BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1072 Length=278 Score E Sequences producing significant alignments: (Bits) Value gi|15608212|ref|NP_215588.1| transmembrane protein [Mycobacteriu... 542 3e-152 gi|121637001|ref|YP_977224.1| putative transmembrane protein [My... 540 8e-152 gi|240170295|ref|ZP_04748954.1| transmembrane protein [Mycobacte... 483 1e-134 gi|183984365|ref|YP_001852656.1| hypothetical protein MMAR_4394 ... 425 3e-117 gi|296169937|ref|ZP_06851546.1| transmembrane protein [Mycobacte... 423 1e-116 gi|118616097|ref|YP_904429.1| hypothetical protein MUL_0208 [Myc... 423 2e-116 gi|41407117|ref|NP_959953.1| hypothetical protein MAP1019 [Mycob... 423 2e-116 gi|15828290|ref|NP_302553.1| transmembrane protein [Mycobacteriu... 402 2e-110 gi|108801118|ref|YP_641315.1| hypothetical protein Mmcs_4154 [My... 392 3e-107 gi|342861663|ref|ZP_08718309.1| hypothetical protein MCOL_22356 ... 380 9e-104 gi|118462485|ref|YP_880443.1| permease of the major facilitator ... 377 1e-102 gi|254774080|ref|ZP_05215596.1| permease of the major facilitato... 375 3e-102 gi|254823418|ref|ZP_05228419.1| permease of the major facilitato... 375 4e-102 gi|333989658|ref|YP_004522272.1| transmembrane protein [Mycobact... 369 3e-100 gi|120405631|ref|YP_955460.1| hypothetical protein Mvan_4679 [My... 359 2e-97 gi|169628283|ref|YP_001701932.1| hypothetical protein MAB_1190 [... 342 4e-92 gi|118470477|ref|YP_889521.1| permease of the major facilitator ... 340 2e-91 gi|145222626|ref|YP_001133304.1| hypothetical protein Mflv_2038 ... 339 3e-91 gi|325676587|ref|ZP_08156265.1| MFS family major facilitator sup... 330 2e-88 gi|326381811|ref|ZP_08203504.1| hypothetical protein SCNU_02657 ... 328 4e-88 gi|229491936|ref|ZP_04385756.1| permease of the major facilitato... 328 5e-88 gi|262201570|ref|YP_003272778.1| hypothetical protein Gbro_1614 ... 328 6e-88 gi|226365310|ref|YP_002783093.1| hypothetical protein ROP_59010 ... 328 6e-88 gi|111022803|ref|YP_705775.1| hypothetical protein RHA1_ro05840 ... 328 8e-88 gi|312138722|ref|YP_004006058.1| integral membrane protein [Rhod... 326 2e-87 gi|343925069|ref|ZP_08764601.1| hypothetical protein GOALK_033_0... 317 1e-84 gi|226307757|ref|YP_002767717.1| hypothetical protein RER_42700 ... 313 2e-83 gi|333921118|ref|YP_004494699.1| major facilitator superfamily p... 307 1e-81 gi|296140837|ref|YP_003648080.1| hypothetical protein Tpau_3154 ... 307 1e-81 gi|54026811|ref|YP_121053.1| hypothetical protein nfa48370 [Noca... 301 7e-80 gi|340794907|ref|YP_004760370.1| hypothetical protein CVAR_1944 ... 296 3e-78 gi|2198497|emb|CAA74135.1| B1306.07 protein [Mycobacterium leprae] 288 4e-76 gi|38233519|ref|NP_939286.1| hypothetical protein DIP0923 [Coryn... 287 1e-75 gi|213965485|ref|ZP_03393680.1| permease of the major facilitato... 286 2e-75 gi|305682013|ref|ZP_07404817.1| putative membrane protein [Coryn... 285 6e-75 gi|225022979|ref|ZP_03712171.1| hypothetical protein CORMATOL_03... 284 1e-74 gi|317508379|ref|ZP_07966052.1| hypothetical protein HMPREF9336_... 283 2e-74 gi|296394386|ref|YP_003659270.1| hypothetical protein Srot_1982 ... 278 5e-73 gi|259506994|ref|ZP_05749894.1| integral membrane protein [Coryn... 276 2e-72 gi|68536558|ref|YP_251263.1| hypothetical protein jk1472 [Coryne... 276 3e-72 gi|336326160|ref|YP_004606126.1| hypothetical protein CRES_1609 ... 271 1e-70 gi|319949705|ref|ZP_08023736.1| hypothetical protein ES5_09555 [... 270 1e-70 gi|237785170|ref|YP_002905875.1| hypothetical protein ckrop_0561... 267 1e-69 gi|172040276|ref|YP_001799990.1| hypothetical protein cur_0596 [... 263 2e-68 gi|19552209|ref|NP_600211.1| hypothetical protein NCgl0944 [Cory... 263 2e-68 gi|145295134|ref|YP_001137955.1| hypothetical protein cgR_1077 [... 263 3e-68 gi|344044405|gb|EGV40082.1| major facilitator superfamily permea... 261 6e-68 gi|25027604|ref|NP_737658.1| hypothetical protein CE1048 [Coryne... 256 3e-66 gi|337290389|ref|YP_004629410.1| hypothetical protein CULC22_007... 252 3e-65 gi|300781604|ref|ZP_07091458.1| transmembrane protein [Corynebac... 251 7e-65 >gi|15608212|ref|NP_215588.1| transmembrane protein [Mycobacterium tuberculosis H37Rv] gi|15840507|ref|NP_335544.1| hypothetical protein MT1102 [Mycobacterium tuberculosis CDC1551] gi|31792263|ref|NP_854756.1| transmembrane protein [Mycobacterium bovis AF2122/97] 75 more sequence titles Length=278 Score = 542 bits (1396), Expect = 3e-152, Method: Compositional matrix adjust. Identities = 277/278 (99%), Positives = 278/278 (100%), Gaps = 0/278 (0%) Query 1 VRETSNPVFRSLPKQRGGYAQFGTGTAQQGFPADPYLAPYREAKATRPLTIDDVVTKTGL 60 +RETSNPVFRSLPKQRGGYAQFGTGTAQQGFPADPYLAPYREAKATRPLTIDDVVTKTGL Sbjct 1 MRETSNPVFRSLPKQRGGYAQFGTGTAQQGFPADPYLAPYREAKATRPLTIDDVVTKTGL 60 Query 61 TLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYAALE 120 TLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYAALE Sbjct 61 TLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYAALE 120 Query 121 GLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKFTRMVVA 180 GLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKFTRMVVA Sbjct 121 GLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKFTRMVVA 180 Query 181 ALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAADQM 240 ALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAADQM Sbjct 181 ALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAADQM 240 Query 241 IRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 IRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE Sbjct 241 IRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 >gi|121637001|ref|YP_977224.1| putative transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989474|ref|YP_002644161.1| putative transmembrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121492648|emb|CAL71117.1| Probable conserved transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772587|dbj|BAH25393.1| putative transmembrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601017|emb|CCC63689.1| probable conserved transmembrane protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=278 Score = 540 bits (1392), Expect = 8e-152, Method: Compositional matrix adjust. Identities = 276/278 (99%), Positives = 277/278 (99%), Gaps = 0/278 (0%) Query 1 VRETSNPVFRSLPKQRGGYAQFGTGTAQQGFPADPYLAPYREAKATRPLTIDDVVTKTGL 60 +RETSNPVFRSLPKQRGGYAQFGTGTAQQGFPADPYLAPYREAKATRPLTIDDVVTKTGL Sbjct 1 MRETSNPVFRSLPKQRGGYAQFGTGTAQQGFPADPYLAPYREAKATRPLTIDDVVTKTGL 60 Query 61 TLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYAALE 120 TLAMLAGTAVVSYFLV SNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYAALE Sbjct 61 TLAMLAGTAVVSYFLVVSNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYAALE 120 Query 121 GLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKFTRMVVA 180 GLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKFTRMVVA Sbjct 121 GLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKFTRMVVA 180 Query 181 ALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAADQM 240 ALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAADQM Sbjct 181 ALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAADQM 240 Query 241 IRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 IRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE Sbjct 241 IRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 >gi|240170295|ref|ZP_04748954.1| transmembrane protein [Mycobacterium kansasii ATCC 12478] Length=278 Score = 483 bits (1244), Expect = 1e-134, Method: Compositional matrix adjust. Identities = 242/278 (88%), Positives = 260/278 (94%), Gaps = 0/278 (0%) Query 1 VRETSNPVFRSLPKQRGGYAQFGTGTAQQGFPADPYLAPYREAKATRPLTIDDVVTKTGL 60 +RETSNPVFRSLPKQRGGYAQFG G AQ G+ DPY APY+E +A RPLTIDDVVTKTGL Sbjct 1 MRETSNPVFRSLPKQRGGYAQFGPGLAQPGYAGDPYAAPYQETRAARPLTIDDVVTKTGL 60 Query 61 TLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYAALE 120 TLA L +AVVSYFLVA N+ LAMPLTL+GALGGLALVLVATFGRKQDNPAIVL+YA LE Sbjct 61 TLATLTASAVVSYFLVAQNLNLAMPLTLIGALGGLALVLVATFGRKQDNPAIVLTYAGLE 120 Query 121 GLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKFTRMVVA 180 GLFLGA SFV+ANF+V SANAG+LIGEAILGT+GVFFGML+VYKTGAIRVTPKFTRMVVA Sbjct 121 GLFLGAFSFVMANFSVGSANAGMLIGEAILGTLGVFFGMLIVYKTGAIRVTPKFTRMVVA 180 Query 181 ALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAADQM 240 ALFGVL LMLGN VLAMF+VGGGEGLGLRSPGPLGIIFSLVCIGIAAF+FLIDFDAADQM Sbjct 181 ALFGVLFLMLGNFVLAMFHVGGGEGLGLRSPGPLGIIFSLVCIGIAAFTFLIDFDAADQM 240 Query 241 IRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 IRAGAP+KAAWG+ALGLTVTLVWLYIEILRLLSYLQN+ Sbjct 241 IRAGAPDKAAWGIALGLTVTLVWLYIEILRLLSYLQND 278 >gi|183984365|ref|YP_001852656.1| hypothetical protein MMAR_4394 [Mycobacterium marinum M] gi|183177691|gb|ACC42801.1| conserved hypothetical transmembrane protein [Mycobacterium marinum M] Length=280 Score = 425 bits (1093), Expect = 3e-117, Method: Compositional matrix adjust. Identities = 240/281 (86%), Positives = 256/281 (92%), Gaps = 4/281 (1%) Query 1 VRETSNPVFRSLPKQRGGYAQFGTGTAQQGFPADPYLAPY---REAKATRPLTIDDVVTK 57 +RETSNPVFRSLPKQRGGYAQFGTG DPY+APY R+A TRPLTIDDVVTK Sbjct 1 MRETSNPVFRSLPKQRGGYAQFGTGAGAGYA-GDPYMAPYQETRDAGTTRPLTIDDVVTK 59 Query 58 TGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYA 117 TGLTLAML+ TAVVSYFLVA N+ALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYA Sbjct 60 TGLTLAMLSATAVVSYFLVAQNIALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYA 119 Query 118 ALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKFTRM 177 ALEGLFLGA+SFVLA +TV SANAGVLIGEA+LGT+GVFFGMLVVYKTGAIRVTP+FTRM Sbjct 120 ALEGLFLGAVSFVLAAYTVGSANAGVLIGEAVLGTLGVFFGMLVVYKTGAIRVTPRFTRM 179 Query 178 VVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAA 237 +VAA+FG L LMLGN +L MF VGGGEGLGLRS GPL I+FSLV IGIAAFSFLIDFDAA Sbjct 180 IVAAMFGALALMLGNFLLGMFGVGGGEGLGLRSGGPLAILFSLVVIGIAAFSFLIDFDAA 239 Query 238 DQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 DQMIRAGAPEKAAWG+ALGLTVTLVWLYIEILRLLSYLQN+ Sbjct 240 DQMIRAGAPEKAAWGIALGLTVTLVWLYIEILRLLSYLQND 280 >gi|296169937|ref|ZP_06851546.