFLVGQVDRIAPFRVSAAIVVVLLVVLTITL 209 + L A + ++L TL + + + RF+ DR+ P R++ I V++ + L +L Sbjct 119 LLEVILTALATFLILLTLARLYRLVS---RFVSRHADRVLPRRLANVIGVLVALALFWSL 175 Query 210 LNGVVLKFAMNSMNSTFAAVNNEMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSG 269 L+ V+ A+ ++++FA + + P++APP +PL+SG SL+ WE LG GR F+ SG Sbjct 176 LSDVLAARALRMLDASFAQYDALIEPETAPPASPLKSGSRASLLRWEELGRTGREFIGSG 235 Query 270 PTIADLTAFNGTPAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGT 329 P+ AD++A +G A+EPIR Y GL +A+ A LA REL R+G R+V+ + T TGT Sbjct 236 PSAADISALSGRSALEPIRVYVGLRAAETPRQRARLALRELQRSGAFERSVLVLVTPTGT 295 Query 330 GWINEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEAVDKLIRQL 389 GWI+ A +A+EY+++GD A V++QYS+L S L+ LV+ + R ALF + +L Sbjct 296 GWIDPAAMNAVEYLHHGDIASVALQYSYLNSPLALLVEADYGRDVARALFAEIYGYWTEL 355 Query 390 PESQRPKLVVFGESLGSFGGEAPFMNLNNILAR-TDGALFSGPTFNNTVWNSLTANRDAG 448 P +RP+L + G SLG+ + + L+ +L GAL+SGP F + +W +LT +RD Sbjct 356 PAERRPRLYLHGLSLGALHSQRSW-ELHELLGDPIHGALWSGPPFRSDLWRTLTDSRDPD 414 Query 449 SPQWLPIYDDGRNVRFVARARDLQRPDAPWGRPRVVYLQHASDPIAWWTPRLLFREPDWL 508 SP+W P + DGR VRF+ + + APWG R++YLQ+ASDPI ++ R +R PDWL Sbjct 415 SPEWRPRFRDGRFVRFMNQQGTAEPAGAPWGPMRLLYLQYASDPITFFDHRYAWRRPDWL 474 Query 509 REQRGYDVLPQTRWIPVVTFVQVSADMAVATHVPDGHGHRYV-ATVADGWAAVLSPPGWT 567 E RG DV P RW P+VT +Q++ DMAV T P G+GH Y A D W V SPPGW Sbjct 475 AEPRGPDVSPSLRWFPLVTMLQLAVDMAVTTPTPPGYGHVYAPADYIDAWRLVSSPPGWN 534 Query 568 QQKTERLQ-PLLHANAK 583 +RL+ L H A+ Sbjct 535 ADALQRLKLQLTHEQAR 551 Lambda K H 0.321 0.135 0.432 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1331117598876 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40