BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1086
Length=262
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608226|ref|NP_215602.1| short (C15) chain Z-isoprenyl dipho... 530 9e-149
gi|254363994|ref|ZP_04980040.1| short chain (C15) Z-isoprenyl di... 528 3e-148
gi|31792277|ref|NP_854770.1| short (C15) chain Z-isoprenyl dipho... 528 4e-148
gi|289744826|ref|ZP_06504204.1| short-chain (C15) Z-isoprenyl di... 526 9e-148
gi|340626098|ref|YP_004744550.1| short (C15) chain Z-isoprenyl d... 524 5e-147
gi|289757172|ref|ZP_06516550.1| short chain Z-Isoprenyl diphosph... 497 6e-139
gi|240170280|ref|ZP_04748939.1| short (C15) chain Z-isoprenyl di... 496 2e-138
gi|118616083|ref|YP_904415.1| short (C15) chain Z-isoprenyl diph... 492 2e-137
gi|183984351|ref|YP_001852642.1| short (C15) chain Z-isoprenyl d... 491 4e-137
gi|254550078|ref|ZP_05140525.1| short-chain (C15) Z-isoprenyl di... 489 1e-136
gi|254819722|ref|ZP_05224723.1| short-chain Z-isoprenyl diphosph... 489 2e-136
gi|296169955|ref|ZP_06851562.1| undecaprenyl diphosphate synthas... 488 3e-136
gi|41408801|ref|NP_961637.1| hypothetical protein MAP2703c [Myco... 487 9e-136
gi|254774094|ref|ZP_05215610.1| short-chain Z-isoprenyl diphosph... 485 3e-135
gi|15828335|ref|NP_302598.1| undecaprenyl pyrophosphate syntheta... 481 5e-134
gi|342861678|ref|ZP_08718324.1| short (C15) chain Z-isoprenyl di... 476 1e-132
gi|333989673|ref|YP_004522287.1| short (C15) chain Z-isoprenyl d... 471 5e-131
gi|298524583|ref|ZP_07011992.1| short-chain (C15) Z-isoprenyl di... 467 9e-130
gi|160286204|pdb|2VG1|A Chain A, Rv1086 E,E-Farnesyl Diphosphate... 463 1e-128
gi|160286196|pdb|2VFW|A Chain A, Rv1086 Native >gi|160286197|pdb... 461 3e-128
gi|118468157|ref|YP_889502.1| undecaprenyl diphosphate synthase ... 454 7e-126
gi|120405614|ref|YP_955443.1| undecaprenyl diphosphate synthase ... 452 3e-125
gi|145222643|ref|YP_001133321.1| undecaprenyl diphosphate syntha... 446 1e-123
gi|327187688|dbj|BAK09179.1| Z-prenyltransferase 1 [Mycobacteriu... 444 6e-123
gi|289442513|ref|ZP_06432257.1| undecaprenyl diphosphate synthas... 432 2e-119
gi|169628302|ref|YP_001701951.1| short-chain Z-isoprenyl diphosp... 422 2e-116
gi|126436939|ref|YP_001072630.1| undecaprenyl pyrophosphate synt... 421 6e-116
gi|119870242|ref|YP_940194.1| undecaprenyl pyrophosphate synthet... 421 6e-116
gi|108801101|ref|YP_641298.1| undecaprenyl pyrophosphate synthet... 398 6e-109
gi|289573741|ref|ZP_06453968.1| short chain Z-isoprenyl diphosph... 380 7e-104
gi|296140818|ref|YP_003648061.1| undecaprenyl diphosphate syntha... 362 4e-98
gi|333921070|ref|YP_004494651.1| Undecaprenyl diphosphate syntha... 362 4e-98
gi|54026792|ref|YP_121034.1| putative undecaprenyl pyrophosphate... 342 2e-92
gi|343925095|ref|ZP_08764627.1| undecaprenyl pyrophosphate synth... 342 4e-92
gi|226365327|ref|YP_002783110.1| short-chain Z-isoprenyl diphosp... 342 5e-92
gi|289573742|ref|ZP_06453969.1| short chain Z-isoprenyl diphosph... 340 9e-92
gi|325676569|ref|ZP_08156247.1| undecaprenyl diphosphate synthas... 340 2e-91
gi|111022819|ref|YP_705791.1| di-trans,poly-cis-decaprenylcistra... 339 2e-91
gi|312138738|ref|YP_004006074.1| undecaprenyl diphosphate syntha... 338 3e-91
gi|226307742|ref|YP_002767702.1| short-chain Z-isoprenyl diphosp... 336 2e-90
gi|262201612|ref|YP_003272820.1| undecaprenyl diphosphate syntha... 333 2e-89
gi|167966591|ref|ZP_02548868.1| short-chain (C15) Z-isoprenyl di... 331 8e-89
gi|319950189|ref|ZP_08024116.1| putative undecaprenyl pyrophosph... 330 2e-88
gi|326381834|ref|ZP_08203527.1| undecaprenyl diphosphate synthas... 319 3e-85
gi|296394377|ref|YP_003659261.1| undecaprenyl diphosphate syntha... 317 1e-84
gi|317508404|ref|ZP_07966074.1| di-trans,poly-cis-decaprenylcist... 315 5e-84
gi|300858143|ref|YP_003783126.1| hypothetical protein cpfrc_0072... 312 2e-83
gi|305681959|ref|ZP_07404763.1| di-trans,poly-cis-decaprenylcist... 310 2e-82
gi|337290395|ref|YP_004629416.1| hypothetical protein CULC22_007... 309 3e-82
gi|225022973|ref|ZP_03712165.1| hypothetical protein CORMATOL_03... 308 4e-82
>gi|15608226|ref|NP_215602.1| short (C15) chain Z-isoprenyl diphosphate synthase (Z-FPP synthase)
(Z-farnesyl diphosphate synthase) (Z-FPP synthetase)
(Z-farnesyl diphosphate synthetase) (geranyltranstransferase)
(farnesyl pyrophosphate synthetase) [Mycobacterium tuberculosis
H37Rv]
gi|15840523|ref|NP_335560.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
CDC1551]
gi|148660871|ref|YP_001282394.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
H37Ra]
43 more sequence titles
Length=262
Score = 530 bits (1365), Expect = 9e-149, Method: Compositional matrix adjust.
Identities = 261/262 (99%), Positives = 262/262 (100%), Gaps = 0/262 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
+EIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM
Sbjct 1 MEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV
Sbjct 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
Query 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA
Sbjct 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
Query 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA
Sbjct 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
Query 241 FRHVDFLRALRDYSARHRSYGR 262
FRHVDFLRALRDYSARHRSYGR
Sbjct 241 FRHVDFLRALRDYSARHRSYGR 262
>gi|254363994|ref|ZP_04980040.1| short chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis str. Haarlem]
gi|134149508|gb|EBA41553.1| short chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis str. Haarlem]
Length=262
Score = 528 bits (1360), Expect = 3e-148, Method: Compositional matrix adjust.
Identities = 260/262 (99%), Positives = 261/262 (99%), Gaps = 0/262 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
+EIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM
Sbjct 1 MEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV
Sbjct 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
Query 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA
Sbjct 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
Query 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
TAEELVDAVTVEGISENLYTSGQPDPD VIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA
Sbjct 181 TAEELVDAVTVEGISENLYTSGQPDPDSVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
Query 241 FRHVDFLRALRDYSARHRSYGR 262
FRHVDFLRALRDYSARHRSYGR
Sbjct 241 FRHVDFLRALRDYSARHRSYGR 262
>gi|31792277|ref|NP_854770.1| short (C15) chain Z-isoprenyl diphosphate synthase (Z-FPP synthase)
(Z-farnesyl diphosphate synthase) (Z-FPP synthetase)
(Z-farnesyl diphosphate synthetase) (geranyltranstransferase)
(farnesyl pyrophosphate synthetase) [Mycobacterium bovis AF2122/97]
gi|121637015|ref|YP_977238.1| Short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|224989488|ref|YP_002644175.1| short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
bovis BCG str. Tokyo 172]
23 more sequence titles
Length=262
Score = 528 bits (1359), Expect = 4e-148, Method: Compositional matrix adjust.
Identities = 260/262 (99%), Positives = 261/262 (99%), Gaps = 0/262 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
+EIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM
Sbjct 1 MEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV
Sbjct 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
Query 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA
Sbjct 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
Query 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA
Sbjct 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
Query 241 FRHVDFLRALRDYSARHRSYGR 262
FRHVDFLRALRDYSARHR YGR
Sbjct 241 FRHVDFLRALRDYSARHRRYGR 262
>gi|289744826|ref|ZP_06504204.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 02_1987]
gi|289685354|gb|EFD52842.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 02_1987]
Length=262
Score = 526 bits (1356), Expect = 9e-148, Method: Compositional matrix adjust.
Identities = 259/262 (99%), Positives = 261/262 (99%), Gaps = 0/262 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
+EIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM
Sbjct 1 MEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GAAKIAEMLRWCHEAGI+LATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV
Sbjct 61 GAAKIAEMLRWCHEAGIDLATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
Query 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA
Sbjct 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
Query 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA
Sbjct 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
Query 241 FRHVDFLRALRDYSARHRSYGR 262
FRHVDFLRALRDYSARHR YGR
Sbjct 241 FRHVDFLRALRDYSARHRRYGR 262
>gi|340626098|ref|YP_004744550.1| short (C15) chain Z-isoprenyl diphosphate [Mycobacterium canettii
CIPT 140010059]
gi|340004288|emb|CCC43429.1| short (C15) chain Z-isoprenyl diphosphate synthase (Z-FPP synthase)
(Z-farnesyl diphosphate synthase) (Z-FPP synthetase)
(Z-farnesyl diphosphate synthetase) (geranyltranstransferase)
(farnesyl pyrophosphate synthetase) [Mycobacterium canettii
CIPT 140010059]
Length=262
Score = 524 bits (1350), Expect = 5e-147, Method: Compositional matrix adjust.
