BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1073

Length=283
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15840508|ref|NP_335545.1|  hypothetical protein MT1103 [Mycoba...   574    5e-162
gi|15608213|ref|NP_215589.1|  hypothetical protein Rv1073 [Mycoba...   573    8e-162
gi|308231722|ref|ZP_07413558.2|  hypothetical protein TMAG_03890 ...   572    2e-161
gi|289744813|ref|ZP_06504191.1|  conserved hypothetical protein [...   572    2e-161
gi|340626084|ref|YP_004744536.1|  hypothetical protein MCAN_10791...   572    3e-161
gi|294992914|ref|ZP_06798605.1|  hypothetical protein Mtub2_00005...   427    1e-117
gi|333992760|ref|YP_004525374.1|  hypothetical protein JDM601_412...   352    4e-95 
gi|108801117|ref|YP_641314.1|  hypothetical protein Mmcs_4153 [My...   344    9e-93 
gi|126436955|ref|YP_001072646.1|  hypothetical protein Mjls_4384 ...   344    9e-93 
gi|328459637|gb|AEB05060.1|  conserved hypothetical protein [Myco...   321    1e-85 
gi|253799891|ref|YP_003032892.1|  hypothetical protein TBMG_02914...   320    1e-85 
gi|296167867|ref|ZP_06850050.1|  conserved hypothetical protein [...   291    6e-77 
gi|240172475|ref|ZP_04751134.1|  hypothetical protein MkanA1_2438...   290    2e-76 
gi|342859111|ref|ZP_08715765.1|  hypothetical protein MCOL_09543 ...   288    5e-76 
gi|183980735|ref|YP_001849026.1|  hypothetical protein MMAR_0712 ...   286    2e-75 
gi|108801239|ref|YP_641436.1|  hypothetical protein Mmcs_4275 [My...   284    1e-74 
gi|240168874|ref|ZP_04747533.1|  hypothetical protein MkanA1_0615...   283    2e-74 
gi|118618245|ref|YP_906577.1|  hypothetical protein MUL_2811 [Myc...   283    2e-74 
gi|126437219|ref|YP_001072910.1|  hypothetical protein Mjls_4654 ...   278    5e-73 
gi|254818869|ref|ZP_05223870.1|  hypothetical protein MintA_03034...   276    3e-72 
gi|240173343|ref|ZP_04752001.1|  hypothetical protein MkanA1_2878...   274    9e-72 
gi|336460367|gb|EGO39267.1|  hypothetical protein MAPs_41650 [Myc...   273    3e-71 
gi|41409990|ref|NP_962826.1|  hypothetical protein MAP3892 [Mycob...   273    3e-71 
gi|118463624|ref|YP_883880.1|  hypothetical protein MAV_4752 [Myc...   272    4e-71 
gi|118468415|ref|YP_885190.1|  hypothetical protein MSMEG_0785 [M...   270    3e-70 
gi|41408893|ref|NP_961729.1|  hypothetical protein MAP2795 [Mycob...   263    2e-68 
gi|289445109|ref|ZP_06434853.1|  conserved hypothetical protein [...   263    2e-68 
gi|15610653|ref|NP_218034.1|  hypothetical protein Rv3517 [Mycoba...   263    2e-68 
gi|254776009|ref|ZP_05217525.1|  hypothetical protein MaviaA2_152...   263    3e-68 
gi|296166568|ref|ZP_06848998.1|  conserved hypothetical protein [...   262    4e-68 
gi|289755646|ref|ZP_06515024.1|  conserved hypothetical protein [...   260    2e-67 
gi|336458826|gb|EGO37783.1|  hypothetical protein MAPs_08850 [Myc...   260    2e-67 
gi|183980406|ref|YP_001848697.1|  hypothetical protein MMAR_0375 ...   257    2e-66 
gi|15843335|ref|NP_338372.1|  hypothetical protein MT3817 [Mycoba...   253    2e-65 
gi|15610850|ref|NP_218231.1|  hypothetical protein Rv3714c [Mycob...   253    2e-65 
gi|308406227|ref|ZP_07495622.2|  hypothetical protein TMLG_00204 ...   253    2e-65 
gi|308232545|ref|ZP_07416408.2|  hypothetical protein TMAG_00205 ...   253    2e-65 
gi|340628688|ref|YP_004747140.1|  hypothetical protein MCAN_37361...   253    3e-65 
gi|308374960|ref|ZP_07442226.2|  hypothetical protein TMGG_01257 ...   252    4e-65 
gi|254773599|ref|ZP_05215115.1|  hypothetical protein MaviaA2_028...   251    8e-65 
gi|126437575|ref|YP_001073266.1|  hypothetical protein Mjls_5011 ...   251    9e-65 
gi|339296524|gb|AEJ48635.1|  hypothetical protein CCDC5079_3446 [...   251    1e-64 
gi|289571958|ref|ZP_06452185.1|  conserved hypothetical protein [...   251    1e-64 
gi|118463860|ref|YP_879922.1|  hypothetical protein MAV_0642 [Myc...   251    1e-64 
gi|289763695|ref|ZP_06523073.1|  conserved hypothetical protein [...   250    2e-64 
gi|118619802|ref|YP_908134.1|  hypothetical protein MUL_4737 [Myc...   249    2e-64 
gi|120402730|ref|YP_952559.1|  hypothetical protein Mvan_1730 [My...   249    4e-64 
gi|108801592|ref|YP_641789.1|  hypothetical protein Mmcs_4629 [My...   248    6e-64 
gi|254822601|ref|ZP_05227602.1|  hypothetical protein MintA_21909...   248    8e-64 
gi|296171938|ref|ZP_06852983.1|  conserved hypothetical protein [...   246    3e-63 


>gi|15840508|ref|NP_335545.1| hypothetical protein MT1103 [Mycobacterium tuberculosis CDC1551]
 gi|254231360|ref|ZP_04924687.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254363984|ref|ZP_04980030.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 22 more sequence titles
 
gi|308370073|ref|ZP_07420201.2| hypothetical protein TMBG_01537 [Mycobacterium tuberculosis SUMu002]
 gi|308371851|ref|ZP_07426458.2| hypothetical protein TMDG_03893 [Mycobacterium tuberculosis SUMu004]
 gi|308373023|ref|ZP_07430771.2| hypothetical protein TMEG_00965 [Mycobacterium tuberculosis SUMu005]
 gi|308374192|ref|ZP_07435167.2| hypothetical protein TMFG_02895 [Mycobacterium tuberculosis SUMu006]
 gi|308375347|ref|ZP_07443603.2| hypothetical protein TMGG_03153 [Mycobacterium tuberculosis SUMu007]
 gi|308376609|ref|ZP_07439421.2| hypothetical protein TMHG_00250 [Mycobacterium tuberculosis SUMu008]
 gi|308377608|ref|ZP_07479797.2| hypothetical protein TMIG_03820 [Mycobacterium tuberculosis SUMu009]
 gi|308398515|ref|ZP_07492728.2| hypothetical protein TMLG_03949 [Mycobacterium tuberculosis SUMu012]
 gi|13880683|gb|AAK45359.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|124600419|gb|EAY59429.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|134149498|gb|EBA41543.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|308325411|gb|EFP14262.1| hypothetical protein TMBG_01537 [Mycobacterium tuberculosis SUMu002]
 gi|308335249|gb|EFP24100.1| hypothetical protein TMDG_03893 [Mycobacterium tuberculosis SUMu004]
 gi|308339055|gb|EFP27906.1| hypothetical protein TMEG_00965 [Mycobacterium tuberculosis SUMu005]
 gi|308342733|gb|EFP31584.1| hypothetical protein TMFG_02895 [Mycobacterium tuberculosis SUMu006]
 gi|308346608|gb|EFP35459.1| hypothetical protein TMGG_03153 [Mycobacterium tuberculosis SUMu007]
 gi|308350533|gb|EFP39384.1| hypothetical protein TMHG_00250 [Mycobacterium tuberculosis SUMu008]
 gi|308355181|gb|EFP44032.1| hypothetical protein TMIG_03820 [Mycobacterium tuberculosis SUMu009]
 gi|308366705|gb|EFP55556.1| hypothetical protein TMLG_03949 [Mycobacterium tuberculosis SUMu012]
 gi|323720464|gb|EGB29550.1| hypothetical protein TMMG_03073 [Mycobacterium tuberculosis CDC1551A]
 gi|339294070|gb|AEJ46181.1| hypothetical protein CCDC5079_0991 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339297710|gb|AEJ49820.1| hypothetical protein CCDC5180_0983 [Mycobacterium tuberculosis 
CCDC5180]
Length=286

 Score =  574 bits (1479),  Expect = 5e-162, Method: Compositional matrix adjust.
 Identities = 283/283 (100%), Positives = 283/283 (100%), Gaps = 0/283 (0%)

Query  1    MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI  60
            MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI
Sbjct  4    MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI  63

Query  61   AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA  120
            AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA
Sbjct  64   AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA  123

Query  121  FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP  180
            FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP
Sbjct  124  FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP  183

Query  181  KETWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFV  240
            KETWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFV
Sbjct  184  KETWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFV  243

Query  241  KDVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTSRR  283
            KDVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTSRR
Sbjct  244  KDVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTSRR  286


>gi|15608213|ref|NP_215589.1| hypothetical protein Rv1073 [Mycobacterium tuberculosis H37Rv]
 gi|31792264|ref|NP_854757.1| hypothetical protein Mb1102 [Mycobacterium bovis AF2122/97]
 gi|121637002|ref|YP_977225.1| hypothetical protein BCG_1131 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 34 more sequence titles
 
gi|148660858|ref|YP_001282381.1| hypothetical protein MRA_1083 [Mycobacterium tuberculosis H37Ra]
 gi|148822282|ref|YP_001287036.1| hypothetical protein TBFG_11091 [Mycobacterium tuberculosis F11]
 gi|167967367|ref|ZP_02549644.1| hypothetical protein MtubH3_04737 [Mycobacterium tuberculosis 
H37Ra]
 gi|224989475|ref|YP_002644162.1| hypothetical protein JTY_1104 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|254550064|ref|ZP_05140511.1| hypothetical protein Mtube_06339 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289442500|ref|ZP_06432244.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289446659|ref|ZP_06436403.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289569061|ref|ZP_06449288.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289573716|ref|ZP_06453943.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289749605|ref|ZP_06508983.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289753136|ref|ZP_06512514.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289757158|ref|ZP_06516536.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289761211|ref|ZP_06520589.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|298524571|ref|ZP_07011980.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|339631137|ref|YP_004722779.1| hypothetical protein MAF_10860 [Mycobacterium africanum GM041182]
 gi|2896710|emb|CAA17189.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|31617852|emb|CAD93962.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121492649|emb|CAL71118.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|148505010|gb|ABQ72819.1| hypothetical protein MRA_1083 [Mycobacterium tuberculosis H37Ra]
 gi|148720809|gb|ABR05434.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224772588|dbj|BAH25394.1| hypothetical protein JTY_1104 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|289415419|gb|EFD12659.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289419617|gb|EFD16818.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289538147|gb|EFD42725.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289542815|gb|EFD46463.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289690192|gb|EFD57621.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289693723|gb|EFD61152.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289708717|gb|EFD72733.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289712722|gb|EFD76734.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298494365|gb|EFI29659.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|326904702|gb|EGE51635.1| hypothetical protein TBPG_02613 [Mycobacterium tuberculosis W-148]
 gi|339330493|emb|CCC26158.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|341601018|emb|CCC63690.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344218900|gb|AEM99530.1| hypothetical protein MTCTRI2_1101 [Mycobacterium tuberculosis 
CTRI-2]
Length=283

 Score =  573 bits (1478),  Expect = 8e-162, Method: Compositional matrix adjust.
 Identities = 283/283 (100%), Positives = 283/283 (100%), Gaps = 0/283 (0%)

Query  1    MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI  60
            MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI
Sbjct  1    MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI  60

Query  61   AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA  120
            AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA
Sbjct  61   AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA  120

Query  121  FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP  180
            FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP
Sbjct  121  FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP  180

Query  181  KETWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFV  240
            KETWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFV
Sbjct  181  KETWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFV  240

Query  241  KDVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTSRR  283
            KDVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTSRR
Sbjct  241  KDVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTSRR  283


>gi|308231722|ref|ZP_07413558.2| hypothetical protein TMAG_03890 [Mycobacterium tuberculosis SUMu001]
 gi|308378818|ref|ZP_07483985.2| hypothetical protein TMJG_02752 [Mycobacterium tuberculosis SUMu010]
 gi|308379960|ref|ZP_07488222.2| hypothetical protein TMKG_01568 [Mycobacterium tuberculosis SUMu011]
 gi|308216248|gb|EFO75647.1| hypothetical protein TMAG_03890 [Mycobacterium tuberculosis SUMu001]
 gi|308359137|gb|EFP47988.1| hypothetical protein TMJG_02752 [Mycobacterium tuberculosis SUMu010]
 gi|308363052|gb|EFP51903.1| hypothetical protein TMKG_01568 [Mycobacterium tuberculosis SUMu011]
Length=286