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895401|gb|EFG75106.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=312 Score = 423 bits (1087), Expect = 1e-116, Method: Compositional matrix adjust. Identities = 240/283 (85%), Positives = 263/283 (93%), Gaps = 5/283 (1%) Query 1 VRETSNPVFRSLPKQRGGYAQFGTGTA-QQGFPADPY----LAPYREAKATRPLTIDDVV 55 VRETSNPVFRSLPKQRGGYAQFGTG A QG+ ADPY APY+EA+A+RPLTIDDVV Sbjct 30 VRETSNPVFRSLPKQRGGYAQFGTGAAPMQGYGADPYAAPYQAPYQEARASRPLTIDDVV 89 Query 56 TKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLS 115 TKTG+TLA+LA +AVVSYFLV++N+ALAMPLTL+GALGGL LVLVATFGRKQD+PAIVLS Sbjct 90 TKTGITLAVLAVSAVVSYFLVSANLALAMPLTLIGALGGLGLVLVATFGRKQDSPAIVLS 149 Query 116 YAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKFT 175 YA LEGLFLGA+SFV ANF+V++ANAGVLIGEA++GT GVFFGMLVVYKTGAIRVTPKFT Sbjct 150 YAVLEGLFLGALSFVFANFSVSNANAGVLIGEAVMGTFGVFFGMLVVYKTGAIRVTPKFT 209 Query 176 RMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFD 235 RM+VAA+FGVL LMLGN VLAMF VGGG GLGLRS GPL IIFSLVCIGIAAFSFLIDFD Sbjct 210 RMLVAAMFGVLALMLGNFVLAMFGVGGGAGLGLRSGGPLAIIFSLVCIGIAAFSFLIDFD 269 Query 236 AADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 AADQM+RAGAPEKAAWG+ALGLTVTLVWLYIEILRLLSYLQN+ Sbjct 270 AADQMVRAGAPEKAAWGIALGLTVTLVWLYIEILRLLSYLQND 312 >gi|118616097|ref|YP_904429.1| hypothetical protein MUL_0208 [Mycobacterium ulcerans Agy99] gi|118568207|gb|ABL02958.1| conserved hypothetical transmembrane protein [Mycobacterium ulcerans Agy99] Length=280 Score = 423 bits (1087), Expect = 2e-116, Method: Compositional matrix adjust. Identities = 238/281 (85%), Positives = 255/281 (91%), Gaps = 4/281 (1%) Query 1 VRETSNPVFRSLPKQRGGYAQFGTGTAQQGFPADPYLAPYREAK---ATRPLTIDDVVTK 57 +RETSNPVFRSLPKQRGGYAQFGTG DPY+APY+EA+ TRPLTIDDVVTK Sbjct 1 MRETSNPVFRSLPKQRGGYAQFGTGAGAGYA-GDPYMAPYQEARDAGTTRPLTIDDVVTK 59 Query 58 TGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYA 117 TGLTLAML+ TAVVSYFLVA N+ALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYA Sbjct 60 TGLTLAMLSATAVVSYFLVAQNIALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYA 119 Query 118 ALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKFTRM 177 ALEGLFLGA+S VLA +TV S NAGVLIGEA+LGT+GVFFGMLVVYKTGAIRVTP+FTRM Sbjct 120 ALEGLFLGAVSLVLAAYTVGSVNAGVLIGEAVLGTLGVFFGMLVVYKTGAIRVTPRFTRM 179 Query 178 VVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAA 237 +VAA+FG L LMLGN +L MF VGGGEGLGLRS GPL I+FSLV IGIAAFSFLIDFDAA Sbjct 180 IVAAMFGALALMLGNFLLGMFGVGGGEGLGLRSGGPLAILFSLVVIGIAAFSFLIDFDAA 239 Query 238 DQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 DQMIRAGAPEKAAWG+ALGLTVTLVWLYIEILRLLSYLQN+ Sbjct 240 DQMIRAGAPEKAAWGIALGLTVTLVWLYIEILRLLSYLQND 280 >gi|41407117|ref|NP_959953.1| hypothetical protein MAP1019 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395468|gb|AAS03336.1| hypothetical protein MAP_1019 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336461459|gb|EGO40329.1| putative membrane protein [Mycobacterium avium subsp. paratuberculosis S397] Length=283 Score = 423 bits (1087), Expect = 2e-116, Method: Compositional matrix adjust. Identities = 243/283 (86%), Positives = 260/283 (92%), Gaps = 5/283 (1%) Query 1 VRETSNPVFRSLPKQRGGYAQFGTGTA-QQGFPADPYLAPY----REAKATRPLTIDDVV 55 +RETSNPVFRSLPKQ GGYAQFGTG A QG+ ADPY APY +E +A+RPLTIDDVV Sbjct 1 MRETSNPVFRSLPKQSGGYAQFGTGAAPMQGYQADPYAAPYATPYQETRASRPLTIDDVV 60 Query 56 TKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLS 115 TKTG+TLA+LA +AVVSYFLV SNVALAMPLTLVGALGGL LVLVATFGRKQD+PAIVLS Sbjct 61 TKTGITLAVLAASAVVSYFLVLSNVALAMPLTLVGALGGLGLVLVATFGRKQDSPAIVLS 120 Query 116 YAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKFT 175 YA LEGLFLGA+SFV ANF+V+SANAGVLIGEA++GT GVFFGMLVVYKTGAIRVTPKFT Sbjct 121 YAVLEGLFLGALSFVFANFSVSSANAGVLIGEAVMGTFGVFFGMLVVYKTGAIRVTPKFT 180 Query 176 RMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFD 235 RMVVAALFGVL LMLGN VLAMF VGGG GLGLRS GPL IIFSLVCIGIAAFSFLIDFD Sbjct 181 RMVVAALFGVLALMLGNFVLAMFGVGGGAGLGLRSGGPLAIIFSLVCIGIAAFSFLIDFD 240 Query 236 AADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 AADQM+RAGAPEKAAWG+ALGLTVTLVWLYIEILRLLSYLQN+ Sbjct 241 AADQMVRAGAPEKAAWGIALGLTVTLVWLYIEILRLLSYLQND 283 >gi|15828290|ref|NP_302553.1| transmembrane protein [Mycobacterium leprae TN] gi|221230767|ref|YP_002504183.1| putative transmembrane protein [Mycobacterium leprae Br4923] gi|13093983|emb|CAC31916.1| probable transmembrane protein [Mycobacterium leprae] gi|219933874|emb|CAR72498.1| probable transmembrane protein [Mycobacterium leprae Br4923] Length=285 Score = 402 bits (1034), Expect = 2e-110, Method: Compositional matrix adjust. Identities = 221/285 (78%), Positives = 249/285 (88%), Gaps = 7/285 (2%) Query 1 VRETSNPVFRSLPKQRGGYAQFGTGTA--QQGF-PADPYLA-PYREAKA---TRPLTIDD 53 +RETSNPVFRSLPKQRGGYA+FGT A QQG+ DPY A PY+E +A +RPLTIDD Sbjct 1 MRETSNPVFRSLPKQRGGYARFGTDAAPMQQGYYQPDPYAATPYQETRAYQVSRPLTIDD 60 Query 54 VVTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIV 113 VVT+TG+TLA+L +A+VS+FLVASN ALA PLTL G GGLA+VLVATFG KQ++PAIV Sbjct 61 VVTRTGMTLAVLVVSAIVSFFLVASNFALATPLTLAGVFGGLAMVLVATFGGKQNSPAIV 120 Query 114 LSYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPK 173 LSYA LEGLFLGA+SF+ ANF V++ NAGVLIGEA+LGT GVFFGMLVVYKTGAIRVTPK Sbjct 121 LSYAVLEGLFLGAVSFLFANFQVSTVNAGVLIGEAVLGTFGVFFGMLVVYKTGAIRVTPK 180 Query 174 FTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLID 233 FTRM+VA FGVL LMLGN VLAMF +GGG GLGLRS GP+ I+FSL CIGIAAF FL+D Sbjct 181 FTRMLVAGTFGVLALMLGNFVLAMFGLGGGTGLGLRSGGPVAILFSLACIGIAAFGFLLD 240 Query 234 FDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 FDAADQMIRAGAPEKAAWG+ALGLTVTLVWLY+EILRLLSYLQN+ Sbjct 241 FDAADQMIRAGAPEKAAWGIALGLTVTLVWLYVEILRLLSYLQND 285 >gi|108801118|ref|YP_641315.1| hypothetical protein Mmcs_4154 [Mycobacterium sp. MCS] gi|119870259|ref|YP_940211.1| hypothetical protein Mkms_4229 [Mycobacterium sp. KMS] gi|126436956|ref|YP_001072647.1| hypothetical protein Mjls_4385 [Mycobacterium sp. JLS] gi|108771537|gb|ABG10259.1| protein of unknown function DUF1112 [Mycobacterium sp. MCS] gi|119696348|gb|ABL93421.1| protein of unknown function DUF1112 [Mycobacterium sp. KMS] gi|126236756|gb|ABO00157.1| protein of unknown function DUF1112 [Mycobacterium sp. JLS] Length=282 Score = 392 bits (1008), Expect = 3e-107, Method: Compositional matrix adjust. Identities = 212/282 (76%), Positives = 237/282 (85%), Gaps = 4/282 (1%) Query 1 VRETSNPVFRSLPKQRGGYAQFGTGTA---QQGFPADPYLAPYREAKAT-RPLTIDDVVT 56 +RE+SNPVFRSLPK +GGYA FGTG A Q A+PY Y E RP+TIDDVVT Sbjct 1 MRESSNPVFRSLPKTQGGYATFGTGAAGYGAQQVHAEPYTTQYPEQTGVARPMTIDDVVT 60 Query 57 KTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSY 116 KTG+TLA+L+ AVVSYFLV N ALA PLT++GA+GGL +VL+ATFGRKQDNP +VL+Y Sbjct 61 KTGITLAVLSAVAVVSYFLVGMNPALAGPLTMIGAIGGLVVVLIATFGRKQDNPGVVLTY 120 Query 117 AALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKFTR 176 A LEGLFLGAIS++ N VA NAG LI +A+L T GVFFGMLVVYKTGAIRVTPKFTR Sbjct 121 AGLEGLFLGAISWLFGNVIVAGGNAGALITQALLATFGVFFGMLVVYKTGAIRVTPKFTR 180 Query 177 MVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDA 236 M+VA LFGVLVLMLGN VLA+F VGGGEG+GLRS G + IIFSLVCIG+AAFSFLIDFDA Sbjct 181 MIVAGLFGVLVLMLGNFVLALFGVGGGEGMGLRSGGTIAIIFSLVCIGLAAFSFLIDFDA 240 Query 237 ADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 ADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSY QN+ Sbjct 241 ADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYFQND 282 >gi|342861663|ref|ZP_08718309.1| hypothetical protein MCOL_22356 [Mycobacterium colombiense CECT 3035] gi|342130797|gb|EGT84093.1| hypothetical protein MCOL_22356 [Mycobacterium colombiense CECT 3035] Length=257 Score = 380 bits (977), Expect = 9e-104, Method: Compositional matrix adjust. Identities = 210/253 (84%), Positives = 228/253 (91%), Gaps = 4/253 (1%) Query 30 GFPADPYLAPYR----EAKATRPLTIDDVVTKTGLTLAMLAGTAVVSYFLVASNVALAMP 85 G+ ADPY APY+ EAKA+RPLTIDDVVTKTG+TLA+LA +AVVSYFLVA +VALAMP Sbjct 5 GYGADPYAAPYQAPYQEAKASRPLTIDDVVTKTGITLAVLALSAVVSYFLVARDVALAMP 64 Query 86 