BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1085c
Length=242
Score E
Sequences producing significant alignments: (Bits) Value
gi|308379964|ref|ZP_07488235.2| hemolysin [Mycobacterium tubercu... 480 9e-134
gi|15608225|ref|NP_215601.1| hemolysin-like protein [Mycobacteri... 479 2e-133
gi|289569073|ref|ZP_06449300.1| LOW QUALITY PROTEIN: hemolysin [... 439 1e-121
gi|289753148|ref|ZP_06512526.1| LOW QUALITY PROTEIN: membrane pr... 434 4e-120
gi|183984352|ref|YP_001852643.1| hemolysin-like protein [Mycobac... 426 2e-117
gi|118616084|ref|YP_904416.1| hemolysin-like protein [Mycobacter... 425 4e-117
gi|240170281|ref|ZP_04748940.1| hemolysin-like protein [Mycobact... 409 1e-112
gi|289555132|ref|ZP_06444342.1| LOW QUALITY PROTEIN: hemolysin [... 388 3e-106
gi|315443106|ref|YP_004075985.1| channel protein, hemolysin III ... 335 5e-90
gi|145222642|ref|YP_001133320.1| hemolysin III family channel pr... 334 5e-90
gi|118464088|ref|YP_880456.1| channel protein, hemolysin III fam... 333 1e-89
gi|336458705|gb|EGO37665.1| channel protein, hemolysin III famil... 333 2e-89
gi|41408802|ref|NP_961638.1| hypothetical protein MAP2704 [Mycob... 331 6e-89
gi|120405615|ref|YP_955444.1| hemolysin III family channel prote... 330 9e-89
gi|296169954|ref|ZP_06851561.1| hly-III family protein [Mycobact... 327 1e-87
gi|108801102|ref|YP_641299.1| hemolysin III family channel prote... 325 3e-87
gi|118472546|ref|YP_889503.1| channel protein, hemolysin III fam... 323 1e-86
gi|342861677|ref|ZP_08718323.1| channel protein, hemolysin III f... 323 1e-86
gi|254819723|ref|ZP_05224724.1| channel protein, hemolysin III f... 316 1e-84
gi|169628301|ref|YP_001701950.1| hypothetical protein MAB_1208c ... 298 5e-79
gi|289761223|ref|ZP_06520601.1| LOW QUALITY PROTEIN: hypothetica... 290 1e-76
gi|167966577|ref|ZP_02548854.1| hypothetical hemolysin-like prot... 283 1e-74
gi|333989672|ref|YP_004522286.1| hemolysin-like protein [Mycobac... 283 2e-74
gi|229493942|ref|ZP_04387714.1| channel protein, hemolysin III f... 271 5e-71
gi|226307743|ref|YP_002767703.1| hypothetical protein RER_42560 ... 271 8e-71
gi|111022818|ref|YP_705790.1| hemolytic factor [Rhodococcus jost... 267 1e-69
gi|312138737|ref|YP_004006073.1| hemolysin-iii like protein [Rho... 259 2e-67
gi|226365326|ref|YP_002783109.1| hemolysin III family protein [R... 253 1e-65
gi|333921071|ref|YP_004494652.1| putative hemolytic factor [Amyc... 252 3e-65
gi|296394379|ref|YP_003659263.1| channel protein, hemolysin III ... 234 1e-59
gi|302530105|ref|ZP_07282447.1| hemolysin III family channel pro... 230 1e-58
gi|284989527|ref|YP_003408081.1| hemolysin III family channel pr... 229 2e-58
gi|134097518|ref|YP_001103179.1| hemolysin III family channel pr... 228 8e-58
gi|317508391|ref|ZP_07966063.1| hemolysin III family channel pro... 226 3e-57
gi|296139251|ref|YP_003646494.1| hemolysin III family channel pr... 225 4e-57
gi|343925094|ref|ZP_08764626.1| hypothetical protein GOALK_033_0... 225 4e-57
gi|256374862|ref|YP_003098522.1| channel protein, hemolysin III ... 224 7e-57
gi|108801621|ref|YP_641818.1| hemolysin III family channel prote... 224 1e-56
gi|126437605|ref|YP_001073296.1| hemolysin III family channel pr... 222 4e-56
gi|145592662|ref|YP_001156959.1| hemolysin III family channel pr... 222 4e-56
gi|159035766|ref|YP_001535019.1| hemolysin III family channel pr... 220 1e-55
gi|238062009|ref|ZP_04606718.1| hemolysin III family channel pro... 219 2e-55
gi|302864648|ref|YP_003833285.1| channel protein, hemolysin III ... 219 3e-55
gi|158312688|ref|YP_001505196.1| hemolysin III family channel pr... 219 3e-55
gi|300789890|ref|YP_003770181.1| hemolysin III-related protein [... 216 2e-54
gi|257057127|ref|YP_003134959.1| channel protein, hemolysin III ... 215 4e-54
gi|145222115|ref|YP_001132793.1| hemolysin III family channel pr... 215 5e-54
gi|326381833|ref|ZP_08203526.1| channel protein, hemolysin III f... 214 8e-54
gi|331694814|ref|YP_004331053.1| channel protein, hemolysin III ... 214 1e-53
gi|86742577|ref|YP_482977.1| hemolysin III family channel protei... 213 2e-53
>gi|308379964|ref|ZP_07488235.2| hemolysin [Mycobacterium tuberculosis SUMu011]
gi|308363044|gb|EFP51895.1| hemolysin [Mycobacterium tuberculosis SUMu011]
gi|339294081|gb|AEJ46192.1| hemolysin [Mycobacterium tuberculosis CCDC5079]
gi|339297721|gb|AEJ49831.1| hemolysin [Mycobacterium tuberculosis CCDC5180]
Length=258
Score = 480 bits (1235), Expect = 9e-134, Method: Compositional matrix adjust.
Identities = 242/242 (100%), Positives = 242/242 (100%), Gaps = 0/242 (0%)
Query 1 MSGQADTATTAEARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSW 60
MSGQADTATTAEARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSW
Sbjct 17 MSGQADTATTAEARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSW 76
Query 61 AVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTP 120
AVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTP
Sbjct 77 AVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTP 136
Query 121 FALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILH 180
FALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILH
Sbjct 137 FALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILH 196
Query 181 NAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFV 240
NAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFV
Sbjct 197 NAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFV 256
Query 241 VF 242
VF
Sbjct 257 VF 258
>gi|15608225|ref|NP_215601.1| hemolysin-like protein [Mycobacterium tuberculosis H37Rv]
gi|15840522|ref|NP_335559.1| Hly-III family protein [Mycobacterium tuberculosis CDC1551]
gi|31792276|ref|NP_854769.1| hemolysin-like protein [Mycobacterium bovis AF2122/97]
58 more sequence titles
Length=242
Score = 479 bits (1233), Expect = 2e-133, Method: Compositional matrix adjust.
Identities = 242/242 (100%), Positives = 242/242 (100%), Gaps = 0/242 (0%)
Query 1 MSGQADTATTAEARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSW 60
MSGQADTATTAEARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSW
Sbjct 1 MSGQADTATTAEARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSW 60
Query 61 AVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTP 120
AVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTP
Sbjct 61 AVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTP 120
Query 121 FALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILH 180
FALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILH
Sbjct 121 FALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILH 180
Query 181 NAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFV 240
NAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFV
Sbjct 181 NAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFV 240
Query 241 VF 242
VF
Sbjct 241 VF 242
>gi|289569073|ref|ZP_06449300.1| LOW QUALITY PROTEIN: hemolysin [Mycobacterium tuberculosis T17]
gi|289542827|gb|EFD46475.1| LOW QUALITY PROTEIN: hemolysin [Mycobacterium tuberculosis T17]
Length=222
Score = 439 bits (1130), Expect = 1e-121, Method: Compositional matrix adjust.
Identities = 222/222 (100%), Positives = 222/222 (100%), Gaps = 0/222 (0%)
Query 21 HHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATIT 80
HHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATIT
Sbjct 1 HHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATIT 60
Query 81 MFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWG 140
MFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWG
Sbjct 61 MFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWG 120
Query 141 GAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIG 200
GAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIG
Sbjct 121 GAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIG 180
Query 201 GILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
GILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFVVF
Sbjct 181 GILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFVVF 222
>gi|289753148|ref|ZP_06512526.1| LOW QUALITY PROTEIN: membrane protein [Mycobacterium tuberculosis
EAS054]
gi|289693735|gb|EFD61164.1| LOW QUALITY PROTEIN: membrane protein [Mycobacterium tuberculosis
EAS054]
Length=243
Score = 434 bits (1117), Expect = 4e-120, Method: Compositional matrix adjust.
Identities = 221/222 (99%), Positives = 221/222 (99%), Gaps = 0/222 (0%)
Query 1 MSGQADTATTAEARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSW 60
MSGQADTATTAEARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSW
Sbjct 1 MSGQADTATTAEARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSW 60
Query 61 AVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTP 120
AVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTP
Sbjct 61 AVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTP 120
Query 121 FALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILH 180
FALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILH
Sbjct 121 FALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILH 180
Query 181 NAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFF 222
NAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEF
Sbjct 181 NAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFL 222
>gi|183984352|ref|YP_001852643.1| hemolysin-like protein [Mycobacterium marinum M]
gi|183177678|gb|ACC42788.1| hemolysin-like protein [Mycobacterium marinum M]
Length=246
Score = 426 bits (1094), Expect = 2e-117, Method: Compositional matrix adjust.