 Score =  572 bits (1474),  Expect = 2e-161, Method: Compositional matrix adjust.
 Identities = 282/283 (99%), Positives = 282/283 (99%), Gaps = 0/283 (0%)

Query  1    MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI  60
            MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI
Sbjct  4    MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI  63

Query  61   AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA  120
            AGASASALHGAKWVDDHALVELIW NARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA
Sbjct  64   AGASASALHGAKWVDDHALVELIWSNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA  123

Query  121  FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP  180
            FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP
Sbjct  124  FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP  183

Query  181  KETWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFV  240
            KETWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFV
Sbjct  184  KETWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFV  243

Query  241  KDVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTSRR  283
            KDVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTSRR
Sbjct  244  KDVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTSRR  286


>gi|289744813|ref|ZP_06504191.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289685341|gb|EFD52829.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=283

 Score =  572 bits (1474),  Expect = 2e-161, Method: Compositional matrix adjust.
 Identities = 282/283 (99%), Positives = 283/283 (100%), Gaps = 0/283 (0%)

Query  1    MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI  60
            MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI
Sbjct  1    MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI  60

Query  61   AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA  120
            AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLT+TTVERTA
Sbjct  61   AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTLTTVERTA  120

Query  121  FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP  180
            FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP
Sbjct  121  FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP  180

Query  181  KETWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFV  240
            KETWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFV
Sbjct  181  KETWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFV  240

Query  241  KDVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTSRR  283
            KDVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTSRR
Sbjct  241  KDVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTSRR  283


>gi|340626084|ref|YP_004744536.1| hypothetical protein MCAN_10791 [Mycobacterium canettii CIPT 
140010059]
 gi|340004274|emb|CCC43415.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=283

 Score =  572 bits (1473),  Expect = 3e-161, Method: Compositional matrix adjust.
 Identities = 282/283 (99%), Positives = 283/283 (100%), Gaps = 0/283 (0%)

Query  1    MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI  60
            MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI
Sbjct  1    MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI  60

Query  61   AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA  120
            AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA
Sbjct  61   AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA  120

Query  121  FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP  180
            FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP
Sbjct  121  FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP  180

Query  181  KETWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFV  240
            KETWLRLLLINAGFPRPSTQIPLLGVYG+PKYFLDMGWEDIMLAVEYDGEQHRLSRDQFV
Sbjct  181  KETWLRLLLINAGFPRPSTQIPLLGVYGYPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFV  240

Query  241  KDVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTSRR  283
            KDVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTSRR
Sbjct  241  KDVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTSRR  283


>gi|294992914|ref|ZP_06798605.1| hypothetical protein Mtub2_00005 [Mycobacterium tuberculosis 
210]
Length=214

 Score =  427 bits (1097),  Expect = 1e-117, Method: Compositional matrix adjust.
 Identities = 211/211 (100%), Positives = 211/211 (100%), Gaps = 0/211 (0%)

Query  1    MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI  60
            MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI
Sbjct  4    MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI  63

Query  61   AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA  120
            AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA
Sbjct  64   AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA  123

Query  121  FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP  180
            FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP
Sbjct  124  FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP  183

Query  181  KETWLRLLLINAGFPRPSTQIPLLGVYGHPK  211
            KETWLRLLLINAGFPRPSTQIPLLGVYGHPK
Sbjct  184  KETWLRLLLINAGFPRPSTQIPLLGVYGHPK  214


>gi|333992760|ref|YP_004525374.1| hypothetical protein JDM601_4120 [Mycobacterium sp. JDM601]
 gi|333488728|gb|AEF38120.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=279

 Score =  352 bits (903),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 184/278 (67%), Positives = 221/278 (80%), Gaps = 0/278 (0%)

Query  5    PFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGAS  64
            PF+GS ALAAG ++ +EL +++ A++PNVYL  R +PSL+QR +AAWLWSG + V+AGA+
Sbjct  2    PFVGSAALAAGNLTRYELRRHHVAVLPNVYLPTRTRPSLQQRTVAAWLWSGGQAVVAGAA  61

Query  65   ASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLG  124
            ASALHGAKWVD    +ELIWRN   P GV T+++LLL GE Q   G+ VTTV RTAFDLG
Sbjct  62   ASALHGAKWVDATVPIELIWRNTHPPAGVLTRNDLLLPGEQQHRRGMAVTTVARTAFDLG  121

Query  125  RRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETW  184
            RR  LGQA+ RLDALANAT  +  DV ELAR+H HTRGLRQL+ ALDLVD GA+SPKETW
Sbjct  122  RRGHLGQAVARLDALANATGLRTADVLELARRHRHTRGLRQLEAALDLVDAGAESPKETW  181

Query  185  LRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVE  244
            LRLLL+  GFPRP+TQIP+ G  G PKYFLDMGW+D+MLAVEYDGE H   R Q+V D  
Sbjct  182  LRLLLMGGGFPRPTTQIPVPGPDGRPKYFLDMGWQDLMLAVEYDGEHHLTDRPQYVWDAT  241

Query  245  RLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTSR  282
            RLEYIR+ GWTHI+VL +H+G DV+RRVR AW+TLT R
Sbjct  242  RLEYIRQLGWTHIKVLKEHRGGDVLRRVRAAWNTLTLR  279


>gi|108801117|ref|YP_641314.1| hypothetical protein Mmcs_4153 [Mycobacterium sp. MCS]
 gi|119870258|ref|YP_940210.1| hypothetical protein Mkms_4228 [Mycobacterium sp. KMS]
 gi|108771536|gb|ABG10258.1| conserved hypothetical protein [Mycobacterium sp. MCS]
 gi|119696347|gb|ABL93420.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=281

 Score =  344 bits (882),  Expect = 9e-93, Method: Compositional matrix adjust.
 Identities = 173/281 (62%), Positives = 211/281 (76%), Gaps = 0/281 (0%)

Query  1    MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI  60
            M   PFIGSEALA G ++ +EL +Y+ AIMP+VY+D+R +PSLRQR ++AWLW+ R+GV+
Sbjct  1    MDDLPFIGSEALADGRLTRYELRRYHRAIMPDVYVDRRAEPSLRQRTVSAWLWTRREGVV  60

Query  61   AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA  120
            AG  A+ALHGAKW+DD   VELIWRNAR P GV T+ + LLDGEV  L GL VTT +RTA
Sbjct  61   AGLPAAALHGAKWIDDDVPVELIWRNARTPPGVVTRADALLDGEVATLDGLPVTTADRTA  120

Query  121  FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP  180
            FDLGRR PL  A+ RLDAL  ATD  + D+  LA  HPHTRGLRQL+KALDLVD GA+SP
Sbjct  121  FDLGRRGPLTAAVARLDALIRATDLGVGDIEALAAGHPHTRGLRQLEKALDLVDVGAESP  180

Query  181  KETWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFV  240
            KETWLRLLLI   FPRP TQIP+    GH  Y+LDMGWED+ LAVEYDG+ HR ++D+F 
Sbjct  181  KETWLRLLLIRHDFPRPRTQIPVPAPDGHTTYYLDMGWEDLELAVEYDGDHHRTTKDRFA  240

Query  241  KDVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTS  281
             +++R E I  AGW  +RV A  +  DV+RRV +AW   TS
Sbjct  241  YEIQRAEDIAAAGWHVVRVAARSREADVIRRVTRAWRLRTS  281


>gi|126436955|ref|YP_001072646.1| hypothetical protein Mjls_4384 [Mycobacterium sp. JLS]
 gi|126236755|gb|ABO00156.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=281

 Score =  344 bits (882),  Expect = 9e-93, Method: Compositional matrix adjust.
 Identities = 173/281 (62%), Positives = 211/281 (76%), Gaps = 0/281 (0%)

Query  1    MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI  60
            M   PFIGSEALA G ++ +EL +Y+ AIMP+VY+D+R +PSLRQR ++AWLW+ R+GV+
Sbjct  1    MDDLPFIGSEALADGRLTRYELRRYHRAIMPDVYVDRRAEPSLRQRTVSAWLWTRREGVV  60

Query  61   AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA  120
            AG  A+ALHGAKW+DD   VELIWRNAR P GV T+ + LLDGEV  L GL VTT +RTA
Sbjct  61   AGLPAAALHGAKWIDDDVPVELIWRNARTPPGVVTRADALLDGEVATLDGLPVTTADRTA  120

Query  121  FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP  180
            FDLGRR PL  A+ RLDAL  ATD  + D+  LA  HPHTRGLRQL+KALDLVD GA+SP
Sbjct  121  FDLGRRGPLTAAVARLDALIRATDVGVGDIEALAAAHPHTRGLRQLEKALDLVDVGAESP  180

Query  181  KETWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFV  240
            KETWLRLLLI   FPRP TQIP+    GH  Y+LDMGWED+ LAVEYDG+ HR ++D+F 
Sbjct  181  KETWLRLLLIRHDFPRPRTQIPVPAPDGHTTYYLDMGWEDLELAVEYDGDHHRTTKDRFA  240

Query  241  KDVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTS  281
             +++R E I  AGW  +RV A  +  DV+RRV +AW   TS
Sbjct  241  YEIQRAEDIAAAGWHVVRVAARSREADVIRRVTRAWRLRTS  281


>gi|328459637|gb|AEB05060.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
Length=168

 Score =  321 bits (822),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 159/163 (98%), Positives = 159/163 (98%), Gaps = 0/163 (0%)

Query  1    MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI  60
            MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI
Sbjct  4    MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI  63

Query  61   AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA  120
            AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA
Sbjct  64   AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA  123

Query  121  FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGL  163
            FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHP   G 
Sbjct  124  FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPILAGC  166


>gi|253799891|ref|YP_003032892.1| hypothetical protein TBMG_02914 [Mycobacterium tuberculosis KZN 
1435]
 gi|289555144|ref|ZP_06444354.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|253321394|gb|ACT25997.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289439776|gb|EFD22269.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
Length=165

 Score =  320 bits (820),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 159/163 (98%), Positives = 159/163 (98%), Gaps = 0/163 (0%)

Query  1    MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI  60
            MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI
Sbjct  1    MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI  60

Query  61   AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA  120
            AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA
Sbjct  61   AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA  120

Query  121  FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGL  163
            FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHP   G 
Sbjct  121  FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPILAGC  163


>gi|296167867|ref|ZP_06850050.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295896992|gb|EFG76615.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=286

 Score =  291 bits (746),  Expect = 6e-77, Method: Compositional matrix adjust.
 Identities = 151/273 (56%), Positives = 200/273 (74%), Gaps = 0/273 (0%)

Query  3    AQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAG  62
             +PFIGS+AL +G ++ H+L   Y A+ PNVY+      SL +R+ AAWLWSGR   IAG
Sbjct  4    GKPFIGSDALESGALNRHQLRARYRAVFPNVYVSNGAGLSLERRISAAWLWSGRAATIAG  63

Query  63   ASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFD  122
            A+A+ALHG+KW+ D  L+EL   N R P GV T+   LL+GE Q + G  VTT ERTAFD
Sbjct  64   AAAAALHGSKWIPDDVLIELHHANTRPPRGVLTRRGALLEGETQTVGGYPVTTPERTAFD  123

Query  123  LGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKE  182
            +GRR  +  A+ RLDALA AT FK++DV  +A++HP + GLR+L+ AL+LVDPGAQSP+E
Sbjct  124  IGRRGAVRSAVVRLDALARATGFKVDDVLRIAKRHPGSPGLRRLETALELVDPGAQSPRE  183

Query  183  TWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKD  242
            ++LRLLLI+AG PRP TQIP+LGV G P  FLD+GW + M+AVEYDG+QHR  R Q+VKD
Sbjct  184  SYLRLLLIDAGLPRPQTQIPVLGVDGIPVAFLDLGWAEDMVAVEYDGDQHRTERRQYVKD  243

Query  243  VERLEYIRRAGWTHIRVLADHKGPDVVRRVRQA  275
            + R+E + + GW  +RV+A+ +   +VRRVR A
Sbjct  244  IRRIEMLEQMGWIVVRVVAEDRPAVIVRRVRDA  276


>gi|240172475|ref|ZP_04751134.1| hypothetical protein MkanA1_24385 [Mycobacterium kansasii ATCC 
12478]
Length=285

 Score =  290 bits (742),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 143/272 (53%), Positives = 194/272 (72%), Gaps = 0/272 (0%)

Query  4    QPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGA  63
            +PF+GSEA+ +G +  H+L   + A+ P+VY+ +  + +L QR +AAWLWS R+GV+AG 
Sbjct  5    EPFVGSEAVRSGTLRPHQLRSRFRAVYPDVYVRRDQQLTLHQRAVAAWLWSHRRGVLAGL  64

Query  64   SASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDL  123
            +A+A HG+KWVD+   VEL+W NAR P G+RT D  L   E   + G+ VTT +RTA+D+
Sbjct  65   TAAAWHGSKWVDELLPVELVWSNARPPRGLRTYDVRLRPEEHDVVGGIPVTTPQRTAYDI  124

