BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1081c Length=144 Score E Sequences producing significant alignments: (Bits) Value gi|15608221|ref|NP_215597.1| hypothetical protein Rv1081c [Mycob... 278 3e-73 gi|167967358|ref|ZP_02549635.1| hypothetical protein MtubH3_0469... 277 3e-73 gi|15840517|ref|NP_335554.1| hypothetical protein MT1112 [Mycoba... 277 4e-73 gi|294993264|ref|ZP_06798955.1| hypothetical protein Mtub2_01842... 216 7e-55 gi|296169946|ref|ZP_06851555.1| conserved hypothetical protein [... 201 4e-50 gi|342861672|ref|ZP_08718318.1| hypothetical protein MCOL_22401 ... 192 1e-47 gi|118616089|ref|YP_904421.1| hypothetical protein MUL_0199 [Myc... 180 5e-44 gi|183984357|ref|YP_001852648.1| hypothetical protein MMAR_4386 ... 180 6e-44 gi|15828285|ref|NP_302548.1| hypothetical protein ML2392 [Mycoba... 171 2e-41 gi|240170286|ref|ZP_04748945.1| hypothetical protein MkanA1_1331... 168 3e-40 gi|118466315|ref|YP_880451.1| hypothetical protein MAV_1205 [Myc... 162 1e-38 gi|254774088|ref|ZP_05215604.1| hypothetical protein MaviaA2_053... 161 3e-38 gi|41407126|ref|NP_959962.1| hypothetical protein MAP1028c [Myco... 157 5e-37 gi|254820659|ref|ZP_05225660.1| hypothetical protein MintA_12061... 155 1e-36 gi|333989667|ref|YP_004522281.1| hypothetical protein JDM601_102... 153 9e-36 gi|145222637|ref|YP_001133315.1| hypothetical protein Mflv_2049 ... 152 2e-35 gi|118472280|ref|YP_889508.1| hypothetical protein MSMEG_5262 [M... 147 6e-34 gi|108801107|ref|YP_641304.1| hypothetical protein Mmcs_4143 [My... 140 9e-32 gi|254550072|ref|ZP_05140519.1| hypothetical protein Mtube_06379... 138 2e-31 gi|169628295|ref|YP_001701944.1| hypothetical protein MAB_1202c ... 137 4e-31 gi|343925084|ref|ZP_08764616.1| hypothetical protein GOALK_033_0... 127 4e-28 gi|312138730|ref|YP_004006066.1| membrane protein [Rhodococcus e... 124 5e-27 gi|325676578|ref|ZP_08156256.1| hypothetical protein HMPREF0724_... 124 5e-27 gi|254550073|ref|ZP_05140520.1| hypothetical protein Mtube_06384... 113 1e-23 gi|229491942|ref|ZP_04385762.1| conserved hypothetical protein [... 113 1e-23 gi|226307747|ref|YP_002767707.1| hypothetical protein RER_42600 ... 112 1e-23 gi|326381822|ref|ZP_08203515.1| hypothetical protein SCNU_02712 ... 112 2e-23 gi|54026799|ref|YP_121041.1| hypothetical protein nfa48250 [Noca... 111 4e-23 gi|262201593|ref|YP_003272801.1| hypothetical protein Gbro_1638 ... 106 1e-21 gi|333921081|ref|YP_004494662.1| hypothetical protein AS9A_3421 ... 106 1e-21 gi|300789905|ref|YP_003770196.1| hypothetical protein AMED_8091 ... 99.4 2e-19 gi|256374857|ref|YP_003098517.1| hypothetical protein Amir_0708 ... 97.4 6e-19 gi|226365322|ref|YP_002783105.1| hypothetical protein ROP_59130 ... 95.9 2e-18 gi|111022814|ref|YP_705786.1| hypothetical protein RHA1_ro05851 ... 94.7 4e-18 gi|302530116|ref|ZP_07282458.1| predicted protein [Streptomyces ... 94.4 5e-18 gi|19552212|ref|NP_600214.1| hypothetical protein NCgl0947 [Cory... 92.4 2e-17 gi|296140829|ref|YP_003648072.1| hypothetical protein Tpau_3146 ... 87.0 8e-16 gi|319949699|ref|ZP_08023730.1| hypothetical protein ES5_09525 [... 86.3 1e-15 gi|257057148|ref|YP_003134980.1| hypothetical protein Svir_31800... 84.0 7e-15 gi|62389877|ref|YP_225279.1| hypothetical protein cg1125 [Coryne... 81.3 5e-14 gi|25027607|ref|NP_737661.1| hypothetical protein CE1051 [Coryne... 79.3 2e-13 gi|134097506|ref|YP_001103167.1| hypothetical protein SACE_0908 ... 78.2 4e-13 gi|336326158|ref|YP_004606124.1| hypothetical protein CRES_1607 ... 75.5 3e-12 gi|227487835|ref|ZP_03918151.1| conserved hypothetical protein [... 74.3 5e-12 gi|38233522|ref|NP_939289.1| hypothetical protein DIP0926 [Coryn... 73.2 1e-11 gi|227542475|ref|ZP_03972524.1| conserved hypothetical protein [... 72.8 2e-11 gi|172040279|ref|YP_001799993.1| putative secreted protein [Cory... 71.6 4e-11 gi|300858140|ref|YP_003783123.1| hypothetical protein cpfrc_0072... 70.1 1e-10 gi|340794905|ref|YP_004760368.1| hypothetical protein CVAR_1942 ... 66.2 1e-09 gi|227832752|ref|YP_002834459.1| hypothetical protein cauri_0924... 65.5 2e-09 >gi|15608221|ref|NP_215597.1| hypothetical protein Rv1081c [Mycobacterium tuberculosis H37Rv] gi|31792272|ref|NP_854765.1| hypothetical protein Mb1110c [Mycobacterium bovis AF2122/97] gi|121637010|ref|YP_977233.1| hypothetical protein BCG_1139c [Mycobacterium bovis BCG str. Pasteur 1173P2] 51 more sequence titles Length=144 Score = 278 bits (710), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 144/144 (100%), Positives = 144/144 (100%), Gaps = 0/144 (0%) Query 1 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVG 60 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVG Sbjct 1 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVG 60 Query 61 YRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVK 120 YRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVK Sbjct 61 YRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVK 120 Query 121 SSQPPVMADVYGCGTEVPSYLRLP 144 SSQPPVMADVYGCGTEVPSYLRLP Sbjct 121 SSQPPVMADVYGCGTEVPSYLRLP 144 >gi|167967358|ref|ZP_02549635.1| hypothetical protein MtubH3_04692 [Mycobacterium tuberculosis H37Ra] Length=148 Score = 277 bits (709), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 144/144 (100%), Positives = 144/144 (100%), Gaps = 0/144 (0%) Query 1 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVG 60 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVG Sbjct 5 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVG 64 Query 61 YRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVK 120 YRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVK Sbjct 65 YRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVK 124 Query 121 SSQPPVMADVYGCGTEVPSYLRLP 144 SSQPPVMADVYGCGTEVPSYLRLP Sbjct 125 SSQPPVMADVYGCGTEVPSYLRLP 148 >gi|15840517|ref|NP_335554.1| hypothetical protein MT1112 [Mycobacterium tuberculosis CDC1551] gi|253799883|ref|YP_003032884.1| hypothetical protein TBMG_02906 [Mycobacterium tuberculosis KZN 1435] gi|308231726|ref|ZP_07413566.2| conserved membrane protein [Mycobacterium tuberculosis SUMu001] 20 more sequence titles Length=153 Score = 277 bits (708), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 144/144 (100%), Positives = 144/144 (100%), Gaps = 0/144 (0%) Query 1 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVG 60 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVG Sbjct 10 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVG 69 Query 61 YRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVK 120 YRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVK Sbjct 70 YRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVK 129 Query 121 SSQPPVMADVYGCGTEVPSYLRLP 144 SSQPPVMADVYGCGTEVPSYLRLP Sbjct 130 SSQPPVMADVYGCGTEVPSYLRLP 153 >gi|294993264|ref|ZP_06798955.1| hypothetical protein Mtub2_01842 [Mycobacterium tuberculosis 210] gi|339297718|gb|AEJ49828.1| hypothetical protein CCDC5180_0991 [Mycobacterium tuberculosis CCDC5180] Length=113 Score = 216 bits (551), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 112/113 (99%), Positives = 113/113 (100%), Gaps = 0/113 (0%) Query 32 VLVAAAGIVIAVIGYQRISTSAVTGSLVGYRLVDDETASVTISVTRSDPSRPVACIVRVR 91 +LVAAAGIVIAVIGYQRISTSAVTGSLVGYRLVDDETASVTISVTRSDPSRPVACIVRVR Sbjct 1 MLVAAAGIVIAVIGYQRISTSAVTGSLVGYRLVDDETASVTISVTRSDPSRPVACIVRVR 60 Query 92 ATNGSETGRRELLVPPSEATTVQVTTTVKSSQPPVMADVYGCGTEVPSYLRLP 144 ATNGSETGRRELLVPPSEATTVQVTTTVKSSQPPVMADVYGCGTEVPSYLRLP Sbjct 61 ATNGSETGRRELLVPPSEATTVQVTTTVKSSQPPVMADVYGCGTEVPSYLRLP 113 >gi|296169946|ref|ZP_06851555.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895410|gb|EFG75115.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=141 Score = 201 bits (510), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 104/142 (74%), Positives = 120/142 (85%), Gaps = 3/142 (2%) Query 1 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVG 60 MT T PRP+ARYGR SR RR V ALG LV AAG+VIAV+ Y R+ T AVTG+L G Sbjct 1 MTDTSPPRPEARYGR---SRVPRRWVIGALGALVVAAGLVIAVVSYHRLGTGAVTGTLAG 57 Query 61 YRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVK 120 Y+L+DDETASVTISVTRSDPSRPV CIVRVRA +GSE+GRRE+LVPPS A TVQ+TTTVK Sbjct 58 YQLIDDETASVTISVTRSDPSRPVDCIVRVRAKDGSESGRREVLVPPSGAKTVQITTTVK 117 Query 121 SSQPPVMADVYGCGTEVPSYLR 142 SS+PP+MAD+YGCGT+VP+YLR Sbjct 118 SSKPPMMADIYGCGTDVPAYLR 139 >gi|342861672|ref|ZP_08718318.1| hypothetical protein MCOL_22401 [Mycobacterium colombiense CECT 3035] gi|342130806|gb|EGT84102.1| hypothetical protein MCOL_22401 [Mycobacterium colombiense CECT 3035] Length=144 Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 107/142 (76%), Positives = 122/142 (86%), Gaps = 0/142 (0%) Query 1 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVG 60 MT TPI RP+ARYGR RLSR RR V ALGVLV AG+VIAVIGY R TS V G++ G Sbjct 1 MTETPISRPEARYGRSRLSRIPRRWVIAALGVLVVVAGLVIAVIGYHRFGTSDVKGTMAG 60 Query 61 YRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVK 120 YR++DD+TAS+TISVTRSDPSRPV CIVRVRA +GSETGRRELLVPPS+A TVQVTTTVK Sbjct 61 YRVIDDQTASITISVTRSDPSRPVDCIVRVRAQDGSETGRRELLVPPSDAATVQVTTTVK 120 Query 121 SSQPPVMADVYGCGTEVPSYLR 142 S +PPV+AD+YGCGT+VP+YLR Sbjct 121 SFEPPVVADIYGCGTDVPAYLR 142 >gi|118616089|ref|YP_904421.1| hypothetical protein MUL_0199 [Mycobacterium ulcerans Agy99] gi|118568199|gb|ABL02950.1| conserved membrane protein [Mycobacterium ulcerans Agy99] Length=144 Score = 180 bits (457), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 108/144 (75%), Positives = 125/144 (87%), Gaps = 0/144 (0%) Query 1 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVG 60 M PI RP+ARYGR RLS R+RR + IAL VLV AG V+AVIGYQRI T+AVTG L G Sbjct 1 MNPAPISRPEARYGRSRLSGRSRRYIFIALAVLVVVAGTVLAVIGYQRIVTNAVTGKLAG 60 Query 61 YRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVK 120 YR++D++TASVTISVTRSDPSRPV CIVRVRA +GSETGRRE+LVPPS+ TTVQVTTT+K Sbjct 61 YRVIDEQTASVTISVTRSDPSRPVDCIVRVRAKDGSETGRREVLVPPSDQTTVQVTTTLK 120 Query 121 SSQPPVMADVYGCGTEVPSYLRLP 144 SS+PP+MADVYGCGT+VP+YLR P Sbjct 121 SSKPPLMADVYGCGTDVPAYLRSP 144 >gi|183984357|ref|YP_001852648.1| hypothetical protein MMAR_4386 [Mycobacterium marinum M] gi|183177683|gb|ACC42793.1| conserved membrane protein [Mycobacterium marinum M] Length=144 Score = 180 bits (456), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 108/144 (75%), Positives = 125/144 (87%), Gaps = 0/144 (0%) Query 1 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVG 60 M PI RP+ARYGR RLS R+RR + IAL VLV AG V+AVIGYQRI T+AVTG L G Sbjct 1 MNPAPISRPEARYGRSRLSGRSRRYILIALAVLVVVAGTVLAVIGYQRIVTNAVTGKLAG 60 Query 61 YRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVK 120 YR++D++TASVTISVTRSDPSRPV CIVRVRA +GSETGRRE+LVPPS+ TTVQVTTT+K Sbjct 61 YRVIDEQTASVTISVTRSDPSRPVDCIVRVRAKDGSETGRREVLVPPSDQTTVQVTTTLK 120 Query 121 SSQPPVMADVYGCGTEVPSYLRLP 144 SS+PP+MADVYGCGT+VP+YLR P Sbjct 121 SSKPPLMADVYGCGTDVPAYLRSP 144 >gi|15828285|ref|NP_302548.1| hypothetical protein ML2392 [Mycobacterium leprae TN] gi|221230762|ref|YP_002504178.1| hypothetical protein MLBr_02392 [Mycobacterium leprae Br4923] gi|13093978|emb|CAC31908.1| conserved