Identities = 258/262 (99%), Positives = 259/262 (99%), Gaps = 0/262 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
+EIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM
Sbjct 1 MEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GAAKIAEMLRWC EAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAP NHWSV
Sbjct 61 GAAKIAEMLRWCQEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPTNHWSV 120
Query 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA
Sbjct 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
Query 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA
Sbjct 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
Query 241 FRHVDFLRALRDYSARHRSYGR 262
FRHVDFLRALRDYSARHR YGR
Sbjct 241 FRHVDFLRALRDYSARHRRYGR 262
>gi|289757172|ref|ZP_06516550.1| short chain Z-Isoprenyl diphosphate synthase [Mycobacterium tuberculosis
T85]
gi|289712736|gb|EFD76748.1| short chain Z-Isoprenyl diphosphate synthase [Mycobacterium tuberculosis
T85]
Length=263
Score = 497 bits (1280), Expect = 6e-139, Method: Compositional matrix adjust.
Identities = 249/263 (95%), Positives = 251/263 (96%), Gaps = 1/263 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYR- 59
+EIIPPRLKEPLYRLYELRLRQGL ASKSDLPRHIAVLCDGNRRW R A Y V YGYR
Sbjct 1 MEIIPPRLKEPLYRLYELRLRQGLPASKSDLPRHIAVLCDGNRRWERRAAYHYVGYGYRD 60
Query 60 MGAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWS 119
+ KIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWS
Sbjct 61 VVRPKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWS 120
Query 120 VRTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANG 179
VRTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANG
Sbjct 121 VRTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANG 180
Query 180 ATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWP 239
ATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWP
Sbjct 181 ATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWP 240
Query 240 AFRHVDFLRALRDYSARHRSYGR 262
AFRHVDFLRALRDYSARHR YGR
Sbjct 241 AFRHVDFLRALRDYSARHRRYGR 263
>gi|240170280|ref|ZP_04748939.1| short (C15) chain Z-isoprenyl diphosphate synthase, UppS [Mycobacterium
kansasii ATCC 12478]
Length=262
Score = 496 bits (1276), Expect = 2e-138, Method: Compositional matrix adjust.
Identities = 240/262 (92%), Positives = 252/262 (97%), Gaps = 0/262 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
+EIIPPRLKEPLYR+YELRLRQGLAA++S+LPRHIAVLCDGNRRWARSAGY+DVSYGYRM
Sbjct 1 MEIIPPRLKEPLYRIYELRLRQGLAATRSELPRHIAVLCDGNRRWARSAGYEDVSYGYRM 60
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GAAKIAEMLRWC +AGIE+ TVYLLSTENLQRDPDELA LIEIITDVVEEICAPAN WSV
Sbjct 61 GAAKIAEMLRWCQDAGIEMTTVYLLSTENLQRDPDELAGLIEIITDVVEEICAPANRWSV 120
Query 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
RTVGDLGLIGEEPARR+R AVESTPE ASFHVNVAVGYGGRREIVDAVRALLSKELANGA
Sbjct 121 RTVGDLGLIGEEPARRVRDAVESTPETASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
Query 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
+AEELVDAVT +GISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA
Sbjct 181 SAEELVDAVTEDGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
Query 241 FRHVDFLRALRDYSARHRSYGR 262
FR VDFLRALRDYS RHR YG+
Sbjct 241 FRRVDFLRALRDYSQRHRRYGK 262
>gi|118616083|ref|YP_904415.1| short (C15) chain Z-isoprenyl diphosphate synthase, UppS [Mycobacterium
ulcerans Agy99]
gi|118568193|gb|ABL02944.1| short (C15) chain Z-isoprenyl diphosphate synthase, UppS [Mycobacterium
ulcerans Agy99]
Length=271
Score = 492 bits (1267), Expect = 2e-137, Method: Compositional matrix adjust.
Identities = 240/262 (92%), Positives = 248/262 (95%), Gaps = 0/262 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
VEIIPPRLKEPLYRLYELRLRQGLAA+ S+LPRHIAVLCDGNRRWAR AGYDDVSYGYRM
Sbjct 10 VEIIPPRLKEPLYRLYELRLRQGLAATSSELPRHIAVLCDGNRRWARDAGYDDVSYGYRM 69
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GAAKIAEMLRWC EAGIE+ TVYLLSTENLQRD DELAALIEIITDVVEEICAPAN WSV
Sbjct 70 GAAKIAEMLRWCQEAGIEMTTVYLLSTENLQRDADELAALIEIITDVVEEICAPANRWSV 129
Query 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
RTVGDL L+G+EPARRLR AVESTP A FHVNVAVGYGGRREIVDAVRALLSKELANGA
Sbjct 130 RTVGDLELLGDEPARRLREAVESTPATAQFHVNVAVGYGGRREIVDAVRALLSKELANGA 189
Query 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
TAEEL+DAV+VEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA
Sbjct 190 TAEELIDAVSVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 249
Query 241 FRHVDFLRALRDYSARHRSYGR 262
FR VDFLRALRDYS RHR YG+
Sbjct 250 FRRVDFLRALRDYSMRHRRYGK 271
>gi|183984351|ref|YP_001852642.1| short (C15) chain Z-isoprenyl diphosphate synthase, UppS [Mycobacterium
marinum M]
gi|183177677|gb|ACC42787.1| short (C15) chain Z-isoprenyl diphosphate synthase, UppS [Mycobacterium
marinum M]
Length=262
Score = 491 bits (1264), Expect = 4e-137, Method: Compositional matrix adjust.
Identities = 239/262 (92%), Positives = 248/262 (95%), Gaps = 0/262 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
+EIIPPRLKEPLYRLYELRLRQGLAA+ S+LPRHIAVLCDGNRRWAR AGYDDVSYGYRM
Sbjct 1 MEIIPPRLKEPLYRLYELRLRQGLAATSSELPRHIAVLCDGNRRWARDAGYDDVSYGYRM 60
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GAAKIAEMLRWC EAGIE+ TVYLLSTENLQRD DELAALIEIITDVVEEICAPAN WSV
Sbjct 61 GAAKIAEMLRWCQEAGIEMTTVYLLSTENLQRDADELAALIEIITDVVEEICAPANRWSV 120
Query 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
RTVGDL L+G+EPARRLR AVESTP A FHVNVAVGYGGRREIVDAVRALLSKELANGA
Sbjct 121 RTVGDLELLGDEPARRLREAVESTPATAQFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
Query 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
TAEEL+DAV+VEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA
Sbjct 181 TAEELIDAVSVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
Query 241 FRHVDFLRALRDYSARHRSYGR 262
FR VDFLRALRDYS RHR YG+
Sbjct 241 FRRVDFLRALRDYSMRHRRYGK 262
>gi|254550078|ref|ZP_05140525.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
Length=242
Score = 489 bits (1260), Expect = 1e-136, Method: Compositional matrix adjust.
Identities = 241/242 (99%), Positives = 242/242 (100%), Gaps = 0/242 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
+EIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM
Sbjct 1 MEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV
Sbjct 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
Query 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA
Sbjct 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
Query 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA
Sbjct 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
Query 241 FR 242
FR
Sbjct 241 FR 242
>gi|254819722|ref|ZP_05224723.1| short-chain Z-isoprenyl diphosphate synthetase [Mycobacterium
intracellulare ATCC 13950]
Length=264
Score = 489 bits (1259), Expect = 2e-136, Method: Compositional matrix adjust.
Identities = 237/262 (91%), Positives = 247/262 (95%), Gaps = 0/262 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
VEIIP RLKEPLYR+YE+RLRQGL ASKS+LPRHIAVLCDGNRRWAR AGYDDVSYGYRM
Sbjct 3 VEIIPRRLKEPLYRIYEMRLRQGLTASKSELPRHIAVLCDGNRRWARDAGYDDVSYGYRM 62
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GAAKIAEMLRWC EAGIE+ TVYLLSTENLQRDPDELA LIEIITDVVEEICAPAN WSV
Sbjct 63 GAAKIAEMLRWCQEAGIEMTTVYLLSTENLQRDPDELAGLIEIITDVVEEICAPANRWSV 122
Query 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
RTVGDL L+GE+PARRLRGAVESTP VA FHVNVAVGYGGRREIVDAVR+LLSKELANGA
Sbjct 123 RTVGDLELLGEQPARRLRGAVESTPVVAPFHVNVAVGYGGRREIVDAVRSLLSKELANGA 182
Query 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
TAEEL+D VTV+ ISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA
Sbjct 183 TAEELIDTVTVDAISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 242
Query 241 FRHVDFLRALRDYSARHRSYGR 262
FR VDFLRALRDYS RHR YG+
Sbjct 243 FRRVDFLRALRDYSQRHRRYGK 264
>gi|296169955|ref|ZP_06851562.1| undecaprenyl diphosphate synthase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895359|gb|EFG75065.1| undecaprenyl diphosphate synthase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=262
Score = 488 bits (1257), Expect = 3e-136, Method: Compositional matrix adjust.
Identities = 239/262 (92%), Positives = 248/262 (95%), Gaps = 0/262 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
+EIIPPRLKEPLYR+YELRLRQ LAASKS LPRHIAVLCDGNRRWAR AGY DVSYGYRM
Sbjct 1 MEIIPPRLKEPLYRVYELRLRQELAASKSHLPRHIAVLCDGNRRWARDAGYTDVSYGYRM 60
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GAAKIAEMLRWC EAGIE+ TVYLLSTENLQRDPDELA LIEIITDVVEEICAPAN WSV
Sbjct 61 GAAKIAEMLRWCQEAGIEMTTVYLLSTENLQRDPDELAGLIEIITDVVEEICAPANRWSV 120
Query 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
RTVGDL L+GEEPARRLRGAVESTP VA FHVNVAVGYGGRREIVDAVRALLSKELANGA
Sbjct 121 RTVGDLELLGEEPARRLRGAVESTPVVAPFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
Query 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
+AEEL++AVTV+GISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA
Sbjct 181 SAEELIEAVTVDGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
Query 241 FRHVDFLRALRDYSARHRSYGR 262
FR VDFLRALRDYS RHR YG+
Sbjct 241 FRRVDFLRALRDYSQRHRRYGK 262
>gi|41408801|ref|NP_961637.1| hypothetical protein MAP2703c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118463939|ref|YP_880457.1| short chain Z-isoprenyl diphosphate synthetase [Mycobacterium
avium 104]
gi|41397160|gb|AAS05020.1| hypothetical protein MAP_2703c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118165226|gb|ABK66123.1| short-chain Z-isoprenyl diphosphate synthetase [Mycobacterium
avium 104]
gi|336458706|gb|EGO37666.1| undecaprenyl diphosphate synthase [Mycobacterium avium subsp.
paratuberculosis S397]
Length=264
Score = 487 bits (1253), Expect = 9e-136, Method: Compositional matrix adjust.