Query  124  GRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKET  183
            GRR P+G AI  LDAL  ATD K+ +V E+A +H   RGLRQL+ AL+LVD G+QSPKE+
Sbjct  125  GRRKPMGTAIAHLDALLGATDVKVAEVAEVADRHRGARGLRQLESALELVDTGSQSPKES  184

Query  184  WLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDV  243
            WLRLL+I AG PRP+TQIP+    G   Y+LDMGW D+M+AVEYDGE HRL R Q+ +D+
Sbjct  185  WLRLLIIGAGLPRPTTQIPVAPSDGTRMYYLDMGWPDLMVAVEYDGEHHRLDRWQYTRDI  244

Query  244  ERLEYIRRAGWTHIRVLADHKGPDVVRRVRQA  275
             R E + R GW  +RV+A     D++RR+R A
Sbjct  245  RRSEALERLGWLVVRVVATDSPADIIRRIRAA  276


>gi|342859111|ref|ZP_08715765.1| hypothetical protein MCOL_09543 [Mycobacterium colombiense CECT 
3035]
 gi|342133352|gb|EGT86555.1| hypothetical protein MCOL_09543 [Mycobacterium colombiense CECT 
3035]
Length=285

 Score =  288 bits (738),  Expect = 5e-76, Method: Compositional matrix adjust.
 Identities = 158/275 (58%), Positives = 199/275 (73%), Gaps = 0/275 (0%)

Query  1    MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI  60
            MG  P IGSE LA+G +S H L   Y  I P+VY+   + PSLR R  AAWLWSGRK VI
Sbjct  1    MGDAPLIGSEELASGRLSRHRLRAAYRPIFPDVYVPAHVAPSLRVRTRAAWLWSGRKAVI  60

Query  61   AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA  120
             GA+A+ALHGA+W+ D   VELI  N+R P+GV T+ E L  GE Q   GL VTT ERTA
Sbjct  61   GGAAAAALHGAQWIPDEVPVELIHSNSRPPDGVLTRRETLGVGETQLCDGLVVTTPERTA  120

Query  121  FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP  180
            FD+GRR  +  A+ RLDALA AT FK++D   +A+ HP T GLR+L+ ALDLVDPGAQSP
Sbjct  121  FDIGRRGAVRSAVVRLDALARATGFKVDDALRVAKAHPRTHGLRRLEAALDLVDPGAQSP  180

Query  181  KETWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFV  240
            +E++LRLLLI+AG PRP TQIP+LGV G P  +LD+GW++ ++AVEYDG+QHR  R Q+V
Sbjct  181  RESYLRLLLIDAGLPRPQTQIPVLGVDGLPVAYLDLGWQERLVAVEYDGDQHRTDRRQYV  240

Query  241  KDVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQA  275
            KD+ R E + R GW  +RV+A+ +   +VRRVR A
Sbjct  241  KDIHRAETLERQGWIVVRVVAEDRPAGIVRRVRAA  275


>gi|183980735|ref|YP_001849026.1| hypothetical protein MMAR_0712 [Mycobacterium marinum M]
 gi|183174061|gb|ACC39171.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=286

 Score =  286 bits (733),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 151/273 (56%), Positives = 196/273 (72%), Gaps = 0/273 (0%)

Query  5    PFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGAS  64
            PFIGS+ALA G ++ H+L   Y  ++PNVYL   + P L+ R+ AAWLWS     + GA+
Sbjct  7    PFIGSKALACGAVTRHQLRTRYRPVLPNVYLSAGVHPCLQSRIAAAWLWSRGSATVGGAA  66

Query  65   ASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLG  124
            A+ALHGAKW+ +   VELI   +R P GV T+ ++L+DGE Q L G +VTT ERTAFD+G
Sbjct  67   AAALHGAKWIPEDVPVELICARSRPPRGVLTRRDVLIDGETQFLGGYSVTTAERTAFDIG  126

Query  125  RRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETW  184
            RR  +  A+ RLDALA AT F + DV ++AR H  TRGLRQL+ AL+LVDPGAQSP+E++
Sbjct  127  RRGAMRSAVVRLDALARATGFTVADVLQVARNHRGTRGLRQLETALELVDPGAQSPRESY  186

Query  185  LRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVE  244
            LRL LI+AG PRP TQ+P+LGV G P  +LDMGWE  M+AVEYDG+ HR  R Q+VKD+ 
Sbjct  187  LRLFLIDAGLPRPQTQLPVLGVNGMPVAYLDMGWERYMVAVEYDGDHHRSDRQQYVKDIR  246

Query  245  RLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWD  277
            R E + R GW  IRV+A+ +  D++RRV  A D
Sbjct  247  RGEMLERMGWIVIRVVAEDRRVDILRRVTAALD  279


>gi|108801239|ref|YP_641436.1| hypothetical protein Mmcs_4275 [Mycobacterium sp. MCS]
 gi|119870390|ref|YP_940342.1| hypothetical protein Mkms_4361 [Mycobacterium sp. KMS]
 gi|108771658|gb|ABG10380.1| conserved hypothetical protein [Mycobacterium sp. MCS]
 gi|119696479|gb|ABL93552.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=289

 Score =  284 bits (726),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 140/271 (52%), Positives = 193/271 (72%), Gaps = 0/271 (0%)

Query  6    FIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGASA  65
             +GSEA+  G +S   L   Y  I P+VY+    +PSL    + AWLWS R+ VI G +A
Sbjct  5    ILGSEAIDRGEVSRQGLRSAYRTIFPDVYIPAVAEPSLYANTVGAWLWSKRRAVITGKAA  64

Query  66   SALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLGR  125
            +ALHGA+WVD+++ VELIWRN R P+G+ T+++     EV  + GL V +++RTAFDLGR
Sbjct  65   AALHGAEWVDENSPVELIWRNNRPPHGIVTRNDRFTCDEVVEIYGLAVASIQRTAFDLGR  124

Query  126  RPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETWL  185
              P G+A+  LDALA AT   ++ V  LA ++   RG+R+  +AL L+D GAQSP+ETWL
Sbjct  125  FLPRGEAVAHLDALARATGLAVDHVLPLAEQYRGARGVRRCREALGLMDGGAQSPRETWL  184

Query  186  RLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVER  245
            RLLLI+AGFPRP+TQIP+L  YG P   LDMGWE +M+AVEYDG+QH++ R ++V D +R
Sbjct  185  RLLLIDAGFPRPTTQIPVLDDYGDPFAHLDMGWERLMIAVEYDGKQHQIDRSRYVWDHKR  244

Query  246  LEYIRRAGWTHIRVLADHKGPDVVRRVRQAW  276
            L  +RR GW HIRV+++ +  D++RRVR+AW
Sbjct  245  LTMLRRRGWLHIRVISEDRPYDILRRVREAW  275


>gi|240168874|ref|ZP_04747533.1| hypothetical protein MkanA1_06155 [Mycobacterium kansasii ATCC 
12478]
Length=285

 Score =  283 bits (724),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 152/271 (57%), Positives = 204/271 (76%), Gaps = 0/271 (0%)

Query  5    PFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGAS  64
            PF+GSEALA   ++ H+L  +Y A++PNVYL +R + SL QR+ AAWLWS    VIAGA+
Sbjct  7    PFLGSEALACRALTRHQLRTHYRAVLPNVYLSRRAQVSLEQRIAAAWLWSRGSAVIAGAA  66

Query  65   ASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLG  124
            A+ALHGAKW+ D   VELI RN+R P+GV T+ ++L DGE+Q + G  VTT ERTAFD+G
Sbjct  67   AAALHGAKWIPDDFPVELICRNSRPPHGVLTRRDVLGDGEIQTVDGRAVTTPERTAFDIG  126

Query  125  RRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETW  184
            RR  +  A+ RLDALA AT FK++DV  +A +HP  RG+RQL+ AL+LVD GAQSP+E++
Sbjct  127  RRGAVRSAVVRLDALARATGFKVDDVLCVAARHPGARGVRQLEIALELVDSGAQSPRESY  186

Query  185  LRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVE  244
            LRLLLI+AGFPRP +QI + G  G P  +LD+GWED M+AVEYDG+ H+  R Q+VKD+ 
Sbjct  187  LRLLLIDAGFPRPRSQIAVSGADGMPIAYLDLGWEDYMVAVEYDGDHHQRDRQQYVKDIR  246

Query  245  RLEYIRRAGWTHIRVLADHKGPDVVRRVRQA  275
            R+E + + GW  IRV+A+ +  D++RRV+ A
Sbjct  247  RIEMLEQLGWIVIRVVAEDRPADILRRVQAA  277


>gi|118618245|ref|YP_906577.1| hypothetical protein MUL_2811 [Mycobacterium ulcerans Agy99]
 gi|118570355|gb|ABL05106.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=286

 Score =  283 bits (723),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 149/271 (55%), Positives = 194/271 (72%), Gaps = 0/271 (0%)

Query  5    PFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGAS  64
            PFIGS+ALA G ++ H+L   Y  ++PNVYL   + P L+ R+ AAWLWS     + GA+
Sbjct  7    PFIGSKALACGAVTRHQLRTRYRPVLPNVYLSAGVHPCLQSRIAAAWLWSRGSATVGGAA  66

Query  65   ASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLG  124
            A+ALHGAKW+ +   VELI   +  P GV T+ ++L+DGE Q L G +VTT ERTAFD+G
Sbjct  67   AAALHGAKWIPEDVPVELICARSSPPRGVLTRRDVLIDGETQFLGGYSVTTAERTAFDIG  126

Query  125  RRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETW  184
            RR  +  A+ RLDALA AT F + DV ++AR H  TRGLRQL+ AL+LVDPGAQSP+E++
Sbjct  127  RRGAMRSAVVRLDALARATGFTVADVLQVARNHRGTRGLRQLETALELVDPGAQSPRESY  186

Query  185  LRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVE  244
            LRL LI+AG PRP TQ+P+LGV G P  +LDMGWE  M+AVEYDG+ HR  R Q+VKD+ 
Sbjct  187  LRLFLIDAGLPRPQTQLPVLGVNGMPVAYLDMGWERYMVAVEYDGDHHRSDRQQYVKDIR  246

Query  245  RLEYIRRAGWTHIRVLADHKGPDVVRRVRQA  275
            R E + R GW  IRV+A+ +  D++RRV  A
Sbjct  247  RGEMLERMGWIVIRVVAEDRRVDILRRVTAA  277


>gi|126437219|ref|YP_001072910.1| hypothetical protein Mjls_4654 [Mycobacterium sp. JLS]
 gi|126237019|gb|ABO00420.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=289

 Score =  278 bits (712),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 139/271 (52%), Positives = 190/271 (71%), Gaps = 0/271 (0%)

Query  6    FIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGASA  65
             +GSEA+  G +S   L   Y AI P+VY+ K  +PSL    + AWLWS R+ VI G +A
Sbjct  5    ILGSEAIDRGEVSRQGLRSAYRAIFPDVYMPKVAEPSLYANTVGAWLWSKRRAVITGKAA  64

Query  66   SALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLGR  125
            +ALHGA+WVDD + VELIW+N R P+G+ T+++     EV  + GL V +++RTAFDLGR
Sbjct  65   AALHGAEWVDDDSPVELIWQNNRPPHGIVTRNDRFTCEEVVEIYGLAVASIQRTAFDLGR  124

Query  126  RPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETWL  185
              P G+A+  LDALA AT   +  V  L  ++   RG+++  +AL L+D GAQSPKETWL
Sbjct  125  FLPRGEAVAHLDALARATGLAVEHVLPLVEQYRGARGVQRCREALRLMDAGAQSPKETWL  184

Query  186  RLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVER  245
            RLLLI+AGFPRP+TQIP+L  YG P   LDMGWE +M+AVEYDG++H+  R ++V D +R
Sbjct  185  RLLLIDAGFPRPTTQIPVLDDYGDPFAHLDMGWERLMIAVEYDGKEHQNDRSRYVWDHKR  244

Query  246  LEYIRRAGWTHIRVLADHKGPDVVRRVRQAW  276
            L  +RR GW HIRV+ + +  +++RRVR+AW
Sbjct  245  LTMLRRRGWLHIRVINEDRPYEILRRVREAW  275


>gi|254818869|ref|ZP_05223870.1| hypothetical protein MintA_03034 [Mycobacterium intracellulare 
ATCC 13950]
Length=284

 Score =  276 bits (706),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 150/271 (56%), Positives = 195/271 (72%), Gaps = 0/271 (0%)

Query  5    PFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGAS  64
            PFIGSE LA+G +S H+L   Y A+ PNVY+    +  L  R+ AAWLWSGR+ VI GA+
Sbjct  2    PFIGSEELASGSLSRHQLRMSYRAVFPNVYVPTHAEVPLELRIRAAWLWSGRRAVIGGAA  61

Query  65   ASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLG  124
            A+ALHGA+W+ D+  VELI  N   P GV T+ E L  GE Q   GL VTT ERTAFD+G
Sbjct  62   AAALHGAQWIPDNVPVELIHTNTHPPRGVLTRRETLCAGETQTRDGLAVTTPERTAFDIG  121