membrane protein [Mycobacterium leprae] gi|219933869|emb|CAR72490.1| conserved membrane protein [Mycobacterium leprae Br4923] Length=144 Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 98/142 (70%), Positives = 110/142 (78%), Gaps = 0/142 (0%) Query 1 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVG 60 M P + RYGR RL R+R R IAL VL AA IAVIGYQR+ TS V GSL Sbjct 1 MNQAFTPLTETRYGRSRLPGRSRHRGVIALTVLAVAASTGIAVIGYQRLGTSDVAGSLAS 60 Query 61 YRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVK 120 YR++DDET SVTISV RSDPSRPV CIVRVRA +GSETGRRE+LV P+EATTVQV TTVK Sbjct 61 YRVLDDETVSVTISVMRSDPSRPVDCIVRVRAKDGSETGRREVLVAPAEATTVQVVTTVK 120 Query 121 SSQPPVMADVYGCGTEVPSYLR 142 S++PPVMAD+YGCGT+VP YLR Sbjct 121 SARPPVMADIYGCGTDVPGYLR 142 >gi|240170286|ref|ZP_04748945.1| hypothetical protein MkanA1_13318 [Mycobacterium kansasii ATCC 12478] Length=144 Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 99/142 (70%), Positives = 120/142 (85%), Gaps = 0/142 (0%) Query 1 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVG 60 M P+ RP+ARYGR RLS R+RRR+AIAL + AAG+ +A + YQRI T+AVTGSL Sbjct 1 MKPVPVSRPEARYGRARLSSRSRRRLAIALSAVAVAAGLAVAFVAYQRIGTNAVTGSLAA 60 Query 61 YRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVK 120 YR++D+ETASVTISVTR DPS+PV CIVRVRA +GSETGRRE+LV PS+ TVQVTTT+K Sbjct 61 YRVIDNETASVTISVTRKDPSQPVDCIVRVRAHDGSETGRREVLVAPSDQNTVQVTTTLK 120 Query 121 SSQPPVMADVYGCGTEVPSYLR 142 SS+PPVMAD+YGCGT+VP+YLR Sbjct 121 SSKPPVMADIYGCGTDVPAYLR 142 >gi|118466315|ref|YP_880451.1| hypothetical protein MAV_1205 [Mycobacterium avium 104] gi|118167602|gb|ABK68499.1| conserved hypothetical protein [Mycobacterium avium 104] Length=141 Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 100/142 (71%), Positives = 115/142 (81%), Gaps = 3/142 (2%) Query 1 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVG 60 MT T RP+ RYGR LSR RR V ALGVLV AAG+ +AV+GY R TS V ++VG Sbjct 1 MTET---RPNERYGRSALSRIPRRWVIAALGVLVVAAGLAVAVVGYHRFGTSDVKATMVG 57 Query 61 YRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVK 120 YR++DD+TAS+TISVTRSDPSRPV CIVRVR+ +G ETGRRELLVPPS A TV+VTTTVK Sbjct 58 YRVLDDQTASITISVTRSDPSRPVDCIVRVRSHDGGETGRRELLVPPSGAATVEVTTTVK 117 Query 121 SSQPPVMADVYGCGTEVPSYLR 142 S QPPV+ADVYGCGT+VP YLR Sbjct 118 SFQPPVVADVYGCGTDVPGYLR 139 >gi|254774088|ref|ZP_05215604.1| hypothetical protein MaviaA2_05365 [Mycobacterium avium subsp. avium ATCC 25291] Length=141 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 100/142 (71%), Positives = 114/142 (81%), Gaps = 3/142 (2%) Query 1 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVG 60 MT T RP RYGR LSR RR V ALGVLV AAG+ +AV+GY R TS V ++VG Sbjct 1 MTET---RPSERYGRSPLSRIPRRWVIAALGVLVVAAGLAVAVVGYHRFGTSDVKATMVG 57 Query 61 YRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVK 120 YR++DD+TAS+TISVTRSDPSRPV CIVRVR+ +G ETGRRELLVPPS A TV+VTTTVK Sbjct 58 YRVLDDQTASITISVTRSDPSRPVDCIVRVRSHDGGETGRRELLVPPSGAATVEVTTTVK 117 Query 121 SSQPPVMADVYGCGTEVPSYLR 142 S QPPV+ADVYGCGT+VP YLR Sbjct 118 SFQPPVVADVYGCGTDVPGYLR 139 >gi|41407126|ref|NP_959962.1| hypothetical protein MAP1028c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395477|gb|AAS03345.1| hypothetical protein MAP_1028c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336461451|gb|EGO40321.1| hypothetical protein MAPs_30310 [Mycobacterium avium subsp. paratuberculosis S397] Length=141 Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 99/142 (70%), Positives = 113/142 (80%), Gaps = 3/142 (2%) Query 1 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVG 60 MT T RP RYGR LSR RR V ALGVLV AAG+ +AV+GY R TS V ++VG Sbjct 1 MTET---RPSERYGRSPLSRIPRRWVIAALGVLVVAAGLAVAVVGYHRFGTSDVKATMVG 57 Query 61 YRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVK 120 YR++DD+TAS+TISVTRSDPSRPV CIVRVR+ +G ETGRRELLV PS A TV+VTTTVK Sbjct 58 YRVLDDQTASITISVTRSDPSRPVDCIVRVRSHDGGETGRRELLVLPSGAATVEVTTTVK 117 Query 121 SSQPPVMADVYGCGTEVPSYLR 142 S QPPV+ADVYGCGT+VP YLR Sbjct 118 SFQPPVVADVYGCGTDVPGYLR 139 >gi|254820659|ref|ZP_05225660.1| hypothetical protein MintA_12061 [Mycobacterium intracellulare ATCC 13950] Length=119 Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 74/97 (77%), Positives = 87/97 (90%), Gaps = 0/97 (0%) Query 46 YQRISTSAVTGSLVGYRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLV 105 Y R TS V G+L GYR++D++TAS+TISVTRSDPSRPV CIVRVR+ +GSETGRRELLV Sbjct 21 YHRFGTSDVKGTLAGYRVIDEQTASITISVTRSDPSRPVDCIVRVRSADGSETGRRELLV 80 Query 106 PPSEATTVQVTTTVKSSQPPVMADVYGCGTEVPSYLR 142 PPS+A TVQVTTTVKSSQPP +AD+YGCGT+VP+YLR Sbjct 81 PPSDAATVQVTTTVKSSQPPAVADIYGCGTDVPAYLR 117 >gi|333989667|ref|YP_004522281.1| hypothetical protein JDM601_1027 [Mycobacterium sp. JDM601] gi|333485635|gb|AEF35027.