LTLVGALGGLALVLVATFGRKQDNPAIVLSYAALEGLFLGAISFVLANFTVASANAGVLI 145 L LVG LGGL LVLVATFGRKQDNP IVLSYA LEGL LGAISFV ANF+V++ANAG LI Sbjct 65 LALVGGLGGLVLVLVATFGRKQDNPGIVLSYAVLEGLVLGAISFVFANFSVSNANAGALI 124 Query 146 GEAILGTMGVFFGMLVVYKTGAIRVTPKFTRMVVAALFGVLVLMLGNLVLAMFNVGGGEG 205 GEA+LGT GVFFGMLVVYKTGAIRVTPKFTRM+VAA+FGVL LMLGN VLAMF+V GG G Sbjct 125 GEAVLGTFGVFFGMLVVYKTGAIRVTPKFTRMLVAAMFGVLALMLGNFVLAMFHVNGGTG 184 Query 206 LGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAADQMIRAGAPEKAAWGVALGLTVTLVWLY 265 LGLRS G + IIFSLVCI IAAFSFLIDFDAADQM+RAGAPEKAAWG+ALGLTVTLVWLY Sbjct 185 LGLRSGGTVAIIFSLVCIAIAAFSFLIDFDAADQMVRAGAPEKAAWGIALGLTVTLVWLY 244 Query 266 IEILRLLSYLQNE 278 IEILRLLSYLQN+ Sbjct 245 IEILRLLSYLQND 257 >gi|118462485|ref|YP_880443.1| permease of the major facilitator superfamily protein [Mycobacterium avium 104] gi|118163772|gb|ABK64669.1| permease of the major facilitator superfamily protein [Mycobacterium avium 104] Length=255 Score = 377 bits (968), Expect = 1e-102, Method: Compositional matrix adjust. Identities = 219/254 (87%), Positives = 235/254 (93%), Gaps = 4/254 (1%) Query 29 QGFPADPYLAPY----REAKATRPLTIDDVVTKTGLTLAMLAGTAVVSYFLVASNVALAM 84 QG+ ADPY APY +E +A+RPLTIDDVVTKTG+TLA+LA +AVVSYFLV SNVALAM Sbjct 2 QGYQADPYAAPYATPYQETRASRPLTIDDVVTKTGITLAVLAASAVVSYFLVLSNVALAM 61 Query 85 PLTLVGALGGLALVLVATFGRKQDNPAIVLSYAALEGLFLGAISFVLANFTVASANAGVL 144 PLTLVGALGGL LVLVATFGRKQD+PAIVLSYA LEGLFLGA+SFV ANF+V+SANAGVL Sbjct 62 PLTLVGALGGLGLVLVATFGRKQDSPAIVLSYAVLEGLFLGALSFVFANFSVSSANAGVL 121 Query 145 IGEAILGTMGVFFGMLVVYKTGAIRVTPKFTRMVVAALFGVLVLMLGNLVLAMFNVGGGE 204 IGEA++GT GVFFGMLVVYKTGAIRVTPKFTRMVVAALFGVL LMLGN VLAMF VGGG Sbjct 122 IGEAVMGTFGVFFGMLVVYKTGAIRVTPKFTRMVVAALFGVLALMLGNFVLAMFGVGGGA 181 Query 205 GLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAADQMIRAGAPEKAAWGVALGLTVTLVWL 264 GLGLRS GPL IIFSLVCIGIAAFSFLIDFDAADQM+RAGAPEKAAWG+ALGLTVTLVWL Sbjct 182 GLGLRSGGPLAIIFSLVCIGIAAFSFLIDFDAADQMVRAGAPEKAAWGIALGLTVTLVWL 241 Query 265 YIEILRLLSYLQNE 278 YIEILRLLSYLQN+ Sbjct 242 YIEILRLLSYLQND 255 >gi|254774080|ref|ZP_05215596.1| permease of the major facilitator superfamily protein [Mycobacterium avium subsp. avium ATCC 25291] Length=255 Score = 375 bits (964), Expect = 3e-102, Method: Compositional matrix adjust. Identities = 218/254 (86%), Positives = 234/254 (93%), Gaps = 4/254 (1%) Query 29 QGFPADPYLAPY----REAKATRPLTIDDVVTKTGLTLAMLAGTAVVSYFLVASNVALAM 84 QG+ ADPY APY +E +A+RPLTIDDVVTKTG+TLA+LA +AVVSYFLV SNVALAM Sbjct 2 QGYQADPYAAPYATPYQETRASRPLTIDDVVTKTGITLAVLAASAVVSYFLVLSNVALAM 61 Query 85 PLTLVGALGGLALVLVATFGRKQDNPAIVLSYAALEGLFLGAISFVLANFTVASANAGVL 144 PLTLVGALGGL LVLVATFGRKQD+PAIVLSYA LEGLFLGA+SFV ANF+V+SANAGVL Sbjct 62 PLTLVGALGGLGLVLVATFGRKQDSPAIVLSYAVLEGLFLGALSFVFANFSVSSANAGVL 121 Query 145 IGEAILGTMGVFFGMLVVYKTGAIRVTPKFTRMVVAALFGVLVLMLGNLVLAMFNVGGGE 204 IGEA++GT GVFFGMLVVYKTGAIRVTPKFTRMVV ALFGVL LMLGN VLAMF VGGG Sbjct 122 IGEAVMGTFGVFFGMLVVYKTGAIRVTPKFTRMVVVALFGVLALMLGNFVLAMFGVGGGA 181 Query 205 GLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAADQMIRAGAPEKAAWGVALGLTVTLVWL 264 GLGLRS GPL IIFSLVCIGIAAFSFLIDFDAADQM+RAGAPEKAAWG+ALGLTVTLVWL Sbjct 182 GLGLRSGGPLAIIFSLVCIGIAAFSFLIDFDAADQMVRAGAPEKAAWGIALGLTVTLVWL 241 Query 265 YIEILRLLSYLQNE 278 YIEILRLLSYLQN+ Sbjct 242 YIEILRLLSYLQND 255 >gi|254823418|ref|ZP_05228419.1| permease of the major facilitator superfamily protein [Mycobacterium intracellulare ATCC 13950] Length=255 Score = 375 bits (963), Expect = 4e-102, Method: Compositional matrix adjust. Identities = 215/254 (85%), Positives = 235/254 (93%), Gaps = 4/254 (1%) Query 29 QGFPADPY----LAPYREAKATRPLTIDDVVTKTGLTLAMLAGTAVVSYFLVASNVALAM 84 QG+ ADPY APY+EA+ +RPLTIDDVVTKTG+TLA+LA +AVVSYFLV SN+ALAM Sbjct 2 QGYQADPYAAPYQAPYQEARPSRPLTIDDVVTKTGITLAVLAASAVVSYFLVVSNLALAM 61 Query 85 PLTLVGALGGLALVLVATFGRKQDNPAIVLSYAALEGLFLGAISFVLANFTVASANAGVL 144 PLTL+GALGGL LVLVATFGRKQD+PAIVLSYA LEGLFLGA+SFV A+F+V++ANAGVL Sbjct 62 PLTLIGALGGLGLVLVATFGRKQDSPAIVLSYAVLEGLFLGALSFVFAHFSVSNANAGVL 121 Query 145 IGEAILGTMGVFFGMLVVYKTGAIRVTPKFTRMVVAALFGVLVLMLGNLVLAMFNVGGGE 204 IGEA++GT GVFFGMLVVYKTGAIRVTPKFTRMVVAALFGVL LMLGN VLAMF VGGG Sbjct 122 IGEAVMGTFGVFFGMLVVYKTGAIRVTPKFTRMVVAALFGVLALMLGNFVLAMFGVGGGA 181 Query 205 GLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAADQMIRAGAPEKAAWGVALGLTVTLVWL 264 GLGLRS GPL IIFSLVCIGIAAFSFLIDFDAADQM+RAGAPEKAAWG+ALGLTVTLVWL Sbjct 182 GLGLRSGGPLAIIFSLVCIGIAAFSFLIDFDAADQMVRAGAPEKAAWGIALGLTVTLVWL 241 Query 265 YIEILRLLSYLQNE 278 YIEILRLLSYLQN+ Sbjct 242 YIEILRLLSYLQND 255 >gi|333989658|ref|YP_004522272.1| transmembrane protein [Mycobacterium sp. JDM601] gi|333485626|gb|AEF35018.1| transmembrane protein [Mycobacterium sp. JDM601] Length=287 Score = 369 bits (947), Expect = 3e-100, Method: Compositional matrix adjust. Identities = 207/288 (72%), Positives = 239/288 (83%), Gaps = 11/288 (3%) Query 1 VRETSNPVFRSLPKQRGGYAQFGTGTAQ----------QGFPADPYLAPYREAKATRPLT 50 +RETSNPVFRSLPKQ GGYAQFGTG Q QG+P + + +RPLT Sbjct 1 MRETSNPVFRSLPKQ-GGYAQFGTGVGQATAGATQQMSQGYPGLQSPQTDYQREVSRPLT 59 Query 51 IDDVVTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNP 110 IDDVVTKTG+TL +L+ A+VS+FLV++N ALA PLT +GA GGLALV+VA F R+QD+ Sbjct 60 IDDVVTKTGMTLGVLSIAAIVSFFLVSANQALAAPLTFIGAFGGLALVMVAMFTRRQDSK 119 Query 111 AIVLSYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRV 170 A+VLSYA LEGLFLGAISFVL TV ++NAG +IG+A++GT GVF GMLVVYKTGAIRV Sbjct 120 ALVLSYAVLEGLFLGAISFVLTAVTVGTSNAGSMIGQAVMGTFGVFGGMLVVYKTGAIRV 179 Query 171 TPKFTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSF 230 TPKFTRM+V ALFGVL LM+GNLVL++F VGGG+GLGLRS G L IIFSLVCIGIAAFSF Sbjct 180 TPKFTRMIVGALFGVLALMIGNLVLSLFGVGGGDGLGLRSGGTLSIIFSLVCIGIAAFSF 239 Query 231 LIDFDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 LIDFDAADQ+IRAGAPEKAAWG+ALGLTVTLVWLY+EILRLLSY Q+E Sbjct 240 LIDFDAADQLIRAGAPEKAAWGIALGLTVTLVWLYLEILRLLSYFQSE 287 >gi|120405631|ref|YP_955460.1| hypothetical protein Mvan_4679 [Mycobacterium vanbaalenii PYR-1] gi|119958449|gb|ABM15454.1| protein of unknown function DUF1112 [Mycobacterium vanbaalenii PYR-1] Length=283 Score = 359 bits (922), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 210/285 (74%), Positives = 240/285 (85%), Gaps = 9/285 (3%) Query 1 VRETSNPVFRSLPK-QRGGYAQFGTGTA---QQGFPADPYLAPY---REAKATRPLTIDD 53 +RE+SNPVFRSLPK Q+GGYAQFGTG A Q ADPY+ Y ++A +R LTIDD Sbjct 1 MRESSNPVFRSLPKGQQGGYAQFGTGAAGYGAQAVHADPYVTQYPEQQQAGVSRALTIDD 60 Query 54 VVTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIV 113 VVTKTG+TLA+L AVVSY+LV+ N+ LAMP TLVGALGGLALVL+ATFGRKQDNPAIV Sbjct 61 VVTKTGMTLAVLTAVAVVSYYLVSQNLGLAMPFTLVGALGGLALVLIATFGRKQDNPAIV 120 Query 114 LSYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPK 173 LSYAALEGLFLGA+SFV+AN +AS +I +AI+GT+GVFFGMLVVYKTGAIRVTPK Sbjct 121 LSYAALEGLFLGAVSFVIAN--IASVGGVGMIAQAIVGTLGVFFGMLVVYKTGAIRVTPK 178 Query 174 FTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLID 233 FTRM+VA LFGV+ LML NLVL +F VGGG GLGLR G + I FSL+CI +AAFSFLID Sbjct 179 FTRMIVAGLFGVVALMLLNLVLGLFGVGGGAGLGLRDGGAIAIGFSLLCIALAAFSFLID 238 Query 234 FDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 FDAADQM+RAGAPEKAAWG+ALGLTVTLVWLY+EILRLLSY N+ Sbjct 239 FDAADQMVRAGAPEKAAWGIALGLTVTLVWLYLEILRLLSYFNND 283 >gi|169628283|ref|YP_001701932.1| hypothetical protein MAB_1190 [Mycobacterium abscessus ATCC 19977] gi|169240250|emb|CAM61278.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=281 Score = 342 bits (877), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 187/286 (66%), Positives = 218/286 (77%), Gaps = 13/286 (4%) Query 1 VRETSNPVFRSLPKQRGGYAQFGTGTAQQG-------FPADPYLA-PYREAKATRPLTID 52 +R TSNP+ R+LP + GG A DPY A P +A +RPLTID Sbjct 1 MRTTSNPILRTLPGKEGGGYAQFGAGAAGAGAMAAQQMRQDPYTAYPEAQAGVSRPLTID 60 Query 53 DVVTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAI 112 DVVTKTG+TL ++ AV S+FLV++N LA+P LVG GGL +V +A+FGRKQDNPAI Sbjct 61 DVVTKTGITLGVIVAVAVASFFLVSTNPGLALPFLLVGGFGGLIMVAIASFGRKQDNPAI 120 Query 113 VLSYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTP 172 VLSYAALEGLF+GAISF L F VA ANAG LIG+AILGT+GVF GML VY++GAIRVTP Sbjct 121 VLSYAALEGLFVGAISFAL-TFQVAGANAGALIGQAILGTVGVFIGMLFVYRSGAIRVTP 179 Query 173 KFTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLI 232 KF RM++A L GVLVL LGN+VL F G +GLRS GP+ IIFSLVCIG+AAFSFLI Sbjct 180 KFQRMLLAGLVGVLVLALGNMVLGFF----GIDMGLRSGGPIAIIFSLVCIGLAAFSFLI 235 Query 233 DFDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 DFDAADQM+RAGAPEKAAWG+ALGL VTLVWLY+EILRLLSY QN+ Sbjct 236 DFDAADQMVRAGAPEKAAWGIALGLAVTLVWLYVEILRLLSYFQND 281 >gi|118470477|ref|YP_889521.1| permease of the major facilitator superfamily protein [Mycobacterium smegmatis str. MC2 155] gi|118171764|gb|ABK72660.1| permease of the major facilitator superfamily protein [Mycobacterium smegmatis str. MC2 155] Length=278 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 181/284 (64%), Positives = 217/284 (77%), Gaps = 12/284 (4%) Query 1 VRETSNPVFRSLPKQRGGYAQFGTGTA---QQGFPADPYLAPYREAKA---TRPLTIDDV 54 +RE+SNPVFRSLPK +GGYA FGTG A Q A Y Y + + RPLTIDDV Sbjct 1 