Query  125  RRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETW  184
            RR  +  A+ RLDALA AT FK++DV ++A  HP   G+R+L+ ALDLVDPGAQSP+E++
Sbjct  122  RRGAVRSAVVRLDALARATGFKVDDVLDVAAAHPRAPGVRRLEVALDLVDPGAQSPRESY  181

Query  185  LRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVE  244
            LRLLLI+AG  RP TQIP+LG  G P  +LD+GWE+ ++AVEYDG+ HR  R QFVKD+ 
Sbjct  182  LRLLLIDAGLARPQTQIPVLGADGLPFAYLDLGWEESLVAVEYDGDHHRTDRRQFVKDLR  241

Query  245  RLEYIRRAGWTHIRVLADHKGPDVVRRVRQA  275
            R+E +   GWT +RV+A+ +   ++RRVR+A
Sbjct  242  RMEMLEEMGWTIVRVVAEDRPASILRRVREA  272


>gi|240173343|ref|ZP_04752001.1| hypothetical protein MkanA1_28781 [Mycobacterium kansasii ATCC 
12478]
Length=281

 Score =  274 bits (701),  Expect = 9e-72, Method: Compositional matrix adjust.
 Identities = 140/270 (52%), Positives = 184/270 (69%), Gaps = 1/270 (0%)

Query  6    FIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGASA  65
            FIGSEA+++  ++ HEL ++Y  + P VY  ++   SLR R I AWLWSGR+ VIAG +A
Sbjct  5    FIGSEAVSSSKVTRHELQRWYRRVYPGVYAPQQHNMSLRDRTIGAWLWSGRRAVIAGVAA  64

Query  66   SALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLGR  125
            SALHGA+W+DD   +ELIW N R P G+  +DE+L D E+ R+ GL VTT+ RTA+DLGR
Sbjct  65   SALHGAQWIDDDVAIELIWCNIRPPRGLVARDEVLADDEITRVVGLPVTTLARTAYDLGR  124

Query  126  RPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETWL  185
                GQA+ RLDAL  AT F   DV  LA+++P  RG+R+L   L LVD GA SP+ETWL
Sbjct  125  HLRRGQAVARLDALMRATPFSTEDVLLLAKRYPGARGVRRLQAVLPLVDAGAASPRETWL  184

Query  186  RLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVER  245
            RLLLI+AGFP PSTQ+P+   +      LDMGWE   +A EYDG+QHR  R ++  D  R
Sbjct  185  RLLLIDAGFPTPSTQLPVQKDW-RLIAMLDMGWEKYQVAAEYDGDQHRTDRRRYAHDQRR  243

Query  246  LEYIRRAGWTHIRVLADHKGPDVVRRVRQA  275
            L  + + GW  IRV+A+ +  +V+ RVR A
Sbjct  244  LRTLAQLGWLVIRVIAEDRSEEVIARVRNA  273


>gi|336460367|gb|EGO39267.1| hypothetical protein MAPs_41650 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=287

 Score =  273 bits (697),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 149/275 (55%), Positives = 195/275 (71%), Gaps = 0/275 (0%)

Query  1    MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI  60
            MG  P +GSE LA+G ++ H L   Y  + PNVYL  +++P+L  R+ AAWLWSGR  VI
Sbjct  1    MGETPVVGSEELASGRLNRHRLRVAYRPVFPNVYLPAQVEPTLPLRIRAAWLWSGRTAVI  60

Query  61   AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA  120
            AGA+A+A+HGA W+ D   +ELI  N RAP+GV  + + L  GE Q   GL VTT ERTA
Sbjct  61   AGAAAAAVHGAAWIPDAVPIELIHHNTRAPDGVLIRRDGLCPGETQICDGLAVTTPERTA  120

Query  121  FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP  180
            FD+GRR  +  A+ RLD+LA AT FK +DV  +A  HP + GLR+L+ AL LVDPGAQSP
Sbjct  121  FDIGRRGAVRSAVVRLDSLARATGFKADDVLRVAGAHPRSPGLRRLEAALGLVDPGAQSP  180

Query  181  KETWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFV  240
            +E++LRLLLI+AG PRP TQ+P+ G  G P  +LDMGW + M+AVEYDG+ HR  R Q+V
Sbjct  181  RESYLRLLLIDAGLPRPQTQVPVPGADGMPVAYLDMGWPEWMVAVEYDGDHHRTDRRQYV  240

Query  241  KDVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQA  275
            KD+ RLE + + GW  +RV+A+ +  D+VRRVR A
Sbjct  241  KDIRRLEMLEQLGWVIVRVVAEDRPADIVRRVRAA  275


>gi|41409990|ref|NP_962826.1| hypothetical protein MAP3892 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41398823|gb|AAS06442.1| hypothetical protein MAP_3892 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=303

 Score =  273 bits (697),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 149/275 (55%), Positives = 195/275 (71%), Gaps = 0/275 (0%)

Query  1    MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI  60
            MG  P +GSE LA+G ++ H L   Y  + PNVYL  +++P+L  R+ AAWLWSGR  VI
Sbjct  17   MGETPVVGSEELASGRLNRHRLRVAYRPVFPNVYLPAQVEPTLPLRIRAAWLWSGRTAVI  76

Query  61   AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA  120
            AGA+A+A+HGA W+ D   +ELI  N RAP+GV  + + L  GE Q   GL VTT ERTA
Sbjct  77   AGAAAAAVHGAAWIPDAVPIELIHHNTRAPDGVLIRRDGLCPGETQICDGLAVTTPERTA  136

Query  121  FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP  180
            FD+GRR  +  A+ RLD+LA AT FK +DV  +A  HP + GLR+L+ AL LVDPGAQSP
Sbjct  137  FDIGRRGAVRSAVVRLDSLARATGFKADDVLRVAGAHPRSPGLRRLEAALGLVDPGAQSP  196

Query  181  KETWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFV  240
            +E++LRLLLI+AG PRP TQ+P+ G  G P  +LDMGW + M+AVEYDG+ HR  R Q+V
Sbjct  197  RESYLRLLLIDAGLPRPQTQVPVPGADGMPVAYLDMGWPEWMVAVEYDGDHHRTDRRQYV  256

Query  241  KDVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQA  275
            KD+ RLE + + GW  +RV+A+ +  D+VRRVR A
Sbjct  257  KDIRRLEMLEQLGWVIVRVVAEDRPADIVRRVRAA  291


>gi|118463624|ref|YP_883880.1| hypothetical protein MAV_4752 [Mycobacterium avium 104]
 gi|254777191|ref|ZP_05218707.1| hypothetical protein MaviaA2_21329 [Mycobacterium avium subsp. 
avium ATCC 25291]
 gi|118164911|gb|ABK65808.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=287

 Score =  272 bits (695),  Expect = 4e-71, Method: Compositional matrix adjust.
 Identities = 149/275 (55%), Positives = 195/275 (71%), Gaps = 0/275 (0%)

Query  1    MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVI  60
            MG  P +GSE LA+G ++ H L   Y  + PNVYL  +++P+L  R+ AAWLWSGR  VI
Sbjct  1    MGEAPVVGSEELASGRLNRHRLRVAYRPVFPNVYLPAQVEPTLPLRIRAAWLWSGRTAVI  60

Query  61   AGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTA  120
            AGA+A+A+HGA W+ D   +ELI  N RAP+GV  + + L  GE Q   GL VTT ERTA
Sbjct  61   AGAAAAAVHGAAWIPDAVPIELIHHNTRAPDGVLIRRDGLCPGETQICDGLAVTTPERTA  120

Query  121  FDLGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSP  180
            FD+GRR  +  A+ RLD+LA AT FK +DV  +A  HP + GLR+L+ AL LVDPGAQSP
Sbjct  121  FDIGRRGAVRSAVVRLDSLARATGFKADDVLRVAGAHPRSPGLRRLEAALGLVDPGAQSP  180

Query  181  KETWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFV  240
            +E++LRLLLI+AG PRP TQ+P+ G  G P  +LDMGW + M+AVEYDG+ HR  R Q+V
Sbjct  181  RESYLRLLLIDAGLPRPQTQVPVPGADGLPVAYLDMGWPEWMVAVEYDGDHHRTDRRQYV  240

Query  241  KDVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQA  275
            KD+ RLE + + GW  +RV+A+ +  D+VRRVR A
Sbjct  241  KDIRRLEMLEQLGWVIVRVVAEDRPADIVRRVRAA  275


>gi|118468415|ref|YP_885190.1| hypothetical protein MSMEG_0785 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118169702|gb|ABK70598.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=289

 Score =  270 bits (689),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 140/279 (51%), Positives = 193/279 (70%), Gaps = 3/279 (1%)

Query  5    PFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGAS  64
            PF+GSEALA G ++ H+L   +  + PNVY+ K  +P+L QR + AWLWSGR+ VIAG +
Sbjct  4    PFLGSEALADGTLNRHQLRTRFRTLYPNVYVPKTSEPTLEQRTVGAWLWSGRRAVIAGPA  63

Query  65   ASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLG  124
            A+ALHGAKW+D    ++LI  N R P G+ T+ + LL GE   + G+ +T+  RTAFD+G
Sbjct  64   AAALHGAKWIDPSIPIDLIHDNPRQPRGITTRRDTLLPGETVVIGGMLLTSSARTAFDIG  123

Query  125  RRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETW  184
            RR P  + +  LDAL  AT   + D+ +LA +H   RGLR+L+  L LVD GAQSPKETW
Sbjct  124  RRSPTNRGVAHLDALLRATGCTVADIADLANRHRGARGLRRLEATLPLVDAGAQSPKETW  183

Query  185  LRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVE  244
            LRLL++  G P+P+TQIP+L   G P  +LDMGWE+ M+AVEYDG+QHR  R Q+V+D+ 
Sbjct  184  LRLLIVRDGLPKPTTQIPVLADDGTPLAYLDMGWEEWMVAVEYDGDQHRTDRRQYVRDIR  243

Query  245  RLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTSRR  283
            RLE +   GW  IRV+A+    +++RR+R A   LT+R+
Sbjct  244  RLELLAELGWIVIRVVAEDGTAEILRRIRAA---LTARQ  279


>gi|41408893|ref|NP_961729.1| hypothetical protein MAP2795 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41397252|gb|AAS05112.1| hypothetical protein MAP_2795 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=282

 Score =  263 bits (672),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 145/277 (53%), Positives = 187/277 (68%), Gaps = 4/277 (1%)

Query  6    FIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGASA  65
            F+GS+A+  G +S H L   + AI P++YL      SLR R +AAWLWSGR+GV+AG +A
Sbjct  5    FVGSDAVRRGTLSRHRLRAQFRAIYPDIYLPAHAARSLRTRSVAAWLWSGRRGVLAGLAA  64

Query  66   SALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLGR  125
            +ALHG+ W+DD   +ELIWRN   P GV T+++ L   E+ R+ GL VTT  RTAFDL R
Sbjct  65   AALHGSSWIDDDEPIELIWRNPHPPAGVITRNQRLEPDEITRVAGLPVTTPARTAFDLAR  124

Query  126  RPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETWL  185
            + P G+A+ RLDAL  AT F   +V  LA + P  RGLR+L  AL LVDPGA SPKETWL
Sbjct  125  QRPRGEAVARLDALMRATPFSTAEVLMLAERRPRARGLRKLRAALPLVDPGAASPKETWL  184

Query  186  RLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVER  245
            RLLLI+AG P P+TQIP+   +      LDMGWED ++A EYDG+ HR +R Q+ +D  R
Sbjct  185  RLLLIDAGIPVPATQIPVQQNW-RLIAVLDMGWEDYLVAAEYDGDHHRTNRRQYARDQAR  243

Query  246  LEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTSR  282
            L  +++ GW  +RV+A+ K  DVVRR R   D LT R
Sbjct  244  LRTLQKLGWIVVRVIAEDKPDDVVRRTR---DALTRR  277


>gi|289445109|ref|ZP_06434853.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289418067|gb|EFD15268.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=279

 Score =  263 bits (672),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 133/277 (49%), Positives = 178/277 (65%), Gaps = 0/277 (0%)

Query  4    QPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGA  63
            +PF+GSEA+A+G ++ H L   Y  I P+VY+      +   R  AAWLWS R+GVIAG 
Sbjct  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62

Query  64   SASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDL  123
            SA+A+HGAKWVD     EL++ + R P G+ T  + + D E+Q + G+  TT  RTA DL
Sbjct  63   SAAAMHGAKWVDARPAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122

Query  124  GRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKET  183
             RR P+G+A+  +DALA ATD K+ DV  LA ++  +RG+R    ALDLVDPGA+SP+ET
Sbjct  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182

Query  184  WLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDV  243
            WLRLLLI AGFPRP TQIP+   YG     +DMGW  I + V+Y+G+ HR  R  F KD+
Sbjct  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242

Query  244  ERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLT  280
            +R E +   GWT +RV  +     ++ RV  AW   T
Sbjct  243  KRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279