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=140 Score = 153 bits (386), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 85/134 (64%), Positives = 103/134 (77%), Gaps = 0/134 (0%) Query 11 ARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVGYRLVDDETAS 70 ARYG R RR +AI LG L A +AV+G+QR++T+ V G L GY +VDD+T + Sbjct 7 ARYGDTRGRALPRRLLAIMLGALAVATAAAVAVLGFQRLTTADVKGELYGYEVVDDQTVT 66 Query 71 VTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQPPVMADV 130 V ISVTRSDPSRP CIVRVRA +GSETGRRE+L+PPSE++TVQVTT VKSSQPP+M D+ Sbjct 67 VKISVTRSDPSRPAVCIVRVRAGDGSETGRREVLIPPSESSTVQVTTIVKSSQPPLMGDI 126 Query 131 YGCGTEVPSYLRLP 144 YGCG +VP YLR P Sbjct 127 YGCGPDVPDYLRSP 140 >gi|145222637|ref|YP_001133315.1| hypothetical protein Mflv_2049 [Mycobacterium gilvum PYR-GCK] gi|315443102|ref|YP_004075981.1| hypothetical protein Mspyr1_14730 [Mycobacterium sp. Spyr1] gi|145215123|gb|ABP44527.1| putative conserved membrane protein [Mycobacterium gilvum PYR-GCK] gi|315261405|gb|ADT98146.1| hypothetical protein Mspyr1_14730 [Mycobacterium sp. Spyr1] Length=144 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 82/141 (59%), Positives = 97/141 (69%), Gaps = 0/141 (0%) Query 1 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVG 60 M + I RP ARYGR +SRR RR +A L LV G+ +A + + R +S V G + G Sbjct 1 MQNEMIERPTARYGRQTMSRRTRRWIAAGLTALVVVIGVAVAAVAFSRFGSSDVKGEMAG 60 Query 61 YRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVK 120 Y LVD T VTISVTR DPSRP CIVR R+ +G ETGRRELLVPPS TTVQV TTVK Sbjct 61 YELVDPHTVDVTISVTRDDPSRPAVCIVRARSRDGDETGRRELLVPPSSETTVQVRTTVK 120 Query 121 SSQPPVMADVYGCGTEVPSYL 141 SS+P V+ D+YGCG +VP YL Sbjct 121 SSRPAVIGDIYGCGIDVPDYL 141 >gi|118472280|ref|YP_889508.1| hypothetical protein MSMEG_5262 [Mycobacterium smegmatis str. MC2 155] gi|118173567|gb|ABK74463.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=142 Score = 147 bits (371), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 80/139 (58%), Positives = 98/139 (71%), Gaps = 0/139 (0%) Query 6 IPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVGYRLVD 65 I RP ARYG R +RR + IA+ LV AG+++AV+ YQR + V G L GY+L+D Sbjct 2 IERPAARYGSREQPRLSRRWILIAVAALVLVAGVIVAVVAYQRFGSGEVKGELTGYQLLD 61 Query 66 DETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQPP 125 DET VTI V R DPS+PV CIVR R+ +GSETGRRE+LVPP VQVT VKS++ P Sbjct 62 DETVQVTIGVERPDPSKPVVCIVRARSKDGSETGRREILVPPGSDRVVQVTAEVKSTRKP 121 Query 126 VMADVYGCGTEVPSYLRLP 144 VM D+YGCGT+VPSYL P Sbjct 122 VMGDIYGCGTDVPSYLVTP 140 >gi|108801107|ref|YP_641304.1| hypothetical protein Mmcs_4143 [Mycobacterium sp. MCS] gi|119870248|ref|YP_940200.1| hypothetical protein Mkms_4218 [Mycobacterium sp. KMS] gi|126436945|ref|YP_001072636.1| hypothetical protein Mjls_4374 [Mycobacterium sp. JLS] gi|108771526|gb|ABG10248.1| putative conserved membrane protein [Mycobacterium sp. MCS] gi|119696337|gb|ABL93410.1| putative conserved membrane protein [Mycobacterium sp. KMS] gi|126236745|gb|ABO00146.1| putative conserved membrane protein [Mycobacterium sp. JLS] Length=140 Score = 140 bits (352), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 84/139 (61%), Positives = 102/139 (74%), Gaps = 0/139 (0%) Query 6 IPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVGYRLVD 65 I RP ARYGR R+SRR RR VA L V AG+++A++ QR+ T V G L YR++D Sbjct 2 IERPAARYGRQRVSRRTRRLVAAVLAAGVVVAGVILAIVASQRLGTQEVEGELGAYRIID 61 Query 66 DETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQPP 125 D T VT+SVTR DPSRP CIVR R+ +GSETGRRE+LVPPSE TVQVTT V++S+PP Sbjct 62 DRTVEVTVSVTREDPSRPAVCIVRARSKDGSETGRREILVPPSEQATVQVTTVVEASKPP 121 Query 126 VMADVYGCGTEVPSYLRLP 144 V+ DVYGCG +VP YL P Sbjct 122 VIGDVYGCGLDVPPYLVAP 140 >gi|254550072|ref|ZP_05140519.1| hypothetical protein Mtube_06379 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=70 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 69/70 (99%), Positives = 70/70 (100%), Gaps = 0/70 (0%) Query 75 VTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQPPVMADVYGCG 134 +TRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQPPVMADVYGCG Sbjct 1 MTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQPPVMADVYGCG 60 Query 135 TEVPSYLRLP 144 TEVPSYLRLP Sbjct 61 TEVPSYLRLP 70 >gi|169628295|ref|YP_001701944.1| hypothetical protein MAB_1202c [Mycobacterium abscessus ATCC 19977] gi|169240262|emb|CAM61290.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=139 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 74/135 (55%), Positives = 90/135 (67%), Gaps = 2/135 (1%) Query 8 RPDARYG-RPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVGYRLVDD 66 RP+ RYG +P R R +AIAL LV AG+ IA IGY R+ V G L Y+LVD Sbjct 3 RPEDRYGTKPATPGRGRW-IAIALTALVIVAGVAIAAIGYNRLGPGDVKGELSAYKLVDS 61 Query 67 ETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQPPV 126 T SVT SV R DPS+P CI+R R+ +GSETGRRE+LVPPS +V VT VK+++PPV Sbjct 62 STVSVTASVERKDPSKPAVCILRARSIDGSETGRREVLVPPSAERSVPVTALVKTTRPPV 121 Query 127 MADVYGCGTEVPSYL 141 DVYGC +PSYL Sbjct 122 TGDVYGCSLAIPSYL 136 >gi|343925084|ref|ZP_08764616.1| hypothetical protein GOALK_033_00750 [Gordonia alkanivorans NBRC 16433] gi|343765015|dbj|GAA11542.1| hypothetical protein GOALK_033_00750 [Gordonia alkanivorans NBRC 16433] Length=152 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 61/134 (46%), Positives = 87/134 (65%), Gaps = 0/134 (0%) Query 9 PDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVGYRLVDDET 68 P A Y S + RRR AL +LV AG+ +A IGY + T+ V+G GY ++DD T Sbjct 16 PRATYPEDSASAQTRRRWFRALSILVVVAGVTLAAIGYSKFGTADVSGEATGYEILDDNT 75 Query 69 ASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQPPVMA 128 +V +V RSDP +P AC+VR R+ +GSETGRRE+L+P + V T V +S+PPV+ Sbjct 76 VAVQFTVDRSDPGKPAACVVRGRSKDGSETGRREILIPAGSVERIGVRTEVTTSKPPVIG 135 Query 129 DVYGCGTEVPSYLR 142 +V+GC +VP+YL+ Sbjct 136 EVFGCTVDVPAYLQ 149 >gi|312138730|ref|YP_004006066.1| membrane protein [Rhodococcus equi 103S] gi|311888069|emb|CBH47381.1| putative membrane protein [Rhodococcus equi 103S] Length=142 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 64/142 (46%), Positives = 86/142 (61%), Gaps = 3/142 (2%) Query 1 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVG 60 M+ TP P RYG R + L LV AGI IA IGY + + V G + Sbjct 2 MSSTPSPD---RYGTARRRSGPLPWGKLLLTGLVVLAGIGIAYIGYTKFAVKDVEGKQIA 58 Query 61 YRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVK 120 + +VDD