Identities = 217/246 (89%), Positives = 222/246 (91%), Gaps = 4/246 (1%)
Query 1 MSGQADTATTAEARTPA----HAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLV 56
MS QA A+TAE +AAHHLVEGVAR LTKPRFRGWIHVYSAGTAVLAGASLV
Sbjct 1 MSSQASMASTAEPEPQGLAVPNAAHHLVEGVARALTKPRFRGWIHVYSAGTAVLAGASLV 60
Query 57 AVSWAVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAG 116
AVSWAVGS +AGL TLAY AAT+ MFTVSATYHRVNW SAT WMKRADHSMIFVFIAG
Sbjct 61 AVSWAVGSTEAGLATLAYIAATVVMFTVSATYHRVNWASATTHKWMKRADHSMIFVFIAG 120
Query 117 SYTPFALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTA 176
SYTPFALLALP HDGRVVLSIVWGGAIAGILLKMCWP APR VGVPLYLLLGWVAVWYTA
Sbjct 121 SYTPFALLALPGHDGRVVLSIVWGGAIAGILLKMCWPTAPRWVGVPLYLLLGWVAVWYTA 180
Query 177 TILHNAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIA 236
TILHNAGVTALVLLFVGGALYSIGGILYAVRWPDPWP+TFGYHEFFHACTAVAAICHYIA
Sbjct 181 TILHNAGVTALVLLFVGGALYSIGGILYAVRWPDPWPSTFGYHEFFHACTAVAAICHYIA 240
Query 237 MWFVVF 242
MWFVVF
Sbjct 241 MWFVVF 246
>gi|118616084|ref|YP_904416.1| hemolysin-like protein [Mycobacterium ulcerans Agy99]
gi|118568194|gb|ABL02945.1| hemolysin-like protein [Mycobacterium ulcerans Agy99]
Length=246
Score = 425 bits (1092), Expect = 4e-117, Method: Compositional matrix adjust.
Identities = 216/246 (88%), Positives = 222/246 (91%), Gaps = 4/246 (1%)
Query 1 MSGQADTATTAEARTPA----HAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLV 56
MS QA A+TAE +AAHHLVEGVAR LTKPRFRGWIHVYSAGTAVLAGASLV
Sbjct 1 MSSQASMASTAEPEPQGLAVPNAAHHLVEGVARALTKPRFRGWIHVYSAGTAVLAGASLV 60
Query 57 AVSWAVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAG 116
AVSWAVGS +AGL TLAY AAT+ MFTVSATYHRVNW SAT WMKRADHSMIFVFIAG
Sbjct 61 AVSWAVGSTEAGLATLAYVAATVVMFTVSATYHRVNWASATTHKWMKRADHSMIFVFIAG 120
Query 117 SYTPFALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTA 176
SYTPFALLALP HDGRVV+SIVWGGAIAGILLKMCWP APR VGVPLYLLLGWVAVWYTA
Sbjct 121 SYTPFALLALPGHDGRVVVSIVWGGAIAGILLKMCWPTAPRWVGVPLYLLLGWVAVWYTA 180
Query 177 TILHNAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIA 236
TILHNAGVTALVLLFVGGALYSIGGILYAVRWPDPWP+TFGYHEFFHACTAVAAICHYIA
Sbjct 181 TILHNAGVTALVLLFVGGALYSIGGILYAVRWPDPWPSTFGYHEFFHACTAVAAICHYIA 240
Query 237 MWFVVF 242
MWFVVF
Sbjct 241 MWFVVF 246
>gi|240170281|ref|ZP_04748940.1| hemolysin-like protein [Mycobacterium kansasii ATCC 12478]
Length=246
Score = 409 bits (1052), Expect = 1e-112, Method: Compositional matrix adjust.
Identities = 204/228 (90%), Positives = 213/228 (94%), Gaps = 0/228 (0%)
Query 15 TPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAY 74
TP++AAHH+VEGV R LTKPRFRGWIHVYSAGTAV AGASLVAVSWAV S +AGL TLAY
Sbjct 19 TPSNAAHHIVEGVTRALTKPRFRGWIHVYSAGTAVFAGASLVAVSWAVSSTEAGLATLAY 78
Query 75 TAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVV 134
AT+ MFTVSATYHRVNW+S +AR WMKRADHSMIFVFIAGSYTPFALLALP H GRVV
Sbjct 79 IMATVVMFTVSATYHRVNWESPSARAWMKRADHSMIFVFIAGSYTPFALLALPGHAGRVV 138
Query 135 LSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGG 194
LSIVWGGAIAG+LLKMCWP APR VGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGG
Sbjct 139 LSIVWGGAIAGVLLKMCWPTAPRWVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGG 198
Query 195 ALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
ALYSIGGILYAVRWPDPWP+TFGYHEFFHACTAVAAICHYIAMWFVVF
Sbjct 199 ALYSIGGILYAVRWPDPWPSTFGYHEFFHACTAVAAICHYIAMWFVVF 246
>gi|289555132|ref|ZP_06444342.1| LOW QUALITY PROTEIN: hemolysin [Mycobacterium tuberculosis KZN
605]
gi|289439764|gb|EFD22257.1| LOW QUALITY PROTEIN: hemolysin [Mycobacterium tuberculosis KZN
605]
Length=211
Score = 388 bits (997), Expect = 3e-106, Method: Compositional matrix adjust.
Identities = 197/197 (100%), Positives = 197/197 (100%), Gaps = 0/197 (0%)
Query 46 GTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRA 105
GTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRA
Sbjct 15 GTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRA 74
Query 106 DHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYL 165
DHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYL
Sbjct 75 DHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYL 134
Query 166 LLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHAC 225
LLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHAC
Sbjct 135 LLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHAC 194
Query 226 TAVAAICHYIAMWFVVF 242
TAVAAICHYIAMWFVVF
Sbjct 195 TAVAAICHYIAMWFVVF 211
>gi|315443106|ref|YP_004075985.1| channel protein, hemolysin III family [Mycobacterium sp. Spyr1]
gi|315261409|gb|ADT98150.1| channel protein, hemolysin III family [Mycobacterium sp. Spyr1]
Length=243
Score = 335 bits (858), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 160/231 (70%), Positives = 189/231 (82%), Gaps = 0/231 (0%)
Query 12 EARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTT 71
++ P + EGVA+ KPR RGWIHVYSA AV+ G++LVAVSW+ S ++G+ T
Sbjct 13 RSQGPEDLPEAVAEGVAQFFGKPRLRGWIHVYSAVIAVICGSALVAVSWSAQSTRSGIAT 72
Query 72 LAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDG 131
L YT + MF VS TYHRVNW SATAR WMKRADHSMIF+FIAGSYTPFALLALP +DG
Sbjct 73 LIYTLTIVAMFAVSGTYHRVNWTSATARKWMKRADHSMIFLFIAGSYTPFALLALPENDG 132
Query 132 RVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLF 191
V+L IVWGGA+AG+ LKM WP++PR +GVPLY+LLGWVAVW+ I+H AGV A+VLL
Sbjct 133 MVLLWIVWGGALAGVALKMLWPSSPRWLGVPLYILLGWVAVWFIGPIMHGAGVAAVVLLI 192
Query 192 VGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
VGGALYSIGG+LYA++WP+PWPTTFG+HEFFHACTAVAAICHYIAMWF VF
Sbjct 193 VGGALYSIGGVLYALKWPNPWPTTFGHHEFFHACTAVAAICHYIAMWFAVF 243
>gi|145222642|ref|YP_001133320.1| hemolysin III family channel protein [Mycobacterium gilvum PYR-GCK]
gi|145215128|gb|ABP44532.1| channel protein, hemolysin III family [Mycobacterium gilvum PYR-GCK]
Length=250
Score = 334 bits (857), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 160/231 (70%), Positives = 189/231 (82%), Gaps = 0/231 (0%)
Query 12 EARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTT 71
++ P + EGVA+ KPR RGWIHVYSA AV+ G++LVAVSW+ S ++G+ T
Sbjct 20 RSQGPEDLPEAVAEGVAQFFGKPRLRGWIHVYSAVIAVICGSALVAVSWSAQSTRSGIAT 79
Query 72 LAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDG 131
L YT + MF VS TYHRVNW SATAR WMKRADHSMIF+FIAGSYTPFALLALP +DG
Sbjct 80 LIYTLTIVAMFAVSGTYHRVNWTSATARKWMKRADHSMIFLFIAGSYTPFALLALPENDG 139
Query 132 RVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLF 191
V+L IVWGGA+AG+ LKM WP++PR +GVPLY+LLGWVAVW+ I+H AGV A+VLL
Sbjct 140 MVLLWIVWGGALAGVALKMLWPSSPRWLGVPLYILLGWVAVWFIGPIMHGAGVAAVVLLI 199
Query 192 VGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
VGGALYSIGG+LYA++WP+PWPTTFG+HEFFHACTAVAAICHYIAMWF VF
Sbjct 200 VGGALYSIGGVLYALKWPNPWPTTFGHHEFFHACTAVAAICHYIAMWFAVF 250
>gi|118464088|ref|YP_880456.1| channel protein, hemolysin III family protein [Mycobacterium
avium 104]
gi|254774093|ref|ZP_05215609.1| channel protein, hemolysin III family protein [Mycobacterium
avium subsp. avium ATCC 25291]
gi|118165375|gb|ABK66272.1| channel protein, hemolysin III family protein [Mycobacterium
avium 104]
Length=257
Score = 333 bits (855), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/246 (69%), Positives = 189/246 (77%), Gaps = 4/246 (1%)
Query 1 MSGQADTATTAE----ARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLV 56
MS Q TA E A P + LVEG A+VL KPR RGWIH YSA AV+ GA+LV
Sbjct 1 MSSQTSTAPNPEPDHEAIVPGNTVEQLVEGAAQVLGKPRMRGWIHFYSAWLAVITGATLV 60
Query 57 AVSWAVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAG 116
+VSWA S +AG +TL Y AAT+ +F VSATYHRV WK+ AR MKR DHSMIFVFIAG
Sbjct 61 SVSWAAASPRAGHSTLIYAAATVALFAVSATYHRVKWKTEAARTRMKRLDHSMIFVFIAG 120
Query 117 SYTPFALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTA 176
SYTPFA L +P + G VVL IVWGGA+AGI LK+CWP APR +GVPLYLLLGWVA+WY
Sbjct 121 SYTPFARLVMPQNTGVVVLCIVWGGALAGIALKVCWPTAPRWLGVPLYLLLGWVAIWYAP 180
Query 177 TILHNAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIA 236
TILH AGV A+VLL VGG LYS+GGI YA+RWPDPWP+TFGYHEFFHA TA+AAI HYIA
Sbjct 181 TILHQAGVAAMVLLAVGGVLYSVGGIFYALRWPDPWPSTFGYHEFFHALTAIAAILHYIA 240
Query 237 MWFVVF 242
MWF VF
Sbjct 241 MWFAVF 246
>gi|336458705|gb|EGO37665.1| channel protein, hemolysin III family [Mycobacterium avium subsp.