>gi|15610653|ref|NP_218034.1| hypothetical protein Rv3517 [Mycobacterium tuberculosis H37Rv]
 gi|31794692|ref|NP_857185.1| hypothetical protein Mb3546 [Mycobacterium bovis AF2122/97]
 gi|121639435|ref|YP_979659.1| hypothetical protein BCG_3580 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 66 more sequence titles
 
gi|148663380|ref|YP_001284903.1| hypothetical protein MRA_3556 [Mycobacterium tuberculosis H37Ra]
 gi|148824723|ref|YP_001289477.1| hypothetical protein TBFG_13550 [Mycobacterium tuberculosis F11]
 gi|167969127|ref|ZP_02551404.1| hypothetical protein MtubH3_14285 [Mycobacterium tuberculosis 
H37Ra]
 gi|224991932|ref|YP_002646621.1| hypothetical protein JTY_3581 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253800558|ref|YP_003033559.1| hypothetical protein TBMG_03556 [Mycobacterium tuberculosis KZN 
1435]
 gi|254366084|ref|ZP_04982128.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|254552622|ref|ZP_05143069.1| hypothetical protein Mtube_19610 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289555782|ref|ZP_06444992.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289571756|ref|ZP_06451983.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289747354|ref|ZP_06506732.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289752230|ref|ZP_06511608.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289759673|ref|ZP_06519051.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294993635|ref|ZP_06799326.1| hypothetical protein Mtub2_03781 [Mycobacterium tuberculosis 
210]
 gi|297636187|ref|ZP_06953967.1| hypothetical protein MtubK4_18775 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297733181|ref|ZP_06962299.1| hypothetical protein MtubKR_18915 [Mycobacterium tuberculosis 
KZN R506]
 gi|298526994|ref|ZP_07014403.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306777867|ref|ZP_07416204.1| hypothetical protein TMAG_00007 [Mycobacterium tuberculosis SUMu001]
 gi|306778398|ref|ZP_07416735.1| hypothetical protein TMBG_02052 [Mycobacterium tuberculosis SUMu002]
 gi|306786421|ref|ZP_07424743.1| hypothetical protein TMCG_03640 [Mycobacterium tuberculosis SUMu003]
 gi|306790785|ref|ZP_07429107.1| hypothetical protein TMDG_01247 [Mycobacterium tuberculosis SUMu004]
 gi|306791108|ref|ZP_07429410.1| hypothetical protein TMEG_00005 [Mycobacterium tuberculosis SUMu005]
 gi|306795895|ref|ZP_07434197.1| hypothetical protein TMFG_01451 [Mycobacterium tuberculosis SUMu006]
 gi|306801141|ref|ZP_07437809.1| hypothetical protein TMHG_02575 [Mycobacterium tuberculosis SUMu008]
 gi|306805353|ref|ZP_07442021.1| hypothetical protein TMGG_01053 [Mycobacterium tuberculosis SUMu007]
 gi|306969646|ref|ZP_07482307.1| hypothetical protein TMIG_03139 [Mycobacterium tuberculosis SUMu009]
 gi|306973985|ref|ZP_07486646.1| hypothetical protein TMJG_00762 [Mycobacterium tuberculosis SUMu010]
 gi|307081694|ref|ZP_07490864.1| hypothetical protein TMKG_00754 [Mycobacterium tuberculosis SUMu011]
 gi|307086304|ref|ZP_07495417.1| hypothetical protein TMLG_00005 [Mycobacterium tuberculosis SUMu012]
 gi|313660511|ref|ZP_07817391.1| hypothetical protein MtubKV_18905 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339633517|ref|YP_004725159.1| hypothetical protein MAF_35290 [Mycobacterium africanum GM041182]
 gi|340628481|ref|YP_004746933.1| hypothetical protein MCAN_35281 [Mycobacterium canettii CIPT 
140010059]
 gi|2924454|emb|CAA17754.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|31620289|emb|CAD95732.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121495083|emb|CAL73569.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|134151596|gb|EBA43641.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148507532|gb|ABQ75341.1| hypothetical protein MRA_3556 [Mycobacterium tuberculosis H37Ra]
 gi|148723250|gb|ABR07875.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224775047|dbj|BAH27853.1| hypothetical protein JTY_3581 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253322061|gb|ACT26664.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289440414|gb|EFD22907.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289545510|gb|EFD49158.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289687882|gb|EFD55370.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289692817|gb|EFD60246.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289715237|gb|EFD79249.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298496788|gb|EFI32082.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308213744|gb|EFO73143.1| hypothetical protein TMAG_00007 [Mycobacterium tuberculosis SUMu001]
 gi|308328499|gb|EFP17350.1| hypothetical protein TMBG_02052 [Mycobacterium tuberculosis SUMu002]
 gi|308328912|gb|EFP17763.1| hypothetical protein TMCG_03640 [Mycobacterium tuberculosis SUMu003]
 gi|308332809|gb|EFP21660.1| hypothetical protein TMDG_01247 [Mycobacterium tuberculosis SUMu004]
 gi|308340301|gb|EFP29152.1| hypothetical protein TMEG_00005 [Mycobacterium tuberculosis SUMu005]
 gi|308343566|gb|EFP32417.1| hypothetical protein TMFG_01451 [Mycobacterium tuberculosis SUMu006]
 gi|308348034|gb|EFP36885.1| hypothetical protein TMGG_01053 [Mycobacterium tuberculosis SUMu007]
 gi|308352030|gb|EFP40881.1| hypothetical protein TMHG_02575 [Mycobacterium tuberculosis SUMu008]
 gi|308352817|gb|EFP41668.1| hypothetical protein TMIG_03139 [Mycobacterium tuberculosis SUMu009]
 gi|308356667|gb|EFP45518.1| hypothetical protein TMJG_00762 [Mycobacterium tuberculosis SUMu010]
 gi|308360621|gb|EFP49472.1| hypothetical protein TMKG_00754 [Mycobacterium tuberculosis SUMu011]
 gi|308364236|gb|EFP53087.1| hypothetical protein TMLG_00005 [Mycobacterium tuberculosis SUMu012]
 gi|323717787|gb|EGB26984.1| hypothetical protein TMMG_00003 [Mycobacterium tuberculosis CDC1551A]
 gi|326905357|gb|EGE52290.1| hypothetical protein TBPG_03308 [Mycobacterium tuberculosis W-148]
 gi|328460289|gb|AEB05712.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339296336|gb|AEJ48447.1| hypothetical protein CCDC5079_3258 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339299937|gb|AEJ52047.1| hypothetical protein CCDC5180_3210 [Mycobacterium tuberculosis 
CCDC5180]
 gi|339332873|emb|CCC28598.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|340006671|emb|CCC45859.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
 gi|341603456|emb|CCC66137.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344221349|gb|AEN01980.1| hypothetical protein MTCTRI2_3581 [Mycobacterium tuberculosis 
CTRI-2]
Length=279

 Score =  263 bits (672),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 133/277 (49%), Positives = 178/277 (65%), Gaps = 0/277 (0%)

Query  4    QPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGA  63
            +PF+GSEA+A+G ++ H L   Y  I P+VY+      +   R  AAWLWS R+GVIAG 
Sbjct  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62

Query  64   SASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDL  123
            SA+A+HGAKWVD     EL++ + R P G+ T  + + D E+Q + G+  TT  RTA DL
Sbjct  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122

Query  124  GRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKET  183
             RR P+G+A+  +DALA ATD K+ DV  LA ++  +RG+R    ALDLVDPGA+SP+ET
Sbjct  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182

Query  184  WLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDV  243
            WLRLLLI AGFPRP TQIP+   YG     +DMGW  I + V+Y+G+ HR  R  F KD+
Sbjct  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242

Query  244  ERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLT  280
            +R E +   GWT +RV  +     ++ RV  AW   T
Sbjct  243  KRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279


>gi|254776009|ref|ZP_05217525.1| hypothetical protein MaviaA2_15255 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=282

 Score =  263 bits (671),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 145/277 (53%), Positives = 186/277 (68%), Gaps = 4/277 (1%)

Query  6    FIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGASA  65
            F+GS+A+  G +S H L   + AI P++YL      SLR R +AAWLWSGR+GV+AG +A
Sbjct  5    FVGSDAVRRGTLSRHRLRAQFRAIYPDIYLPAHAARSLRTRSVAAWLWSGRRGVLAGLAA  64

Query  66   SALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLGR  125
            +ALHG+ W+DD   +ELIWRN   P GV T+++ L   E+ R+ GL VTT  RTAFDL R
Sbjct  65   AALHGSSWIDDDEPIELIWRNPHPPAGVITRNQRLEPDEITRVAGLPVTTPARTAFDLAR  124

Query  126  RPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETWL  185
            + P G+A+ RLDAL  AT F   +V  LA + P  RGLR+L  AL LVDPGA SPKETWL
Sbjct  125  QRPRGEAVARLDALMRATPFSTEEVLMLAERRPRARGLRKLRAALPLVDPGAASPKETWL  184

Query  186  RLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVER  245
            RLLLI+AG P P+TQIP+   +      LDMGWED ++A EYDG+ HR +R Q+ +D  R
Sbjct  185  RLLLIDAGIPVPATQIPVQQNW-RLIAVLDMGWEDYLVAAEYDGDHHRTNRRQYARDQAR  243

Query  246  LEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTSR  282
            L  ++  GW  +RV+A+ K  DVVRR R   D LT R
Sbjct  244  LRALQELGWIVVRVIAEDKPDDVVRRTR---DALTRR  277


>gi|296166568|ref|ZP_06848998.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295898054|gb|EFG77630.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=281

 Score =  262 bits (670),  Expect = 4e-68, Method: Compositional matrix adjust.
 Identities = 133/274 (49%), Positives = 183/274 (67%), Gaps = 0/274 (0%)

Query  4    QPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGA  63
            QPFIGSEA+AAG ++  +L      + P+VY  + +  +   R  A WLW+ R+GVIAG 
Sbjct  3    QPFIGSEAVAAGALTKTQLATRCRRVFPDVYTGRDVAMNAESRARAGWLWAHRRGVIAGF  62

Query  64   SASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDL  123
            SA+ALHG+KWVDD  +VEL+  N R+P G++T  + + D E+  + GL VT+  RTA DL
Sbjct  63   SAAALHGSKWVDDGQVVELLHDNRRSPPGIKTHRDRIEDDEISLVAGLPVTSPARTALDL  122

Query  124  GRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKET  183
                P   A+  +DALA  T+ K  D+  LAR++   RG+ +  +A+DL DPGAQSPKE+
Sbjct  123  ACWYPTTTAVAGIDALARVTELKAVDIDLLARRYAKRRGIMRARRAVDLFDPGAQSPKES  182

Query  184  WLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDV  243
            WLR++L+ AG PRP TQIP+   +G    +LDMGW+D+ +AVEYDGEQHR  R Q+  DV
Sbjct  183  WLRIVLVEAGLPRPQTQIPVFDEFGSVFAYLDMGWDDVKVAVEYDGEQHRNDRRQYSWDV  242

Query  244  ERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWD  277
             RLE + R GW  IRV+A  +  ++VRRVR A+D
Sbjct  243  RRLETLERLGWIVIRVVAGDRPAEIVRRVRVAFD  276


>gi|289755646|ref|ZP_06515024.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289696233|gb|EFD63662.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=279

 Score =  260 bits (664),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 132/277 (48%), Positives = 177/277 (64%), Gaps = 0/277 (0%)

Query  4    QPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGA  63
            +PF+GSEA+A+G ++ H L   Y  I P+VY+      +   R  AAWLWS R+GVIAG 
Sbjct  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62

Query  64   SASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDL  123
            SA+A+HGAKWVD     EL++ + R   G+ T  + + D E+Q + G+  TT  RTA DL
Sbjct  63   SAAAMHGAKWVDARQAAELLYDHRRPAAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122

Query  124  GRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKET  183
             RR P+G+A+  +DALA ATD K+ DV  LA ++  +RG+R    ALDLVDPGA+SP+ET
Sbjct  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182

Query  184  WLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDV  243
            WLRLLLI AGFPRP TQIP+   YG     +DMGW  I + V+Y+G+ HR  R  F KD+
Sbjct  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242

Query  244  ERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLT  280
            +R E +   GWT +RV  +     ++ RV  AW   T
Sbjct  243  KRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279


>gi|336458826|gb|EGO37783.1| hypothetical protein MAPs_08850 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=277

 Score =  260 bits (664),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 144/276 (53%), Positives = 186/276 (68%), Gaps = 4/276 (1%)

Query  7    IGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGASAS  66
            +GS+A+  G +S H L   + AI P++YL      SLR R +AAWLWSGR+GV+AG +A+
Sbjct  1    MGSDAVRRGTLSRHRLRAQFRAIYPDIYLPAHAARSLRTRSVAAWLWSGRRGVLAGLAAA  60

Query  67   ALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLGRR  126
            ALHG+ W+DD   +ELIWRN   P GV T+++ L   E+ R+ GL VTT  RTAFDL R+
Sbjct  61   ALHGSSWIDDDEPIELIWRNPHPPAGVITRNQRLEPDEITRVAGLPVTTPARTAFDLARQ  120

Query  127  PPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETWLR  186
             P G+A+ RLDAL  AT F   +V  LA + P  RGLR+L  AL LVDPGA SPKETWLR
Sbjct  121  RPRGEAVARLDALMRATPFSTAEVLMLAERRPRARGLRKLRAALPLVDPGAASPKETWLR  180