MRESSNPVFRSLPKTQGGYATFGTGAAGYGAQQVHAQQYAPEYLDKQQPGVARPLTIDDV 60 Query 55 VTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVL 114 VT+TG++LA+++ VVSYFLVA N L MP +G++GGL LVL+ATFGRKQDNPAIVL Sbjct 61 VTRTGISLAIVSLVGVVSYFLVAGNPGLMMPTFFLGSIGGLVLVLIATFGRKQDNPAIVL 120 Query 115 SYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKF 174 SYAA EGLF+G+ SF+ AN + S+ +I +A++ T GVFFGMLVVYKTGAIRVTPKF Sbjct 121 SYAAFEGLFVGSASFLFAN--LVSSGGPAMIFQAVVATFGVFFGMLVVYKTGAIRVTPKF 178 Query 175 TRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDF 234 TRM++A +FGV+ L + N++ A+F L GPL I FSL+CIG+AAFSFLIDF Sbjct 179 TRMIIAGIFGVVALAIVNILFAIFT----GNAPLTDGGPLAIGFSLLCIGLAAFSFLIDF 234 Query 235 DAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 DAADQMIRAGAPEKAAWG+ALGLTVTLVWLYIEILRLLSY N+ Sbjct 235 DAADQMIRAGAPEKAAWGIALGLTVTLVWLYIEILRLLSYFNND 278 >gi|145222626|ref|YP_001133304.1| hypothetical protein Mflv_2038 [Mycobacterium gilvum PYR-GCK] gi|315443091|ref|YP_004075970.1| hypothetical protein Mspyr1_14620 [Mycobacterium sp. Spyr1] gi|145215112|gb|ABP44516.1| protein of unknown function DUF1112 [Mycobacterium gilvum PYR-GCK] gi|315261394|gb|ADT98135.1| predicted membrane protein [Mycobacterium sp. Spyr1] Length=285 Score = 339 bits (869), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 213/287 (75%), Positives = 238/287 (83%), Gaps = 11/287 (3%) Query 1 VRETSNPVFRSLPKQR-GGYAQFGTGTAQQG----FPADPYLA---PYREAKA-TRPLTI 51 +RE+SNPVFRSLPKQ+ GGYAQFGTG A ADPY + P ++ + +R LTI Sbjct 1 MRESSNPVFRSLPKQQQGGYAQFGTGAAAGYGAQAVHADPYTSQQYPDQQQRGVSRALTI 60 Query 52 DDVVTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPA 111 DDVV KTG+TL +L AVVSYFLV+ NV LAMP TLVGALGGLALVLVATFGRKQDNPA Sbjct 61 DDVVMKTGMTLGVLTAVAVVSYFLVSGNVGLAMPFTLVGALGGLALVLVATFGRKQDNPA 120 Query 112 IVLSYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVT 171 IVLSYAALEGLFLGAISFVLAN + S +I +AI+GT+GVFFGMLVVYKTGAIRVT Sbjct 121 IVLSYAALEGLFLGAISFVLAN--IVSVGGVGMIAQAIVGTLGVFFGMLVVYKTGAIRVT 178 Query 172 PKFTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFL 231 PKFTRM+VA LFGV+ LML NLVLA+F VGGG GLGLR G L I FSL+CIG+AAFSFL Sbjct 179 PKFTRMIVAGLFGVVALMLLNLVLALFGVGGGAGLGLRDGGMLAIGFSLLCIGLAAFSFL 238 Query 232 IDFDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 IDFDAADQM+RAGAPEKAAWG+ALGLTVTLVWLY+EILRLLSY N+ Sbjct 239 IDFDAADQMVRAGAPEKAAWGIALGLTVTLVWLYLEILRLLSYFNND 285 >gi|325676587|ref|ZP_08156265.1| MFS family major facilitator superfamily transporter [Rhodococcus equi ATCC 33707] gi|325552765|gb|EGD22449.1| MFS family major facilitator superfamily transporter [Rhodococcus equi ATCC 33707] Length=284 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 173/284 (61%), Positives = 207/284 (73%), Gaps = 9/284 (3%) Query 1 VRETSNPVFRSLPKQRG-GYAQFGTGTAQQGFPADPYLAPYR-----EAKATRPLTIDDV 54 VR TSNPVF++LPKQ G GYA FG+ A A Y Y + R +TIDDV Sbjct 4 VRTTSNPVFKNLPKQEGTGYATFGSAQAGGAQVAQEYGQQYGAPEQFQQTTQRAMTIDDV 63 Query 55 VTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVL 114 VTKT +TL +L +A+VSYFLV N LA P + G L G LV+VA+FGRK DNPAIVL Sbjct 64 VTKTAITLGVLTISAIVSYFLVDGNTNLAAPFVIGGGLIGFVLVMVASFGRKMDNPAIVL 123 Query 115 SYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKF 174 +YAA EG+FLGA+SF+ N +LIG+A+LGT GVFFGMLVVYKTGAIRVTP+ Sbjct 124 AYAACEGVFLGALSFMFTNVEFGGVGGSMLIGQAVLGTFGVFFGMLVVYKTGAIRVTPRL 183 Query 175 TRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDF 234 TRM++ L GV+VLM+GNL+ + F G G GLR G + I+FSLVCI +AAFSFL+DF Sbjct 184 TRMIIGGLIGVMVLMIGNLIASFFTDG---GFGLRDGGTVAIVFSLVCIALAAFSFLLDF 240 Query 235 DAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 DAAD++IRA APEKAAWGVALGLTVTLVWLY+EILRLLSY N+ Sbjct 241 DAADELIRAQAPEKAAWGVALGLTVTLVWLYVEILRLLSYFNND 284 >gi|326381811|ref|ZP_08203504.1| hypothetical protein SCNU_02657 [Gordonia neofelifaecis NRRL B-59395] gi|326199237|gb|EGD56418.1| hypothetical protein SCNU_02657 [Gordonia neofelifaecis NRRL B-59395] Length=288 Score = 328 bits (842), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 175/292 (60%), Positives = 217/292 (75%), Gaps = 18/292 (6%) Query 1 VRETSNPVFRSL----PKQRGGYAQFGTGTAQQGFPA---------DPYLAPYREAKATR 47 +RE+SNP+ R + K+ GGYA FG G A G + + Y Y TR Sbjct 1 MRESSNPIMRGVVRDNKKEAGGYASFGQGLAGAGQASMATGQQQYTEQYTQGYAPRTDTR 60 Query 48 PLTIDDVVTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQ 107 P+TIDDVVTKT +TL +L A +Y+ ++ LA PL VGA+GGL LVL+A+FGRKQ Sbjct 61 PMTIDDVVTKTAMTLGVLIVVAACAYYAISQQATLASPLMAVGAIGGLVLVLIASFGRKQ 120 Query 108 DNPAIVLSYAALEGLFLGAISFVLANFTVASA-NAGVLIGEAILGTMGVFFGMLVVYKTG 166 DNPAIVL+YAA EGLF+G+IS+V N+ ++ +AGVLIG+A+LGT+GVF GMLVVYK G Sbjct 121 DNPAIVLTYAAFEGLFVGSISYVFGNWVISGGTSAGVLIGQAVLGTVGVFVGMLVVYKVG 180 Query 167 AIRVTPKFTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIA 226 AIRVTP+FTRM++A + GVLVLMLGNLVL +F V G LR GP+ IIFSLVCI +A Sbjct 181 AIRVTPRFTRMLMAGMVGVLVLMLGNLVLGLFGVNSG----LRDGGPIAIIFSLVCIALA 236 Query 227 AFSFLIDFDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 AFSFL+DFD AD++IRAGAP KAAWGVALGLTVTLVWLY+EILRLLSY+ ++ Sbjct 237 AFSFLLDFDQADELIRAGAPSKAAWGVALGLTVTLVWLYVEILRLLSYINSD 288 >gi|229491936|ref|ZP_04385756.1| permease of the major facilitator family protein [Rhodococcus erythropolis SK121] gi|229321149|gb|EEN86950.1| permease of the major facilitator family protein [Rhodococcus erythropolis SK121] Length=283 Score = 328 bits (842), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 187/286 (66%), Positives = 214/286 (75%), Gaps = 11/286 (3%) Query 1 VRETSNPVFRSLPKQRG-GYAQFGTGTA-------QQGFPADPYLAPYREAKATRPLTID 52 +R TSNPVFR+LPKQ G GYA FG+ TA Q G P PY+ +R +TID Sbjct 1 MRTTSNPVFRNLPKQEGNGYASFGSATAGASQATQQFGQPQYAPAEPYQTGPTSRAMTID 60 Query 53 DVVTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAI 112 DVVTKTG+TL +L +A+VSYFLV +NV LA PL + G L GL LVLVATFGRK DNPAI Sbjct 61 DVVTKTGITLGVLTISALVSYFLVNNNVDLATPLVIGGGLVGLVLVLVATFGRKMDNPAI 120 Query 113 VLSYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTP 172 VL+YA EGLFLGA+SF+ + LI +A+LGT GVFFGMLVVYKTGAIRVTP Sbjct 121 VLAYAVAEGLFLGALSFMFTDIQFGGVGGSALIAQAVLGTFGVFFGMLVVYKTGAIRVTP 180 Query 173 KFTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLI 232 + TRM++ AL GV+VL LGNLV + F G GLGLR G L IIFSLVCIGIAAFSFL+ Sbjct 181 RLTRMIIGALIGVVVLALGNLVASFFVEG---GLGLRDGGTLAIIFSLVCIGIAAFSFLL 237 Query 233 DFDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 DFDAADQ+IRA APEKAAWGVA GLTVTLVWLY+EILRLLSY N+ Sbjct 238 DFDAADQLIRAQAPEKAAWGVAFGLTVTLVWLYVEILRLLSYFNND 283 >gi|262201570|ref|YP_003272778.1| hypothetical protein Gbro_1614 [Gordonia bronchialis DSM 43247] gi|262084917|gb|ACY20885.1| protein of unknown function DUF1112 [Gordonia bronchialis DSM 43247] Length=285 Score = 328 bits (841), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 183/296 (62%), Positives = 213/296 (72%), Gaps = 29/296 (9%) Query 1 VRETSNPVFRSLPKQRGGYA-----------------QFGTGTAQQGFPADPYLAPYREA 43 +RE+SNPV R + + QFG TA DPY P Sbjct 1 MRESSNPVMRGVVRDNQTGYAGFGAGMAGAGQGAMMNQFGQQTA------DPYAQP--AP 52 Query 44 KATRPLTIDDVVTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATF 103 ATR LTIDDVVTKT +TL +L +A+V+YFLV N ALAMPL +GA+ GL LVLVA+F Sbjct 53 PATRQLTIDDVVTKTAITLGVLTISAIVTYFLVDQNEALAMPLMALGAIVGLVLVLVASF 112 Query 104 GRKQDNPAIVLSYAALEGLFLGAISFVLANFTVA-SANAGVLIGEAILGTMGVFFGMLVV 162 GRKQDNPAIVL+YA EGLFLGAISFV A F V S +AG LIG+A+LGT GVFFGMLVV Sbjct 113 GRKQDNPAIVLAYAVFEGLFLGAISFVFAEFVVGDSISAGALIGQAVLGTFGVFFGMLVV 172 Query 163 YKTGAIRVTPKFTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVC 222 YK GAIRVTP+FTRM+ A + GV+VLMLGNLV +F+ G LR GP+ IIFSLVC Sbjct 173 YKVGAIRVTPRFTRMLFAGMIGVIVLMLGNLVFGLFSGSAGP---LRDGGPIAIIFSLVC 229 Query 223 IGIAAFSFLIDFDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 I +AAFSFL+DFDAAD++IRAGAP +AAWGVALGLTVTLVWLYIEILRLLSY ++ Sbjct 230 IALAAFSFLLDFDAADRLIRAGAPSRAAWGVALGLTVTLVWLYIEILRLLSYFNSD 285 >gi|226365310|ref|YP_002783093.1| hypothetical protein ROP_59010 [Rhodococcus opacus B4] gi|226243800|dbj|BAH54148.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=287 Score = 328 bits (841), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 184/287 (65%), Positives = 213/287 (75%), Gaps = 12/287 (4%) Query 1 VRETSNPVFRSLPKQRG--GYAQFGTGTA-------QQGFPADPYLAPYREAKATRPLTI 51 VR TSNPVFR+LPKQ G GYA FG+ TA Q G P PYR R +TI Sbjct 4 VRTTSNPVFRNLPKQEGSGGYASFGSTTAGAAQVTQQFGQPQYTQAEPYRTGPDHRSMTI 63 Query 52 DDVVTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPA 111 DDVVTKTG+TL +L +A++SYFLV++N LA PL + G L GL LVLVATFGRK DNP Sbjct 64 DDVVTKTGVTLGVLTVSAIISYFLVSNNANLAAPLVIGGGLVGLVLVLVATFGRKMDNPG 123 Query 112 IVLSYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVT 171 IVL+YA EGLFLGA+SF+ + T LIG+A+LGT GVFFGMLVVYKTGAIRVT Sbjct 124 IVLAYAVAEGLFLGALSFMFTDVTFGGVGGAALIGQAVLGTFGVFFGMLVVYKTGAIRVT 183 Query 172 PKFTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFL 231 P+ TRM++ AL GV+VL LGN++ + F G GLGLR G IIFSLVCIGIAAFSFL Sbjct 184 PRLTRMIIGALIGVVVLALGNVIASFFTPG---GLGLRDGGTFAIIFSLVCIGIAAFSFL 240 Query 232 IDFDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 +DFDAADQ+IRA APEKAAWGVA GLTVTLVWLY+EILRLLSY ++ Sbjct 241 LDFDAADQLIRAQAPEKAAWGVAFGLTVTLVWLYVEILRLLSYFNSD 287 >gi|111022803|ref|YP_705775.1| hypothetical protein RHA1_ro05840 [Rhodococcus jostii RHA1] gi|110822333|gb|ABG97617.