paratuberculosis S397]
Length=257
Score = 333 bits (853), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/246 (69%), Positives = 189/246 (77%), Gaps = 4/246 (1%)
Query 1 MSGQADTATTAE----ARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLV 56
MS Q TA E A P + LVEG A+VL KPR RGWIH YSA AV+ GA+LV
Sbjct 1 MSSQTSTAPNPEPDHEAIVPGNTVEQLVEGAAQVLGKPRMRGWIHFYSAWLAVITGATLV 60
Query 57 AVSWAVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAG 116
+VSWA S +AG +TL Y AAT+ +F VSATYHRV WK+ AR MKR DHSMIFVFIAG
Sbjct 61 SVSWAAASPRAGHSTLIYAAATVALFAVSATYHRVKWKTEAARTRMKRLDHSMIFVFIAG 120
Query 117 SYTPFALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTA 176
SYTPFA L +P + G VVL IVWGGA+AGI LK+CWP APR +GVPLYLLLGWVA+WY
Sbjct 121 SYTPFARLVMPQNTGVVVLCIVWGGALAGIALKVCWPTAPRWLGVPLYLLLGWVAIWYAP 180
Query 177 TILHNAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIA 236
TILH AGV A+VLL VGG LYS+GGI YA+RWPDPWP+TFGYHEFFHA TA+AAI HYIA
Sbjct 181 TILHQAGVAAMVLLAVGGVLYSVGGIFYALRWPDPWPSTFGYHEFFHALTAIAAILHYIA 240
Query 237 MWFVVF 242
MWF VF
Sbjct 241 MWFAVF 246
>gi|41408802|ref|NP_961638.1| hypothetical protein MAP2704 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41397161|gb|AAS05021.1| hypothetical protein MAP_2704 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=257
Score = 331 bits (848), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 167/246 (68%), Positives = 188/246 (77%), Gaps = 4/246 (1%)
Query 1 MSGQADTATTAE----ARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLV 56
MS Q TA E A P + L EG A+VL KPR RGWIH YSA AV+ GA+LV
Sbjct 1 MSSQTSTAPNPEPDHEAIVPGNTVEQLFEGAAQVLGKPRMRGWIHFYSAWLAVITGATLV 60
Query 57 AVSWAVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAG 116
+VSWA S +AG +TL Y AAT+ +F VSATYHRV WK+ AR MKR DHSMIFVFIAG
Sbjct 61 SVSWAAASPRAGHSTLIYAAATVALFAVSATYHRVKWKTEAARTRMKRLDHSMIFVFIAG 120
Query 117 SYTPFALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTA 176
SYTPFA L +P + G VVL IVWGGA+AGI LK+CWP APR +GVPLYLLLGWVA+WY
Sbjct 121 SYTPFARLVMPQNTGVVVLCIVWGGALAGIALKVCWPTAPRWLGVPLYLLLGWVAIWYAP 180
Query 177 TILHNAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIA 236
TILH AGV A+VLL VGG LYS+GGI YA+RWPDPWP+TFGYHEFFHA TA+AAI HYIA
Sbjct 181 TILHQAGVAAMVLLAVGGVLYSVGGIFYALRWPDPWPSTFGYHEFFHALTAIAAILHYIA 240
Query 237 MWFVVF 242
MWF VF
Sbjct 241 MWFAVF 246
>gi|120405615|ref|YP_955444.1| hemolysin III family channel protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958433|gb|ABM15438.1| channel protein, hemolysin III family [Mycobacterium vanbaalenii
PYR-1]
Length=243
Score = 330 bits (847), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 161/234 (69%), Positives = 185/234 (80%), Gaps = 0/234 (0%)
Query 9 TTAEARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAG 68
T P + EGVA+ L KPR RGWIHVYSA AV+ G +LVAVSW++ S +AG
Sbjct 10 TADSPGEPEDLPEAVAEGVAQFLGKPRLRGWIHVYSAVIAVICGVTLVAVSWSLESTRAG 69
Query 69 LTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPA 128
+ TL YT + MFTVS YHRVNW S TAR WMKRADHSMIF+FIAGSYTPFALLALP
Sbjct 70 IATLIYTLTIVAMFTVSGVYHRVNWTSVTARKWMKRADHSMIFLFIAGSYTPFALLALPE 129
Query 129 HDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALV 188
DG V+L IVW GA+AG+ LKM WP++PR +GVPLY+LLGWVAVW+ I H AGV A+V
Sbjct 130 RDGMVLLWIVWAGALAGVALKMLWPSSPRWLGVPLYILLGWVAVWFIGPIAHGAGVAAVV 189
Query 189 LLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
LL VGGALYSIGG+LYA++WP+PWPTTFG+HEFFHACTAVAAICHYIAMWF VF
Sbjct 190 LLIVGGALYSIGGVLYALKWPNPWPTTFGHHEFFHACTAVAAICHYIAMWFAVF 243
>gi|296169954|ref|ZP_06851561.1| hly-III family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295895358|gb|EFG75064.1| hly-III family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=262
Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/249 (66%), Positives = 185/249 (75%), Gaps = 7/249 (2%)
Query 1 MSGQADTATT-------AEARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGA 53
MS Q T+ +EA P + LVEG VLTKPR RGWIH YSA A++ GA
Sbjct 1 MSSQTSTSANPERSDEDSEAIAPGNTVDQLVEGATNVLTKPRMRGWIHFYSAWLAIITGA 60
Query 54 SLVAVSWAVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVF 113
+LV+VSWA S +AG +TL Y AAT+ MF VSATYHRV WKS ARN MKR DHSMIFVF
Sbjct 61 TLVSVSWAASSPRAGHSTLVYAAATVAMFAVSATYHRVQWKSEAARNLMKRLDHSMIFVF 120
Query 114 IAGSYTPFALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVW 173
IAGSYTPFA LA+P G +V IVWGGA AGILLK+CWP APR +GVPLY++LGWVAVW
Sbjct 121 IAGSYTPFARLAMPQKTGMLVECIVWGGAAAGILLKVCWPTAPRWLGVPLYIVLGWVAVW 180
Query 174 YTATILHNAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICH 233
+ TILH AGV A+VLL GG YS+GGI YA+RWPDPWP+TFGYHE FHA T VAAI H
Sbjct 181 FCPTILHEAGVAAMVLLATGGVFYSVGGIFYALRWPDPWPSTFGYHEIFHAFTVVAAILH 240
Query 234 YIAMWFVVF 242
YIAMWF VF
Sbjct 241 YIAMWFAVF 249
>gi|108801102|ref|YP_641299.1| hemolysin III family channel protein [Mycobacterium sp. MCS]
gi|119870243|ref|YP_940195.1| hemolysin III family channel protein [Mycobacterium sp. KMS]
gi|126436940|ref|YP_001072631.1| hemolysin III family channel protein [Mycobacterium sp. JLS]
gi|108771521|gb|ABG10243.1| channel protein, hemolysin III family [Mycobacterium sp. MCS]
gi|119696332|gb|ABL93405.1| channel protein, hemolysin III family [Mycobacterium sp. KMS]
gi|126236740|gb|ABO00141.1| channel protein, hemolysin III family [Mycobacterium sp. JLS]
Length=247
Score = 325 bits (834), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 162/245 (67%), Positives = 189/245 (78%), Gaps = 3/245 (1%)
Query 1 MSGQADTATTAEARTPAHAAHH---LVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVA 57
M+ + E R+PA + E VA+ + KPR RGWIHVYSA AV+ GA+LV+
Sbjct 1 MTTPSTPIDADEPRSPADPEDFPEAVAERVAQFIGKPRARGWIHVYSAVVAVICGATLVS 60
Query 58 VSWAVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGS 117
VSWAV S +AG+ TL YT + MF VS TYHRVNW+S AR WMKRADHSMIF+FIAGS
Sbjct 61 VSWAVVSTRAGIATLIYTLTIVAMFAVSGTYHRVNWRSPVARKWMKRADHSMIFIFIAGS 120
Query 118 YTPFALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTAT 177
YTPFALLALP G V+ IVWGGA+AG+LLKM WP+AP VGVPLYLLLGWVA W+
Sbjct 121 YTPFALLALPEGKGMVLFWIVWGGALAGVLLKMFWPSAPAWVGVPLYLLLGWVAAWFIGP 180
Query 178 ILHNAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAM 237
I+ AGV+A+VLL VGGALYSIGG+LY ++WP+PWPTTFG+HEFFHACTAVAAICHYIAM
Sbjct 181 IMDGAGVSAVVLLIVGGALYSIGGVLYGLKWPNPWPTTFGHHEFFHACTAVAAICHYIAM 240
Query 238 WFVVF 242
WF VF
Sbjct 241 WFAVF 245
>gi|118472546|ref|YP_889503.1| channel protein, hemolysin III family protein [Mycobacterium
smegmatis str. MC2 155]
gi|118173833|gb|ABK74729.1| channel protein, hemolysin III family protein [Mycobacterium
smegmatis str. MC2 155]
Length=256
Score = 323 bits (829), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 162/241 (68%), Positives = 188/241 (79%), Gaps = 2/241 (0%)
Query 2 SGQADTATTAEARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSWA 61
S AD A + AA + +GVA+ KPR RGWIHVYSA A++AGA+LV+VSW+
Sbjct 18 SAAADAAGSQRQAEDLPAA--VADGVAQFFGKPRARGWIHVYSAIVALIAGAALVSVSWS 75
Query 62 VGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPF 121
V S +AGL TL YT + MFTVS YHRVNW S TAR WMKR DHSMIF+FIAGSYTPF
Sbjct 76 VQSTRAGLATLLYTFTIVAMFTVSGVYHRVNWTSVTARKWMKRLDHSMIFLFIAGSYTPF 135
Query 122 ALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHN 181
ALLALP G V+ IVWGGAIAG+LLKM WP+APR +GVPLY+LLGWVA W+ I+
Sbjct 136 ALLALPESKGMVLFWIVWGGAIAGVLLKMFWPSAPRWLGVPLYILLGWVAAWFIGPIMDG 195
Query 182 AGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFVV 241