Query  187  LLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVERL  246
            LLLI+AG P P+TQIP+   +      LDMGWED ++A EYDG+ HR +R Q+ +D  RL
Sbjct  181  LLLIDAGIPVPATQIPVQQNW-RLIAVLDMGWEDYLVAAEYDGDHHRTNRRQYARDQARL  239

Query  247  EYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTSR  282
              +++ GW  +RV+A+ K  DVVRR R   D LT R
Sbjct  240  RTLQKLGWIVVRVIAEDKPDDVVRRTR---DALTRR  272


>gi|183980406|ref|YP_001848697.1| hypothetical protein MMAR_0375 [Mycobacterium marinum M]
 gi|183173732|gb|ACC38842.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=292

 Score =  257 bits (656),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 138/274 (51%), Positives = 178/274 (65%), Gaps = 9/274 (3%)

Query  6    FIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGASA  65
            F+GSEA+  G +S + L   + AI P+VYL     PS R R  AAWLW+GR+GV+AG +A
Sbjct  15   FVGSEAVRRGRLSPYRLRTEFRAIYPDVYLPAHAAPSFRTRCKAAWLWTGRRGVLAGLAA  74

Query  66   SALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLGR  125
            + LHG+ W+ D   VELIWRN   P GV T+++ +   EV R+ GL VTT+ RTAFDLGR
Sbjct  75   AGLHGSDWIGDDEPVELIWRNPHPPAGVITRNQRIEPDEVTRVAGLAVTTLARTAFDLGR  134

Query  126  RPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETWL  185
            + P G+++ RLDAL  AT F   DV  LA+++   RGLR+L   L LVD GA SP+ETWL
Sbjct  135  QLPGGESVARLDALMRATAFSGEDVLLLAKRYSGARGLRRLRATLPLVDAGAASPRETWL  194

Query  186  RLLLINAGFPRPSTQIPLLGVYGHPKY----FLDMGWEDIMLAVEYDGEQHRLSRDQFVK  241
            R++LI+AG P P TQIP+     H  +     LDMGW+   +A EYDG+QHR  R Q+ +
Sbjct  195  RMVLIDAGLPVPVTQIPV-----HQNWRLVAVLDMGWQKYQVAAEYDGDQHRFDRRQYAR  249

Query  242  DVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQA  275
            D  RL  +   GW  IRV+A     DVVRRVRQA
Sbjct  250  DQWRLRKLDELGWIVIRVIAGDAPEDVVRRVRQA  283


>gi|15843335|ref|NP_338372.1| hypothetical protein MT3817 [Mycobacterium tuberculosis CDC1551]
 gi|13883697|gb|AAK48186.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length=341

 Score =  253 bits (647),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 138/270 (52%), Positives = 179/270 (67%), Gaps = 1/270 (0%)

Query  6    FIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGASA  65
            FIGSEA+ AG ++ HEL ++Y  +   VY+ +R  P+L  R + AWL + R GVIAG +A
Sbjct  65   FIGSEAITAGRLTRHELQRWYQPMFRGVYVSRRSVPTLWDRTVGAWLATRRHGVIAGNAA  124

Query  66   SALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLGR  125
            SALHGA+WVD    +ELI    R  +G+  + E L D E+ R+ GL VTT+ RTA+DLGR
Sbjct  125  SALHGAQWVDVDVAIELISPTTRPQHGLVIRRETLCDDEITRVVGLPVTTLARTAYDLGR  184

Query  126  RPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETWL  185
                G+A+ RLDAL  AT F  +DV  LA++H   RG+R+L   L LVD GA SPKETWL
Sbjct  185  HLSRGEAVARLDALMRATPFSRDDVLLLAKRHAGARGVRRLRDVLPLVDGGAASPKETWL  244

Query  186  RLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVER  245
            RLLLI+AG P P+TQIP++  + +    LDMGWE  M+A EYDG+QHR  R ++VKD  R
Sbjct  245  RLLLIDAGLPVPTTQIPVVHRWRNVG-VLDMGWEKYMVAAEYDGDQHRSDRGRYVKDQRR  303

Query  246  LEYIRRAGWTHIRVLADHKGPDVVRRVRQA  275
            L  +   GW  IRV+A+    DVV RVR A
Sbjct  304  LRKLAELGWIVIRVIAEDNPDDVVNRVRAA  333


>gi|15610850|ref|NP_218231.1| hypothetical protein Rv3714c [Mycobacterium tuberculosis H37Rv]
 gi|31794886|ref|NP_857379.1| hypothetical protein Mb3741c [Mycobacterium bovis AF2122/97]
 gi|121639630|ref|YP_979854.1| hypothetical protein BCG_3774c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 46 more sequence titles
 
gi|148663579|ref|YP_001285102.1| hypothetical protein MRA_3751 [Mycobacterium tuberculosis H37Ra]
 gi|148824919|ref|YP_001289673.1| hypothetical protein TBFG_13746 [Mycobacterium tuberculosis F11]
 gi|167970869|ref|ZP_02553146.1| hypothetical protein MtubH3_23620 [Mycobacterium tuberculosis 
H37Ra]
 gi|224992126|ref|YP_002646815.1| hypothetical protein JTY_3776 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253800760|ref|YP_003033761.1| hypothetical protein TBMG_03758 [Mycobacterium tuberculosis KZN 
1435]
 gi|254233209|ref|ZP_04926535.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254366259|ref|ZP_04982303.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|289441150|ref|ZP_06430894.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289445313|ref|ZP_06435057.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289555979|ref|ZP_06445189.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289572365|ref|ZP_06452592.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289747553|ref|ZP_06506931.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289748232|ref|ZP_06507610.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289755845|ref|ZP_06515223.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289759874|ref|ZP_06519252.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289763895|ref|ZP_06523273.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|294995376|ref|ZP_06801067.1| hypothetical protein Mtub2_12906 [Mycobacterium tuberculosis 
210]
 gi|297636392|ref|ZP_06954172.1| hypothetical protein MtubK4_19800 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297733386|ref|ZP_06962504.1| hypothetical protein MtubKR_19940 [Mycobacterium tuberculosis 
KZN R506]
 gi|298527191|ref|ZP_07014600.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|313660717|ref|ZP_07817597.1| hypothetical protein MtubKV_19935 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339633706|ref|YP_004725348.1| hypothetical protein MAF_37230 [Mycobacterium africanum GM041182]
 gi|2960138|emb|CAA18036.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|31620484|emb|CAD95927.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121495278|emb|CAL73764.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|124603002|gb|EAY61277.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|134151771|gb|EBA43816.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148507731|gb|ABQ75540.1| hypothetical protein MRA_3751 [Mycobacterium tuberculosis H37Ra]
 gi|148723446|gb|ABR08071.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224775241|dbj|BAH28047.1| hypothetical protein JTY_3776 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253322263|gb|ACT26866.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289414069|gb|EFD11309.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289418271|gb|EFD15472.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289440611|gb|EFD23104.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289536796|gb|EFD41374.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289688081|gb|EFD55569.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289688819|gb|EFD56248.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289696432|gb|EFD63861.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289711401|gb|EFD75417.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289715438|gb|EFD79450.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298496985|gb|EFI32279.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|326905553|gb|EGE52486.1| hypothetical protein TBPG_03508 [Mycobacterium tuberculosis W-148]
 gi|328460488|gb|AEB05911.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339333062|emb|CCC28792.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|341603651|emb|CCC66332.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344221551|gb|AEN02182.1| hypothetical protein MTCTRI2_3785 [Mycobacterium tuberculosis 
CTRI-2]
Length=296

 Score =  253 bits (647),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 138/270 (52%), Positives = 179/270 (67%), Gaps = 1/270 (0%)

Query  6    FIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGASA  65
            FIGSEA+ AG ++ HEL ++Y  +   VY+ +R  P+L  R + AWL + R GVIAG +A
Sbjct  20   FIGSEAITAGRLTRHELQRWYQPMFRGVYVSRRSVPTLWDRTVGAWLATRRHGVIAGNAA  79

Query  66   SALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLGR  125
            SALHGA+WVD    +ELI    R  +G+  + E L D E+ R+ GL VTT+ RTA+DLGR
Sbjct  80   SALHGAQWVDVDVAIELISPTTRPQHGLVIRRETLCDDEITRVVGLPVTTLARTAYDLGR  139

Query  126  RPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETWL  185
                G+A+ RLDAL  AT F  +DV  LA++H   RG+R+L   L LVD GA SPKETWL
Sbjct  140  HLSRGEAVARLDALMRATPFSRDDVLLLAKRHAGARGVRRLRDVLPLVDGGAASPKETWL  199

Query  186  RLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVER  245
            RLLLI+AG P P+TQIP++  + +    LDMGWE  M+A EYDG+QHR  R ++VKD  R
Sbjct  200  RLLLIDAGLPVPTTQIPVVHRWRNVG-VLDMGWEKYMVAAEYDGDQHRSDRGRYVKDQRR  258

Query  246  LEYIRRAGWTHIRVLADHKGPDVVRRVRQA  275
            L  +   GW  IRV+A+    DVV RVR A
Sbjct  259  LRKLAELGWIVIRVIAEDNPDDVVNRVRAA  288


>gi|308406227|ref|ZP_07495622.2| hypothetical protein TMLG_00204 [Mycobacterium tuberculosis SUMu012]
 gi|308364104|gb|EFP52955.1| hypothetical protein TMLG_00204 [Mycobacterium tuberculosis SUMu012]
Length=291

 Score =  253 bits (646),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 138/270 (52%), Positives = 179/270 (67%), Gaps = 1/270 (0%)

Query  6    FIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGASA  65
            FIGSEA+ AG ++ HEL ++Y  +   VY+ +R  P+L  R + AWL + R GVIAG +A
Sbjct  15   FIGSEAITAGRLTRHELQRWYQPMFRGVYVSRRSVPTLWDRTVGAWLATRRHGVIAGNAA  74

Query  66   SALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLGR  125
            SALHGA+WVD    +ELI    R  +G+  + E L D E+ R+ GL VTT+ RTA+DLGR
Sbjct  75   SALHGAQWVDVDVAIELISPTTRPQHGLVIRRETLCDDEITRVVGLPVTTLARTAYDLGR  134

Query  126  RPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETWL  185
                G+A+ RLDAL  AT F  +DV  LA++H   RG+R+L   L LVD GA SPKETWL
Sbjct  135  HLSRGEAVARLDALMRATPFSRDDVLLLAKRHAGARGVRRLRDVLPLVDGGAASPKETWL  194

Query  186  RLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVER  245
            RLLLI+AG P P+TQIP++  + +    LDMGWE  M+A EYDG+QHR  R ++VKD  R
Sbjct  195  RLLLIDAGLPVPTTQIPVVHRWRNVG-VLDMGWEKYMVAAEYDGDQHRSDRGRYVKDQRR  253

Query  246  LEYIRRAGWTHIRVLADHKGPDVVRRVRQA  275
            L  +   GW  IRV+A+    DVV RVR A
Sbjct  254  LRKLAELGWIVIRVIAEDNPDDVVNRVRAA  283


>gi|308232545|ref|ZP_07416408.2| hypothetical protein TMAG_00205 [Mycobacterium tuberculosis SUMu001]
 gi|308369209|ref|ZP_07416940.2| hypothetical protein TMBG_02253 [Mycobacterium tuberculosis SUMu002]
 gi|308371433|ref|ZP_07424948.2| hypothetical protein TMCG_01218 [Mycobacterium tuberculosis SUMu003]
 17 more sequence titles
 
gi|308372631|ref|ZP_07429314.2| hypothetical protein TMDG_01450 [Mycobacterium tuberculosis SUMu004]
 gi|308372718|ref|ZP_07429613.2| hypothetical protein TMEG_00209 [Mycobacterium tuberculosis SUMu005]
 gi|308373796|ref|ZP_07433678.2| hypothetical protein TMFG_01947 [Mycobacterium tuberculosis SUMu006]
 gi|308376202|ref|ZP_07438015.2| hypothetical protein TMHG_02778 [Mycobacterium tuberculosis SUMu008]
 gi|308379595|ref|ZP_07486849.2| hypothetical protein TMJG_00966 [Mycobacterium tuberculosis SUMu010]
 gi|308380781|ref|ZP_07491066.2| hypothetical protein TMKG_00956 [Mycobacterium tuberculosis SUMu011]
 gi|308213600|gb|EFO72999.1| hypothetical protein TMAG_00205 [Mycobacterium tuberculosis SUMu001]
 gi|308328333|gb|EFP17184.1| hypothetical protein TMBG_02253 [Mycobacterium tuberculosis SUMu002]
 gi|308328737|gb|EFP17588.1| hypothetical protein TMCG_01218 [Mycobacterium tuberculosis SUMu003]
 gi|308332579|gb|EFP21430.1| hypothetical protein TMDG_01450 [Mycobacterium tuberculosis SUMu004]
 gi|308340070|gb|EFP28921.1| hypothetical protein TMEG_00209 [Mycobacterium tuberculosis SUMu005]
 gi|308344060|gb|EFP32911.1| hypothetical protein TMFG_01947 [Mycobacterium tuberculosis SUMu006]
 gi|308351846|gb|EFP40697.1| hypothetical protein TMHG_02778 [Mycobacterium tuberculosis SUMu008]
 gi|308356461|gb|EFP45312.1| hypothetical protein TMJG_00966 [Mycobacterium tuberculosis SUMu010]
 gi|308360408|gb|EFP49259.1| hypothetical protein TMKG_00956 [Mycobacterium tuberculosis SUMu011]
 gi|323717578|gb|EGB26780.1| hypothetical protein TMMG_00205 [Mycobacterium tuberculosis CDC1551A]
 gi|339300124|gb|AEJ52234.1| hypothetical protein CCDC5180_3397 [Mycobacterium tuberculosis 
CCDC5180]
Length=284