T ++ +VTR +PS P CI+R R+ +GSETGRRE+ V PS++ TV++T V Sbjct 59 FDIVDDRTMNIQFTVTRDNPSEPAVCIIRTRSKDGSETGRREVYVAPSDSDTVEITAPVY 118 Query 121 SSQPPVMADVYGCGTEVPSYLR 142 +S+PP M D+YGC T VP YLR Sbjct 119 ASKPPAMGDLYGCSTNVPDYLR 140 >gi|325676578|ref|ZP_08156256.1| hypothetical protein HMPREF0724_14039 [Rhodococcus equi ATCC 33707] gi|325552756|gb|EGD22440.1| hypothetical protein HMPREF0724_14039 [Rhodococcus equi ATCC 33707] Length=141 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 64/142 (46%), Positives = 86/142 (61%), Gaps = 3/142 (2%) Query 1 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVG 60 M+ TP P RYG R + L LV AGI IA IGY + + V G + Sbjct 1 MSSTPSPD---RYGTARRRSGPLPWGKLLLTGLVVLAGIGIAYIGYTKFAVKDVEGKQIA 57 Query 61 YRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVK 120 + +VDD T ++ +VTR +PS P CI+R R+ +GSETGRRE+ V PS++ TV++T V Sbjct 58 FDIVDDRTMNIQFTVTRDNPSEPAVCIIRTRSKDGSETGRREVYVAPSDSDTVEITAPVY 117 Query 121 SSQPPVMADVYGCGTEVPSYLR 142 +S+PP M D+YGC T VP YLR Sbjct 118 ASKPPAMGDLYGCSTNVPDYLR 139 >gi|254550073|ref|ZP_05140520.1| hypothetical protein Mtube_06384 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=74 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 59/59 (100%), Positives = 59/59 (100%), Gaps = 0/59 (0%) Query 1 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLV 59 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLV Sbjct 1 MTHTPIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLV 59 >gi|229491942|ref|ZP_04385762.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229321155|gb|EEN86956.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=142 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 57/135 (43%), Positives = 76/135 (57%), Gaps = 0/135 (0%) Query 7 PRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVGYRLVDD 66 P P RY + R+ + AL LV G IA Y + + + + + + +D Sbjct 5 PLPQDRYPSTTRTGSPRKWMVWALTALVIVVGGGIAYYAYGKFAVKEIETETISFDIAND 64 Query 67 ETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQPPV 126 T + +VTR D SR CIVR R+ +GSETGRRE+ VP SE T++ T VK+SQPP Sbjct 65 STVKIRFTVTRDDSSREAMCIVRARSKDGSETGRREVYVPSSEHQTLEFNTEVKTSQPPG 124 Query 127 MADVYGCGTEVPSYL 141 MADVYGC +VP YL Sbjct 125 MADVYGCSFDVPEYL 139 >gi|226307747|ref|YP_002767707.1| hypothetical protein RER_42600 [Rhodococcus erythropolis PR4] gi|226186864|dbj|BAH34968.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=142 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 57/135 (43%), Positives = 76/135 (57%), Gaps = 0/135 (0%) Query 7 PRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVGYRLVDD 66 P P RY + R+ + AL LV G IA Y + + + + + + +D Sbjct 5 PLPQDRYPSTTRTGSPRKWMVWALTALVIVVGGGIAYYAYGKFAVKEIETETISFDIAND 64 Query 67 ETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQPPV 126 T + +VTR D SR CIVR R+ +GSETGRRE+ VP SE T++ T VK+SQPP Sbjct 65 STVKIRFTVTRDDSSRDAMCIVRARSKDGSETGRREVYVPSSEHQTLEFNTEVKTSQPPG 124 Query 127 MADVYGCGTEVPSYL 141 MADVYGC +VP YL Sbjct 125 MADVYGCSFDVPEYL 139 >gi|326381822|ref|ZP_08203515.1| hypothetical protein SCNU_02712 [Gordonia neofelifaecis NRRL B-59395] gi|326199248|gb|EGD56429.1| hypothetical protein SCNU_02712 [Gordonia neofelifaecis NRRL B-59395] Length=152 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 55/123 (45%), Positives = 76/123 (62%), Gaps = 0/123 (0%) Query 19 SRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVGYRLVDDETASVTISVTRS 78 SR ++RR + L VLV AGI +A +G+++ V+G GY LV + +V +V R+ Sbjct 26 SRSSKRRWFLGLAVLVVVAGIGVAYLGFRQFGDPDVSGQATGYELVSSDRVAVQFTVNRN 85 Query 79 DPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQPPVMADVYGCGTEVP 138 DPS V CIVR RA +GSE GRRE+LVP V T V +S+PPV+ +V+GC +P Sbjct 86 DPSDAVVCIVRARAKDGSEVGRREVLVPSGSDVQVGARTEVATSKPPVIGEVFGCSLNIP 145 Query 139 SYL 141 YL Sbjct 146 PYL 148 >gi|54026799|ref|YP_121041.1| hypothetical protein nfa48250 [Nocardia farcinica IFM 10152] gi|54018307|dbj|BAD59677.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=146 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 60/137 (44%), Positives = 85/137 (63%), Gaps = 4/137 (2%) Query 8 RPDARYG-RPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVGYRLVDD 66 RP RYG RPR RR +A L +V AAG+V+A +G+Q+ + +GY +VDD Sbjct 12 RPADRYGTRPR---GPRRWLAPVLASVVLAAGLVVAYLGFQKYGPDEIQAEQLGYTVVDD 68 Query 67 ETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQPPV 126 T S+ +TR+ P RPV C VR + +E GRRE+LVP SE T+++TTT+++S Sbjct 69 STVSLRFKLTRAHPDRPVVCFVRAMNRDTAEVGRREVLVPGSEHGTLELTTTIRTSTRAA 128 Query 127 MADVYGCGTEVPSYLRL 143 VYGC +VP+YLR+ Sbjct 129 SGTVYGCSEDVPAYLRV 145 >gi|262201593|ref|YP_003272801.1| hypothetical protein Gbro_1638 [Gordonia bronchialis DSM 43247] gi|262084940|gb|ACY20908.1| hypothetical protein Gbro_1638 [Gordonia bronchialis DSM 43247] Length=153 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 65/140 (47%), Positives = 85/140 (61%), Gaps = 0/140 (0%) Query 5 PIPRPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVGYRLV 64 P P A Y R S R+RRR + L VLV AG+ IA +GY + V G GY L+ Sbjct 12 PQSGPRATYPEQRGSTRSRRRWFVGLSVLVVVAGVAIAALGYTKFGDEDVKGEGTGYELI 71 Query 65 DDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQP 124 D T +V ++TRSDPS+P C+VR R+ +GSETGRRE+L+ V VK+SQP Sbjct 72 DSSTVAVQFTLTRSDPSKPAVCVVRGRSKDGSETGRREVLIAAGPDRQQGVRALVKTSQP 131 Query 125 PVMADVYGCGTEVPSYLRLP 144 PV+ +V+GC VP+YLR P Sbjct 132 PVIGEVFGCTVTVPAYLREP 151 >gi|333921081|ref|YP_004494662.1| hypothetical protein AS9A_3421 [Amycolicicoccus subflavus DQS3-9A1] gi|333483302|gb|AEF41862.1| hypothetical protein AS9A_3421 [Amycolicicoccus subflavus DQS3-9A1] Length=122 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 49/118 (42%), Positives = 77/118 (66%), Gaps = 0/118 (0%) Query 24 RRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVGYRLVDDETASVTISVTRSDPSRP 83 R +AL + V+ +GY+ + ++ +T +G+ ++D+ T + VTR +P + Sbjct 3 RWAVVALATVFVTVLGVVVYLGYRPLVSTPITAERLGFEILDESTLKIRFKVTRDEPGQE 62 Query 84 VACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQPPVMADVYGCGTEVPSYL 141 V C+VR R+ +GSETGRRE+ VPPS++ V+VTT + +SQPP M DVYGC +VP+YL Sbjct 63 VVCVVRARSRDGSETGRREIYVPPSDSDAVEVTTHITTSQPPGMGDVYGCSADVPAYL 120 >gi|300789905|ref|YP_003770196.1| hypothetical protein AMED_8091 [Amycolatopsis mediterranei U32] gi|299799419|gb|ADJ49794.