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=306 Score = 328 bits (840), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 184/287 (65%), Positives = 214/287 (75%), Gaps = 12/287 (4%) Query 1 VRETSNPVFRSLPKQRG--GYAQFGTGTA-------QQGFPADPYLAPYREAKATRPLTI 51 VR TSNPVFR+LPKQ G GYA FG+ TA Q G P PYR R +TI Sbjct 23 VRTTSNPVFRNLPKQEGSGGYASFGSTTAGAAQVTQQFGQPQYTQAEPYRTGPDYRSMTI 82 Query 52 DDVVTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPA 111 DDVVTKTG+TL +L +A++SYFLV++N LA PL + G L GL LVLVATFGRK DNP Sbjct 83 DDVVTKTGVTLGVLTVSAIISYFLVSNNANLASPLVIGGGLVGLVLVLVATFGRKMDNPG 142 Query 112 IVLSYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVT 171 IVL+YA EGLFLGA+SF+ + T LIG+A+LGT GVFFGMLVVYKTGAIRVT Sbjct 143 IVLAYAVAEGLFLGALSFMFTDITFGGVGGAALIGQAVLGTFGVFFGMLVVYKTGAIRVT 202 Query 172 PKFTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFL 231 P+ TRM++ AL GV+VL LGN++ + F G GLGLR GP+ IIFSLVCIGIAAFSFL Sbjct 203 PRLTRMIIGALIGVVVLALGNVIASFFTEG---GLGLRDGGPVAIIFSLVCIGIAAFSFL 259 Query 232 IDFDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 +DFDAADQ+IRA AP KAAWGVA GLTVTLVWLY+EILRLLSY ++ Sbjct 260 LDFDAADQLIRAQAPAKAAWGVAFGLTVTLVWLYVEILRLLSYFNSD 306 >gi|312138722|ref|YP_004006058.1| integral membrane protein [Rhodococcus equi 103S] gi|311888061|emb|CBH47373.1| putative integral membrane protein [Rhodococcus equi 103S] Length=281 Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 171/284 (61%), Positives = 207/284 (73%), Gaps = 9/284 (3%) Query 1 VRETSNPVFRSLPKQRG-GYAQFGTGTAQQGFPADPYLAPYR-----EAKATRPLTIDDV 54 +R TSNPVF++LPKQ G GYA FG+ A A Y Y + R +TIDDV Sbjct 1 MRTTSNPVFKNLPKQEGTGYATFGSAQAGGAQVAQEYGQQYGAPEQFQQTTQRAMTIDDV 60 Query 55 VTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVL 114 VTKT +TL +L +A+VSYFLV N LA P + G L G LV+VA+FGRK DNPAIVL Sbjct 61 VTKTAITLGVLTISAIVSYFLVDGNTNLAAPFVIGGGLIGFVLVMVASFGRKMDNPAIVL 120 Query 115 SYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKF 174 +YAA EG+FLGA+SF+ + +LIG+A+LGT GVFFGMLVVYKTGAIRVTP+ Sbjct 121 AYAACEGVFLGALSFMFTSVEFGGVGGSMLIGQAVLGTFGVFFGMLVVYKTGAIRVTPRL 180 Query 175 TRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDF 234 TRM++ L GV+VLM+GNL+ + F G G GLR G + I+FSLVCI +AAFSFL+DF Sbjct 181 TRMIIGGLIGVMVLMIGNLIASFFTDG---GFGLRDGGTVAIVFSLVCIALAAFSFLLDF 237 Query 235 DAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 DAAD++IRA APEKAAWGVALGLTVTLVWLY+EILRLLSY N+ Sbjct 238 DAADELIRAQAPEKAAWGVALGLTVTLVWLYVEILRLLSYFNND 281 >gi|343925069|ref|ZP_08764601.1| hypothetical protein GOALK_033_00600 [Gordonia alkanivorans NBRC 16433] gi|343765000|dbj|GAA11527.1| hypothetical protein GOALK_033_00600 [Gordonia alkanivorans NBRC 16433] Length=288 Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 174/293 (60%), Positives = 213/293 (73%), Gaps = 20/293 (6%) Query 1 VRETSNPVFRSLPKQRGGYAQFG--------TGTAQQGFPADPYLAPYREAKATRPLTID 52 +RE+SNPV R + + + G DPY +P + ATR LTID Sbjct 1 MRESSNPVMRGVVRDNQSGYAGFGAGMAGAGVSMNKYGQATDPY-SP-QAPSATRQLTID 58 Query 53 DVVTKTGLTLAMLAGTAVVSYFLVAS------NVALAMPLTLVGALGGLALVLVATFGRK 106 DVVTKT +TL +L A+ +YF ++S +LA+PL +VGA+GGL LVLVATFGRK Sbjct 59 DVVTKTAITLGVLTVVAIATYFGISSRATEAAQTSLALPLMMVGAIGGLVLVLVATFGRK 118 Query 107 QDNPAIVLSYAALEGLFLGAISFVLANFTVA-SANAGVLIGEAILGTMGVFFGMLVVYKT 165 QDNPAIVL+YAA EGLF+G+ISFV AN V +AG LIG+A+LGT GVFFGML VYK Sbjct 119 QDNPAIVLAYAAFEGLFVGSISFVFANLVVGGDISAGALIGQAVLGTFGVFFGMLFVYKI 178 Query 166 GAIRVTPKFTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGI 225 GAIRVTP+FTRM+ A + GVLVLMLGNLV+ +F GE LR GP+ IIFSLVCI + Sbjct 179 GAIRVTPRFTRMLFAGMIGVLVLMLGNLVIGLFT---GEAGILRDGGPIAIIFSLVCIAL 235 Query 226 AAFSFLIDFDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 AAFSFL+DFD+AD++IRAGAP++AAWGVALGLTVTLVWLY+EILRLLSY ++ Sbjct 236 AAFSFLLDFDSADRLIRAGAPDRAAWGVALGLTVTLVWLYVEILRLLSYFNSD 288 >gi|226307757|ref|YP_002767717.1| hypothetical protein RER_42700 [Rhodococcus erythropolis PR4] gi|226186874|dbj|BAH34978.1| conserved hypothetical membrane protein [Rhodococcus erythropolis PR4] Length=286 Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 182/286 (64%), Positives = 209/286 (74%), Gaps = 11/286 (3%) Query 1 VRETSNPVFRSLPKQRG-GYAQFGTGTA-------QQGFPADPYLAPYREAKATRPLTID 52 VR TSNPVFR+LPKQ G GYA FG+ TA Q G P PY+ +R +TID Sbjct 4 VRTTSNPVFRNLPKQEGNGYASFGSATAGASQATQQFGQPQYAPAEPYQTGPTSRAMTID 63 Query 53 DVVTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAI 112 DVVTKTG+TL +L +A+VSYFLV +N LA PL + G L GL LVLVATFGRK DNPAI Sbjct 64 DVVTKTGITLGVLTISALVSYFLVNNNADLAAPLVIGGGLVGLVLVLVATFGRKMDNPAI 123 Query 113 VLSYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTP 172 VL+YA EGLFLGA+SF+ + LI +A+LGT GVFFGMLVVYKTGAIRVTP Sbjct 124 VLAYAVAEGLFLGALSFMFTDIQFGGVGGSALIAQAVLGTFGVFFGMLVVYKTGAIRVTP 183 Query 173 KFTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLI 232 + TRM++ AL GV+VL LGNLV + F GG + L IIFSLVCIGIAAFSFL+ Sbjct 184 RLTRMIIGALIGVVVLALGNLVASFFVDGGLGLRDGGT---LAIIFSLVCIGIAAFSFLL 240 Query 233 DFDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 DFDAADQ+IRA APEKAAWGVA GLTVTLVWLY+EILRLLSY N+ Sbjct 241 DFDAADQLIRAQAPEKAAWGVAFGLTVTLVWLYVEILRLLSYFNND 286 >gi|333921118|ref|YP_004494699.1| major facilitator superfamily permease [Amycolicicoccus subflavus DQS3-9A1] gi|333483339|gb|AEF41899.1| Permease of the major facilitator superfamily protein [Amycolicicoccus subflavus DQS3-9A1] Length=279 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 176/292 (61%), Positives = 208/292 (72%), Gaps = 27/292 (9%) Query 1 VRETSNPVFRSLPKQRGGYA--------------QFGTGTAQQGFPADPYLAPYREAKAT 46 +R +SNPVF++LPK GGYA Q+G TA Q P+ P Sbjct 1 MRTSSNPVFKNLPKGPGGYATFGSGAAGASQAAYQYGQQTAPQYTPSAP----------E 50 Query 47 RPLTIDDVVTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRK 106 R +T+DDVVTKTG TL +L TA++SY+L +N LA L G + GL LVLVA FG+K Sbjct 51 RAMTVDDVVTKTGTTLGVLTVTAILSYYLTNTNPGLAPILVFGGMIVGLVLVLVAVFGKK 110 Query 107 QDNPAIVLSYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTG 166 DNPAIVLSYAA +GLF+G +S++ N V +AG LIG+A+LGT GVFFGMLVVYKTG Sbjct 111 MDNPAIVLSYAAAQGLFVGGLSWLFGNVMVTGISAGALIGQAVLGTFGVFFGMLVVYKTG 170 Query 167 AIRVTPKFTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIA 226 AIRVTP+ TRM+VA +FG LVLM+GNLV + F G G GLR GPL IIFSL IG+A Sbjct 171 AIRVTPRMTRMIVAGIFGALVLMIGNLVASFFMEG---GFGLRDGGPLAIIFSLFVIGLA 227 Query 227 AFSFLIDFDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 AFSFLIDFDAAD+MIR GAPE+AAWGVALGLT+TLVWLYIEILRLLSY E Sbjct 228 AFSFLIDFDAADEMIRQGAPERAAWGVALGLTITLVWLYIEILRLLSYFNQE 279 >gi|296140837|ref|YP_003648080.1| hypothetical protein Tpau_3154 [Tsukamurella paurometabola DSM 20162] gi|296028971|gb|ADG79741.1| protein of unknown function DUF1112 [Tsukamurella paurometabola DSM 20162] Length=299 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 175/302 (58%), Positives = 205/302 (68%), Gaps = 28/302 (9%) Query 1 VRETSNPVFRSLPK---QRGGYAQFG--TGTAQQGFP------------------ADPYL 37 +RE+SNP+ R + + Q G Q G G QQGF P Sbjct 1 MRESSNPILRGMTRGNQQPAGVPQQGYPQGYNQQGFNQAAGFGMGAAGAAQGMQYGQPQ- 59 Query 38 APYREAKATRPLTIDDVVTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLAL 97 APY R +T+DDVVTKT TL +L A SYFLV +N LA PLT+VGA+GGL L Sbjct 60 APYETTTGGRTMTVDDVVTKTAATLGVLIVFAAASYFLVGANPGLATPLTIVGAIGGLVL 119 Query 98 VLVATFGRKQDNPAIVLSYAALEGLFLGAISFVLANFTVASA-NAGVLIGEAILGTMGVF 156 VL+ TFGRK DNPAIVLSYAA EGLF+G+IS+V AN+ +A NAG + +AILGT GVF Sbjct 120 VLIGTFGRKMDNPAIVLSYAAFEGLFVGSISYVFANWVIADGINAGAFLSQAILGTFGVF 179 Query 157 FGMLVVYKTGAIRVTPKFTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGI 216 GMLVVYKTGAIRVTP+FTRM+ L G +VL LGNLV+ +F+ G G LR L I Sbjct 180 IGMLVVYKTGAIRVTPRFTRMMFGMLIGAMVLALGNLVIGLFSGGAGP---LRDGSTLAI 236 Query 217 IFSLVCIGIAAFSFLIDFDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQ 276 IFSLV IGIAAFSFL+DFD ADQ+IRAGAP KAAWGVA GLT+TLVWLY+EILRLLSY Sbjct 237 IFSLVMIGIAAFSFLLDFDQADQLIRAGAPAKAAWGVAFGLTITLVWLYVEILRLLSYFY 296 Query 277 NE 278 + Sbjct 297 SN 298 >gi|54026811|ref|YP_121053.1| hypothetical protein nfa48370 [Nocardia farcinica IFM 10152] gi|54018319|dbj|BAD59689.