 Score =  253 bits (646),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 138/270 (52%), Positives = 179/270 (67%), Gaps = 1/270 (0%)

Query  6    FIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGASA  65
            FIGSEA+ AG ++ HEL ++Y  +   VY+ +R  P+L  R + AWL + R GVIAG +A
Sbjct  8    FIGSEAITAGRLTRHELQRWYQPMFRGVYVSRRSVPTLWDRTVGAWLATRRHGVIAGNAA  67

Query  66   SALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLGR  125
            SALHGA+WVD    +ELI    R  +G+  + E L D E+ R+ GL VTT+ RTA+DLGR
Sbjct  68   SALHGAQWVDVDVAIELISPTTRPQHGLVIRRETLCDDEITRVVGLPVTTLARTAYDLGR  127

Query  126  RPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETWL  185
                G+A+ RLDAL  AT F  +DV  LA++H   RG+R+L   L LVD GA SPKETWL
Sbjct  128  HLSRGEAVARLDALMRATPFSRDDVLLLAKRHAGARGVRRLRDVLPLVDGGAASPKETWL  187

Query  186  RLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVER  245
            RLLLI+AG P P+TQIP++  + +    LDMGWE  M+A EYDG+QHR  R ++VKD  R
Sbjct  188  RLLLIDAGLPVPTTQIPVVHRWRNVG-VLDMGWEKYMVAAEYDGDQHRSDRGRYVKDQRR  246

Query  246  LEYIRRAGWTHIRVLADHKGPDVVRRVRQA  275
            L  +   GW  IRV+A+    DVV RVR A
Sbjct  247  LRKLAELGWIVIRVIAEDNPDDVVNRVRAA  276


>gi|340628688|ref|YP_004747140.1| hypothetical protein MCAN_37361 [Mycobacterium canettii CIPT 
140010059]
 gi|340006878|emb|CCC46067.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=296

 Score =  253 bits (645),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 138/270 (52%), Positives = 178/270 (66%), Gaps = 1/270 (0%)

Query  6    FIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGASA  65
            FIGSEA+ AG ++ HEL ++Y  +   VY+ +R  P+LR R + AWL + R GVIAG +A
Sbjct  20   FIGSEAITAGRLTRHELQRWYQPMFRGVYVSRRSVPTLRDRTVGAWLATRRHGVIAGNAA  79

Query  66   SALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLGR  125
            SALHGA+WVD    +ELI    R  +G+  + E L D E+ R+ GL VTT+ RTA+DLGR
Sbjct  80   SALHGAQWVDVDVAIELISPTTRPQHGLVIRRETLCDDEITRVVGLPVTTLARTAYDLGR  139

Query  126  RPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETWL  185
                G+A+ RLDAL  AT F  +DV  LA++H   RG+R L   L LVD GA S KETWL
Sbjct  140  HLSRGEAVARLDALMRATPFSRDDVLLLAKRHAGARGVRWLRDVLPLVDGGAASSKETWL  199

Query  186  RLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVER  245
            RLLLI+AG P P+TQIP++  + +    LDMGWE  M+A EYDG+QHR  R ++VKD  R
Sbjct  200  RLLLIDAGLPVPTTQIPVVHRWRNVG-VLDMGWEKYMVAAEYDGDQHRSDRGRYVKDQRR  258

Query  246  LEYIRRAGWTHIRVLADHKGPDVVRRVRQA  275
            L  +   GW  IRV+A+    DVV RVR A
Sbjct  259  LRKLAELGWIVIRVIAEDNPDDVVNRVRAA  288


>gi|308374960|ref|ZP_07442226.2| hypothetical protein TMGG_01257 [Mycobacterium tuberculosis SUMu007]
 gi|308378449|ref|ZP_07482616.2| hypothetical protein TMIG_00065 [Mycobacterium tuberculosis SUMu009]
 gi|308347858|gb|EFP36709.1| hypothetical protein TMGG_01257 [Mycobacterium tuberculosis SUMu007]
 gi|308352511|gb|EFP41362.1| hypothetical protein TMIG_00065 [Mycobacterium tuberculosis SUMu009]
Length=284

 Score =  252 bits (644),  Expect = 4e-65, Method: Compositional matrix adjust.
 Identities = 138/270 (52%), Positives = 178/270 (66%), Gaps = 1/270 (0%)

Query  6    FIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGASA  65
            FIGSEA+ AG ++ HEL ++Y  +   VY+ +R  P+L  R + AWL + R GVIAG  A
Sbjct  8    FIGSEAITAGRLTRHELQRWYQPMFRGVYVSRRSVPTLWDRTVGAWLATRRHGVIAGNVA  67

Query  66   SALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLGR  125
            SALHGA+WVD    +ELI    R  +G+  + E L D E+ R+ GL VTT+ RTA+DLGR
Sbjct  68   SALHGAQWVDVDVAIELISPTTRPQHGLVIRRETLCDDEITRVVGLPVTTLARTAYDLGR  127

Query  126  RPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETWL  185
                G+A+ RLDAL  AT F  +DV  LA++H   RG+R+L   L LVD GA SPKETWL
Sbjct  128  HLSRGEAVARLDALMRATPFSRDDVLLLAKRHAGARGVRRLRDVLPLVDGGAASPKETWL  187

Query  186  RLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVER  245
            RLLLI+AG P P+TQIP++  + +    LDMGWE  M+A EYDG+QHR  R ++VKD  R
Sbjct  188  RLLLIDAGLPVPTTQIPVVHRWRNVG-VLDMGWEKYMVAAEYDGDQHRSDRGRYVKDQRR  246

Query  246  LEYIRRAGWTHIRVLADHKGPDVVRRVRQA  275
            L  +   GW  IRV+A+    DVV RVR A
Sbjct  247  LRKLAELGWIVIRVIAEDNPDDVVNRVRAA  276


>gi|254773599|ref|ZP_05215115.1| hypothetical protein MaviaA2_02830 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=290

 Score =  251 bits (641),  Expect = 8e-65, Method: Compositional matrix adjust.
 Identities = 129/274 (48%), Positives = 181/274 (67%), Gaps = 1/274 (0%)

Query  3    AQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAG  62
            A+PFIGSEA+A+GL++ + L   +  + P+VY+      S   R  +AWLWS R+GV+AG
Sbjct  2    AEPFIGSEAVASGLVTPYALRSRFVRVHPDVYVPAGTALSAGLRARSAWLWSRRRGVVAG  61

Query  63   ASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFD  122
             SA+AL+G KW+DD A  +L++   R P+G++T  + L+  E+Q + G+ VTT  RTA D
Sbjct  62   RSAAALYGTKWIDDRAPAQLLYPYRRPPDGIQTWSDRLVGDEIQTIGGMPVTTPARTALD  121

Query  123  LGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKE  182
            +  R P+ +A+  +DALA AT+ K+ ++  LA ++   RG+ +    L LVD GA+SP+E
Sbjct  122  IACRSPVDKAVAAIDALARATELKVLEIELLADRYRGRRGITRARSVLPLVDAGAESPRE  181

Query  183  TWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKD  242
            TWLRLLL+ AGFPRP TQ+P+   YG     LDMGWEDI LAVEYDG+QHR  R QF KD
Sbjct  182  TWLRLLLLRAGFPRPRTQLPVRQ-YGALIACLDMGWEDIKLAVEYDGDQHRTDRRQFTKD  240

Query  243  VERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAW  276
            + R E +   GWT +RV A+     ++ RV  AW
Sbjct  241  IRRAEVLAELGWTVVRVTAEDTPAGIIARVSTAW  274


>gi|126437575|ref|YP_001073266.1| hypothetical protein Mjls_5011 [Mycobacterium sp. JLS]
 gi|126237375|gb|ABO00776.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=277

 Score =  251 bits (641),  Expect = 9e-65, Method: Compositional matrix adjust.
 Identities = 134/273 (50%), Positives = 178/273 (66%), Gaps = 2/273 (0%)

Query  4    QPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGA  63
            +PFIGSEA+ +G ++ + L   + A+ P+VY     + +  QR  AAWLWS R+GV+AG 
Sbjct  3    EPFIGSEAVTSGALTPYALRSRFRAVHPDVYEPTHAEMTATQRAKAAWLWSRRQGVVAGQ  62

Query  64   SASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDL  123
            SA+ALHGAKWVD  +  E++W N R P GVRT  +  +D EVQ L G+ VTT  RTA DL
Sbjct  63   SAAALHGAKWVD-ASTAEVLWSNRRPPPGVRTWSDRFVDDEVQILGGIRVTTPARTALDL  121

Query  124  GRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKET  183
              R PL +A+  +DALA AT  K+ DV  LA ++P  RG+R     L LVDPGA+SP+ET
Sbjct  122  AARYPLDRAVAAIDALARATHLKVADVTPLAERYPGRRGIRNAHNVLTLVDPGAESPRET  181

Query  184  WLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDV  243
            WLRLL+I  GFP P+TQIP+   YG     LDMGWEDI +A++Y+G  HR   D+F KD+
Sbjct  182  WLRLLVIRNGFPPPTTQIPVYDGYGVLVAVLDMGWEDIKVALDYEGAHHR-GPDRFHKDI  240

Query  244  ERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAW  276
             R + +   GW  IRV +      +VRR++ AW
Sbjct  241  HRHDDVTELGWIDIRVSSRDTEGGIVRRLQAAW  273


>gi|339296524|gb|AEJ48635.1| hypothetical protein CCDC5079_3446 [Mycobacterium tuberculosis 
CCDC5079]
Length=284

 Score =  251 bits (640),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 137/270 (51%), Positives = 178/270 (66%), Gaps = 1/270 (0%)

Query  6    FIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGASA  65
            FIGSEA+ AG ++ HEL ++Y  +   VY+ +R  P+L  R + AWL + R GVIAG +A
Sbjct  8    FIGSEAITAGRLTRHELQRWYQPMFRGVYVSRRSVPTLWDRTVGAWLATRRHGVIAGNAA  67

Query  66   SALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLGR  125
            SALHGA+WVD    +ELI    R  +G+  + E L D E+  + GL VTT+ RTA+DLGR
Sbjct  68   SALHGAQWVDVDVAIELISPTTRPQHGLVIRRETLCDDEITSVVGLPVTTLARTAYDLGR  127

Query  126  RPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETWL  185
                G+A+ RLDAL  AT F  +DV  LA++H   RG+R+L   L LVD GA SPKETWL
Sbjct  128  HLSRGEAVARLDALMRATPFSRDDVLLLAKRHAGARGVRRLRDVLPLVDGGAASPKETWL  187

Query  186  RLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVER  245
            RLLLI+AG P P+TQIP++  + +    LDMGWE  M+A EYDG+QHR  R ++VKD  R
Sbjct  188  RLLLIDAGLPVPTTQIPVVHRWRNVG-VLDMGWEKYMVAAEYDGDQHRSDRGRYVKDQRR  246

Query  246  LEYIRRAGWTHIRVLADHKGPDVVRRVRQA  275
            L  +   GW  IRV+A+    DVV RVR A
Sbjct  247  LRKLAELGWIVIRVIAEDNPDDVVNRVRAA  276


>gi|289571958|ref|ZP_06452185.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289545712|gb|EFD49360.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=296

 Score =  251 bits (640),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 137/270 (51%), Positives = 178/270 (66%), Gaps = 1/270 (0%)

Query  6    FIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGASA  65
            FIGSEA+ AG ++ HEL ++Y  +   VY+ +R  P+L  R + AWL + R GVIAG +A
Sbjct  20   FIGSEAITAGRLTRHELQRWYQPMFRGVYVSRRSVPTLWDRTVGAWLATRRHGVIAGNAA  79

Query  66   SALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLGR  125
            SALHGA+WVD    +ELI    R  +G+  + E L D E+ R+ GL VTT+ RTA+DLGR
Sbjct  80   SALHGAQWVDVDVAIELISPTTRPQHGLVIRRETLCDDEITRVVGLPVTTLARTAYDLGR  139

Query  126  RPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETWL  185
                 +A+ RLDAL  AT F  +DV  LA++H   RG+R+L   L LVD GA SPKETWL
Sbjct  140  HLSRDEAVARLDALMRATPFSRDDVLLLAKRHAGARGVRRLRDVLPLVDGGAASPKETWL  199