AGV A+VLL VGGALYS+GG+LYA++WP+PWP TFG+HEFFHACTAVAAICHYIAMWF V
Sbjct 196 AGVAAVVLLIVGGALYSVGGVLYALKWPNPWPATFGHHEFFHACTAVAAICHYIAMWFAV 255
Query 242 F 242
F
Sbjct 256 F 256
>gi|342861677|ref|ZP_08718323.1| channel protein, hemolysin III family protein [Mycobacterium
colombiense CECT 3035]
gi|342130811|gb|EGT84107.1| channel protein, hemolysin III family protein [Mycobacterium
colombiense CECT 3035]
Length=257
Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/246 (67%), Positives = 184/246 (75%), Gaps = 4/246 (1%)
Query 1 MSGQADTATTA----EARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLV 56
MS Q T T E+ P + VEG A+ L KPR RGWIH SA A++ GA+LV
Sbjct 1 MSSQTSTVPTPDPEPESIVPGNTVEQFVEGAAQFLGKPRMRGWIHFVSAWLAIITGATLV 60
Query 57 AVSWAVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAG 116
+VSWA+ S +AG +TL Y AAT+ MF VSATYHRV+WKS AR+ MKR DHSMIFVFIAG
Sbjct 61 SVSWALSSPRAGHSTLVYAAATVAMFAVSATYHRVHWKSDVARSRMKRLDHSMIFVFIAG 120
Query 117 SYTPFALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTA 176
SYTPFA L +P + G +V IVWGGA AGI LKMCWP APR VGVPLYLLLGWVAVW+
Sbjct 121 SYTPFARLVMPQNTGVLVQCIVWGGAAAGITLKMCWPTAPRWVGVPLYLLLGWVAVWFAP 180
Query 177 TILHNAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIA 236
TILH AGV A+VLL VGG YS+GGI Y +RWPDPWP TFGYHEFFHA TA+AAI HYIA
Sbjct 181 TILHQAGVAAMVLLAVGGVFYSVGGIFYGLRWPDPWPKTFGYHEFFHAFTAIAAILHYIA 240
Query 237 MWFVVF 242
MWF VF
Sbjct 241 MWFAVF 246
>gi|254819723|ref|ZP_05224724.1| channel protein, hemolysin III family protein [Mycobacterium
intracellulare ATCC 13950]
Length=257
Score = 316 bits (810), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 161/246 (66%), Positives = 181/246 (74%), Gaps = 4/246 (1%)
Query 1 MSGQADTATTAEAR----TPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLV 56
MS Q T E P + L EG A VL KPR RGWIH YSA A++AGA+LV
Sbjct 1 MSSQTSTVPHPEREPEPIAPGNTVERLAEGAANVLGKPRMRGWIHFYSAWLAIIAGATLV 60
Query 57 AVSWAVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAG 116
+VSWA S +AG +TL Y A T+ +F VSATYHRV+WKS AR MKR DHSMIF+FIAG
Sbjct 61 SVSWAASSPRAGHSTLIYAACTVALFAVSATYHRVHWKSDLARIRMKRLDHSMIFIFIAG 120
Query 117 SYTPFALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTA 176
SYTPFA L +P G VVL IVWGGA+AGI LK+CWP APR +GVPLYLLLGWVA+WY
Sbjct 121 SYTPFARLVMPQDTGVVVLCIVWGGALAGIALKVCWPTAPRWLGVPLYLLLGWVAIWYAP 180
Query 177 TILHNAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIA 236
TILH AGV A+VLL VGG YS+GGI Y +RWPD WP TFGYHEFFHA TA+AAI HYIA
Sbjct 181 TILHQAGVAAMVLLAVGGVFYSVGGIFYGLRWPDLWPRTFGYHEFFHAFTAIAAILHYIA 240
Query 237 MWFVVF 242
MWF VF
Sbjct 241 MWFAVF 246
>gi|169628301|ref|YP_001701950.1| hypothetical protein MAB_1208c [Mycobacterium abscessus ATCC
19977]
gi|169240268|emb|CAM61296.1| Conserved hypothetical protein (hemolysin?) [Mycobacterium abscessus]
Length=246
Score = 298 bits (763), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 148/239 (62%), Positives = 180/239 (76%), Gaps = 3/239 (1%)
Query 4 QADTATTAEARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVG 63
+A A T+E P A LV G+ + KP+ RGWIH Y+ A++ G LV+V+W++
Sbjct 10 EAPEAPTSELSIPMAA---LVGGIETLPIKPKARGWIHFYACVIAIVTGIVLVSVAWSLR 66
Query 64 SAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFAL 123
S KAGL T Y+ + +F VSA YHRVNW S T R WMKR DHSMIFVFIAGSYTPFA+
Sbjct 67 SPKAGLATAIYSLTVLGVFGVSAAYHRVNWTSPTTRTWMKRLDHSMIFVFIAGSYTPFAM 126
Query 124 LALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAG 183
LA+P +G +VL+IVWGGA+AG++LKMCWP APR VGVPLYLLLGWVAV + T+L+ AG
Sbjct 127 LAMPPSEGNLVLAIVWGGALAGVILKMCWPTAPRWVGVPLYLLLGWVAVGFFPTLLNGAG 186
Query 184 VTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
V A+VLL VGGALYSIG ILYA +WP+PWP FG+HEFFHA T +AA CHYIA+WF VF
Sbjct 187 VAAVVLLIVGGALYSIGAILYAAKWPNPWPLHFGHHEFFHAATVIAATCHYIAVWFAVF 245
>gi|289761223|ref|ZP_06520601.1| LOW QUALITY PROTEIN: hypothetical hemolysin-like protein [Mycobacterium
tuberculosis GM 1503]
gi|289708729|gb|EFD72745.1| LOW QUALITY PROTEIN: hypothetical hemolysin-like protein [Mycobacterium
tuberculosis GM 1503]
Length=169
Score = 290 bits (741), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/149 (99%), Positives = 149/149 (100%), Gaps = 0/149 (0%)
Query 1 MSGQADTATTAEARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSW 60
MSGQADTATTAEARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSW
Sbjct 1 MSGQADTATTAEARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSW 60
Query 61 AVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTP 120
AVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTP
Sbjct 61 AVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTP 120
Query 121 FALLALPAHDGRVVLSIVWGGAIAGILLK 149
FALLALPAHDGRVVLSIVWGGAIAGILL+
Sbjct 121 FALLALPAHDGRVVLSIVWGGAIAGILLR 149
>gi|167966577|ref|ZP_02548854.1| hypothetical hemolysin-like protein [Mycobacterium tuberculosis
H37Ra]
Length=164
Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/145 (100%), Positives = 145/145 (100%), Gaps = 0/145 (0%)
Query 1 MSGQADTATTAEARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSW 60
MSGQADTATTAEARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSW
Sbjct 17 MSGQADTATTAEARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSW 76
Query 61 AVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTP 120
AVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTP
Sbjct 77 AVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTP 136
Query 121 FALLALPAHDGRVVLSIVWGGAIAG 145
FALLALPAHDGRVVLSIVWGGAIAG
Sbjct 137 FALLALPAHDGRVVLSIVWGGAIAG 161
>gi|333989672|ref|YP_004522286.1| hemolysin-like protein [Mycobacterium sp. JDM601]
gi|333485640|gb|AEF35032.1| hemolysin-like protein [Mycobacterium sp. JDM601]
Length=237
Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/209 (67%), Positives = 173/209 (83%), Gaps = 1/209 (0%)
Query 32 TKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVSATYHRV 91
T+PR RGWIH+ SA AV+AGA+L+ V+W + +AGL TLAYT + + MF VSATYHRV
Sbjct 25 TRPRARGWIHLVSAIVAVIAGAALIGVTWPLAGLEAGLATLAYTISVVGMFAVSATYHRV 84
Query 92 NWKSATARNWMKRADHSMIFVFIAGSYTPFALLALP-AHDGRVVLSIVWGGAIAGILLKM 150
WKS +AR MKR DH+MIF+FIAG+YTPFALLA+ R+V++IVWGGA+AG++LK+
Sbjct 85 TWKSVSARIRMKRLDHAMIFIFIAGTYTPFALLAMDHGAQERLVMTIVWGGALAGVVLKL 144
Query 151 CWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYAVRWPD 210
CWP AP+ VGVPLYLLLGWV+ ++ ATI+HNAGV A+VLL VGG LYSIG I+YA++WPD
Sbjct 145 CWPTAPKWVGVPLYLLLGWVSAFFIATIMHNAGVAAMVLLTVGGMLYSIGAIMYALKWPD 204
Query 211 PWPTTFGYHEFFHACTAVAAICHYIAMWF 239
PWP TFGYHEFFHACTAVAA C Y+A+WF
Sbjct 205 PWPQTFGYHEFFHACTAVAAACQYVAIWF 233
>gi|229493942|ref|ZP_04387714.1| channel protein, hemolysin III family [Rhodococcus erythropolis
SK121]
gi|229319219|gb|EEN85068.1| channel protein, hemolysin III family [Rhodococcus erythropolis
SK121]
Length=222
Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 129/217 (60%), Positives = 160/217 (74%), Gaps = 0/217 (0%)
Query 26 GVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVS 85
G+ + KPR RGWIH+++ G +V+AG LV+V+ A AKA T Y+ +F +S
Sbjct 5 GLDELPVKPRMRGWIHLWALGVSVVAGIVLVSVAGAQVGAKAAWATAIYSVTICGLFGIS 64
Query 86 ATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAIAG 145
ATYHR+ W++ R WMKRADHSMIF+FIAGSYTPFA+L LP H G+++L+IVW GA+AG
Sbjct 65 ATYHRIQWQTVKGRTWMKRADHSMIFLFIAGSYTPFAMLGLPTHTGKIILAIVWAGALAG 124
Query 146 ILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYA 205
+ LKM WP AP+ VGVPLYLLLGW V + H GV +VLL VGG YS+G ILYA
Sbjct 125 VALKMLWPTAPKWVGVPLYLLLGWAIVPVVGELTHQVGVAPMVLLLVGGIFYSVGAILYA 184