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=291 Score = 301 bits (771), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 174/294 (60%), Positives = 206/294 (71%), Gaps = 19/294 (6%) Query 1 VRETSNPVFRSLPKQRGG-YAQFGTGTAQQGFPADPY---------------LAPYREAK 44 +R +SNP+F++LPKQ GG YA FG+G A G + Sbjct 1 MRTSSNPIFKNLPKQEGGGYANFGSGVAGAGQFGQQFGHQYPNQYGQYQQQPYQQSAPPT 60 Query 45 ATRPLTIDDVVTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFG 104 TR +TIDDVVTKTG+TL +LA +A+V+Y L ++N LA +VG L GL LVLVATF Sbjct 61 TTRAMTIDDVVTKTGITLGVLAISAIVAYALTSANTGLAPLFVIVGGLVGLVLVLVATFA 120 Query 105 RKQDNPAIVLSYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYK 164 K DNP IVLSYA EGLFLGA+SF+ + + LI +A+LGT GVF GMLVVYK Sbjct 121 NKMDNPVIVLSYAVAEGLFLGALSFMFTDVSFGGVGGSGLIAQAVLGTFGVFAGMLVVYK 180 Query 165 TGAIRVTPKFTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIG 224 TGAIRVTP+FTRM+V A GV+VLMLGNL+ + F G G GLR G L I+FSLVCI Sbjct 181 TGAIRVTPRFTRMIVGATIGVVVLMLGNLIASFFTDG---GFGLRDGGALAIVFSLVCIA 237 Query 225 IAAFSFLIDFDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 IAAFSFL+DFDAADQ+IRA APEKAAWGVALGLTVTLVWLY+EILRLLSY QN+ Sbjct 238 IAAFSFLLDFDAADQLIRAQAPEKAAWGVALGLTVTLVWLYVEILRLLSYFQND 291 >gi|340794907|ref|YP_004760370.1| hypothetical protein CVAR_1944 [Corynebacterium variabile DSM 44702] gi|340534817|gb|AEK37297.1| putative membrane protein [Corynebacterium variabile DSM 44702] Length=291 Score = 296 bits (757), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 161/295 (55%), Positives = 206/295 (70%), Gaps = 24/295 (8%) Query 3 ETSNPVFRSLPK------------QRGGYAQFGTGT------AQQGFPADP-YLAPYREA 43 ++SNP SL K +GGY+Q G AQ G+ P Y P ++A Sbjct 2 KSSNPYMSSLTKATAESQRAQAMAHQGGYSQPGYAQNPYATQAQPGYQQSPNYGVPTKDA 61 Query 44 KATRPLTIDDVVTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATF 103 RP+T+DDVVTKTG+TLA++ A ++ + SN +LAM +T VGA+GG VLV++F Sbjct 62 D--RPMTVDDVVTKTGITLAVIVVFAAITMVIGQSNASLAMGMTFVGAIGGFIAVLVSSF 119 Query 104 GRKQDNPAIVLSYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVY 163 G+K +P + L YA EGLF+G S++L+ V ++AG +I +AILGT+GVF GMLVVY Sbjct 120 GKKYGSPVVTLVYAVFEGLFVGGFSWLLSGMAVGDSDAGAMIFQAILGTVGVFVGMLVVY 179 Query 164 KTGAIRVTPKFTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCI 223 KTGAIRVTPKFT+++++AL GV VL LGNLV ++F+ G G LR GP+ IIFSLVCI Sbjct 180 KTGAIRVTPKFTKIMISALIGVCVLALGNLVFSLFSDGAGP---LRDGGPIAIIFSLVCI 236 Query 224 GIAAFSFLIDFDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 G+AA SFL+DFD ADQ+IRAGAP K AWGVALGL VTLVWLY EILRLLSYL N+ Sbjct 237 GLAAMSFLVDFDQADQLIRAGAPSKMAWGVALGLAVTLVWLYTEILRLLSYLNND 291 >gi|2198497|emb|CAA74135.1| B1306.07 protein [Mycobacterium leprae] Length=220 Score = 288 bits (738), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 154/205 (76%), Positives = 175/205 (86%), Gaps = 7/205 (3%) Query 1 VRETSNPVFRSLPKQRGGYAQFGTGTA--QQGF-PADPYLA-PYREAKA---TRPLTIDD 53 +RETSNPVFRSLPKQRGGYA+FGT A QQG+ DPY A PY+E +A +RPLTIDD Sbjct 1 MRETSNPVFRSLPKQRGGYARFGTDAAPMQQGYYQPDPYAATPYQETRAYQVSRPLTIDD 60 Query 54 VVTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIV 113 VVT+TG+TLA+L +A+VS+FLVASN ALA PLTL G GGLA+VLVATFG KQ++PAIV Sbjct 61 VVTRTGMTLAVLVVSAIVSFFLVASNFALATPLTLAGVFGGLAMVLVATFGGKQNSPAIV 120 Query 114 LSYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPK 173 LSYA LEGLFLGA+SF+ ANF V++ NAGVLIGEA+LGT GVFFGMLVVYKTGAIRVTPK Sbjct 121 LSYAVLEGLFLGAVSFLFANFQVSTVNAGVLIGEAVLGTFGVFFGMLVVYKTGAIRVTPK 180 Query 174 FTRMVVAALFGVLVLMLGNLVLAMF 198 FTRM+VA FGVL LMLGN VLAMF Sbjct 181 FTRMLVAGTFGVLALMLGNFVLAMF 205 >gi|38233519|ref|NP_939286.1| hypothetical protein DIP0923 [Corynebacterium diphtheriae NCTC 13129] gi|38199779|emb|CAE49442.1| Putative membrane protein [Corynebacterium diphtheriae] Length=276 Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 159/281 (57%), Positives = 192/281 (69%), Gaps = 11/281 (3%) Query 3 ETSNPVFRSLPKQRGGYAQFGTGTAQQGFPADPYLAPYREA-----KATRPLTIDDVVTK 57 +SNPV SL R YAQ G QQ F Y ++ A RP+T+DDVVTK Sbjct 2 RSSNPVLNSLTGTRQNYAQ--AGYQQQAFNPMSQYDQYGQSVTSAGAAERPMTVDDVVTK 59 Query 58 TGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYA 117 TG+T+ ++ AVV++ L N LA+ LT VGA+GGL VL++TFGRK + A+ L+YA Sbjct 60 TGITVGVIIAFAVVNFALATVNPGLALILTGVGAIGGLITVLISTFGRKYGSAAVTLTYA 119 Query 118 ALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKFTRM 177 A EGLF+G IS VL+ V NAG LIG+A+LGT+GVF GML VYKTGA++VTPKF R+ Sbjct 120 AFEGLFVGGISLVLSGAMVGGQNAGALIGQAVLGTIGVFLGMLYVYKTGAVKVTPKFNRI 179 Query 178 VVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAA 237 + +L GVLVL LGN+VL F G LGL S GP+ IIFSL CIG+AA SFL DFD A Sbjct 180 LTGSLIGVLVLALGNMVLGFF----GINLGLYSGGPIAIIFSLFCIGLAAMSFLQDFDIA 235 Query 238 DQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 D++IR GAP K AWGVALGL VTLVWLY EILRLLSY Sbjct 236 DRLIRQGAPAKNAWGVALGLAVTLVWLYTEILRLLSYFNQR 276 >gi|213965485|ref|ZP_03393680.1| permease of the major facilitator family protein [Corynebacterium amycolatum SK46] gi|213951869|gb|EEB63256.1| permease of the major facilitator family protein [Corynebacterium amycolatum SK46] Length=275 Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 160/282 (57%), Positives = 201/282 (72%), Gaps = 12/282 (4%) Query 1 VRETSNPVFRSLPKQ----RGGYAQFGTGTAQQGFPADPYLAPYREAKATRPLTIDDVVT 56 +RE+SNP F SL K + G +G G F +PY + + A RP+T+DDVV+ Sbjct 1 MRESSNPAFSSLTKTVARGQAGAQHYGQGQMGADFGDNPYQS--QVAADYRPMTVDDVVS 58 Query 57 KTGLTLAMLAGTAVVSYFLVAS-NVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLS 115 KTG+TLA + A V++F+ S + LAM LT+VGA+GGL +LV+TFG+K + + L+ Sbjct 59 KTGITLATIIVLAAVNFFIAVSVSTQLAMILTIVGAIGGLITILVSTFGKKYGSAPVTLT 118 Query 116 YAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKFT 175 YAA EGLF+G ISF+ + AG LI +A+L T+GVF GML VYK+GAIRVTPKFT Sbjct 119 YAAFEGLFVGGISFMFTA-PIQGVAAGALIMQAVLATLGVFIGMLFVYKSGAIRVTPKFT 177 Query 176 RMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFD 235 R + AAL GVLVLMLGNLVL++F G G LR G L IIFSLVCIG+AAFSFLIDFD Sbjct 178 RFMSAALIGVLVLMLGNLVLSLF----GLGFPLRDGGMLSIIFSLVCIGLAAFSFLIDFD 233 Query 236 AADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQN 277 AD+++RAGAP + AWGVALGL VTLVWLY EILRLLSY ++ Sbjct 234 QADRLVRAGAPAQYAWGVALGLAVTLVWLYTEILRLLSYFRD 275 >gi|305682013|ref|ZP_07404817.1| putative membrane protein [Corynebacterium matruchotii ATCC 14266] gi|305658486|gb|EFM47989.1| putative membrane protein [Corynebacterium matruchotii ATCC 14266] Length=274 Score = 285 bits (729), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 158/285 (56%), Positives = 200/285 (71%), Gaps = 18/285 (6%) Query 1 VRETSNPVFRSLPKQR-----GGYAQFGTGTAQQGFPADPYLAPYREAKATRPLTIDDVV 55 +R ++NPV +SL + R GGY Q Q P Y AP + +A RP+T+DDVV Sbjct 1 MRSSNNPVLKSLSEVRTTNYYGGYQQ------QAHDPYGQYGAPQQPLQAERPMTVDDVV 54 Query 56 TKTGLTLAMLAGTAVVSYFLVA-SNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVL 114 T TG+TL ++ A V++ + A NV L++ LTL+GA+GGL VLV TFG+K + AI L Sbjct 55 TNTGITLGVIIALAAVNFGIAAFVNVKLSLLLTLIGAIGGLVTVLVGTFGKKYGSKAITL 114 Query 115 SYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKF 174 +YAA EGLF+G IS VL+ F V NAG+LIGEAI+GT+GVF GML VYKTGA++VTP+F Sbjct 115 TYAAFEGLFVGGISVVLSGFIVGKQNAGLLIGEAIIGTLGVFLGMLYVYKTGAVKVTPRF 174 Query 175 TRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLG-LRSPGPLGIIFSLVCIGIAAFSFLID 233 R++ AL GVLVLMLGN+V AMF G LR GP+ I FSLVCI +AA SF+ D Sbjct 175 NRIMTGALIGVLVLMLGNMVGAMF-----FGFNPLRDGGPIAIAFSLVCIVLAALSFISD 229 Query 234 FDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 FD A+Q+IR GAP + +WGVA+GL VTLVWLY EILRLLSY Q+ Sbjct 230 FDVAEQLIREGAPARYSWGVAMGLAVTLVWLYTEILRLLSYFQSR 274 >gi|225022979|ref|ZP_03712171.1| hypothetical protein CORMATOL_03025 [Corynebacterium matruchotii ATCC 33806] gi|224944202|gb|EEG25411.1| hypothetical protein CORMATOL_03025 [Corynebacterium matruchotii ATCC 33806] Length=274 Score = 284 bits (726), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 157/285 (56%), Positives = 200/285 (71%), Gaps = 18/285 (6%) Query 1 VRETSNPVFRSLPKQR-----GGYAQFGTGTAQQGFPADPYLAPYREAKATRPLTIDDVV 55 +R ++NPV +SL + R GGY Q Q P Y AP + +A RP+T+DDVV Sbjct 1 MRSSNNPVLKSLSEVRTTNYYGGYQQ------QAHDPYGQYGAPQQPLQAERPMTVDDVV 54 Query 56 TKTGLTLAMLAGTAVVSYFLVA-SNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVL 114 T TG+TL ++ A +++ + A NV L++ LTL+GA+GGL VLV TFG+K + AI L Sbjct 55 TNTGITLGVIIALAAMNFGIAAFVNVKLSLLLTLIGAIGGLVTVLVGTFGKKYGSKAITL 114 Query 115 SYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKF 174 +YAA EGLF+G IS VL+ F V NAG+LIGEAI+GT+GVF GML VYKTGA++VTP+F Sbjct 115 TYAAFEGLFVGGISVVLSGFIVGKQNAGLLIGEAIIGTLGVFLGMLYVYKTGAVKVTPRF 174 Query 175 TRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLG-LRSPGPLGIIFSLVCIGIAAFSFLID 233 R++ AL GVLVLMLGN+V AMF G LR GP+ I FSLVCI +AA SF+ D Sbjct 175 NRIMTGALIGVLVLMLGNMVGAMF-----FGFNPLRDGGPIAIAFSLVCIVLAALSFISD 229 Query 234 FDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 FD A+Q+IR GAP + +WGVA+GL VTLVWLY EILRLLSY Q+ Sbjct 230 FDVAEQLIREGAPARYSWGVAMGLAVTLVWLYTEILRLLSYFQSR 274 >gi|317508379|ref|ZP_07966052.1| hypothetical protein HMPREF9336_02424 [Segniliparus rugosus ATCC BAA-974] gi|316253336|gb|EFV12733.1| hypothetical protein HMPREF9336_02424 [Segniliparus rugosus ATCC BAA-974] Length=273 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 158/279 (57%), Positives = 200/279 (72%), Gaps = 8/279 (2%) Query 1 VRETSNPVFRSLPKQRGGYAQFGTGTAQQGFPADPYLAPYREAKATRPLTIDDVVTKTGL 60 +R++SNPVFRSL + PY Y+ ATR L++DDVV KT Sbjct 1 MRQSSNPVFRSLTRLGAQGGAQAGAYQYG-QQQAPYNYQYQAPSATRTLSVDDVVAKTAT 59 Query 61 TLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYAALE 120 + +L TAV+SYFL S+ AL + ++ L GL LVL ATFGR+QDNPA+VLSY+ E Sbjct 60 SFGVLTITAVLSYFLTISSPALGGAIAMISGLVGLGLVLFATFGRQQDNPAVVLSYSVAE 119 Query 121 GLFLGAISFVL-ANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKFTRMVV 179 GLF+GA++ V A F V NAG+LI EA++GT GVF GML VYK GA+RVTP+ TR+VV Sbjct 120 GLFVGALTHVFTAPFGV---NAGLLITEALIGTFGVFAGMLAVYKMGAVRVTPRSTRIVV 