Query  186  RLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVER  245
            RLLLI+AG P P+TQIP++  + +    LDMGWE  M+A EYDG+QHR  R ++VKD  R
Sbjct  200  RLLLIDAGLPVPTTQIPVVHRWRNVG-VLDMGWEKYMVAAEYDGDQHRSDRGRYVKDQRR  258

Query  246  LEYIRRAGWTHIRVLADHKGPDVVRRVRQA  275
            L  +   GW  IRV+A+    DVV RVR A
Sbjct  259  LRKLAELGWIVIRVIAEDNPDDVVNRVRAA  288


>gi|118463860|ref|YP_879922.1| hypothetical protein MAV_0642 [Mycobacterium avium 104]
 gi|118165147|gb|ABK66044.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=290

 Score =  251 bits (640),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 129/274 (48%), Positives = 181/274 (67%), Gaps = 1/274 (0%)

Query  3    AQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAG  62
            A+PFIGSEA+A+GL++ + L   +  + P+VY+      S   R  +AWLWS R+GV+AG
Sbjct  2    AEPFIGSEAVASGLVTPYALRSRFVRVHPDVYVPAGTALSAGLRARSAWLWSRRRGVVAG  61

Query  63   ASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFD  122
             SA+AL+G KW+DD A  +L++   R P+G++T  + L+  E+Q + G+ VTT  RTA D
Sbjct  62   RSAAALYGTKWIDDRAPAQLLYPYRRPPDGIQTWSDRLVGDEIQTIGGMPVTTPARTALD  121

Query  123  LGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKE  182
            +  R P+ +A+  +DALA AT+ K+ ++  LA ++   RG+ +    L LVD GA+SP+E
Sbjct  122  IACRSPVDKAVAAIDALARATELKVLEIELLADRYRGRRGITRARNVLPLVDAGAESPRE  181

Query  183  TWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKD  242
            TWLRLLL+ AGFPRP TQ+P+   YG     LDMGWEDI LAVEYDG+QHR  R QF KD
Sbjct  182  TWLRLLLLRAGFPRPRTQLPVRQ-YGALIACLDMGWEDIKLAVEYDGDQHRTDRRQFTKD  240

Query  243  VERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAW  276
            + R E +   GWT +RV A+     ++ RV  AW
Sbjct  241  IRRAEVLAELGWTVVRVTAEDTPAGIIARVPTAW  274


>gi|289763695|ref|ZP_06523073.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289711201|gb|EFD75217.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
Length=280

 Score =  250 bits (638),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 130/278 (47%), Positives = 175/278 (63%), Gaps = 1/278 (0%)

Query  4    QPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLK-PSLRQRVIAAWLWSGRKGVIAG  62
            +PF+GSEA+A+G ++ H L   Y  I P+VY+       + +     AWLWS   GVIAG
Sbjct  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWKSAPQPAWLWSRGGGVIAG  62

Query  63   ASASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFD  122
             SA+A+HGAKWVD     EL++ + R P G+ T  + + D E+Q + G+  TT  RTA D
Sbjct  63   KSAAAMHGAKWVDARKGAELLYDHRRRPAGIHTWSDRVADDEIQPISGMNTTTPARTALD  122

Query  123  LGRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKE  182
            L RR P+G+A+  +DALA ATD K+ DV  LA ++  +RG+R    ALDLVDPGA+SP+E
Sbjct  123  LARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRE  182

Query  183  TWLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKD  242
            TWLRLLLI AGFPRP TQIP+   YG     +DMGW  I + V+Y+G+ HR  R  F KD
Sbjct  183  TWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKD  242

Query  243  VERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLT  280
            ++R E +   GWT +RV  +     ++ RV  AW   T
Sbjct  243  IKRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  280


>gi|118619802|ref|YP_908134.1| hypothetical protein MUL_4737 [Mycobacterium ulcerans Agy99]
 gi|118571912|gb|ABL06663.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=292

 Score =  249 bits (637),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 134/274 (49%), Positives = 176/274 (65%), Gaps = 9/274 (3%)

Query  6    FIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGASA  65
            F+GS A+  G +S + L   + AI P+VYL     PS R R  AAWLW+GR+GV+ G +A
Sbjct  15   FVGSGAVRRGRLSPYRLRTEFRAIYPDVYLPAHAAPSFRTRCKAAWLWTGRRGVLGGLAA  74

Query  66   SALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLGR  125
            + LHG+ W+ D   VELIWRN   P GV T+++ +   EV R+ GL VTT+ RTAFDLGR
Sbjct  75   AGLHGSDWIGDDEPVELIWRNPHPPAGVITRNQRIEPDEVTRVAGLAVTTLARTAFDLGR  134

Query  126  RPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETWL  185
            + P G+++ RLDAL  AT F   DV  LA+++   RGLR+L   L LVD GA SP+E+WL
Sbjct  135  QLPGGESVARLDALMRATAFSGEDVLLLAKRYSGARGLRRLRATLPLVDAGAASPRESWL  194

Query  186  RLLLINAGFPRPSTQIPLLGVYGHPKY----FLDMGWEDIMLAVEYDGEQHRLSRDQFVK  241
            R++LI+AG P P TQIP+     H  +     LDMGW+   +A EYDG+QHR  R Q+ +
Sbjct  195  RMVLIDAGLPVPVTQIPV-----HQNWRLVAVLDMGWQKYQVAAEYDGDQHRFDRRQYAR  249

Query  242  DVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQA  275
            +  RL  +   GW  IRV+A     DVVRRVRQA
Sbjct  250  EQWRLRKLDELGWIVIRVIAGDAPEDVVRRVRQA  283


>gi|120402730|ref|YP_952559.1| hypothetical protein Mvan_1730 [Mycobacterium vanbaalenii PYR-1]
 gi|119955548|gb|ABM12553.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=288

 Score =  249 bits (636),  Expect = 4e-64, Method: Compositional matrix adjust.
 Identities = 130/271 (48%), Positives = 176/271 (65%), Gaps = 1/271 (0%)

Query  6    FIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGASA  65
             +GSEA+A GL++   L   Y+ + PNVY+ +    SL    + AWLWSGR+ ++ G +A
Sbjct  5    ILGSEAIADGLVTSGRLRFGYSRLYPNVYVPRGQPQSLIDNTVGAWLWSGRRAIVTGRAA  64

Query  66   SALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLGR  125
            +ALHGA+WV + A VEL +   R P G+  +DE +   EV ++  L V    RTAFDLGR
Sbjct  65   AALHGARWVSEKARVELNYNCRRPPKGIVCRDERIGCDEVIQVGELAVAAAHRTAFDLGR  124

Query  126  RPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETWL  185
              PL  A+  LDALANAT      V  L  ++   RG+++L  ALDL+D GAQSP+ETWL
Sbjct  125  HLPLNSAVVHLDALANATGLTRERVLPLLDEYRGARGMKKLRTALDLMDGGAQSPRETWL  184

Query  186  RLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVER  245
            RLLL+   FPRP+TQIPL    G P  +LDMGWED+ +AVEYDGE H+ +RDQ++ D +R
Sbjct  185  RLLLMK-DFPRPTTQIPLFNSRGAPFAYLDMGWEDLKIAVEYDGEHHQKNRDQYIWDEQR  243

Query  246  LEYIRRAGWTHIRVLADHKGPDVVRRVRQAW  276
            L  IR   W HI+V+ + +  DV  RV++AW
Sbjct  244  LRLIRARDWLHIKVIKEDEPDDVTARVKRAW  274


>gi|108801592|ref|YP_641789.1| hypothetical protein Mmcs_4629 [Mycobacterium sp. MCS]
 gi|119870746|ref|YP_940698.1| hypothetical protein Mkms_4717 [Mycobacterium sp. KMS]
 gi|108772011|gb|ABG10733.1| conserved hypothetical protein [Mycobacterium sp. MCS]
 gi|119696835|gb|ABL93908.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=277

 Score =  248 bits (634),  Expect = 6e-64, Method: Compositional matrix adjust.
 Identities = 133/273 (49%), Positives = 176/273 (65%), Gaps = 2/273 (0%)

Query  4    QPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGA  63
            +PFIGSEA+ +G ++ + L   + A+ P+VY+    + +  QR  AAWLWS R GV+AG 
Sbjct  3    EPFIGSEAVTSGALTPYALRSRFRAVHPDVYVPTHAEMTATQRAKAAWLWSRRHGVVAGQ  62

Query  64   SASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDL  123
            SA+ALHGAKWVD  +  E++W N R P GVRT  +   D EVQ L G+ VTT  RTA D 
Sbjct  63   SAAALHGAKWVDA-STAEVLWSNRRPPPGVRTWSDRFADDEVQILGGIRVTTPARTALDP  121

Query  124  GRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKET  183
              R PL +A+  +DALA AT  K+ DV +LA ++P  RG+R     L LVDPGA+SP+ET
Sbjct  122  AARYPLDRAVAAIDALARATHLKVADVTQLAERYPGRRGIRNAHNVLPLVDPGAESPRET  181

Query  184  WLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDV  243
            WLRLL I  GFP P+TQIP+   YG     LDMGWEDI +A++Y+G  HR   D+F KD+
Sbjct  182  WLRLLAIRNGFPPPTTQIPVYDGYGVLVAVLDMGWEDIKVALDYEGAHHR-GPDRFHKDI  240

Query  244  ERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAW  276
             R + +   GW  IRV +      +VRR++ AW
Sbjct  241  HRHDDVTELGWIDIRVSSRDTEGGIVRRLQAAW  273


>gi|254822601|ref|ZP_05227602.1| hypothetical protein MintA_21909 [Mycobacterium intracellulare 
ATCC 13950]
Length=278

 Score =  248 bits (633),  Expect = 8e-64, Method: Compositional matrix adjust.
 Identities = 130/256 (51%), Positives = 175/256 (69%), Gaps = 1/256 (0%)

Query  4    QPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGA  63
            +PFIGSEALAAG ++ + L   + A+ P+VY+D   + +  +R  AAWLWS R+G++AG 
Sbjct  3    EPFIGSEALAAGTLTRYRLRSRFVALHPDVYVDPATELTATRRACAAWLWSRRRGIVAGR  62

Query  64   SASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDL  123
            SASALHGAKWVD  A  +L++++ R P G+ T  + L + E+Q + GL VTT  RTA DL
Sbjct  63   SASALHGAKWVDHRAPAQLVYQHRRPPAGINTWSDSLSEDEIQTIAGLRVTTPARTALDL  122

Query  124  GRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKET  183
              R P+ +A+  +DALA ATD K+++V  L  ++   RG+ +   AL LVD GA+SP+ET
Sbjct  123  ACRYPVDRAVAAIDALARATDLKVSEVDSLGERYRGRRGIARARVALPLVDKGAESPRET  182

Query  184  WLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDV  243
            WLRLLLI AGFPRP TQIP+   YG     LDMGW+DI LAVEY+G+ HR  + QF KD+
Sbjct  183  WLRLLLIRAGFPRPQTQIPVYD-YGALIACLDMGWQDIKLAVEYEGDHHRADQRQFNKDI  241

Query  244  ERLEYIRRAGWTHIRV  259
             R E +   GWT +RV
Sbjct  242  RRAETLAEIGWTVVRV  257


>gi|296171938|ref|ZP_06852983.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295893871|gb|EFG73643.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=282

 Score =  246 bits (628),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 141/273 (52%), Positives = 183/273 (68%), Gaps = 13/273 (4%)

Query  6    FIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGASA  65
            FIGSEA+  G +S ++L   + AI P+VYL +   PSLR R   AWLWSGR+G++AG +A
Sbjct  5    FIGSEAVRQGRLSPYQLRVGFRAIYPDVYLGEAATPSLRTRCAGAWLWSGRRGIVAGLAA  64

Query  66   SALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLGR  125
            +ALHG+ W+DD A +ELIW N  AP GV T+++ +   E+ R  GL VTT  RTA+D+ R
Sbjct  65   AALHGSDWIDDDAPIELIWGNQHAPTGVITRNQRVEPDEITRAAGLPVTTAARTAYDVAR  124

Query  126  RPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETWL  185
            + P  +A+ RLDAL  A  F + +V  LA+++P  RGL++L  AL LVDPGA SPKETWL
Sbjct  125  QFPRDEAVARLDALLRARPFCLEEVPLLAKRYPRARGLQRLRAALPLVDPGAASPKETWL  184

Query  186  RLLLINAGFPRPSTQIP------LLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQF  239
            RLLLI+AGFP P TQIP      L+GV       LDMGWE   +A EYDG+QHR SR Q+
Sbjct  185  RLLLIDAGFPAPETQIPVNDGWRLVGV-------LDMGWERYKVAAEYDGDQHRTSRRQY  237

Query  240  VKDVERLEYIRRAGWTHIRVLADHKGPDVVRRV  272
             +D  RL  +   GW  +RV+A+ K  DVV RV
Sbjct  238  ARDHWRLRKMEELGWIVVRVIAEDKPQDVVARV  270



Lambda     K      H
   0.322    0.138    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 452136608080


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40