Query 206 VRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
+WP+PWPTTFG+HEFFHA T VAAICHYIA+W VVF
Sbjct 185 TKWPNPWPTTFGHHEFFHAATVVAAICHYIAVWLVVF 221
>gi|226307743|ref|YP_002767703.1| hypothetical protein RER_42560 [Rhodococcus erythropolis PR4]
gi|226186860|dbj|BAH34964.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length=229
Score = 271 bits (692), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 129/222 (59%), Positives = 161/222 (73%), Gaps = 0/222 (0%)
Query 21 HHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATIT 80
H G+ + KPR RGWIH+++ G +V+AG LV+V+ A AKA T Y+
Sbjct 7 HMTAFGLDELPVKPRMRGWIHLWALGVSVVAGIVLVSVAGAQVGAKAAWATAIYSITICG 66
Query 81 MFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWG 140
+F +SATYHR+ W++ R WMKRADHSMIF+FIAGSYTPFA+L LP H G+++L+IVW
Sbjct 67 LFGISATYHRIQWQTVKGRTWMKRADHSMIFLFIAGSYTPFAMLGLPTHTGKIILAIVWA 126
Query 141 GAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIG 200
GA+AG+ LKM WP AP+ VGVPLYLLLGW V + H GV +VLL VGG YS+G
Sbjct 127 GALAGVALKMLWPTAPKWVGVPLYLLLGWAIVPVVGELTHQVGVAPMVLLLVGGIFYSVG 186
Query 201 GILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
ILYA +WP+PWPTTFG+HEFFHA T +AAICHYIA+W VVF
Sbjct 187 AILYATKWPNPWPTTFGHHEFFHAATVIAAICHYIAVWLVVF 228
>gi|111022818|ref|YP_705790.1| hemolytic factor [Rhodococcus jostii RHA1]
gi|110822348|gb|ABG97632.1| possible hemolytic factor [Rhodococcus jostii RHA1]
Length=222
Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/217 (59%), Positives = 159/217 (74%), Gaps = 0/217 (0%)
Query 26 GVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVS 85
G+ + KPR RGWIH+++ G +V+AG LV +S S +A L T Y+ +F VS
Sbjct 5 GLDELPVKPRLRGWIHLWAFGVSVIAGIVLVTLSGTQVSGEAALATAVYSLTVCGVFGVS 64
Query 86 ATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAIAG 145
ATYHR++W + +AR WMKRADHSMIF+FIAGSYTPFA+L LP GR +L +VW GA+AG
Sbjct 65 ATYHRIHWNTVSARTWMKRADHSMIFLFIAGSYTPFAVLGLPPDTGRTLLIVVWAGALAG 124
Query 146 ILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYA 205
+ LKM WP APR VGVPLYLLLGW V + H GV +VLL +GG LYS+G ILYA
Sbjct 125 VALKMLWPTAPRWVGVPLYLLLGWAIVPVAPELTHEVGVVPMVLLLIGGILYSVGAILYA 184
Query 206 VRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
+WP+PWPTTFG+HEFFHA T +AA+CHYIA+W VVF
Sbjct 185 TKWPNPWPTTFGHHEFFHAATVIAALCHYIAVWLVVF 221
>gi|312138737|ref|YP_004006073.1| hemolysin-iii like protein [Rhodococcus equi 103S]
gi|325676570|ref|ZP_08156248.1| hemolysin III family channel protein [Rhodococcus equi ATCC 33707]
gi|311888076|emb|CBH47388.1| secreted hemolysin-III like protein [Rhodococcus equi 103S]
gi|325552748|gb|EGD22432.1| hemolysin III family channel protein [Rhodococcus equi ATCC 33707]
Length=222
Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/217 (59%), Positives = 158/217 (73%), Gaps = 0/217 (0%)
Query 26 GVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVS 85
G+ + KPR RGWIH +S A+LA A LV++++ +AG+ TL Y +F VS
Sbjct 5 GLDDLPVKPRMRGWIHAWSLVVAILASAVLVSLAFTAEGPRAGIATLVYGVTVCGLFAVS 64
Query 86 ATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAIAG 145
TYHR++W + AR WMKRADHSMIF+FIAGSYTPF LLALP H G V+L++VW GA+AG
Sbjct 65 TTYHRIHWHTVRARTWMKRADHSMIFLFIAGSYTPFGLLALPPHTGAVLLTVVWCGALAG 124
Query 146 ILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYA 205
+ LKM WP APR VGVPLYLLLGW V ++ AGV +VLL VGG LYS G +LYA
Sbjct 125 VALKMLWPTAPRWVGVPLYLLLGWAIVPVAGELVDQAGVAPMVLLAVGGVLYSAGAVLYA 184
Query 206 VRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
+WP+PWP TFG+HEFFHA TAVAA+CH++A+ VVF
Sbjct 185 TKWPNPWPQTFGHHEFFHAATAVAALCHFVAVCLVVF 221
>gi|226365326|ref|YP_002783109.1| hemolysin III family protein [Rhodococcus opacus B4]
gi|226243816|dbj|BAH54164.1| putative hemolysin III family protein [Rhodococcus opacus B4]
Length=222
Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/217 (59%), Positives = 160/217 (74%), Gaps = 0/217 (0%)
Query 26 GVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVS 85
G+ + KPR RGWIH+++ G +V+AG LV +S S +A L T Y+ +F VS
Sbjct 5 GLDELPVKPRMRGWIHLWAFGVSVIAGLVLVTLSGTQVSGEAALATAVYSLTVCGVFGVS 64
Query 86 ATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAIAG 145
ATYHR++W + +AR WMKRADHSMIF+FIAGSYTPFA+L LPA GR +L +VW GA+AG
Sbjct 65 ATYHRIHWSTVSARTWMKRADHSMIFLFIAGSYTPFAVLGLPAETGRTLLIVVWAGALAG 124
Query 146 ILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYA 205
+ LKM WP APR VGVPLYLLLGW V + H GV ++LL +GG LYS+G ILYA
Sbjct 125 VALKMLWPTAPRWVGVPLYLLLGWAIVPVAPELTHEVGVLPMLLLLIGGILYSVGAILYA 184
Query 206 VRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
+WP+PWPTTFG+HEFFHA T +AA+CHYIA+W VVF
Sbjct 185 TKWPNPWPTTFGHHEFFHAATVIAALCHYIAVWLVVF 221
>gi|333921071|ref|YP_004494652.1| putative hemolytic factor [Amycolicicoccus subflavus DQS3-9A1]
gi|333483291|gb|AEF41851.1| Possible hemolytic factor [Amycolicicoccus subflavus DQS3-9A1]
Length=208
Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 125/206 (61%), Positives = 154/206 (75%), Gaps = 0/206 (0%)
Query 37 RGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSA 96
RGWIH+Y+ +V+ G +LVAV A+ + +A + T Y+A +F VSA YHRV+WKSA
Sbjct 2 RGWIHLYAFAISVVTGTTLVAVVGALTTPRALIATAIYSATVCGVFGVSALYHRVHWKSA 61
Query 97 TARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAP 156
AR WMKRADHSMIF+FIAGSYTPF +LAL GR VL+IVW GA AG+ LKM WP +P
Sbjct 62 RARMWMKRADHSMIFLFIAGSYTPFGMLALSPETGRTVLAIVWAGAFAGVALKMLWPTSP 121
Query 157 RSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTF 216
+GVPLY+LLGWV + ++ NAG+ L+LL VGG LYS G ILYA +WP+PWPTTF
Sbjct 122 SWLGVPLYILLGWVVAFVIPDLVANAGMAPLILLAVGGVLYSAGAILYATKWPNPWPTTF 181
Query 217 GYHEFFHACTAVAAICHYIAMWFVVF 242
G+HEFFHA T +AAICHYIA+W V F
Sbjct 182 GHHEFFHAATVIAAICHYIAVWLVAF 207
>gi|296394379|ref|YP_003659263.1| channel protein, hemolysin III family [Segniliparus rotundus
DSM 44985]
gi|296181526|gb|ADG98432.1| channel protein, hemolysin III family [Segniliparus rotundus
DSM 44985]
Length=233
Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/233 (52%), Positives = 156/233 (67%), Gaps = 9/233 (3%)
Query 9 TTAEARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAG 68
T +++R PA A+ V KPR RGWIHV++ +V+ G +LV + A+AG
Sbjct 6 TESDSRGPAPAS---------VPVKPRMRGWIHVWACAASVVCGIALVGFAATHAGARAG 56
Query 69 LTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPA 128
T Y+ MF VSATYHR++WK+ +R MKR DHSMIF+FIAG+YTPF L L
Sbjct 57 FATALYSLTVCAMFGVSATYHRIHWKTPQSRGLMKRLDHSMIFLFIAGTYTPFCYLLLQP 116
Query 129 HDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALV 188
+LS+VW GA+AG +LK+C+P + + +GV LYL LGWV V+ T IL GV +
Sbjct 117 GTYHWILSVVWAGAVAGAVLKVCFPHSTKWLGVVLYLALGWVCVFVTPEILSKGGVVPVA 176
Query 189 LLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFVV 241
LL VGG LYS G ILYA +WP+PWP TFG+HEFFHA TA+AAICH+IA+WF V
Sbjct 177 LLAVGGVLYSFGAILYATKWPNPWPKTFGHHEFFHAATAIAAICHHIAVWFAV 229
>gi|302530105|ref|ZP_07282447.1| hemolysin III family channel protein [Streptomyces sp. AA4]
gi|302439000|gb|EFL10816.1| hemolysin III family channel protein [Streptomyces sp. AA4]
Length=224
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/211 (57%), Positives = 150/211 (72%), Gaps = 1/211 (0%)
Query 32 TKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVSATYHRV 91
T+PR RG IH +S AV A A+L++++ A S A L T Y + +F VSA YHR
Sbjct 14 TRPRLRGHIHFWSFFGAVAAAATLISLAAATVSPVAALATSVYGLTVLGVFGVSALYHRR 73
Query 92 NWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAIAGILLKMC 151
W S A WMKRADHSMIF+FIAG+YTPF LLA+ G +VL IVWGGAI G+ +KM