176 Query 180 AALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAADQ 239 +FGVL L++ NL+ + F GG LGLRS GPL IIFSLVCIG+AA++FL+DFD+ADQ Sbjct 177 GLMFGVLGLIVVNLIASFFIPGG---LGLRSGGPLAIIFSLVCIGLAAYNFLMDFDSADQ 233 Query 240 MIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 +IRAGAP+KAAWG+ALGLT+T+VWLYIEILRLL YL + Sbjct 234 LIRAGAPQKAAWGIALGLTITVVWLYIEILRLLGYLNSS 272 >gi|296394386|ref|YP_003659270.1| hypothetical protein Srot_1982 [Segniliparus rotundus DSM 44985] gi|296181533|gb|ADG98439.1| protein of unknown function DUF1112 [Segniliparus rotundus DSM 44985] Length=276 Score = 278 bits (712), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 154/280 (55%), Positives = 195/280 (70%), Gaps = 7/280 (2%) Query 1 VRETSNPVFRSL--PKQRGGYAQFGTGTAQQGFPADPYLAPYREAKATRPLTIDDVVTKT 58 +R++SNPVFRSL P + G Q+G + + P Y+ A+R L++DDVV KT Sbjct 1 MRQSSNPVFRSLSRPGAQAGAYQYGQ-QSHAVYQQAPLNYQYQAPAASRTLSVDDVVAKT 59 Query 59 GLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYAA 118 +LA+LA TAV SY L AL P+ ++ L GL LVL ATFGR+QDNPA+VL Y+ Sbjct 60 ATSLAVLAVTAVASYVLTLQTPALGGPIAMIAGLVGLGLVLFATFGRQQDNPAVVLGYSV 119 Query 119 LEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKFTRMV 178 +EGLF+GA++ L AG LIG A++GT GVF GML VYKTGA+RVTP+ TR+ Sbjct 120 VEGLFVGAVTNAL-TLQFQGVEAGKLIGMALVGTFGVFAGMLGVYKTGAVRVTPRSTRIA 178 Query 179 VAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAAD 238 +FGV+ L L N + + F GG LGL S GP+ IIFSL+CIG+AA+SFLIDFD AD Sbjct 179 TGLIFGVVALGLVNFIASFFTPGG---LGLYSHGPIAIIFSLLCIGLAAYSFLIDFDQAD 235 Query 239 QMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 Q+IRAGAP+KAAWGVALGLTVT+VWLY+EILRLL L + Sbjct 236 QLIRAGAPQKAAWGVALGLTVTIVWLYLEILRLLVNLNSS 275 >gi|259506994|ref|ZP_05749894.1| integral membrane protein [Corynebacterium efficiens YS-314] gi|259165446|gb|EEW50000.1| integral membrane protein [Corynebacterium efficiens YS-314] Length=272 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 154/284 (55%), Positives = 193/284 (68%), Gaps = 21/284 (7%) Query 3 ETSNPVFRSLPK-QRG-------GYAQFGTGTAQQGFPADPYLAPYREAKATRPLTIDDV 54 +SNPVF SL QR GY QFG Q Y AP + RP+T+DDV Sbjct 2 RSSNPVFSSLTDTQRSHGQNSYAGYDQFGGQYQTQ------YNAP---QQTERPMTVDDV 52 Query 55 VTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVL 114 +TKTG+TLA++ AV+++ + N +AM LT++GA+GG VLVATFG+K + + + Sbjct 53 ITKTGITLAIIVAFAVLTFGVSLVNPGMAMILTIIGAIGGFITVLVATFGKKYGSAPVTI 112 Query 115 SYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKF 174 YAA EGLF+G IS + + F AG LIG+A+LGT+GVFFGML VYKTGAI+VTPKF Sbjct 113 IYAAFEGLFVGGISLLFSGFLQGYDGAGALIGQAVLGTIGVFFGMLFVYKTGAIKVTPKF 172 Query 175 TRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDF 234 R++ +FGVLVL+LGNL +++F G G LR G L I+FSL CIG+AAFSFL DF Sbjct 173 NRIMTGMIFGVLVLVLGNLAMSLF----GFGSPLRDGGILAIVFSLFCIGLAAFSFLTDF 228 Query 235 DAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 DAAD+M+R G P + AWGVALGL VTLVWLY EILRLLSY N Sbjct 229 DAADKMVREGVPARMAWGVALGLAVTLVWLYTEILRLLSYFTNR 272 >gi|68536558|ref|YP_251263.1| hypothetical protein jk1472 [Corynebacterium jeikeium K411] gi|260577701|ref|ZP_05845636.1| permease of the major facilitator family protein [Corynebacterium jeikeium ATCC 43734] gi|68264157|emb|CAI37645.1| putative membrane protein [Corynebacterium jeikeium K411] gi|258604096|gb|EEW17338.1| permease of the major facilitator family protein [Corynebacterium jeikeium ATCC 43734] Length=301 Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 154/303 (51%), Positives = 195/303 (65%), Gaps = 31/303 (10%) Query 3 ETSNPVFRSLPKQRGGY----------------------------AQFGTGTAQQGFPAD 34 ++SNP SL K +G + A G TA G+ Sbjct 2 KSSNPFMGSLAKNQGQHPFAQQGNQGGYGQQGGYGQQGMNPYATSAHGGVQTAAMGYGMQ 61 Query 35 PYLAPYREAKATRPLTIDDVVTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGG 94 + A RP+T+DDVVTKTG+TLA++ AVV++ + S +AM LT VG +GG Sbjct 62 DAANYGQAGSADRPMTVDDVVTKTGITLAVIIALAVVNFIIGLSYSGIAMGLTFVGMIGG 121 Query 95 LALVLVATFGRKQDNPAIVLSYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMG 154 L VLV+ FG+K D+ + L+YAA EGLF+G +F+++ V +AG+LI +A+LGT+G Sbjct 122 LIAVLVSAFGKKYDSAPVTLTYAAFEGLFVGGFTFLVSGAAVGDTDAGMLIAQAVLGTIG 181 Query 155 VFFGMLVVYKTGAIRVTPKFTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPL 214 VF GML VYKTGAIRVTPKFTR +VAA+ G LVL LGNLV A+ G LR GP+ Sbjct 182 VFIGMLFVYKTGAIRVTPKFTRFLVAAMIGTLVLALGNLVFALVT---GSAGALRDGGPI 238 Query 215 GIIFSLVCIGIAAFSFLIDFDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSY 274 IIFSLVCIGIAA SFL+DFD AD+++RAGAP K AWGVALGL VTLVWLY EILRLLSY Sbjct 239 AIIFSLVCIGIAAMSFLLDFDQADRLVRAGAPSKMAWGVALGLAVTLVWLYTEILRLLSY 298 Query 275 LQN 277 ++ Sbjct 299 FRD 301 >gi|336326160|ref|YP_004606126.1| hypothetical protein CRES_1609 [Corynebacterium resistens DSM 45100] gi|336102142|gb|AEI09962.1| putative membrane protein [Corynebacterium resistens DSM 45100] Length=306 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 144/267 (54%), Positives = 183/267 (69%), Gaps = 4/267 (1%) Query 13 PKQRGGYAQFGTGTAQQGFPADPYLAPYREAKAT-RPLTIDDVVTKTGLTLAMLAGTAVV 71 P Y T T QG + + A A+ RP+T+DDVV KT +TL ++ AV Sbjct 43 PYATSAYGATQTATVHQGMENMQHAPNFGAAGASDRPMTVDDVVAKTSITLGVIIAFAVA 102 Query 72 SYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYAALEGLFLGAISFVL 131 YFL +S+ ALAMPL +G +GG VL++ F + + A+ L YA EGLF+G S+++ Sbjct 103 EYFLFSSDSALAMPLFFLGLIGGFITVLISAFTKNYGSAAVTLIYAGFEGLFVGGFSWMV 162 Query 132 ANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKFTRMVVAALFGVLVLMLG 191 AN + + NAG LI +AILGT+GVF GML VYK+GAIRVTPKFTR +V A+ GVLVL LG Sbjct 163 ANISASGINAGALISQAILGTIGVFIGMLFVYKSGAIRVTPKFTRFMVGAMIGVLVLALG 222 Query 192 NLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAADQMIRAGAPEKAAW 251 NLV + + G G LR GP+ IFSLVCIG+AA SF++DFD AD++IR+GAP K AW Sbjct 223 NLVFGLVSGGAGP---LRDGGPIAWIFSLVCIGLAAMSFMLDFDQADRLIRSGAPSKMAW 279 Query 252 GVALGLTVTLVWLYIEILRLLSYLQNE 278 GVALGL VTLVWLY EILR+LSYLQ + Sbjct 280 GVALGLAVTLVWLYTEILRMLSYLQGD 306 >gi|319949705|ref|ZP_08023736.1| hypothetical protein ES5_09555 [Dietzia cinnamea P4] gi|319436635|gb|EFV91724.1| hypothetical protein ES5_09555 [Dietzia cinnamea P4] Length=293 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 168/304 (56%), Positives = 207/304 (69%), Gaps = 38/304 (12%) Query 1 VRETSNPVFRSLPK-----------------QRGGYAQFGTGTAQQGFPADP-------Y 36 +R +SNPVF SL Q+G Y Q G G AQ G+ A Y Sbjct 1 MRSSSNPVFSSLSTDSARGATQFGAAGRGAFQQGQYGQPGYG-AQAGYGAPAGYGAQAGY 59 Query 37 LAPYREAKATRPLTIDDVVTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLA 96 AP + A TRP+TIDDVV KTG+TL ++ +++YFL + ++ LAMPL LVG +GGL Sbjct 60 GAP-QAAADTRPMTIDDVVAKTGITLGVIGVVGLIAYFL-SVDMGLAMPLLLVGGIGGLI 117 Query 97 LVLVATFGRKQDNPAIVLSYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVF 156 VLVATFGRK D+ + L+YAA EGLF+GA+S + F +A A+A +IG+AILGT GVF Sbjct 118 TVLVATFGRKMDSAPVTLTYAAFEGLFIGAVSHIF-TFNIAGADAAAVIGQAILGTFGVF 176 Query 157 FGMLVVYKTGAIRVTPKFTRMVVAALFGVLVLMLGNLVLAM---FNVGGGEGLGLRSPGP 213 GML VYKTGA+RVTPKFTR + AAL GVLVLM+GNL A+ FN LR G Sbjct 177 AGMLFVYKTGAVRVTPKFTRFMTAALIGVLVLMVGNLFGALLFGFNP-------LRDGGV 229 Query 214 LGIIFSLVCIGIAAFSFLIDFDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLS 273 + IIFSLVCIG+AAFSFL+DFD AD+++RAGAP K AWGVALGL VTLVWLY+EILRL+S Sbjct 230 MAIIFSLVCIGLAAFSFLLDFDNADRLVRAGAPAKMAWGVALGLAVTLVWLYVEILRLMS 289 Query 274 YLQN 277 Y + Sbjct 290 YFRE 293 >gi|237785170|ref|YP_002905875.1| hypothetical protein ckrop_0561 [Corynebacterium kroppenstedtii DSM 44385] gi|237758082|gb|ACR17332.1| putative membrane protein [Corynebacterium kroppenstedtii DSM 44385] Length=293 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 152/292 (53%), Positives = 193/292 (67%), Gaps = 24/292 (8%) Query 3 ETSNPVFRSLPKQRGGYAQFGTGTAQQGFPADPYLAPYREAK------------------ 44 +SNP F SL ++R A+ G G D R A Sbjct 2 RSSNPYFSSLTEERKREARSSQGEYVFGQGQDAQQFGQRGASMAGAQQFGQQTMQQQAQG 61 Query 45 --ATRPLTIDDVVTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVAT 102 A R +TIDDV+ KT +TL ++ AV++Y L SN ++ LT+VGA+GGL +V+V+T Sbjct 62 TTAERGMTIDDVIVKTSITLGVIIVGAVINYMLSLSNPQVSSLLTMVGAIGGLIMVMVST 121 Query 103 FGRKQDNPAIVLSYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVV 162 FG+K +P + L YAA EGLF+G ++ V AN V+ ANAG +IG+A+LGT+GVF GML+V Sbjct 122 FGKKFGSPVVTLLYAAFEGLFVGGLTSVFANVMVSGANAGTIIGQAVLGTIGVFIGMLIV 181 Query 163 YKTGAIRVTPKFTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVC 222 Y+TGAIRVTPKF R+++ AL GVLVL LGN++LA+F G L GPL I FSL+C Sbjct 182 YRTGAIRVTPKFNRIMLGALVGVLVLALGNMLLAVFT---GHN-PLTDGGPLAIGFSLLC 237 Query 223 IGIAAFSFLIDFDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSY 274 IG+AA SFL DFD ADQ++RAGAP K AWGVALGL VTLVWLY EILRLLSY Sbjct 238 IGLAALSFLQDFDTADQLVRAGAPSKMAWGVALGLAVTLVWLYTEILRLLSY 289 >gi|172040276|ref|YP_001799990.1| hypothetical protein cur_0596 [Corynebacterium urealyticum DSM 7109] gi|171851580|emb|CAQ04556.1| putative membrane protein [Corynebacterium urealyticum DSM 7109] Length=303 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 145/256 (57%), Positives = 180/256 (71%), Gaps = 7/256 (2%) Query 24 