Identities = 236/262 (91%), Positives = 246/262 (94%), Gaps = 0/262 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
VEIIPPRLKEPLYR+YE+RLRQ L A+K+DLPRHIAVLCDGNRRWAR AGYDDVSYGYRM
Sbjct 3 VEIIPPRLKEPLYRIYEMRLRQELGAAKADLPRHIAVLCDGNRRWARDAGYDDVSYGYRM 62
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GA KIAEMLRWC AGIE+ TVYLLSTENLQRDPDELA LIEIITDVVEEICAPAN WSV
Sbjct 63 GAVKIAEMLRWCQAAGIEMTTVYLLSTENLQRDPDELAGLIEIITDVVEEICAPANRWSV 122
Query 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
RTVGDL L+GEEPARRLRGAVESTP ASFHVNVAVGYGGRREIVDAVR+LLSKELANGA
Sbjct 123 RTVGDLELLGEEPARRLRGAVESTPVEASFHVNVAVGYGGRREIVDAVRSLLSKELANGA 182
Query 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
TAEEL+DAVTV+ ISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA
Sbjct 183 TAEELIDAVTVDAISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 242
Query 241 FRHVDFLRALRDYSARHRSYGR 262
FR VDFLRALRDYS RHR YG+
Sbjct 243 FRRVDFLRALRDYSQRHRRYGK 264
>gi|254774094|ref|ZP_05215610.1| short-chain Z-isoprenyl diphosphate synthetase [Mycobacterium
avium subsp. avium ATCC 25291]
Length=264
Score = 485 bits (1248), Expect = 3e-135, Method: Compositional matrix adjust.
Identities = 235/262 (90%), Positives = 246/262 (94%), Gaps = 0/262 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
VEIIPPRLKEPLYR+YE+RLRQ L A+K+DLPRHIAVLCDGNRRWAR AGYDDVSYGYRM
Sbjct 3 VEIIPPRLKEPLYRIYEMRLRQELGAAKADLPRHIAVLCDGNRRWARDAGYDDVSYGYRM 62
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GA KIAEMLRWC AGIE+ TVYLLSTENLQRDPDELA LIEIITDVVEEICAPAN WSV
Sbjct 63 GAVKIAEMLRWCQAAGIEMTTVYLLSTENLQRDPDELAGLIEIITDVVEEICAPANRWSV 122
Query 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
RTVGDL L+GEEPARRLRGAVESTP ASFHVNVAVGYGGRREIVDAVR+LLSKELANGA
Sbjct 123 RTVGDLELLGEEPARRLRGAVESTPVEASFHVNVAVGYGGRREIVDAVRSLLSKELANGA 182
Query 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
TAEEL++AVTV+ ISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA
Sbjct 183 TAEELIEAVTVDAISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 242
Query 241 FRHVDFLRALRDYSARHRSYGR 262
FR VDFLRALRDYS RHR YG+
Sbjct 243 FRRVDFLRALRDYSQRHRRYGK 264
>gi|15828335|ref|NP_302598.1| undecaprenyl pyrophosphate synthetase [Mycobacterium leprae TN]
gi|221230812|ref|YP_002504228.1| putative undecaprenyl pyrophosphate synthetase [Mycobacterium
leprae Br4923]
gi|44888532|sp|Q9CB36.1|ZFPP_MYCLE RecName: Full=Short-chain Z-isoprenyl diphosphate synthase; AltName:
Full=(2Z,6E)-farnesyl diphosphate synthase; AltName:
Full=Z-FPP synthase; AltName: Full=Z-isoprenyl diphosphate
synthase
gi|13094028|emb|CAC31984.1| possible undecaprenyl pyrophosphate synthetase [Mycobacterium
leprae]
gi|219933919|emb|CAR72566.1| possible undecaprenyl pyrophosphate synthetase [Mycobacterium
leprae Br4923]
Length=262
Score = 481 bits (1238), Expect = 5e-134, Method: Compositional matrix adjust.
Identities = 237/262 (91%), Positives = 244/262 (94%), Gaps = 0/262 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
+EIIPPRLKEPLY LYELRLRQGL AS+S LPRHIAVLCDGNRRWAR AGYDDVSYGYRM
Sbjct 1 MEIIPPRLKEPLYALYELRLRQGLTASESRLPRHIAVLCDGNRRWARDAGYDDVSYGYRM 60
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GAAKIAEMLRWC EAGIE+ TVYLLSTENLQRDPDELAALIEIITDVVEEICAPAN WSV
Sbjct 61 GAAKIAEMLRWCQEAGIEMTTVYLLSTENLQRDPDELAALIEIITDVVEEICAPANRWSV 120
Query 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
RTVGDL L+GEEPA RLRGAVESTP VA FHVNVAVGYGGRREIV AVRALL KELANGA
Sbjct 121 RTVGDLELLGEEPACRLRGAVESTPGVAPFHVNVAVGYGGRREIVGAVRALLGKELANGA 180
Query 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
TAEELV+AVTVEGI+ NLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTE HWPA
Sbjct 181 TAEELVEAVTVEGIARNLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTETHWPA 240
Query 241 FRHVDFLRALRDYSARHRSYGR 262
FR VDFLRALRDYS RHR YG+
Sbjct 241 FRRVDFLRALRDYSMRHRRYGK 262
>gi|342861678|ref|ZP_08718324.1| short (C15) chain Z-isoprenyl diphosphate synthase, UppS [Mycobacterium
colombiense CECT 3035]
gi|342130812|gb|EGT84108.1| short (C15) chain Z-isoprenyl diphosphate synthase, UppS [Mycobacterium
colombiense CECT 3035]
Length=264
Score = 476 bits (1225), Expect = 1e-132, Method: Compositional matrix adjust.
Identities = 232/262 (89%), Positives = 244/262 (94%), Gaps = 0/262 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
VEIIPPRLKEPLYR+YELRLRQGLAASKS LPRHIAVLCDGNRRWAR AGY+DVSYGYRM
Sbjct 3 VEIIPPRLKEPLYRVYELRLRQGLAASKSQLPRHIAVLCDGNRRWARDAGYEDVSYGYRM 62
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GA+KIAEMLRWC EAG+E+ TVYLLSTENLQRDPDELA LIEIITDVVEEICAPAN WSV
Sbjct 63 GASKIAEMLRWCQEAGVEMTTVYLLSTENLQRDPDELAGLIEIITDVVEEICAPANRWSV 122
Query 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
RTVGDL L+G+EPARRLR AVESTP VA FHVNVAVGYGGR+EIV AVRALL+KELANGA
Sbjct 123 RTVGDLELLGDEPARRLRDAVESTPSVAPFHVNVAVGYGGRQEIVGAVRALLNKELANGA 182
Query 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
TAEELVDAVTV+ ISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWF E HWPA
Sbjct 183 TAEELVDAVTVDAISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFCETHWPA 242
Query 241 FRHVDFLRALRDYSARHRSYGR 262
FR VDFLRALRDYS R R +G+
Sbjct 243 FRRVDFLRALRDYSRRDRRHGK 264
>gi|333989673|ref|YP_004522287.1| short (C15) chain Z-isoprenyl diphosphate synthase UppS [Mycobacterium
sp. JDM601]
gi|333485641|gb|AEF35033.1| short (C15) chain Z-isoprenyl diphosphate synthase UppS [Mycobacterium
sp. JDM601]
Length=263
Score = 471 bits (1212), Expect = 5e-131, Method: Compositional matrix adjust.
Identities = 234/261 (90%), Positives = 243/261 (94%), Gaps = 1/261 (0%)
Query 3 IIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGA 62
IIP RLKEPLYR+YELRLRQGLAAS+S LPRHIAVLCDGNRRWAR AGY+DVSYGYRMGA
Sbjct 3 IIPARLKEPLYRIYELRLRQGLAASRSALPRHIAVLCDGNRRWARDAGYEDVSYGYRMGA 62
Query 63 AKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVRT 122
AKIAEMLRWC +AGIE+ATVYLLSTENLQRDP ELAALIEIITDVVEEICAPAN WSVRT
Sbjct 63 AKIAEMLRWCADAGIEMATVYLLSTENLQRDPAELAALIEIITDVVEEICAPANRWSVRT 122
Query 123 VGDLGLIGEEPARRLRGAVESTPEV-ASFHVNVAVGYGGRREIVDAVRALLSKELANGAT 181
VGDL L+GEEPARRLR AV+ST E FHVNVAVGYGGR+EIVDAVR LL KELANGAT
Sbjct 123 VGDLELLGEEPARRLREAVDSTREKNGGFHVNVAVGYGGRQEIVDAVRGLLGKELANGAT 182
Query 182 AEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAF 241
AEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAF
Sbjct 183 AEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAF 242
Query 242 RHVDFLRALRDYSARHRSYGR 262
R VDFLRALRDYS RHR +GR
Sbjct 243 RRVDFLRALRDYSVRHRRFGR 263
>gi|298524583|ref|ZP_07011992.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 94_M4241A]
gi|298494377|gb|EFI29671.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 94_M4241A]
Length=262
Score = 467 bits (1201), Expect = 9e-130, Method: Compositional matrix adjust.