Sbjct 74 LW-SPRAYKWMKRADHSMIFLFIAGTYTPFTLLAMSKPTGYIVLGIVWGGAILGVAMKML 132
Query 152 WPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYAVRWPDP 211
WP APR +GVP+Y+ LGWVAV+ +L +AGV ALVLL VGG Y++G + YAV+WP+
Sbjct 133 WPHAPRWLGVPIYIALGWVAVFVLPELLSHAGVAALVLLCVGGLFYTVGAVFYAVKWPNH 192
Query 212 WPTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
WP TFGYHEFFHACT +AA+ HYIA+W ++
Sbjct 193 WPETFGYHEFFHACTVLAAVSHYIAIWLAMY 223
>gi|284989527|ref|YP_003408081.1| hemolysin III family channel protein [Geodermatophilus obscurus
DSM 43160]
gi|284062772|gb|ADB73710.1| channel protein, hemolysin III family [Geodermatophilus obscurus
DSM 43160]
Length=270
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/213 (56%), Positives = 155/213 (73%), Gaps = 6/213 (2%)
Query 32 TKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVSATYHRV 91
T+PR RGW+H++S A++AGA L+ + +G A+AG++ Y+ +F +SA YHR
Sbjct 57 TRPRMRGWLHLFSFFGAIVAGAVLIPLGSVLG-ARAGVSVTVYSVTICGLFGISALYHRR 115
Query 92 NWKSATARNW--MKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAIAGILLK 149
W + R W MKR DHSMIF+FIAG+YTPFALLA+ G VL+ VW GA+AG+ LK
Sbjct 116 RW---SPRGWKIMKRLDHSMIFLFIAGTYTPFALLAVDQPTGYWVLAGVWAGALAGVFLK 172
Query 150 MCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYAVRWP 209
+ WP APR VGVPLY+ LGWVAV+ ILH AGVT+LVLL VGG LY++GG+ YA++ P
Sbjct 173 LTWPTAPRWVGVPLYIGLGWVAVFILTDILHIAGVTSLVLLAVGGVLYTLGGVAYAIKKP 232
Query 210 DPWPTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
+PWP FGYHE FHA T VAAICHYIA++F ++
Sbjct 233 NPWPGVFGYHEVFHAMTVVAAICHYIAVYFAMY 265
>gi|134097518|ref|YP_001103179.1| hemolysin III family channel protein [Saccharopolyspora erythraea
NRRL 2338]
gi|291009341|ref|ZP_06567314.1| hemolysin III family channel protein [Saccharopolyspora erythraea
NRRL 2338]
gi|133910141|emb|CAM00254.1| channel protein, hemolysin III family [Saccharopolyspora erythraea
NRRL 2338]
Length=221
Score = 228 bits (580), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 120/212 (57%), Positives = 153/212 (73%), Gaps = 0/212 (0%)
Query 31 LTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVSATYHR 90
+ KPR RGWIH +S + AG +L+A++ + SA A L T Y + +F VSA YHR
Sbjct 9 IVKPRLRGWIHFWSLVVSAAAGTTLIALAGSTVSAAAALGTSIYVVTVLGLFGVSALYHR 68
Query 91 VNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAIAGILLKM 150
WKS AR WM+R DHSMIF+FIAG+YTPFA+LA+ G VVL++VWGGA+ G++LK+
Sbjct 69 KTWKSVGARTWMRRLDHSMIFLFIAGTYTPFAMLAMQPTTGAVVLAVVWGGALGGVVLKL 128
Query 151 CWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYAVRWPD 210
WP APR VGVP+Y+ LGWVAV+ +L NAGV ALVLL GG LY+ G I YA RWPD
Sbjct 129 AWPNAPRWVGVPVYIALGWVAVFVLPDLLQNAGVAALVLLLAGGVLYTAGAIFYATRWPD 188
Query 211 PWPTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
PWP TFGYHEFFHA + AA+CH++A+W ++
Sbjct 189 PWPKTFGYHEFFHAAVSSAAVCHHVAIWLALY 220
>gi|317508391|ref|ZP_07966063.1| hemolysin III family channel protein [Segniliparus rugosus ATCC
BAA-974]
gi|316253315|gb|EFV12713.1| hemolysin III family channel protein [Segniliparus rugosus ATCC
BAA-974]
Length=234
Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/209 (54%), Positives = 148/209 (71%), Gaps = 0/209 (0%)
Query 33 KPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVSATYHRVN 92
KPR RGWIH ++ +V+ G +LV+ + +A T Y+ MF VSA YHR
Sbjct 22 KPRMRGWIHAWACLISVVCGITLVSFAGGYAGPRAVGATAVYSLTVCAMFGVSAFYHRTQ 81
Query 93 WKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAIAGILLKMCW 152
W++A +R MKR DHSMIF+FIAG+YTPF L L R +LS+VW GA+AG++LK+C+
Sbjct 82 WQNAQSRGLMKRLDHSMIFLFIAGTYTPFCYLLLKPETYRWILSVVWIGALAGVVLKVCF 141
Query 153 PAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYAVRWPDPW 212
P + R +GV LYL+LGW++++ IL GVT +VLL VGGALYS+G +LYA +WP+PW
Sbjct 142 PHSTRWLGVVLYLVLGWISLFMLPEILAGGGVTPVVLLAVGGALYSVGAVLYATKWPNPW 201
Query 213 PTTFGYHEFFHACTAVAAICHYIAMWFVV 241
P TFG+HEFFHA T VAA+CH+IA+WF V
Sbjct 202 PRTFGHHEFFHAATVVAAVCHHIAIWFAV 230
>gi|296139251|ref|YP_003646494.1| hemolysin III family channel protein [Tsukamurella paurometabola
DSM 20162]
gi|296027385|gb|ADG78155.1| channel protein, hemolysin III family [Tsukamurella paurometabola
DSM 20162]
Length=218
Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 125/219 (58%), Positives = 145/219 (67%), Gaps = 4/219 (1%)
Query 24 VEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFT 83
V GV V KPR RG IH + A A+ G LV + SA AGL L Y +F
Sbjct 3 VVGVPEV--KPRLRGVIHQFGALGAIALGVPLVIAGFR-QSAGAGLALLVYAITVFGVFG 59
Query 84 VSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAI 143
VSA YHR W A R WMKRADH MIFVFIAGSYTP A+LALP+ R VL++VWGGA+
Sbjct 60 VSAAYHRGRWTDAQ-RIWMKRADHCMIFVFIAGSYTPIAVLALPSGVARWVLAVVWGGAL 118
Query 144 AGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGIL 203
AG+ LK+ WP APR VGVPLY+ LGWV V ++ AG TA LL +GG LYS G +L
Sbjct 119 AGVALKLLWPHAPRWVGVPLYIALGWVVVAVAGDLVDGAGWTASALLAIGGVLYSGGAVL 178
Query 204 YAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
YA RWPDPWP FG+HEFFHA T VAA+CHY AMW ++
Sbjct 179 YATRWPDPWPGVFGHHEFFHAATVVAALCHYAAMWIILL 217
>gi|343925094|ref|ZP_08764626.1| hypothetical protein GOALK_033_00850 [Gordonia alkanivorans NBRC
16433]
gi|343765025|dbj|GAA11552.1| hypothetical protein GOALK_033_00850 [Gordonia alkanivorans NBRC
16433]
Length=224
Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 119/212 (57%), Positives = 146/212 (69%), Gaps = 0/212 (0%)
Query 30 VLTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVSATYH 89
V +PR RG IH YSA A +AG +LV + + A A LT Y + +FTVSATYH
Sbjct 11 VADRPRLRGVIHHYSAYVAAVAGLALVIGAAILDGAVAALTCGIYAITVVGLFTVSATYH 70
Query 90 RVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAIAGILLK 149
R+ WK+A AR MKRADH+MIF+FIAG+YTPF L LP+ VL IVW GA+ G LLK
Sbjct 71 RIPWKTARARIRMKRADHAMIFLFIAGTYTPFCALGLPSPVSWWVLGIVWAGALGGSLLK 130
Query 150 MCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYAVRWP 209
+ WP APR +GV LY+LLGWV V ++ G ++LL +GG LYS+GG+LYAVRWP
Sbjct 131 ILWPGAPRWLGVTLYILLGWVIVVVAPALVEQTGYLIMILLALGGVLYSVGGVLYAVRWP 190
Query 210 DPWPTTFGYHEFFHACTAVAAICHYIAMWFVV 241
+PWP TFG+HE FH CTAVAA+ HY A W VV
Sbjct 191 NPWPRTFGHHEVFHLCTAVAALLHYAAAWLVV 222
>gi|256374862|ref|YP_003098522.1| channel protein, hemolysin III family [Actinosynnema mirum DSM
43827]
gi|255919165|gb|ACU34676.1| channel protein, hemolysin III family [Actinosynnema mirum DSM
43827]
Length=225
Score = 224 bits (572), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 115/210 (55%), Positives = 147/210 (70%), Gaps = 0/210 (0%)
Query 33 KPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVSATYHRVN 92
+PR RGW+H++S +V A+LVA++ SAKA +T Y + +F VSA YHRVN
Sbjct 15 RPRMRGWLHLWSFVVSVAMAATLVALAATTVSAKAAYSTAVYGITLMGLFGVSALYHRVN 74
Query 93 WKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAIAGILLKMCW 152
WKS AR WMKR DHSMIFVFIAGSYTPFAL A+P G VL +VW GA+ G+ LKM W
Sbjct 75 WKSVKARTWMKRMDHSMIFVFIAGSYTPFALTAMPPSTGHTVLWVVWLGALGGVALKMLW 134
Query 153 PAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYAVRWPDPW 212
P +PR +GVP+Y+ LGWVAV+ +L +AGV + L+ GG LY+IG + YA RWP+ W
Sbjct 135 PNSPRWLGVPIYVALGWVAVFTLPDMLAHAGVGVVALIIAGGLLYTIGAVFYATRWPNFW 194
Query 213 PTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
P FGYHEFFHA T +AA CH +A+W ++
Sbjct 195 PDVFGYHEFFHAMTVLAASCHCVAIWLSIY 224
>gi|108801621|ref|YP_641818.1| hemolysin III family channel protein [Mycobacterium sp. MCS]
gi|119870775|ref|YP_940727.1| hemolysin III family channel protein [Mycobacterium sp. KMS]