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340531576|gb|AEK46781.1| hypothetical protein RAM_41570 [Amycolatopsis mediterranei S699] Length=151 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 52/138 (38%), Positives = 83/138 (61%), Gaps = 6/138 (4%) Query 9 PDARYG--RPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVGYRLVDD 66 P+ RYG R + SRR RR + +A+ +LV+ +IA + Y + ++ + + + Sbjct 18 PEGRYGTGRAKTSRRWRRWLFLAIALLVSG---LIAWVAYVNLGSAPIDAERIAFSAKPG 74 Query 67 ETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQPPV 126 +T++VTR D SRP C+VR R G+E+GR+ELL+ P+ A +++TT+KS PV Sbjct 75 NAMEITLNVTRDDDSRPGVCVVRARDKTGAESGRKELLI-PAGAKHNRISTTIKSIGAPV 133 Query 127 MADVYGCGTEVPSYLRLP 144 ADV+GC ++P YL P Sbjct 134 TADVFGCSYDIPRYLSTP 151 >gi|256374857|ref|YP_003098517.1| hypothetical protein Amir_0708 [Actinosynnema mirum DSM 43827] gi|255919160|gb|ACU34671.1| hypothetical protein Amir_0708 [Actinosynnema mirum DSM 43827] Length=139 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 54/135 (40%), Positives = 78/135 (58%), Gaps = 7/135 (5%) Query 9 PDARYGRPR--LSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVGYRLVDD 66 P+ RYG R L R AR + +A G+L AG + GY +S + + Y + D Sbjct 7 PEGRYGTARKPLPRWARWSLLVA-GIL---AGAAVGWAGYANFGSSPIASDKLRYNALGD 62 Query 67 ETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQPPV 126 + V +V R P RPV C++R + +G E GRRE+LVP S+ TV+ T V++S+PPV Sbjct 63 DRMEVVFTVDRDQPERPVVCVLRALSLDGEEAGRREVLVPASDGGTVE-TGVVRTSKPPV 121 Query 127 MADVYGCGTEVPSYL 141 +V+GC EVP+YL Sbjct 122 TGEVFGCSYEVPAYL 136 >gi|226365322|ref|YP_002783105.1| hypothetical protein ROP_59130 [Rhodococcus opacus B4] gi|226243812|dbj|BAH54160.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=141 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 43/96 (45%), Positives = 61/96 (64%), Gaps = 0/96 (0%) Query 46 YQRISTSAVTGSLVGYRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLV 105 Y + + S + + LV D +T +VTR DPSR CIVR R+ +GSETGRRE+ + Sbjct 43 YDKFAVSEIDSEATSFDLVSDSQLDITFTVTREDPSRAAVCIVRSRSKDGSETGRREVYI 102 Query 106 PPSEATTVQVTTTVKSSQPPVMADVYGCGTEVPSYL 141 ++ TV+VT V +S+PP M D+YGC +VP+YL Sbjct 103 AGGDSQTVKVTAPVYTSRPPAMGDIYGCSLDVPAYL 138 >gi|111022814|ref|YP_705786.1| hypothetical protein RHA1_ro05851 [Rhodococcus jostii RHA1] gi|110822344|gb|ABG97628.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=141 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 43/96 (45%), Positives = 60/96 (63%), Gaps = 0/96 (0%) Query 46 YQRISTSAVTGSLVGYRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLV 105 Y + + S + + LV D +T +VTR DPS+ CIVR R+ +GSETGRRE+ + Sbjct 43 YDKFAVSEIDSEATSFDLVSDSQLDITFTVTREDPSQAAVCIVRSRSKDGSETGRREVYI 102 Query 106 PPSEATTVQVTTTVKSSQPPVMADVYGCGTEVPSYL 141 E TV+VT V +S+PP M D+YGC +VP+YL Sbjct 103 AGGEDQTVKVTAPVYTSRPPAMGDIYGCSLDVPAYL 138 >gi|302530116|ref|ZP_07282458.1| predicted protein [Streptomyces sp. AA4] gi|302439011|gb|EFL10827.1| predicted protein [Streptomyces sp. AA4] Length=146 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 55/140 (40%), Positives = 83/140 (60%), Gaps = 7/140 (5%) Query 8 RPDARYG---RPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVGYRLV 64 RP RYG + + S+R RR + +A+ ++V+ A I + Y + + + VG+ Sbjct 11 RPADRYGAAGKGKPSKRWRRWLFVAVALVVSGA---IGFVYYLNLGKTPIEAERVGFEER 67 Query 65 DDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQP 124 + VT++VTR D S+P C+VRVR +G+E+GRRE+LV P+ A+ +V T VKS Sbjct 68 PGDAMQVTLNVTRDDDSKPGVCVVRVRDKSGAESGRREVLV-PAGASHSRVNTVVKSIGT 126 Query 125 PVMADVYGCGTEVPSYLRLP 144 PV ADV+GC +P YL P Sbjct 127 PVTADVFGCSYSIPRYLSTP 146 >gi|19552212|ref|NP_600214.1| hypothetical protein NCgl0947 [Corynebacterium glutamicum ATCC 13032] gi|145295137|ref|YP_001137958.1| hypothetical protein cgR_1080 [Corynebacterium glutamicum R] gi|21323754|dbj|BAB98380.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032] gi|140845057|dbj|BAF54056.1| hypothetical protein [Corynebacterium glutamicum R] gi|344044408|gb|EGV40085.1| hypothetical protein CgS9114_09728 [Corynebacterium glutamicum S9114] Length=161 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 48/140 (35%), Positives = 79/140 (57%), Gaps = 4/140 (2%) Query 8 RPDARYGRPRLSRRARRRVA----IALGVLVAAAGIVIAVIGYQRISTSAVTGSLVGYRL 63 RP +RY PR A R ++ +GVL+ A +++ + V+G + + Sbjct 22 RPASRYNSPRPEAAAGRNISGKIIAVIGVLLVIAIVIVGANFLKNRDAQTVSGQMGSFER 81 Query 64 VDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQ 123 +DD+T + VTR DPS+ CIV + + +E GRRE+LV PS+ +TV+++T + + + Sbjct 82 IDDDTFRFEVDVTRDDPSQVAYCIVTAKDYSHAEVGRREVLVEPSDHSTVRISTLIPTRE 141 Query 124 PPVMADVYGCGTEVPSYLRL 143 P V VYGC T +PS++ L Sbjct 142 PAVSGGVYGCSTVIPSHMNL 161 >gi|296140829|ref|YP_003648072.1| hypothetical protein Tpau_3146 [Tsukamurella paurometabola DSM 20162] gi|296028963|gb|ADG79733.