Identities = 229/230 (99%), Positives = 229/230 (99%), Gaps = 0/230 (0%)
Query 33 RHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQR 92
RHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQR
Sbjct 33 RHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQR 92
Query 93 DPDELAALIEIITDVVEEICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVASFHV 152
DPDELAALIEIITDVVEEICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVASFHV
Sbjct 93 DPDELAALIEIITDVVEEICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVASFHV 152
Query 153 NVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLVIRT 212
NVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLVIRT
Sbjct 153 NVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLVIRT 212
Query 213 SGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRSYGR 262
SGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHR YGR
Sbjct 213 SGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRRYGR 262
>gi|160286204|pdb|2VG1|A Chain A, Rv1086 E,E-Farnesyl Diphosphate Complex
gi|160286205|pdb|2VG1|B Chain B, Rv1086 E,E-Farnesyl Diphosphate Complex
Length=228
Score = 463 bits (1192), Expect = 1e-128, Method: Compositional matrix adjust.
Identities = 228/228 (100%), Positives = 228/228 (100%), Gaps = 0/228 (0%)
Query 29 SDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTE 88
SDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTE
Sbjct 1 SDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTE 60
Query 89 NLQRDPDELAALIEIITDVVEEICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVA 148
NLQRDPDELAALIEIITDVVEEICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVA
Sbjct 61 NLQRDPDELAALIEIITDVVEEICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVA 120
Query 149 SFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDL 208
SFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDL
Sbjct 121 SFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDL 180
Query 209 VIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSAR 256
VIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSAR
Sbjct 181 VIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSAR 228
>gi|160286196|pdb|2VFW|A Chain A, Rv1086 Native
gi|160286197|pdb|2VFW|B Chain B, Rv1086 Native
gi|160286201|pdb|2VG0|A Chain A, Rv1086 Citronelly Pyrophosphate Complex
gi|160286202|pdb|2VG0|B Chain B, Rv1086 Citronelly Pyrophosphate Complex
Length=227
Score = 461 bits (1187), Expect = 3e-128, Method: Compositional matrix adjust.
Identities = 227/227 (100%), Positives = 227/227 (100%), Gaps = 0/227 (0%)
Query 30 DLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTEN 89
DLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTEN
Sbjct 1 DLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTEN 60
Query 90 LQRDPDELAALIEIITDVVEEICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVAS 149
LQRDPDELAALIEIITDVVEEICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVAS
Sbjct 61 LQRDPDELAALIEIITDVVEEICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVAS 120
Query 150 FHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLV 209
FHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLV
Sbjct 121 FHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLV 180
Query 210 IRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSAR 256
IRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSAR
Sbjct 181 IRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSAR 227
>gi|118468157|ref|YP_889502.1| undecaprenyl diphosphate synthase [Mycobacterium smegmatis str.
MC2 155]
gi|118169444|gb|ABK70340.1| undecaprenyl diphosphate synthase [Mycobacterium smegmatis str.
MC2 155]
Length=263
Score = 454 bits (1167), Expect = 7e-126, Method: Compositional matrix adjust.
Identities = 220/263 (84%), Positives = 241/263 (92%), Gaps = 1/263 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
++IIPPRLKEP YR+YE+RLR L SK+ LPRHIAVLCDGNRRWAR AGYDDVS GYR
Sbjct 1 MDIIPPRLKEPAYRIYEMRLRHELVRSKAQLPRHIAVLCDGNRRWARDAGYDDVSIGYRK 60
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GAAKIAEMLRWC AGIE+AT+YLLSTENLQRDPDEL ALIEIITDVVEEICAP N WSV
Sbjct 61 GAAKIAEMLRWCQAAGIEMATIYLLSTENLQRDPDELTALIEIITDVVEEICAPYNKWSV 120
Query 121 RTVGDLGLIGEEPARRLRGAVES-TPEVASFHVNVAVGYGGRREIVDAVRALLSKELANG 179
RTVGDL L+G+EPARRLR AVES T + A+FHVNVAV YGGR+EIVDAVR+LLSKELANG
Sbjct 121 RTVGDLELLGDEPARRLREAVESTTTKGANFHVNVAVAYGGRQEIVDAVRSLLSKELANG 180
Query 180 ATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWP 239
ATAE+L++AVTV+GISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEA+WP
Sbjct 181 ATAEQLIEAVTVDGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWP 240
Query 240 AFRHVDFLRALRDYSARHRSYGR 262
AFR VDFLRALRDY+ARHR +G+
Sbjct 241 AFRRVDFLRALRDYTARHRRFGK 263
>gi|120405614|ref|YP_955443.1| undecaprenyl diphosphate synthase [Mycobacterium vanbaalenii
PYR-1]
gi|119958432|gb|ABM15437.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium vanbaalenii
PYR-1]
Length=265
Score = 452 bits (1162), Expect = 3e-125, Method: Compositional matrix adjust.
Identities = 221/263 (85%), Positives = 239/263 (91%), Gaps = 1/263 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
V++IP RLKEP+YRLYELRLRQGL AS+S+LPRHIAVLCDGNRRWAR +G+DDVSYGYR
Sbjct 3 VDLIPRRLKEPMYRLYELRLRQGLTASRSELPRHIAVLCDGNRRWARESGHDDVSYGYRA 62
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GA KIAEMLRWC EAGIE+ATVYLLSTENLQRD +EL+ALIEIIT+VVEEICAPAN WSV
Sbjct 63 GARKIAEMLRWCQEAGIEMATVYLLSTENLQRDTEELSALIEIITEVVEEICAPANQWSV 122
Query 121 RTVGDLGLIGEEPARRLRGAVESTP-EVASFHVNVAVGYGGRREIVDAVRALLSKELANG 179
RTVGDL LIGEE ARRLR AV ST +FHVNVAVGYGGR+EIVDAVRALLSKELANG
Sbjct 123 RTVGDLELIGEESARRLRDAVSSTDGNGGTFHVNVAVGYGGRQEIVDAVRALLSKELANG 182
Query 180 ATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWP 239
T E+L+++VT E ISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEA+WP
Sbjct 183 LTGEQLIESVTAEAISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWP 242
Query 240 AFRHVDFLRALRDYSARHRSYGR 262
FR VDFLRALRDYSARHR YGR
Sbjct 243 EFRRVDFLRALRDYSARHRRYGR 265
>gi|145222643|ref|YP_001133321.1| undecaprenyl diphosphate synthase [Mycobacterium gilvum PYR-GCK]
gi|315443107|ref|YP_004075986.1| undecaprenyl pyrophosphate synthetase [Mycobacterium sp. Spyr1]
gi|145215129|gb|ABP44533.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium gilvum PYR-GCK]
gi|315261410|gb|ADT98151.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium sp. Spyr1]
Length=263
Score = 446 bits (1148), Expect = 1e-123, Method: Compositional matrix adjust.
Identities = 216/263 (83%), Positives = 239/263 (91%), Gaps = 1/263 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
+++IP RLKEP+YRLYE+RLRQGL+ +S+LPRHIAVLCDGNRRWAR G+DDV+YGYR+
Sbjct 1 MDLIPRRLKEPMYRLYEMRLRQGLSVKRSELPRHIAVLCDGNRRWARETGHDDVAYGYRV 60
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GA KIAEMLRWC EAGIE+ATVYLLSTENLQR+P+EL+ LIEIIT+VVEEICAPAN WSV
Sbjct 61 GAGKIAEMLRWCQEAGIEMATVYLLSTENLQREPEELSCLIEIITEVVEEICAPANQWSV 120
Query 121 RTVGDLGLIGEEPARRLRGAVESTP-EVASFHVNVAVGYGGRREIVDAVRALLSKELANG 179
RTVGDL LIGE+ ARRLR AV ST +FHVNVAVGYGGR+EIVDAVRALLSKELANG
Sbjct 121 RTVGDLELIGEDQARRLRDAVSSTDGNGGAFHVNVAVGYGGRQEIVDAVRALLSKELANG 180
Query 180 ATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWP 239
AT ++LV+AVT E ISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEA+WP
Sbjct 181 ATGDQLVEAVTAEAISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWP 240
Query 240 AFRHVDFLRALRDYSARHRSYGR 262
FR VDFLRALRDYSARHR YGR
Sbjct 241 EFRRVDFLRALRDYSARHRRYGR 263
>gi|327187688|dbj|BAK09179.1| Z-prenyltransferase 1 [Mycobacterium chlorophenolicum]
Length=282
Score = 444 bits (1142), Expect = 6e-123, Method: Compositional matrix adjust.
Identities = 219/262 (84%), Positives = 237/262 (91%), Gaps = 1/262 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
V++IP RLKEP YRLYE+RLRQGL+ KS+LPRHIAVLCDGNRRWAR G+DDV+YGYR
Sbjct 20 VDLIPRRLKEPAYRLYEMRLRQGLSRQKSELPRHIAVLCDGNRRWARELGHDDVAYGYRA 79
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GA KIAEMLRWC +AGIE+ATVY LSTENLQRDPDELA+LIEIITDVVEEICAPAN WSV
Sbjct 80 GAHKIAEMLRWCADAGIEMATVYPLSTENLQRDPDELASLIEIITDVVEEICAPANQWSV 139
Query 121 RTVGDLGLIGEEPARRLRGAVESTP-EVASFHVNVAVGYGGRREIVDAVRALLSKELANG 179
RTVGDL LIGEEPARRLR AV+ST +FHVNVAVGYGGR+EIVDAVRALLSKELANG
Sbjct 140 RTVGDLELIGEEPARRLREAVQSTDGNGGAFHVNVAVGYGGRQEIVDAVRALLSKELANG 199
Query 180 ATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWP 239
T ++L++AVT E ISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEA+WP
Sbjct 200 PTGDQLIEAVTAEAISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWP 259
Query 240 AFRHVDFLRALRDYSARHRSYG 261
FR VDFLRALRDYSARHR YG
Sbjct 260 EFRRVDFLRALRDYSARHRRYG 281
>gi|289442513|ref|ZP_06432257.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
T46]
gi|289415432|gb|EFD12672.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
T46]
Length=216
Score = 432 bits (1112), Expect = 2e-119, Method: Compositional matrix adjust.