gi|108772040|gb|ABG10762.1| channel protein, hemolysin III family [Mycobacterium sp. MCS]
gi|119696864|gb|ABL93937.1| channel protein, hemolysin III family [Mycobacterium sp. KMS]
Length=270
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/218 (57%), Positives = 153/218 (71%), Gaps = 1/218 (0%)
Query 25 EGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSW-AVGSAKAGLTTLAYTAATITMFT 83
+ V ++ +PR RG IH+ SA AV+AGA+LV V+W S++AG L Y AA I MF
Sbjct 52 DPVDELIVRPRARGLIHLVSAVVAVVAGAALVEVAWTGSASSRAGWAALIYVAAIIAMFG 111
Query 84 VSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAI 143
VSA YHRV W S +A WM R DHS+IFVFIA +YTPFA+LALP G L+IVW GA
Sbjct 112 VSAAYHRVRWTSPSAEKWMMRLDHSVIFVFIAATYTPFAVLALPPDTGTKALTIVWTGAA 171
Query 144 AGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGIL 203
AG+ LKM WP+APR VGVPLYL+LG+VA+ + +L AG T + LL G LY+IG I
Sbjct 172 AGVALKMLWPSAPRWVGVPLYLMLGYVALLFAEALLIGAGFTVVALLAAGAVLYNIGAIF 231
Query 204 YAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFVV 241
Y VRWP+PWP TF +HEFFHA T AA+CH+ A+W V+
Sbjct 232 YGVRWPNPWPNTFAHHEFFHAFTVAAAVCHFAAIWLVI 269
>gi|126437605|ref|YP_001073296.1| hemolysin III family channel protein [Mycobacterium sp. JLS]
gi|126237405|gb|ABO00806.1| channel protein, hemolysin III family [Mycobacterium sp. JLS]
Length=270
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 121/218 (56%), Positives = 153/218 (71%), Gaps = 1/218 (0%)
Query 25 EGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSW-AVGSAKAGLTTLAYTAATITMFT 83
+ V ++ +PR RG IH+ SA AV+AGA+LV V+W S++AG + Y AA + MF
Sbjct 52 DPVDELVVRPRARGLIHLVSAVVAVVAGAALVEVAWTGSASSRAGWAAVIYVAAIVAMFG 111
Query 84 VSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAI 143
VSA YHRV W S +A WM R DHS+IFVFIA +YTPFA+LALP G L+IVW GA
Sbjct 112 VSAAYHRVRWTSPSAEKWMMRLDHSVIFVFIAATYTPFAVLALPPDTGAKALTIVWTGAA 171
Query 144 AGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGIL 203
AG+ LKM WP+APR VGVPLYL+LG+VA+ + +L AG T + LL G LY+IG I
Sbjct 172 AGVALKMLWPSAPRWVGVPLYLMLGYVALLFAEALLIGAGFTVVALLVAGAVLYNIGAIF 231
Query 204 YAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFVV 241
Y VRWP+PWP TF +HEFFHA T AA+CH+ A+W V+
Sbjct 232 YGVRWPNPWPNTFAHHEFFHAFTVAAAVCHFAAIWLVI 269
>gi|145592662|ref|YP_001156959.1| hemolysin III family channel protein [Salinispora tropica CNB-440]
gi|145301999|gb|ABP52581.1| channel protein, hemolysin III family [Salinispora tropica CNB-440]
Length=225
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/212 (55%), Positives = 143/212 (68%), Gaps = 1/212 (0%)
Query 31 LTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVSATYHR 90
L KPR RGW+H Y+ AV G L +++ A ++TL Y+ +F S YHR
Sbjct 14 LGKPRMRGWLHTYAFFVAVAGGIVLCSIAAARTGWSPLVSTLIYSLTVCGLFGTSGLYHR 73
Query 91 VNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAIAGILLKM 150
W S M+R DHSMIFVFIAG+YTPF +L L ++LS+VWGGA+ G+ LK+
Sbjct 74 RVW-SERGFQVMRRMDHSMIFVFIAGTYTPFCVLLLEPRPATIMLSLVWGGALGGVALKL 132
Query 151 CWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYAVRWPD 210
WP APR V PLYL LGWVAV ILH GVTALVLL VGGA+YSIG + YA+R P+
Sbjct 133 IWPHAPRWVSAPLYLALGWVAVAMLPDILHAGGVTALVLLIVGGAIYSIGAVSYALRRPN 192
Query 211 PWPTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
PWPT FG+HEFFHACT VAAICH+IA++F +F
Sbjct 193 PWPTVFGHHEFFHACTLVAAICHHIAIYFALF 224
>gi|159035766|ref|YP_001535019.1| hemolysin III family channel protein [Salinispora arenicola CNS-205]
gi|157914601|gb|ABV96028.1| channel protein, hemolysin III family [Salinispora arenicola
CNS-205]
Length=225
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/212 (54%), Positives = 144/212 (68%), Gaps = 1/212 (0%)
Query 31 LTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVSATYHR 90
L KPR RGW+H Y+ A++ GA L +++ + ++TL Y+ +F SA YHR
Sbjct 14 LGKPRMRGWLHAYAFFVALVCGAVLCSIAASRPGWSPLVSTLVYSLTVCGLFGTSALYHR 73
Query 91 VNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAIAGILLKM 150
W S M+R DHSMIFVFIAG+YTPF +L L ++LS+VWGGA+ G+ LK+
Sbjct 74 RVW-SERGYQVMRRMDHSMIFVFIAGTYTPFCVLLLEPRPATIMLSLVWGGALGGVALKL 132
Query 151 CWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYAVRWPD 210
WP APR V PLYL LGWVAV IL GVTALVLL VGGA+YS+G YA+R P+
Sbjct 133 IWPHAPRWVSAPLYLALGWVAVAMLPDILRAGGVTALVLLIVGGAIYSVGAFSYALRRPN 192
Query 211 PWPTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
PWPT FG+HEFFHACT VAAICH+IA++F +F
Sbjct 193 PWPTVFGHHEFFHACTLVAAICHHIAIYFALF 224
>gi|238062009|ref|ZP_04606718.1| hemolysin III family channel protein [Micromonospora sp. ATCC
39149]
gi|237883820|gb|EEP72648.1| hemolysin III family channel protein [Micromonospora sp. ATCC
39149]
Length=225
Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/210 (53%), Positives = 145/210 (70%), Gaps = 1/210 (0%)
Query 33 KPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVSATYHRVN 92
KPR RGW+H Y+ A++ G L +++ + ++ L Y+ +F SA YHR
Sbjct 16 KPRMRGWLHTYAFFVALVCGIVLCSIAASRPGWAPLVSCLIYSLTVCGLFGTSALYHRRV 75
Query 93 WKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAIAGILLKMCW 152
W S M+R DHSMIF+FIAG+YTPF +L L +L++VWGGA+ G++LK+ W
Sbjct 76 W-SERGYQIMRRMDHSMIFMFIAGTYTPFCVLLLDVRQATTMLALVWGGALGGVVLKLVW 134
Query 153 PAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYAVRWPDPW 212
P APR V PLYL LGWV+V ILH+ GVTALVLL +GGA+YS+G ILYA+R P+PW
Sbjct 135 PHAPRWVSAPLYLALGWVSVAMLPQILHSGGVTALVLLALGGAIYSVGAILYALRRPNPW 194
Query 213 PTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
PT FG+HEFFHACT VAAICH+IA++F +F
Sbjct 195 PTVFGHHEFFHACTLVAAICHHIAIYFALF 224
>gi|302864648|ref|YP_003833285.1| channel protein, hemolysin III family [Micromonospora aurantiaca
ATCC 27029]
gi|315500941|ref|YP_004079828.1| channel protein, hemolysin III family [Micromonospora sp. L5]
gi|302567507|gb|ADL43709.1| channel protein, hemolysin III family [Micromonospora aurantiaca
ATCC 27029]
gi|315407560|gb|ADU05677.1| channel protein, hemolysin III family [Micromonospora sp. L5]
Length=225
Score = 219 bits (557), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 114/212 (54%), Positives = 145/212 (69%), Gaps = 5/212 (2%)
Query 33 KPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVSATYHRVN 92
KPR RGW+H Y+ A++ G L +++ ++ L Y+ +F SA YHR
Sbjct 16 KPRMRGWLHAYAFFAALVCGIVLCSIAAGRPGWAPLVSCLIYSFTVCGLFGTSALYHRRV 75
Query 93 WKSATARNW--MKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAIAGILLKM 150
W T R + M+R DHSMIFVFIAG+YTPF L L ++LS+VWGGAIAG+ +K+
Sbjct 76 W---TERGYQIMRRMDHSMIFVFIAGTYTPFCALLLDNRQATIMLSLVWGGAIAGVAVKL 132
Query 151 CWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYAVRWPD 210
WP APR V PLYL LGWVAV ILH+ GVTALVLL VGGA+YS+G + YA+R P+
Sbjct 133 IWPHAPRWVSAPLYLALGWVAVAMLPQILHSGGVTALVLLSVGGAIYSVGAVFYALRRPN 192
Query 211 PWPTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
PWPT FG+HEFFHACT VAAICH+IA++F +F
Sbjct 193 PWPTVFGHHEFFHACTLVAAICHHIAIYFALF 224
>gi|158312688|ref|YP_001505196.1| hemolysin III family channel protein [Frankia sp. EAN1pec]
gi|158108093|gb|ABW10290.1| channel protein, hemolysin III family [Frankia sp. EAN1pec]
Length=273
Score = 219 bits (557), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/209 (53%), Positives = 145/209 (70%), Gaps = 3/209 (1%)
Query 29 RVLTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVSATY 88
R L +PR RGW+H + ++ G VA++ + +A L Y + +F SA Y
Sbjct 62 RDLVRPRMRGWLHTGAFPVSLALGVIAVALATTL---RARLGVAVYAISIAALFGTSALY 118
Query 89 HRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAIAGILL 148
HR W ++ AR+ MKR DHSMIF+FIAG+YTPFAL+A+P H R+VL++VWGGA G+L+