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=145 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 58/134 (44%), Positives = 81/134 (61%), Gaps = 1/134 (0%) Query 8 RPDARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVGYRLVDDE 67 RP RY + R RR + I L V+V + +A +GY + + VTG GY +V D Sbjct 10 RPSDRYPDEQDPHRTRRLLVIGLVVVVVLG-VGLAYLGYSKFAGKPVTGETAGYSVVSDS 68 Query 68 TASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQPPVM 127 T V ++VTR D S+PV+CIVR + G E GRRE VPPS V V++ V+++ P + Sbjct 69 TVEVQVTVTRKDASQPVSCIVRAKNKAGDELGRREFYVPPSSDPVVVVSSEVRTTAPAAV 128 Query 128 ADVYGCGTEVPSYL 141 DV+GCGT+VP+YL Sbjct 129 GDVFGCGTDVPAYL 142 >gi|319949699|ref|ZP_08023730.1| hypothetical protein ES5_09525 [Dietzia cinnamea P4] gi|319436629|gb|EFV91718.1| hypothetical protein ES5_09525 [Dietzia cinnamea P4] Length=152 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 41/97 (43%), Positives = 59/97 (61%), Gaps = 0/97 (0%) Query 46 YQRISTSAVTGSLVGYRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLV 105 Y+ T ++G G +VD +T +VTR +P P CI+R + + E GRRE+ V Sbjct 55 YRLNQTPDISGEATGVEVVDSGRVDLTFTVTREEPGTPAYCIIRAQEESKGELGRREVYV 114 Query 106 PPSEATTVQVTTTVKSSQPPVMADVYGCGTEVPSYLR 142 PPSE TV++T +V ++ +ADVYGCG +VP YLR Sbjct 115 PPSENGTVEITASVFTTDRAFIADVYGCGEDVPDYLR 151 >gi|257057148|ref|YP_003134980.1| hypothetical protein Svir_31800 [Saccharomonospora viridis DSM 43017] gi|256587020|gb|ACU98153.1| hypothetical protein Svir_31800 [Saccharomonospora viridis DSM 43017] Length=156 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 51/142 (36%), Positives = 72/142 (51%), Gaps = 12/142 (8%) Query 10 DARYGR-------PRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVGYR 62 + RYG PRL R R A +G++ + + Y + + + G V Y Sbjct 15 EERYGSAWKRSAGPRLRLRGFR--AWLVGIVAVVTLTLGGYLVYAQFFATPIEGQRVAYT 72 Query 63 LVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSS 122 + VT+ V R DP+RP C+VRVR G+E GR+E+ VPP ++ T V+S Sbjct 73 ELPGNAMEVTVDVIRDDPARPAVCVVRVRDITGAEGGRKEIYVPPGVG---RLNTVVQSI 129 Query 123 QPPVMADVYGCGTEVPSYLRLP 144 + PV ADVYGC +VP YL P Sbjct 130 EQPVGADVYGCSYDVPEYLSTP 151 >gi|62389877|ref|YP_225279.1| hypothetical protein cg1125 [Corynebacterium glutamicum ATCC 13032] gi|41325212|emb|CAF19693.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC 13032] Length=112 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 39/108 (37%), Positives = 64/108 (60%), Gaps = 3/108 (2%) Query 39 IVIAVIGYQRIST---SAVTGSLVGYRLVDDETASVTISVTRSDPSRPVACIVRVRATNG 95 I I ++G + V+G + + +DD+T + VTR DPS+ CIV + + Sbjct 5 IAIVIVGANFLKNRDAQTVSGQMGSFERIDDDTFRFEVDVTRDDPSQVAYCIVTAKDYSH 64 Query 96 SETGRRELLVPPSEATTVQVTTTVKSSQPPVMADVYGCGTEVPSYLRL 143 +E GRRE+LV PS+ +TV+++T + + +P V VYGC T +PS++ L Sbjct 65 AEVGRREVLVEPSDHSTVRISTLIPTREPAVSGGVYGCSTVIPSHMNL 112 >gi|25027607|ref|NP_737661.1| hypothetical protein CE1051 [Corynebacterium efficiens YS-314] gi|259506991|ref|ZP_05749891.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|23492889|dbj|BAC17861.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259165443|gb|EEW49997.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length=175 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/97 (40%), Positives = 57/97 (59%), Gaps = 0/97 (0%) Query 47 QRISTSAVTGSLVGYRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVP 106 QR VTG++ + +DD T + + VTR +P P CIV + +E GRRE+LV Sbjct 79 QRREAETVTGTMGAFERIDDSTFQMNVDVTRDNPELPTYCIVTALDYSRAEVGRREILVE 138 Query 107 PSEATTVQVTTTVKSSQPPVMADVYGCGTEVPSYLRL 143 PS + V++TT + + +P V VYGC T +PS++ L Sbjct 139 PSTESVVRITTQIPTREPAVSGGVYGCSTTIPSHMNL 175 >gi|134097506|ref|YP_001103167.1| hypothetical protein SACE_0908 [Saccharopolyspora erythraea NRRL 2338] gi|291009353|ref|ZP_06567326.1| hypothetical protein SeryN2_32940 [Saccharopolyspora erythraea NRRL 2338] gi|133910129|emb|CAM00242.1| putative conserved membrane protein [Saccharopolyspora erythraea NRRL 2338] Length=123 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 58/96 (61%), Gaps = 1/96 (1%) Query 46 YQRISTSAVTGSLVGYRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLV 105 Y + ++ + G + + DD + +T+ V R DP RP AC+VR RA +G E GR+E+L+ Sbjct 21 YANLGSAPIEGKQTAFTIDDDSSVRITLEVRRDDPRRPAACVVRARAESGDEVGRKEVLI 80 Query 106 PPSEATTVQVTTTVKSSQPPVMADVYGCGTEVPSYL 141 P++ T++ T +++S + +VYGC VP YL Sbjct 81 QPAD-DTIRQETVLRTSARATIGEVYGCTYNVPEYL 115 >gi|336326158|ref|YP_004606124.1| hypothetical protein CRES_1607 [Corynebacterium resistens DSM 45100] gi|336102140|gb|AEI09960.1| putative secreted protein [Corynebacterium resistens DSM 45100] Length=134 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 46/135 (35%), Positives = 75/135 (56%), Gaps = 5/135 (3%) Query 10 DARYGRPRLSRRA-RRRVAIALGVLVAAAGIVIAVIGYQRISTSA-VTGSLVGYRLVDDE 67 D RYG R ++ A R V + L +L+AAA + ++ R STSA VT G ++V + Sbjct 2 DERYGNERSNKFAGRLMVLVLLAILIAAA---VYIVSQFRHSTSADVTAVESGGKVVSAD 58 Query 68 TASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQPPVM 127 ++++ VTR+D S+P CIV + +E GRRE +VP A + + + + Sbjct 59 RLNMSVDVTRTDASKPAYCIVTALDYDKNEVGRREFVVPAGGAEVTRWHVDINTRKEAYA 118 Query 128 ADVYGCGTEVPSYLR 142 A VYGC + +P++L+ Sbjct 119 ATVYGCSSTIPAHLK 133 >gi|227487835|ref|ZP_03918151.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227092162|gb|EEI27474.