Identities = 215/216 (99%), Positives = 216/216 (100%), Gaps = 0/216 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
+EIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM
Sbjct 1 MEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV
Sbjct 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
Query 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA
Sbjct 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
Query 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQ 216
TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQ
Sbjct 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQ 216
>gi|169628302|ref|YP_001701951.1| short-chain Z-isoprenyl diphosphate synthetase [Mycobacterium
abscessus ATCC 19977]
gi|169240269|emb|CAM61297.1| Probable short-chain Z-isoprenyl diphosphate synthetase [Mycobacterium
abscessus]
Length=260
Score = 422 bits (1086), Expect = 2e-116, Method: Compositional matrix adjust.
Identities = 202/262 (78%), Positives = 230/262 (88%), Gaps = 2/262 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
+EIIPPRLKEPLY+LYE+RLRQ L K+ PRHIAVLCDGNRRWARSAGY DVS+GYRM
Sbjct 1 MEIIPPRLKEPLYKLYEMRLRQELV--KASKPRHIAVLCDGNRRWARSAGYTDVSHGYRM 58
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GA KI+EML WC +AG+E+ATVYLLS ENL RDPD+L L+EIITDVVEE+CAP N WSV
Sbjct 59 GARKISEMLGWCQDAGVEMATVYLLSAENLTRDPDQLTELLEIITDVVEELCAPQNKWSV 118
Query 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
R+VGDL L+ +E A R+R AV+S P A FHVNVAVGYGGR+EI DAVR LL+KELANGA
Sbjct 119 RSVGDLDLLPDEVAERMRQAVKSAPSDAGFHVNVAVGYGGRQEITDAVRTLLNKELANGA 178
Query 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
+AE+LV AVTV+ ISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFT+A+WP
Sbjct 179 SAEQLVQAVTVDAISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTDAYWPE 238
Query 241 FRHVDFLRALRDYSARHRSYGR 262
FR VDFLRALRDY+AR+R +G+
Sbjct 239 FRRVDFLRALRDYAARNRRFGQ 260
>gi|126436939|ref|YP_001072630.1| undecaprenyl pyrophosphate synthetase [Mycobacterium sp. JLS]
gi|126236739|gb|ABO00140.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium sp. JLS]
Length=263
Score = 421 bits (1082), Expect = 6e-116, Method: Compositional matrix adjust.
Identities = 209/251 (84%), Positives = 224/251 (90%), Gaps = 1/251 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
++IIP LKEP YRLYE+RLRQ L SKS LPRHIAVLCDGNRRWAR AG+DDVSYGYR+
Sbjct 1 MDIIPRGLKEPAYRLYEMRLRQELMRSKSQLPRHIAVLCDGNRRWARDAGHDDVSYGYRV 60
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GAAKIAEMLRWC AGIE+ATVYLLSTENLQRD DELA LIEIIT VVEEICAPAN WSV
Sbjct 61 GAAKIAEMLRWCQAAGIEMATVYLLSTENLQRDADELAELIEIITGVVEEICAPANRWSV 120
Query 121 RTVGDLGLIGEEPARRLRGAVESTP-EVASFHVNVAVGYGGRREIVDAVRALLSKELANG 179
RTVGDL L+G+EPARRLR AVEST +FHVNVAV YGGR+EIVDAVRALLSK+LA+G
Sbjct 121 RTVGDLSLLGDEPARRLRDAVESTTGNGTAFHVNVAVAYGGRQEIVDAVRALLSKKLADG 180
Query 180 ATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWP 239
T E+LV+AVT E ISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEA+WP
Sbjct 181 VTGEKLVEAVTAEAISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWP 240
Query 240 AFRHVDFLRAL 250
AFR VDFLRAL
Sbjct 241 AFRRVDFLRAL 251
>gi|119870242|ref|YP_940194.1| undecaprenyl pyrophosphate synthetase [Mycobacterium sp. KMS]
gi|119696331|gb|ABL93404.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium sp. KMS]
Length=263
Score = 421 bits (1082), Expect = 6e-116, Method: Compositional matrix adjust.
Identities = 209/251 (84%), Positives = 224/251 (90%), Gaps = 1/251 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
++IIP LKEP YRLYE+RLRQ L SKS LPRHIAVLCDGNRRWAR AG+DDVSYGYR+
Sbjct 1 MDIIPRGLKEPAYRLYEMRLRQELMRSKSQLPRHIAVLCDGNRRWARDAGHDDVSYGYRV 60
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GAAKIAEMLRWC AGIE+ATVYLLSTENLQRD DELA LIEIIT VVEEICAPAN WSV
Sbjct 61 GAAKIAEMLRWCQAAGIEMATVYLLSTENLQRDADELAELIEIITGVVEEICAPANRWSV 120
Query 121 RTVGDLGLIGEEPARRLRGAVESTP-EVASFHVNVAVGYGGRREIVDAVRALLSKELANG 179
RTVGDL L+G+EPARRLR AVEST +FHVNVAV YGGR+EIVDAVRALLSK+LA+G
Sbjct 121 RTVGDLSLLGDEPARRLRDAVESTTGNGTAFHVNVAVAYGGRQEIVDAVRALLSKKLADG 180
Query 180 ATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWP 239
T E+LV+AVT E ISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEA+WP
Sbjct 181 VTGEQLVEAVTAEAISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWP 240
Query 240 AFRHVDFLRAL 250
AFR VDFLRAL
Sbjct 241 AFRRVDFLRAL 251
>gi|108801101|ref|YP_641298.1| undecaprenyl pyrophosphate synthetase [Mycobacterium sp. MCS]
gi|108771520|gb|ABG10242.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium sp. MCS]
Length=246
Score = 398 bits (1022), Expect = 6e-109, Method: Compositional matrix adjust.
Identities = 197/234 (85%), Positives = 210/234 (90%), Gaps = 1/234 (0%)
Query 18 LRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGI 77
+RLRQ L SKS LPRHIAVLCDGNRRWAR AG+DDVSYGYR+GAAKIAEMLRWC AGI
Sbjct 1 MRLRQELMRSKSQLPRHIAVLCDGNRRWARDAGHDDVSYGYRVGAAKIAEMLRWCQAAGI 60
Query 78 ELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVRTVGDLGLIGEEPARRL 137
E+ATVYLLSTENLQRD DELA LIEIIT VVEEICAPAN WSVRTVGDL L+G+EPARRL
Sbjct 61 EMATVYLLSTENLQRDADELAELIEIITGVVEEICAPANRWSVRTVGDLSLLGDEPARRL 120
Query 138 RGAVESTP-EVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISE 196
R AVEST +FHVNVAV YGGR+EIVDAVRALLSK+LA+G T E+LV+AVT E ISE
Sbjct 121 RDAVESTTGNGTAFHVNVAVAYGGRQEIVDAVRALLSKKLADGVTGEQLVEAVTAEAISE 180
Query 197 NLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRAL 250
NLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEA+WPAFR VDFLRAL
Sbjct 181 NLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWPAFRRVDFLRAL 234
>gi|289573741|ref|ZP_06453968.1| short chain Z-isoprenyl diphosphate synthase [Mycobacterium tuberculosis
K85]
gi|289538172|gb|EFD42750.1| short chain Z-isoprenyl diphosphate synthase [Mycobacterium tuberculosis
K85]
Length=202
Score = 380 bits (977), Expect = 7e-104, Method: Compositional matrix adjust.