Sbjct 119 HRKMWSTSRARSLMKRLDHSMIFIFIAGTYTPFALIAMPEHTARIVLAVVWGGAALGVLV 178
Query 149 KMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYAVRW 208
+M W +PR + VPLY+ LGWVAV+ ++H AGV A+VLL VGGA YS+G ++YA R
Sbjct 179 RMLWLHSPRFLIVPLYIALGWVAVFVIPELMHQAGVAAMVLLLVGGACYSLGALVYATRR 238
Query 209 PDPWPTTFGYHEFFHACTAVAAICHYIAM 237
PDP P+TFGYHE FHA T VAA CHYIA+
Sbjct 239 PDPAPSTFGYHEVFHAFTLVAAGCHYIAL 267
>gi|300789890|ref|YP_003770181.1| hemolysin III-related protein [Amycolatopsis mediterranei U32]
gi|299799404|gb|ADJ49779.1| hemolysin III-related protein [Amycolatopsis mediterranei U32]
gi|340531560|gb|AEK46765.1| hemolysin III-related protein [Amycolatopsis mediterranei S699]
Length=213
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/210 (56%), Positives = 150/210 (72%), Gaps = 1/210 (0%)
Query 33 KPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVSATYHRVN 92
+PR RG IH ++ A++A A+L+ ++ + S A L T Y + +F VSA YHR
Sbjct 4 RPRLRGHIHFWTFFGALVAAAALITLAASTVSPVAALATSVYGLTVLGLFGVSALYHRRF 63
Query 93 WKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAIAGILLKMCW 152
W S A WMKRADHSMIF+FIAG+YTPF LLA+ G V+LSIVWGGAIAG+ LKM W
Sbjct 64 W-SPRAYKWMKRADHSMIFLFIAGTYTPFTLLAMSKPTGYVILSIVWGGAIAGVALKMLW 122
Query 153 PAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYAVRWPDPW 212
P APR +GVP+Y+ LGWVAV+ + +AGV ALVLL VGG Y++G + YAV+WP+ W
Sbjct 123 PNAPRWLGVPIYIALGWVAVFVFPELASHAGVGALVLLCVGGLFYTLGAVFYAVKWPNHW 182
Query 213 PTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
P TFGYHEFFHACT +AA+ HYIA+W ++
Sbjct 183 PETFGYHEFFHACTVLAAVSHYIAIWLAMY 212
>gi|257057127|ref|YP_003134959.1| channel protein, hemolysin III family [Saccharomonospora viridis
DSM 43017]
gi|256586999|gb|ACU98132.1| channel protein, hemolysin III family [Saccharomonospora viridis
DSM 43017]
Length=229
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/213 (59%), Positives = 153/213 (72%), Gaps = 1/213 (0%)
Query 30 VLTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVSATYH 89
V T+PR RG IH +S AV AGA+L+A++ + S A L T Y + +F VSA YH
Sbjct 17 VDTRPRLRGHIHFWSFFGAVAAGATLIALAASTVSGLAALATSIYGVTVLGVFGVSALYH 76
Query 90 RVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAIAGILLK 149
R W S A WMKRADHSMIF+FIAG+YTPF LLA+ G VVL +VWGGA+AG+ LK
Sbjct 77 RRIW-SPKAYAWMKRADHSMIFLFIAGTYTPFTLLAMSQPTGYVVLGVVWGGAVAGVALK 135
Query 150 MCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYAVRWP 209
M WP APR +GVP+Y+ LGWVA++ + HNAGV ALVLL VGGALY++G + YA RWP
Sbjct 136 MLWPTAPRWLGVPIYIALGWVAIFVLPELAHNAGVAALVLLLVGGALYTVGSVFYATRWP 195
Query 210 DPWPTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
+ WP TFGYHEFFHACT AAI HYIA+W ++
Sbjct 196 NYWPKTFGYHEFFHACTVAAAITHYIAIWLAMY 228
>gi|145222115|ref|YP_001132793.1| hemolysin III family channel protein [Mycobacterium gilvum PYR-GCK]
gi|315442555|ref|YP_004075434.1| channel protein, hemolysin III family [Mycobacterium sp. Spyr1]
gi|145214601|gb|ABP44005.1| channel protein, hemolysin III family [Mycobacterium gilvum PYR-GCK]
gi|315260858|gb|ADT97599.1| channel protein, hemolysin III family [Mycobacterium sp. Spyr1]
Length=200
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 107/183 (59%), Positives = 133/183 (73%), Gaps = 0/183 (0%)
Query 59 SWAVGSAKAGLTTLAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSY 118
+W S +AG Y A + MFTVSATYHRV W S A WM R DHS+IF+FIA SY
Sbjct 17 AWMSPSERAGWAASVYVAGVVAMFTVSATYHRVEWGSPQAEKWMMRLDHSVIFLFIAASY 76
Query 119 TPFALLALPAHDGRVVLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATI 178
TP A+LALP G VL++VW GA+AG+ LKMCWP+APR VG+PLYL+LG+VA+W+ +
Sbjct 77 TPLAVLALPPGVGAEVLTMVWAGALAGVALKMCWPSAPRWVGIPLYLMLGYVAIWFADAL 136
Query 179 LHNAGVTALVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMW 238
LH AG T + LL GG LY++G ILY V+WP+PWP TFG+HEFFHA T AA CH+ A+W
Sbjct 137 LHGAGATVVALLIAGGVLYNLGAILYGVQWPNPWPATFGHHEFFHAFTVAAAACHFAAIW 196
Query 239 FVV 241
+V
Sbjct 197 LIV 199
>gi|326381833|ref|ZP_08203526.1| channel protein, hemolysin III family [Gordonia neofelifaecis
NRRL B-59395]
gi|326199259|gb|EGD56440.1| channel protein, hemolysin III family [Gordonia neofelifaecis
NRRL B-59395]
Length=228
Score = 214 bits (545), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 111/211 (53%), Positives = 147/211 (70%), Gaps = 2/211 (0%)
Query 33 KPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATIT-MFTVSATYHRV 91
+P RG IH YS+ A G L+ V A+ + + ++ TI +FT S YHR+
Sbjct 18 RPALRGVIHKYSSFIAGAVGIVLI-VGTAMHQSAVAVASVVVYVITICGLFTTSTVYHRI 76
Query 92 NWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGAIAGILLKMC 151
NW+S AR MKRADHSMIFVFIAG+Y+PF ++ L + VL +VW GAIAG+ LK+
Sbjct 77 NWRSPKARIAMKRADHSMIFVFIAGTYSPFCVMGLDSPTRWWVLGLVWAGAIAGVALKVI 136
Query 152 WPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYAVRWPDP 211
WP +PR +GV LY++LGWV VW + ++HN GV +VLL +GG LYS+GG+LYA+RWP+P
Sbjct 137 WPGSPRWLGVVLYIVLGWVIVWVSPMLVHNTGVAVIVLLALGGVLYSVGGVLYALRWPEP 196
Query 212 WPTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
WP FG+HE FH+CTAVAA+ HYIA+W VV
Sbjct 197 WPGVFGHHEVFHSCTAVAALLHYIAVWLVVI 227
>gi|331694814|ref|YP_004331053.1| channel protein, hemolysin III family [Pseudonocardia dioxanivorans
CB1190]
gi|326949503|gb|AEA23200.1| channel protein, hemolysin III family [Pseudonocardia dioxanivorans
CB1190]
Length=227
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/220 (55%), Positives = 154/220 (70%), Gaps = 0/220 (0%)
Query 23 LVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMF 82
L + AR L KPR RGW+H++S ++LA A L++V+ A A A + T Y+ + +F
Sbjct 6 LAQPPARPLVKPRMRGWLHLWSFAVSILAAAVLISVAAASVGAAAAVATAVYSVTILGLF 65
Query 83 TVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGGA 142
VSA YHR W + +R MKR DHSMIF+FIAG+YTP ++LA+ A R VL VWGGA
Sbjct 66 GVSALYHRRTWTTTRSRMIMKRLDHSMIFLFIAGTYTPVSVLAMDAATARWVLFTVWGGA 125
Query 143 IAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGI 202
+AG++LKM WPAAP + VP+Y+ LGWVAV+ +LHN GV A VLL GG LY+IG I
Sbjct 126 LAGVVLKMAWPAAPSWLAVPVYVALGWVAVFVFPQMLHNGGVAAFVLLIAGGVLYTIGAI 185
Query 203 LYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
YA + P+PWP TFGYHEFFHA T +AA CHY+A+W V+F
Sbjct 186 FYATKRPNPWPATFGYHEFFHAATVLAAACHYVAIWLVLF 225
>gi|86742577|ref|YP_482977.1| hemolysin III family channel protein [Frankia sp. CcI3]
gi|86569439|gb|ABD13248.1| channel protein, hemolysin III family [Frankia sp. CcI3]
Length=305
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/229 (49%), Positives = 148/229 (65%), Gaps = 3/229 (1%)
Query 14 RTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLA 73
+ PA + R L +PR RGW+H + ++ G ++AV+ A + +A L
Sbjct 80 QQPAGPPQTDIASHPRDLVRPRMRGWLHAGAFPISLTLG--VIAVALAT-TLRARLGVAV 136
Query 74 YTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRV 133
Y + +F SA YHR W ++ AR MKR DHSMIFVFIAG+YTPFAL+A+P RV
Sbjct 137 YALSIAALFGTSALYHRTMWSTSRARARMKRLDHSMIFVFIAGTYTPFALIAMPPTTARV 196
Query 134 VLSIVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVG 193
VL++VWGGA G+ ++M W +PR + VPLY+ LGWVAV+ + H AG+ ++VLL VG
Sbjct 197 VLAVVWGGAGLGVAIRMLWLHSPRYLTVPLYIALGWVAVFVIPELAHRAGIASMVLLLVG 256
Query 194 GALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIAMWFVVF 242
G YS+G ++YA R PDP PT FGYHE FHA T VAA CHYIA+ F ++
Sbjct 257 GVCYSLGAVVYACRRPDPAPTIFGYHEVFHAFTLVAATCHYIALLFAIY 305
Lambda K H
0.327 0.135 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 333756066840
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40