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] Length=158 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 45/136 (34%), Positives = 63/136 (47%), Gaps = 4/136 (2%) Query 8 RPDARYGRPRLSRRARRRVAI--ALGVLVAAAGIVIAVIGYQRISTSAVTGSLVGYRLVD 65 R D+RY R R ++ + A+ L+A A +V YQ V V Y + Sbjct 6 RLDSRYNRQRADNNLAGKIIVIGAILFLIAGAYVVWQYSQYQ--ERDKVNAEKVEYTRLQ 63 Query 66 DETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQPP 125 D T +T R +P CIV N +E GRRE+L+P + T + S P Sbjct 64 DNTLRLTFDTIRDNPDLDSYCIVLSWDYNHAELGRREVLIPAGGDKKTRHTVDIPSRGVP 123 Query 126 VMADVYGCGTEVPSYL 141 VM ++YGC T +PSYL Sbjct 124 VMGEIYGCSTTLPSYL 139 >gi|38233522|ref|NP_939289.1| hypothetical protein DIP0926 [Corynebacterium diphtheriae NCTC 13129] gi|38199782|emb|CAE49445.1| Putative membrane protein [Corynebacterium diphtheriae] Length=155 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/95 (35%), Positives = 55/95 (58%), Gaps = 0/95 (0%) Query 47 QRISTSAVTGSLVGYRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVP 106 Q + ++G ++DD T +T+ +TRSD S P CIV + +E GRRE+ +P Sbjct 58 QHSQMTKISGQTANVHVIDDHTFKLTVDITRSDVSVPSYCIVTALNYDIAEVGRREIFLP 117 Query 107 PSEATTVQVTTTVKSSQPPVMADVYGCGTEVPSYL 141 +T ++ +++++P V DVYGC T++P YL Sbjct 118 AGGDSTRRIDVELQTTEPAVSGDVYGCATDIPFYL 152 >gi|227542475|ref|ZP_03972524.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227181673|gb|EEI62645.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] Length=158 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/136 (34%), Positives = 62/136 (46%), Gaps = 4/136 (2%) Query 8 RPDARYGRPRLSRRARRRVAI--ALGVLVAAAGIVIAVIGYQRISTSAVTGSLVGYRLVD 65 R D+RY R R ++ + A+ L+A A +V YQ V V Y + Sbjct 6 RLDSRYNRQRTDNNLAGKIIVIGAILFLIAGAYVVWQYSQYQ--ERDKVNAEKVEYTRLQ 63 Query 66 DETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQPP 125 D T +T R +P CIV N +E GRRE+L+P + T + S P Sbjct 64 DNTLRLTFDTIRDNPDLDSYCIVLSSDYNHAELGRREVLIPAGGDKKTRHTVDIPSRGVP 123 Query 126 VMADVYGCGTEVPSYL 141 VM +YGC T +PSYL Sbjct 124 VMGGIYGCSTTLPSYL 139 >gi|172040279|ref|YP_001799993.1| putative secreted protein [Corynebacterium urealyticum DSM 7109] gi|171851583|emb|CAQ04559.1| putative secreted protein [Corynebacterium urealyticum DSM 7109] Length=140 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 43/132 (33%), Positives = 68/132 (52%), Gaps = 1/132 (0%) Query 11 ARYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGYQRISTSAVTGSLVGYRLVDDETAS 70 ARYG R A + + IAL VL+A A + AV + S++ VT G +V D + Sbjct 9 ARYGAERNRPFAGKVLVIALVVLIAGA-MAYAVNQFMNASSADVTAVESGGSVVSDNRLN 67 Query 71 VTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQPPVMADV 130 + + VTR DPS+P C+V + +E GRRE +P T + + + + + Sbjct 68 MRVDVTREDPSKPAYCVVTAMDYDKNEVGRREFYIPAGGPVTSRHSVDINTRVQGYAGKI 127 Query 131 YGCGTEVPSYLR 142 YGC + +PS+L+ Sbjct 128 YGCSSIIPSHLK 139 >gi|300858140|ref|YP_003783123.1| hypothetical protein cpfrc_00722 [Corynebacterium pseudotuberculosis FRC41] gi|300685594|gb|ADK28516.1| hypothetical protein cpfrc_00722 [Corynebacterium pseudotuberculosis FRC41] gi|302205861|gb|ADL10203.1| Hypothetical protein CpC231_0721 [Corynebacterium pseudotuberculosis C231] gi|302330419|gb|ADL20613.1| Hypothetical protein Cp1002_0722 [Corynebacterium pseudotuberculosis 1002] gi|308276096|gb|ADO25995.1| putative secreted protein [Corynebacterium pseudotuberculosis I19] gi|341824533|gb|AEK92054.1| Hypothetical protein CpPAT10_0720 [Corynebacterium pseudotuberculosis PAT10] Length=150 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/132 (30%), Positives = 67/132 (51%), Gaps = 2/132 (1%) Query 12 RYGRPRLSRRARRRVAIALGVLVAAAGIVIAVIGY-QRISTSAVTGSLVGYRLVDDETAS 70 RY P+ + ++ +A+ +LV A I +A+I + Q+ + ++G + VDD Sbjct 18 RYSAPQKTSNLSGKL-LAVLILVIVAAIAVALIKFVQKDRQTKISGQIANVMQVDDNNFK 76 Query 71 VTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQPPVMADV 130 +T+ VTR + S CIV +E GRRE +P T ++ +K+S+ V ++ Sbjct 77 LTVDVTRDNTSVDHYCIVTALDYEMAEVGRREFFLPSGGDKTQRIEVPIKTSKGAVSGNL 136 Query 131 YGCGTEVPSYLR 142 YGC +P YL Sbjct 137 YGCSGSIPFYLH 148 >gi|340794905|ref|YP_004760368.1| hypothetical protein CVAR_1942 [Corynebacterium variabile DSM 44702] gi|340534815|gb|AEK37295.1| hypothetical protein CVAR_1942 [Corynebacterium variabile DSM 44702] Length=192 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/137 (30%), Positives = 68/137 (50%), Gaps = 3/137 (2%) Query 7 PRPDARYGRPRLSRRARRRVAIALGVL--VAAAGIVIAVIGYQRISTSAVTGSLVGYRLV 64 P+ A YG + R + +G++ + AG+ I ++ S + VT S+ G+ Sbjct 49 PQNKASYGASDQNTRGVSGKFLVIGIVGVLIVAGVFIWS-QWRNSSDADVTASVAGFSDN 107 Query 65 DDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTTVKSSQP 124 +D++ + + VTR D S+P CIV + +E GRRE +V ++ V + + Sbjct 108 EDDSIMMNLDVTRDDTSKPAYCIVTAMNFDKAEVGRREAVVAAGGNENTRLQIKVPTREQ 167 Query 125 PVMADVYGCGTEVPSYL 141 V D+YGC + PSYL Sbjct 168 AVATDLYGCSSVFPSYL 184 >gi|227832752|ref|YP_002834459.1| hypothetical protein cauri_0924 [Corynebacterium aurimucosum ATCC 700975] gi|262182758|ref|ZP_06042179.1| hypothetical protein CaurA7_02089 [Corynebacterium aurimucosum ATCC 700975] gi|227453768|gb|ACP32521.1| putative membrane protein [Corynebacterium aurimucosum ATCC 700975] Length=163 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/143 (32%), Positives = 69/143 (49%), Gaps = 14/143 (9%) Query 8 RPDARYGRPRLS------RRARRRVAIALGVLVAAAGIVIAVI---GYQRISTSAVTGSL 58 R +RYG S R V + LG+LVAA IV V G Q+++ S Sbjct 12 RSQSRYGSTNSSPLTGGSWTNRALVLVFLGMLVAA--IVFGVQYFRGQQKVNADI---SY 66 Query 59 VGYRLVDDETASVTISVTRSDPSRPVACIVRVRATNGSETGRRELLVPPSEATTVQVTTT 118 V + ++ D++ + + +TR+ P CIV+ +E GRRE+ VP + +V Sbjct 67 VTHEILSDDSMRIWVDITRNRVEEPAYCIVQAFDYAKAEVGRREIAVPAGGESAQRVAVD 126 Query 119 VKSSQPPVMADVYGCGTEVPSYL 141 + ++ P V VYGC +PSYL Sbjct 127 IPTNHPAVAGGVYGCSGNIPSYL 149 Lambda K H 0.319 0.132 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 128702269584 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40