Identities = 190/192 (99%), Positives = 191/192 (99%), Gaps = 0/192 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
+EIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM
Sbjct 1 MEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV
Sbjct 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
Query 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA
Sbjct 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
Query 181 TAEELVDAVTVE 192
TAEELVDAV VE
Sbjct 181 TAEELVDAVPVE 192
>gi|296140818|ref|YP_003648061.1| undecaprenyl diphosphate synthase [Tsukamurella paurometabola
DSM 20162]
gi|296028952|gb|ADG79722.1| undecaprenyl diphosphate synthase [Tsukamurella paurometabola
DSM 20162]
Length=281
Score = 362 bits (928), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 185/258 (72%), Positives = 211/258 (82%), Gaps = 3/258 (1%)
Query 7 RLKEPLYRLYELRLRQGLAASKSD---LPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAA 63
+L P Y LYE RL L A+ D PRH+AVLCDGNRRWAR+AG+DDVS+GYRMGA
Sbjct 23 KLVAPAYALYERRLISDLTAAYRDGAQRPRHVAVLCDGNRRWARAAGFDDVSHGYRMGAK 82
Query 64 KIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVRTV 123
KIAEML WC EAG+ELAT+YLLSTENL+RDP+ELAAL+EIITDVVEEI P +WSV+ V
Sbjct 83 KIAEMLEWCDEAGVELATIYLLSTENLRRDPEELAALLEIITDVVEEISGPDKNWSVKIV 142
Query 124 GDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAE 183
G + L+ E ARRL A E T HVNVAVGYGGR+EIVDAV +LL ++L GA+AE
Sbjct 143 GAMDLLPEAAARRLTAAAEGTKGRTGAHVNVAVGYGGRKEIVDAVHSLLDEKLREGASAE 202
Query 184 ELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRH 243
EL DAVTVEGI ++LYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSE+WFTEA+WP FR
Sbjct 203 ELADAVTVEGIDQHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFRR 262
Query 244 VDFLRALRDYSARHRSYG 261
VDFLRALRDY+ARHR +G
Sbjct 263 VDFLRALRDYAARHRRFG 280
>gi|333921070|ref|YP_004494651.1| Undecaprenyl diphosphate synthase [Amycolicicoccus subflavus
DQS3-9A1]
gi|333483292|gb|AEF41852.1| Undecaprenyl diphosphate synthase [Amycolicicoccus subflavus
DQS3-9A1]
Length=256
Score = 362 bits (928), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 180/258 (70%), Positives = 209/258 (82%), Gaps = 5/258 (1%)
Query 4 IPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAA 63
IPP P+YRLYE RL L + P+HIAVLCDGNRRWAR+AG+ DVS+GYRMGA
Sbjct 3 IPP---NPVYRLYEQRLLHRLEGMQR--PKHIAVLCDGNRRWARAAGFTDVSHGYRMGAR 57
Query 64 KIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVRTV 123
KIAEML+WC EAG+E AT+YLLSTENL RDPDELAAL+EIITDVVEEI P +WSV+ V
Sbjct 58 KIAEMLQWCDEAGVEHATIYLLSTENLGRDPDELAALLEIITDVVEEISGPDKNWSVQIV 117
Query 124 GDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAE 183
G + L+ E A RL A E T + HVNVAVGYGGR+EI DAVRAL+ + LA G T +
Sbjct 118 GAMELLPESAATRLTEAAERTQGRSGTHVNVAVGYGGRQEISDAVRALIRRRLAEGRTGD 177
Query 184 ELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRH 243
EL+++++VEGI+E+LYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSE+WFTEA+WP FR
Sbjct 178 ELIESISVEGIAEHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFRR 237
Query 244 VDFLRALRDYSARHRSYG 261
VDFLRALRDY ARHR +G
Sbjct 238 VDFLRALRDYGARHRRFG 255
>gi|54026792|ref|YP_121034.1| putative undecaprenyl pyrophosphate synthetase [Nocardia farcinica
IFM 10152]
gi|54018300|dbj|BAD59670.1| putative undecaprenyl pyrophosphate synthetase [Nocardia farcinica
IFM 10152]
Length=262
Score = 342 bits (878), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 166/255 (66%), Positives = 200/255 (79%), Gaps = 2/255 (0%)
Query 7 RLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIA 66
R++ YR+YE RL + LA + PRH+AV+CDGNRRWAR G+ DVS+G+R+GA KIA
Sbjct 9 RVRGLPYRIYEARLVKQLAGRQH--PRHVAVMCDGNRRWARENGFTDVSHGHRVGALKIA 66
Query 67 EMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVRTVGDL 126
E++ WC +AGIE+ TVYLLSTENLQRDP+EL L E+ITDVVEE+ AP WSVR VG L
Sbjct 67 ELVEWCSQAGIEMVTVYLLSTENLQRDPEELETLFEVITDVVEELSAPERDWSVRIVGSL 126
Query 127 GLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELV 186
E A+R+R A E T HVNVAVGYGGR+EI DAVR+L+ +E+A G T E+LV
Sbjct 127 DGFPELIAKRMRTAAEQTEGRRGVHVNVAVGYGGRQEIADAVRSLVRQEIAAGETGEDLV 186
Query 187 DAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDF 246
++TV I ++LYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSE+WFTE +WP FR VDF
Sbjct 187 QSITVNAIGQHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEVYWPEFRRVDF 246
Query 247 LRALRDYSARHRSYG 261
LRALRDY+ARHR +G
Sbjct 247 LRALRDYAARHRRFG 261
>gi|343925095|ref|ZP_08764627.1| undecaprenyl pyrophosphate synthase [Gordonia alkanivorans NBRC
16433]
gi|343765026|dbj|GAA11553.1| undecaprenyl pyrophosphate synthase [Gordonia alkanivorans NBRC
16433]
Length=260
Score = 342 bits (876), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 167/262 (64%), Positives = 204/262 (78%), Gaps = 2/262 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
++++P R++ P +YE RL Q L + LPRH+A++CDGNRRWAR AG+DDVS+G+R+
Sbjct 1 MKLLPDRVRRPALTIYERRLIQLLDTQR--LPRHVAIICDGNRRWAREAGFDDVSHGHRV 58
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GA +IA+ML WC GIE T+YLLSTENL R DEL AL+EI+ D+V+EI +P W +
Sbjct 59 GAQRIADMLGWCAGLGIEAVTIYLLSTENLNRSSDELDALLEIVPDIVDEISSPDGDWCI 118
Query 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
R VG L + E A RLR A E T E +VNVAVGYGGR+EIVDAVRALL ++ A GA
Sbjct 119 RIVGTLDALPEAVAGRLRVAAERTSERDGMNVNVAVGYGGRQEIVDAVRALLDEKRAAGA 178
Query 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
TAEE+++AVTVE I NLYT GQPDPDLVIRTSGEQRLSGFLLWQSAYSE+WFT+A+WP
Sbjct 179 TAEEMIEAVTVEAIDANLYTKGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTDAYWPE 238
Query 241 FRHVDFLRALRDYSARHRSYGR 262
FR VDFLRALRDYSAR R +G+
Sbjct 239 FRRVDFLRALRDYSARSRRFGK 260
>gi|226365327|ref|YP_002783110.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus opacus
B4]
gi|226243817|dbj|BAH54165.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus opacus
B4]
Length=255
Score = 342 bits (876), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 167/250 (67%), Positives = 200/250 (80%), Gaps = 2/250 (0%)
Query 12 LYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRW 71
LY +YE RL + L + PRHIAV+CDGNRRWAR G++DVS+G+RMGA KI+EML W
Sbjct 7 LYSIYERRLLKRLDGLQH--PRHIAVMCDGNRRWARENGFEDVSHGHRMGALKISEMLGW 64
Query 72 CHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVRTVGDLGLIGE 131
C AGIE+AT+YLLSTENL+RDP+EL L+EIITDVVEEI P +WSV+ VG L L+
Sbjct 65 CDAAGIEMATIYLLSTENLRRDPEELDTLLEIITDVVEEISGPDKNWSVKIVGALDLLPA 124
Query 132 EPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTV 191
E +RRLR A T HVNVA+GYGGR+EI DAV++LLS++L G +ELV ++TV
Sbjct 125 EQSRRLRDAAAGTEGRTGTHVNVAIGYGGRQEIADAVQSLLSEKLLAGLAGDELVKSITV 184
Query 192 EGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALR 251
+GI +LYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSE+WFTEA+WP FR VDFLRALR
Sbjct 185 DGIDGHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFRRVDFLRALR 244
Query 252 DYSARHRSYG 261
DY+ARHR +G
Sbjct 245 DYAARHRRFG 254
>gi|289573742|ref|ZP_06453969.1| short chain Z-isoprenyl diphosphate synthase [Mycobacterium tuberculosis
K85]
gi|289538173|gb|EFD42751.1| short chain Z-isoprenyl diphosphate synthase [Mycobacterium tuberculosis
K85]
Length=171
Score = 340 bits (873), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 168/170 (99%), Positives = 169/170 (99%), Gaps = 0/170 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
+EIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM
Sbjct 1 MEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV
Sbjct 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
Query 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRA 170
RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVD VRA
Sbjct 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDVVRA 170
>gi|325676569|ref|ZP_08156247.1| undecaprenyl diphosphate synthase [Rhodococcus equi ATCC 33707]
gi|325552747|gb|EGD22431.1| undecaprenyl diphosphate synthase [Rhodococcus equi ATCC 33707]
Length=255
Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/255 (67%), Positives = 205/255 (81%), Gaps = 2/255 (0%)
Query 7 RLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIA 66
+L+ LY +YE RL + L + PRH+AV+CDGNRRWAR G+ DVS+G+RMGA KIA
Sbjct 2 KLRGLLYSIYERRLLRRLDGLQH--PRHVAVMCDGNRRWARENGFTDVSHGHRMGARKIA 59
Query 67 EMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVRTVGDL 126
E+LRWC AGIE+AT+YLLSTENL+R+P+EL L+EIIT+VVEEI P +WSV+ VG L
Sbjct 60 ELLRWCDAAGIEMATIYLLSTENLRREPEELDTLLEIITEVVEEISGPGKNWSVKIVGTL 119
Query 127 GLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELV 186
L+ E+ ARRLR A E T HVNVAVGYGGR+EI DAV++LL +LA G T ++LV
Sbjct 120 DLLPEDQARRLREAAEGTRGRTGTHVNVAVGYGGRQEIADAVQSLLRDKLAAGLTGDDLV 179