TGTAQQGFPADPYLAPYREA-KATRPLTIDDVVTKTGLTLAMLAGTAVVSYFLVASNVAL 82 T T Q G A Y +A A RP+T+DDVV KTG+TLA++ A +YF+ +N A Sbjct 54 TATYQDGLQDA---ANYGQAGPADRPITVDDVVAKTGITLAVIVVLAAANYFIFGTNPAT 110 Query 83 AMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYAALEGLFLGAISFVLANFTVASANAG 142 LT+VGA+GGL VLV+ F +K +P + L YA EGLF+G S++L V NAG Sbjct 111 GSILTVVGAIGGLITVLVSAFAKKYGSPVVTLLYAGFEGLFVGGFSYMLTGMAVGDTNAG 170 Query 143 VLIGEAILGTMGVFFGMLVVYKTGAIRVTPKFTRMVVAALFGVLVLMLGNLVLAMFNVGG 202 +I +AILGT+GVF GML VYKTGAIRVTPKFT+ +VAAL GVLVL LG++++ +F G Sbjct 171 AMISQAILGTIGVFAGMLFVYKTGAIRVTPKFTKFMVAALIGVLVLALGSMLIGLFTGGA 230 Query 203 GEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAADQMIRAGAPEKAAWGVALGLTVTLV 262 G LR PL IFSL+CIG+AA SFL DFDAAD+++RAGAP K AWGVALGL VTLV Sbjct 231 GP---LRDGSPLSWIFSLLCIGLAALSFLQDFDAADRLVRAGAPSKMAWGVALGLAVTLV 287 Query 263 WLYIEILRLLSYLQNE 278 WLY EILRLLSY+ + Sbjct 288 WLYTEILRLLSYINRD 303 >gi|19552209|ref|NP_600211.1| hypothetical protein NCgl0944 [Corynebacterium glutamicum ATCC 13032] gi|62389874|ref|YP_225276.1| major facilitator superfamily permease [Corynebacterium glutamicum ATCC 13032] gi|41325209|emb|CAF19690.1| Permease of the major facilitator superfamily [Corynebacterium glutamicum ATCC 13032] Length=286 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 163/284 (58%), Positives = 201/284 (71%), Gaps = 21/284 (7%) Query 3 ETSNPVFRSLPK-QR-------GGYAQFGTGTAQQGFPADPYLAPYREAKATRPLTIDDV 54 +SNPVF SL + QR GGY FG G QQ +AP KA RP+T+DDV Sbjct 16 RSSNPVFSSLKETQRPQGQNPYGGYDNFG-GVYQQN------VAP---QKAERPMTVDDV 65 Query 55 VTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVL 114 +TKTG+TLA++ A+V++ + + L M LTLVGA+GG VLV+TFG+K + A+ L Sbjct 66 ITKTGITLAVIIVFALVTFGVWLVSPGLGMILTLVGAIGGFITVLVSTFGKKYGSAAVTL 125 Query 115 SYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKF 174 YA EGLF+G IS +L+ FTV +ANAG LIG+A+LGT+GVF GML VYKTGAI+VTPKF Sbjct 126 IYAVFEGLFVGGISLLLSGFTVGNANAGGLIGQAVLGTIGVFIGMLFVYKTGAIKVTPKF 185 Query 175 TRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDF 234 R++ + GVLVL+LGN+V A+F G LR G + IIFSL CIG+AAFSFL DF Sbjct 186 NRILTGMMVGVLVLVLGNVVWALFTGGASP---LRDGGIIAIIFSLFCIGLAAFSFLSDF 242 Query 235 DAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 DAAD+++R GAP K AWGVALGL VTLVWLY EILRLLSY QN Sbjct 243 DAADRLVREGAPSKMAWGVALGLAVTLVWLYTEILRLLSYFQNR 286 >gi|145295134|ref|YP_001137955.1| hypothetical protein cgR_1077 [Corynebacterium glutamicum R] gi|21323750|dbj|BAB98376.1| Hypothetical membrane protein [Corynebacterium glutamicum ATCC 13032] gi|140845054|dbj|BAF54053.1| hypothetical protein [Corynebacterium glutamicum R] Length=272 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 163/284 (58%), Positives = 201/284 (71%), Gaps = 21/284 (7%) Query 3 ETSNPVFRSLPK-QR-------GGYAQFGTGTAQQGFPADPYLAPYREAKATRPLTIDDV 54 +SNPVF SL + QR GGY FG G QQ +AP KA RP+T+DDV Sbjct 2 RSSNPVFSSLKETQRPQGQNPYGGYDNFG-GVYQQN------VAP---QKAERPMTVDDV 51 Query 55 VTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVL 114 +TKTG+TLA++ A+V++ + + L M LTLVGA+GG VLV+TFG+K + A+ L Sbjct 52 ITKTGITLAVIIVFALVTFGVWLVSPGLGMILTLVGAIGGFITVLVSTFGKKYGSAAVTL 111 Query 115 SYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKF 174 YA EGLF+G IS +L+ FTV +ANAG LIG+A+LGT+GVF GML VYKTGAI+VTPKF Sbjct 112 IYAVFEGLFVGGISLLLSGFTVGNANAGGLIGQAVLGTIGVFIGMLFVYKTGAIKVTPKF 171 Query 175 TRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDF 234 R++ + GVLVL+LGN+V A+F G LR G + IIFSL CIG+AAFSFL DF Sbjct 172 NRILTGMMVGVLVLVLGNVVWALFTGGASP---LRDGGIIAIIFSLFCIGLAAFSFLSDF 228 Query 235 DAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 DAAD+++R GAP K AWGVALGL VTLVWLY EILRLLSY QN Sbjct 229 DAADRLVREGAPSKMAWGVALGLAVTLVWLYTEILRLLSYFQNR 272 >gi|344044405|gb|EGV40082.1| major facilitator superfamily permease [Corynebacterium glutamicum S9114] Length=272 Score = 261 bits (668), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 160/284 (57%), Positives = 201/284 (71%), Gaps = 21/284 (7%) Query 3 ETSNPVFRSLPK-QR-------GGYAQFGTGTAQQGFPADPYLAPYREAKATRPLTIDDV 54 +SNPVF SL + QR GGY FG G QQ A P KA RP+T+DDV Sbjct 2 RSSNPVFSSLKETQRPQGQNPYGGYDNFG-GVYQQN--AAP-------QKAERPMTVDDV 51 Query 55 VTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVL 114 +TKTG+TLA++ A+++ + ++ L M LTLVGA+GG VL++TFG+K + A+ L Sbjct 52 ITKTGITLAVIVVFALINVGVWLASSGLGMILTLVGAIGGFITVLISTFGKKYGSAAVTL 111 Query 115 SYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKF 174 YAA EGLF+G IS +L+ FTV +++AG LIG+A+LGT+GVF GML VYKTGAI+VTPKF Sbjct 112 IYAAFEGLFVGGISLLLSGFTVGNSDAGALIGQAVLGTVGVFIGMLFVYKTGAIKVTPKF 171 Query 175 TRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDF 234 R++ + GVLVL+LGN+V A+F G LR G + IIFSL CIG+AAFSFL DF Sbjct 172 NRILTGMMVGVLVLVLGNVVWALFTGGASP---LRDGGIIAIIFSLFCIGLAAFSFLSDF 228 Query 235 DAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 DAAD+++R GAP K AWGVALGL VTLVWLY EILRLLSY QN Sbjct 229 DAADRLVREGAPSKMAWGVALGLAVTLVWLYTEILRLLSYFQNR 272 >gi|25027604|ref|NP_737658.1| hypothetical protein CE1048 [Corynebacterium efficiens YS-314] gi|23492886|dbj|BAC17858.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length=226 Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 134/230 (59%), Positives = 171/230 (75%), Gaps = 4/230 (1%) Query 49 LTIDDVVTKTGLTLAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQD 108 +T+DDV+TKTG+TLA++ AV+++ + N +AM LT++GA+GG VLVATFG+K Sbjct 1 MTVDDVITKTGITLAIIVAFAVLTFGVSLVNPGMAMILTIIGAIGGFITVLVATFGKKYG 60 Query 109 NPAIVLSYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAI 168 + + + YAA EGLF+G IS + + F AG LIG+A+LGT+GVFFGML VYKTGAI Sbjct 61 SAPVTIIYAAFEGLFVGGISLLFSGFLQGYDGAGALIGQAVLGTIGVFFGMLFVYKTGAI 120 Query 169 RVTPKFTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAF 228 +VTPKF R++ +FGVLVL+LGNL +++F G G LR G L I+FSL CIG+AAF Sbjct 121 KVTPKFNRIMTGMIFGVLVLVLGNLAMSLF----GFGSPLRDGGILAIVFSLFCIGLAAF 176 Query 229 SFLIDFDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 SFL DFDAAD+M+R G P + AWGVALGL VTLVWLY EILRLLSY N Sbjct 177 SFLTDFDAADKMVREGVPARMAWGVALGLAVTLVWLYTEILRLLSYFTNR 226 >gi|337290389|ref|YP_004629410.1| hypothetical protein CULC22_00778 [Corynebacterium ulcerans BR-AD22] gi|334696502|gb|AEG81299.1| putative membrane protein [Corynebacterium ulcerans 809] gi|334698695|gb|AEG83491.1| putative membrane protein [Corynebacterium ulcerans BR-AD22] Length=273 Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 150/277 (55%), Positives = 192/277 (70%), Gaps = 6/277 (2%) Query 3 ETSNPVFRSLPKQRGGYAQFGTGTAQQGFPADPYLAPYREAKAT-RPLTIDDVVTKTGLT 61 +SNPV SL R Q G Q P Y + + RP+T+DDVV+KTG+T Sbjct 2 RSSNPVLNSLTGSRQRQTQAGY-QQQIDNPYGGYGYNQLDPQVNDRPMTVDDVVSKTGIT 60 Query 62 LAMLAGTAVVSYFLVASNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYAALEG 121 L ++ A++++ + N +A+ LT VGA+GGL VL+++FGRK + I L+YAA EG Sbjct 61 LGVIIAFAILNFGIAQVNSGIALMLTGVGAIGGLITVLISSFGRKFGSAPITLTYAAFEG 120 Query 122 LFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKFTRMVVAA 181 LF+G IS VL+ + V NAG LIG+A+LGT+GVF GML VYKTGA++VTPKF R++ + Sbjct 121 LFVGGISLVLSGWLVGGQNAGTLIGQAVLGTVGVFLGMLYVYKTGAVKVTPKFNRILTSC 180 Query 182 LFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAADQMI 241 + GVLVL++GNLVL++F V LGL S GP+ IIFSLVCIG+AA SFL DFD AD++I Sbjct 181 IIGVLVLVVGNLVLSLFGV----NLGLYSGGPIAIIFSLVCIGLAAMSFLQDFDIADRLI 236 Query 242 RAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE 278 R GAP K AWGVALGL VTLVWLY EILRLLSY Sbjct 237 RQGAPSKNAWGVALGLAVTLVWLYTEILRLLSYFNQR 273 >gi|300781604|ref|ZP_07091458.1| transmembrane protein [Corynebacterium genitalium ATCC 33030] gi|300533311|gb|EFK54372.1| transmembrane protein [Corynebacterium genitalium ATCC 33030] Length=300 Score = 251 bits (642), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 146/304 (49%), Positives = 198/304 (66%), Gaps = 33/304 (10%) Query 3 ETSNPVFRSLPK--QRGGYAQFGTGTA-----------QQGFPADPYLA----------- 38 ++SNPV LP+ Q+ G+ Q G QQG DPY A Sbjct 2 KSSNPVMARLPQSAQQAGFGQPQGGHGYNPQGGSYGYDQQGGYQDPYGASQNPYGQAGYA 61 Query 39 --PYREAKATRPLTIDDVVTKTGLTLAMLAGTAVVSYFL-VASNVALAMPLTLVGALGGL 95 PY A RP+T+DD+VTKTG+TLA++ A++++ + +A + +++M LT VGA+GGL Sbjct 62 QDPYAGATGERPITVDDIVTKTGITLAVIVAFALINFGIGIAVDPSISMILTFVGAIGGL 121 Query 96 ALVLVATFGRKQDNPAIVLSYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGV 155 VL+ +FG K + A+ L YAA EGLF+G S ++ + + +A+AG L+ +A+LGT+GV Sbjct 122 ITVLIHSFGGKYGSAAVTLIYAAFEGLFVGGFSMAVSGWMLGNADAGTLVFQAVLGTVGV 181 Query 156 FFGMLVVYKTGAIRVTPKFTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLG-LRSPGPL 214 F GML VYK GAIRVTPKFTR++ + GV VL +GNL++ +F G+ LR GPL Sbjct 182 FAGMLFVYKVGAIRVTPKFTRILTGCIIGVAVLAVGNLLMFIFT-----GMSPLRDGGPL 236 Query 215 GIIFSLVCIGIAAFSFLIDFDAADQMIRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSY 274 I FSLVCI +A+ SFL+DFD AD+++R GAP K AWGVALGL VTLVWLY EILRLLS Sbjct 237 AIGFSLVCIVLASLSFLVDFDTADKLVRMGAPAKMAWGVALGLAVTLVWLYTEILRLLSI 296 Query 275 LQNE 278 L + Sbjct 297 LSRD 300 Lambda K H 0.325 0.141 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 441811207902 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40