Query 187 DAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDF 246
A++VEGI +LYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSE+WFTEA+WP FR VDF
Sbjct 180 KAMSVEGIDGHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFRRVDF 239
Query 247 LRALRDYSARHRSYG 261
LRALRDY+ARHR +G
Sbjct 240 LRALRDYAARHRRFG 254
>gi|111022819|ref|YP_705791.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus jostii
RHA1]
gi|110822349|gb|ABG97633.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus jostii
RHA1]
Length=279
Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 165/250 (66%), Positives = 200/250 (80%), Gaps = 2/250 (0%)
Query 12 LYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRW 71
LY +YE RL + L + PRHIAV+CDGNRRWAR G++DVS+G+RMGA KI+EML W
Sbjct 31 LYSIYERRLLKRLDGLQH--PRHIAVMCDGNRRWARENGFEDVSHGHRMGALKISEMLGW 88
Query 72 CHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVRTVGDLGLIGE 131
C AGIE+AT+YLLSTENL+RDP EL L+EIITDVVEEI P +WSV+ VG L L+
Sbjct 89 CDAAGIEMATIYLLSTENLRRDPGELDTLLEIITDVVEEISGPDKNWSVKIVGALDLLPA 148
Query 132 EPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTV 191
E +RRLR A T HVNVA+GYGGR+EI DAV++LLS++L G + ++LV ++T+
Sbjct 149 EQSRRLRDAAAGTEGRTGTHVNVAIGYGGRQEIADAVQSLLSEKLLAGLSGDDLVKSITI 208
Query 192 EGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALR 251
+GI +LYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSE+WFTEA+WP FR VDFLRALR
Sbjct 209 DGIDGHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFRRVDFLRALR 268
Query 252 DYSARHRSYG 261
DY+ARHR +G
Sbjct 269 DYAARHRRFG 278
>gi|312138738|ref|YP_004006074.1| undecaprenyl diphosphate synthase [Rhodococcus equi 103S]
gi|311888077|emb|CBH47389.1| undecaprenyl diphosphate synthase [Rhodococcus equi 103S]
Length=255
Score = 338 bits (868), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 169/255 (67%), Positives = 205/255 (81%), Gaps = 2/255 (0%)
Query 7 RLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIA 66
+L+ LY +YE RL + L + PRH+AV+CDGNRRWAR G+ DVS+G+RMGA KIA
Sbjct 2 KLRGLLYSIYERRLLRRLDGLQH--PRHVAVMCDGNRRWARENGFTDVSHGHRMGARKIA 59
Query 67 EMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVRTVGDL 126
E+LRWC AGIE+AT+YLLSTENL+R+P+EL L+EIIT+VVEEI P +WSV+ VG L
Sbjct 60 ELLRWCDAAGIEMATIYLLSTENLRREPEELDTLLEIITEVVEEISGPGKNWSVKIVGTL 119
Query 127 GLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELV 186
L+ E+ ARRLR A + T HVNVAVGYGGR+EI DAV++LL +LA G T ++LV
Sbjct 120 DLLPEDQARRLREAADGTRGRTGTHVNVAVGYGGRQEIADAVQSLLRDKLAAGLTGDDLV 179
Query 187 DAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDF 246
A++VEGI +LYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSE+WFTEA+WP FR VDF
Sbjct 180 KAMSVEGIDGHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFRRVDF 239
Query 247 LRALRDYSARHRSYG 261
LRALRDY+ARHR +G
Sbjct 240 LRALRDYAARHRRFG 254
>gi|226307742|ref|YP_002767702.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus erythropolis
PR4]
gi|229493884|ref|ZP_04387656.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus erythropolis
SK121]
gi|226186859|dbj|BAH34963.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus erythropolis
PR4]
gi|229319161|gb|EEN85010.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus erythropolis
SK121]
Length=255
Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 165/254 (65%), Positives = 198/254 (78%), Gaps = 2/254 (0%)
Query 8 LKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAE 67
L+ LY +YE RL L PRH+AV+CDGNRRWAR G+ DVS+G+RMGA KIAE
Sbjct 3 LRGLLYSIYERRLLSHLDGLAH--PRHVAVMCDGNRRWARENGFTDVSHGHRMGALKIAE 60
Query 68 MLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVRTVGDLG 127
+L WC AGIE+AT+YLLSTENL+R+P+EL L+EIITDVVEEI P +WSV+ VG L
Sbjct 61 LLEWCDAAGIEMATIYLLSTENLRREPEELDTLLEIITDVVEEISGPGKNWSVQIVGALD 120
Query 128 LIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVD 187
L+ E +RRLR A T HVNVA+GYGGR+EI DAV++LL ++ G + +EL+
Sbjct 121 LLPPEQSRRLREAAAGTSGRTGTHVNVAIGYGGRQEIADAVQSLLRDKIGAGLSGDELIQ 180
Query 188 AVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFL 247
AVTV+GI +LYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSE+WFTEA+WP FR VDFL
Sbjct 181 AVTVDGIDGHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFRRVDFL 240
Query 248 RALRDYSARHRSYG 261
RALRDY+ARHR +G
Sbjct 241 RALRDYAARHRRFG 254
>gi|262201612|ref|YP_003272820.1| undecaprenyl diphosphate synthase [Gordonia bronchialis DSM 43247]
gi|262084959|gb|ACY20927.1| undecaprenyl diphosphate synthase [Gordonia bronchialis DSM 43247]
Length=260
Score = 333 bits (853), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 162/262 (62%), Positives = 203/262 (78%), Gaps = 2/262 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
++++P RL+ P+ +YE RL Q + ++ +PRH+A++CDGNRRWAR AG++DVS+G+R+
Sbjct 1 MKLLPDRLRRPVLSIYERRLIQLMDMAR--IPRHVAIICDGNRRWAREAGFEDVSHGHRV 58
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GA +IA+ML WC + GI T+YLLSTENL R+ DEL AL+EI+ D+V+EI AP W V
Sbjct 59 GAQRIADMLGWCADLGIGAVTIYLLSTENLSRESDELDALMEIVPDIVDEISAPDGQWRV 118
Query 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
R VG L + A RLR A + T +VNVAVGYGGR+EIVDAVRALL + L GA
Sbjct 119 RIVGTLDNLPGVVADRLRAASDRTRGRDGMNVNVAVGYGGRQEIVDAVRALLEERLTAGA 178
Query 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
T E++DAVTVE I NLYT GQPDPDLVIRTSGEQRLSGFLLWQSAYSE+WFT+A+WP
Sbjct 179 TPAEMIDAVTVEAIDANLYTKGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTDAYWPE 238
Query 241 FRHVDFLRALRDYSARHRSYGR 262
FR VDFLRALRDYSAR+R +G+
Sbjct 239 FRRVDFLRALRDYSARNRRFGK 260
>gi|167966591|ref|ZP_02548868.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis H37Ra]
Length=163
Score = 331 bits (848), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 163/163 (100%), Positives = 163/163 (100%), Gaps = 0/163 (0%)
Query 100 LIEIITDVVEEICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYG 159
LIEIITDVVEEICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYG
Sbjct 1 LIEIITDVVEEICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYG 60
Query 160 GRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLS 219
GRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLS
Sbjct 61 GRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLS 120
Query 220 GFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRSYGR 262
GFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRSYGR
Sbjct 121 GFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRSYGR 163
>gi|319950189|ref|ZP_08024116.1| putative undecaprenyl pyrophosphate synthetase [Dietzia cinnamea
P4]
gi|319436093|gb|EFV91286.1| putative undecaprenyl pyrophosphate synthetase [Dietzia cinnamea
P4]
Length=295
Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/252 (65%), Positives = 195/252 (78%), Gaps = 2/252 (0%)
Query 11 PLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLR 70
PLY+ YE RLR L + LPRH+AV+CDGNRRWA+ AG+ DV++G+R GA KIAEML
Sbjct 46 PLYKFYESRLRSSLEGKR--LPRHVAVMCDGNRRWAKEAGFTDVAHGHRAGAVKIAEMLG 103
Query 71 WCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVRTVGDLGLIG 130
WC E GI++AT+YLLSTENL RD DEL L++II DVV+EI P +W VR VG L L+
Sbjct 104 WCDELGIDVATIYLLSTENLGRDADELGELLQIIADVVDEITRPERNWEVRIVGRLELLP 163
Query 131 EEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVT 190
E A RLR A + + VNVAVGYGGR+EI DA R L+ + + G T +LVD +T
Sbjct 164 EWLADRLRHAEQVSTGRPGVKVNVAVGYGGRQEIADAARELVEQLIDEGRTGADLVDGIT 223
Query 191 VEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRAL 250
VEGI E+LYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSE+WFTEA+WPAFR VDFLRAL
Sbjct 224 VEGIGEHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEAYWPAFRRVDFLRAL 283
Query 251 RDYSARHRSYGR 262
R+YSAR+R +G+
Sbjct 284 REYSARNRRFGQ 295
>gi|326381834|ref|ZP_08203527.1| undecaprenyl diphosphate synthase [Gordonia neofelifaecis NRRL
B-59395]
gi|326199260|gb|EGD56441.1| undecaprenyl diphosphate synthase [Gordonia neofelifaecis NRRL
B-59395]
Length=260
Score = 319 bits (818), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 156/262 (60%), Positives = 202/262 (78%), Gaps = 2/262 (0%)
Query 1 VEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRM 60
++++P RL+ + R+YE RL Q + + +PRH+A++CDGNRRWAR AG++DVS+G+R+
Sbjct 1 MKLLPDRLRGGMLRVYEHRLVQLMDPER--IPRHVAIICDGNRRWAREAGFEDVSHGHRV 58
Query 61 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSV 120
GA +IA+ML WC E GIE T+YLLSTENL R+ DEL AL+EI+ D+V+EI W V
Sbjct 59 GAQRIADMLGWCSELGIEAVTIYLLSTENLTRESDELDALMEIVPDIVDEISDVDADWRV 118
Query 121 RTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGA 180
R VG+L + A+RLR A T A VNVAVGYGGR+EIVDAV+ LL + + GA
Sbjct 119 RIVGNLDQLPAPVAQRLREASSRTEGAADMTVNVAVGYGGRQEIVDAVQQLLVEAVEAGA 178
Query 181 TAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPA 240
+ EE+V A++VEGI +LYTSG PDPDLVIRTSGEQRLSGFLLWQSAYSE+WFT+A+WP
Sbjct 179 SREEMVRAISVEGIDSHLYTSGTPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTDAYWPE 238
Query 241 FRHVDFLRALRDYSARHRSYGR 262
FR VDFLRALRD++AR+R +G+
Sbjct 239 FRRVDFLRALRDFAARNRRFGK 260
>gi|296394377|ref|YP_003659261.1| undecaprenyl diphosphate synthase [Segniliparus rotundus DSM
44985]
gi|296181524|gb|ADG98430.1| undecaprenyl diphosphate synthase [Segniliparus rotundus DSM
44985]
Length=264
Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 156/249 (63%), Positives = 194/249 (78%), Gaps = 2/249 (0%)
Query 13 YRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWC 72
Y LYE ++ + L +K LP+HIAVLCDGNRRWAR+ G+ DVS+G+R+GA KIAE L WC
Sbjct 17 YGLYERQVEKQLRGAK--LPQHIAVLCDGNRRWARANGFADVSHGHRVGALKIAEFLSWC 74
Query 73 HEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVRTVGDLGLIGEE 132
G+ TV+LLSTENL+RDP+ELAAL+++I +VV E+CAP +W VR VG L + EE
Sbjct 75 DAEGVGHVTVWLLSTENLRRDPEELAALLDVIHEVVAELCAPDKNWQVRIVGALEFLPEE 134
Query 133 PARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVE 192
A L + + T HVNVAVGYGGR+EI DAVR+L++++L+ G T ELV ++ V
Sbjct 135 FATNLLRSAKQTVGRTGNHVNVAVGYGGRQEISDAVRSLVAEKLSAGLTGNELVQSIDVA 194
Query 193 GISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRD 252
GI E+LYTSGQPDPDLVIRTSGEQRLSGFLLWQS +SE+WFTEA+WP FR VDFLRALRD
Sbjct 195 GIGEHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSVHSEIWFTEAYWPEFRRVDFLRALRD 254
Query 253 YSARHRSYG 261
Y+ARHR +G
Sbjct 255 YAARHRRFG 263
>gi|317508404|ref|ZP_07966074.1| di-trans,poly-cis-decaprenylcistransferase [Segniliparus rugosus
ATCC BAA-974]
gi|316253251|gb|EFV12651.1| di-trans,poly-cis-decaprenylcistransferase [Segniliparus rugosus
ATCC BAA-974]
Length=264
Score = 315 bits (807), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 155/250 (62%), Positives = 192/250 (77%), Gaps = 2/250 (0%)
Query 12 LYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRW 71
+Y LYE ++ + L ++ LP HIAVLCDGNRRWAR+ G+ DVS+G+R+GA KIAE L W
Sbjct 16 VYGLYERQVERQLRGAR--LPEHIAVLCDGNRRWARANGFSDVSHGHRVGALKIAEFLSW 73
Query 72 CHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVRTVGDLGLIGE 131
C GI TV+LLSTENL+RDP+EL+AL++II +VV E+CAP +W VR VG L + E
Sbjct 74 CDAEGIGHVTVWLLSTENLRRDPEELSALLDIIHEVVAELCAPDKNWQVRIVGALEFLPE 133
Query 132 EPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTV 191
E A L + + T HVNVAVGYGGR+EI DAVR+L++ LA+G +ELVD++ V
Sbjct 134 EFAANLVSSAKKTVGRTGGHVNVAVGYGGRQEISDAVRSLVADRLASGLAGQELVDSIDV 193
Query 192 EGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALR 251
I E+LYTSGQPDPDLVIRTSGEQRLSGFLLWQS +SE+WFTEA WP FR VDFLRA+R
Sbjct 194 AAIGEHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSVHSEIWFTEAFWPEFRRVDFLRAMR 253
Query 252 DYSARHRSYG 261
DY+ARHR +G
Sbjct 254 DYAARHRRFG 263
>gi|300858143|ref|YP_003783126.1| hypothetical protein cpfrc_00725 [Corynebacterium pseudotuberculosis
FRC41]
gi|300685597|gb|ADK28519.1| hypothetical protein cpfrc_00725 [Corynebacterium pseudotuberculosis
FRC41]
gi|302205864|gb|ADL10206.1| Undecaprenyl pyrophosphate synthase 1 [Corynebacterium pseudotuberculosis
C231]
gi|302330422|gb|ADL20616.1| Undecaprenyl pyrophosphate synthase 1 [Corynebacterium pseudotuberculosis
1002]
gi|308276099|gb|ADO25998.1| Putative undecaprenyl pyrophosphate synthetase [Corynebacterium
pseudotuberculosis I19]
gi|341824536|gb|AEK92057.1| Undecaprenyl pyrophosphate synthase 1 [Corynebacterium pseudotuberculosis
PAT10]
Length=265
Score = 312 bits (800), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/255 (60%), Positives = 191/255 (75%), Gaps = 2/255 (0%)
Query 8 LKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAE 67
L+ LY YE RL + +A +K P H+A++CDGNRRWAR AG+ DV++G+R+GA K+ E
Sbjct 13 LQVVLYPFYEKRLLREIAGAKQ--PSHVAIMCDGNRRWAREAGFADVTHGHRVGAKKVGE 70
Query 68 MLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVRTVGDLG 127
M+RWC + +EL TVYLLSTENL R DEL L +II DVV+E+ AP + +R VG L
Sbjct 71 MVRWCKDTDVELVTVYLLSTENLGRASDELDMLFDIIGDVVDELAAPETNCRLRLVGHLD 130
Query 128 LIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVD 187
L+ E A R+ A E T VNVAVGYGGR+EIVDAVR L+S E+ +G E++ D
Sbjct 131 LLPPEVAERMNYAQEKTAHNTGVAVNVAVGYGGRQEIVDAVRELISGEVESGTEPEKIAD 190
Query 188 AVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFL 247
VTVE IS++LYTSGQPDPDLVIRTSGEQRLSGFLLWQ+AYSE+WFT+ +WPAFR VDFL
Sbjct 191 KVTVESISKHLYTSGQPDPDLVIRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRRVDFL 250
Query 248 RALRDYSARHRSYGR 262
RALR+YS R R +G+
Sbjct 251 RALREYSKRSRRFGK 265
>gi|305681959|ref|ZP_07404763.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium matruchotii
ATCC 14266]
gi|305658432|gb|EFM47935.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium matruchotii
ATCC 14266]
Length=258
Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/260 (59%), Positives = 191/260 (74%), Gaps = 2/260 (0%)
Query 3 IIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGA 62
+IPP L LY LYE RL + ++ +K P H+A++CDGNRRWAR AG+ DVS+G+R+GA
Sbjct 1 MIPPILPALLYPLYERRLLREISGAKR--PEHVAIMCDGNRRWAREAGFIDVSHGHRVGA 58
Query 63 AKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVRT 122
KI E++ WC + +EL T+YLLSTENL RD +EL L++II DVV E+ AP + VR
Sbjct 59 KKIGELVSWCADTDVELVTIYLLSTENLGRDAEELQLLLDIICDVVAELSAPHRNCRVRL 118
Query 123 VGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATA 182
VG L L+ E + RL + E T VNVAVGYGGR+EIVDAVR ++ E G T
Sbjct 119 VGHLNLLPEHISHRLSVSSEQTKTNTGVTVNVAVGYGGRQEIVDAVRDFIASEAREGTTT 178
Query 183 EELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFR 242
ELV+ V+ E I+ +LYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSE+WFT+ +WPAFR
Sbjct 179 TELVEKVSAEAIASHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTDTYWPAFR 238
Query 243 HVDFLRALRDYSARHRSYGR 262
+DFLRALR+YS R R +G+
Sbjct 239 RLDFLRALREYSKRSRRFGK 258
>gi|337290395|ref|YP_004629416.1| hypothetical protein CULC22_00784 [Corynebacterium ulcerans BR-AD22]
gi|334698701|gb|AEG83497.1| hypothetical protein CULC22_00784 [Corynebacterium ulcerans BR-AD22]
Length=265
Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 151/255 (60%), Positives = 190/255 (75%), Gaps = 2/255 (0%)
Query 8 LKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAE 67
L+ LY YE RL +A +K P H+A++CDGNRRWAR AG+ DV++G+R+GA K+ E
Sbjct 13 LQAVLYPFYEKRLLGEIAGAKQ--PSHVAIMCDGNRRWAREAGFADVTHGHRVGAKKVGE 70
Query 68 MLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVRTVGDLG 127
M+RWC + +EL TVYLLSTENL R DEL L +II DVV+E+ P + +R VG L
Sbjct 71 MVRWCKDTDVELVTVYLLSTENLGRASDELDMLFDIIGDVVDELADPEINCRLRLVGHLD 130
Query 128 LIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVD 187
L+ E A R+ A E T VNVAVGYGGR+EIVDAVR L+S E+ +G AE++ D
Sbjct 131 LLPPEVAERMNYAQEKTAHNTGVAVNVAVGYGGRQEIVDAVRELISGEVESGTAAEQIAD 190
Query 188 AVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFL 247
VTV+ IS++LYTSGQPDPDLVIRTSGEQRLSGFLLWQ+AYSE+WFT+ +WPAFR +DFL
Sbjct 191 KVTVDSISKHLYTSGQPDPDLVIRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRRLDFL 250
Query 248 RALRDYSARHRSYGR 262
RALR+YS R R +G+
Sbjct 251 RALREYSKRSRRFGK 265
>gi|225022973|ref|ZP_03712165.1| hypothetical protein CORMATOL_03019 [Corynebacterium matruchotii
ATCC 33806]
gi|224944196|gb|EEG25405.1| hypothetical protein CORMATOL_03019 [Corynebacterium matruchotii
ATCC 33806]
Length=258
Score = 308 bits (790), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 151/260 (59%), Positives = 190/260 (74%), Gaps = 2/260 (0%)
Query 3 IIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGA 62
+IPP L LY LYE RL + ++ +K P H+A++CDGNRRWAR AG+ DVS+G+R+GA
Sbjct 1 MIPPILPALLYPLYERRLLREISGAKR--PEHVAIMCDGNRRWAREAGFIDVSHGHRVGA 58
Query 63 AKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVRT 122
KI E++ WC + +EL T+YLLSTENL RD +EL L++II DVV E+ P + VR
Sbjct 59 KKIGELVSWCADTDVELVTIYLLSTENLGRDAEELQLLLDIICDVVAELSTPHRNCRVRL 118
Query 123 VGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATA 182
VG L L+ E + RL + E T VNVAVGYGGR+EIVDAVR ++ E G T
Sbjct 119 VGHLNLLPEHISHRLSVSSEQTKTNTGVTVNVAVGYGGRQEIVDAVRDFIASEARKGTTT 178
Query 183 EELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFR 242
ELV+ V+ E I+ +LYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSE+WFT+ +WPAFR
Sbjct 179 TELVEKVSAEAIASHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTDTYWPAFR 238
Query 243 HVDFLRALRDYSARHRSYGR 262
+DFLRALR+YS R R +G+
Sbjct 239 RLDFLRALREYSKRSRRFGK 258
Lambda K H
0.320 0.136 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 391676602750
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40