BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1087 Length=767 Score E Sequences producing significant alignments: (Bits) Value gi|57116821|ref|YP_177783.1| PE-PGRS family protein [Mycobacteri... 1217 0.0 gi|253799877|ref|YP_003032878.1| PE-PGRS family protein [Mycobac... 205 2e-50 gi|148822296|ref|YP_001287050.1| PE-PGRS family protein [Mycobac... 205 2e-50 gi|344218914|gb|AEM99544.1| PE-PGRS family protein [Mycobacteriu... 205 3e-50 gi|31792278|ref|NP_854771.1| PE-PGRS family protein [Mycobacteri... 205 3e-50 gi|339631151|ref|YP_004722793.1| PE-PGRS family protein [Mycobac... 204 4e-50 gi|121637016|ref|YP_977239.1| PE-PGRS family protein [Mycobacter... 204 4e-50 gi|340626099|ref|YP_004744551.1| PE-PGRS family protein [Mycobac... 203 1e-49 gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobac... 149 2e-33 gi|340626105|ref|YP_004744557.1| PE-PGRS family protein [Mycobac... 144 6e-32 gi|339296212|gb|AEJ48323.1| hypothetical protein CCDC5079_3134 [... 142 2e-31 gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted p... 140 1e-30 gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobac... 139 1e-30 gi|148824595|ref|YP_001289349.1| PE-PGRS family protein [Mycobac... 137 1e-29 gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS... 136 2e-29 gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobact... 135 2e-29 gi|339631519|ref|YP_004723161.1| PE-PGRS family protein [Mycobac... 135 4e-29 gi|57117101|ref|YP_177968.1| PE-PGRS family protein [Mycobacteri... 134 5e-29 gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacter... 134 6e-29 gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobac... 134 7e-29 gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobact... 134 8e-29 gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacteri... 133 1e-28 gi|183985312|ref|YP_001853603.1| PE-PGRS family protein [Mycobac... 133 1e-28 gi|31792646|ref|NP_855139.1| PE-PGRS family protein [Mycobacteri... 132 2e-28 gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobac... 131 4e-28 gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobac... 131 4e-28 gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobac... 130 1e-27 gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobac... 130 1e-27 gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobac... 129 2e-27 gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobac... 129 3e-27 gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobac... 127 5e-27 gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531... 127 9e-27 gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacteri... 127 1e-26 gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacteri... 127 1e-26 gi|57116996|ref|YP_177887.1| PE-PGRS family protein [Mycobacteri... 127 1e-26 gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobac... 127 1e-26 gi|183984569|ref|YP_001852860.1| PE-PGRS family protein [Mycobac... 127 1e-26 gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacteriu... 127 1e-26 gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted p... 127 1e-26 gi|183981221|ref|YP_001849512.1| PE-PGRS family protein [Mycobac... 126 1e-26 gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024... 126 2e-26 gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacteri... 125 2e-26 gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobac... 125 2e-26 gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobac... 125 3e-26 gi|121636496|ref|YP_976719.1| PE-PGRS family protein [Mycobacter... 124 7e-26 gi|15839979|ref|NP_335016.1| PE_PGRS family protein [Mycobacteri... 124 7e-26 gi|148660347|ref|YP_001281870.1| PE-PGRS family protein [Mycobac... 124 8e-26 gi|31791760|ref|NP_854253.1| PE-PGRS family protein [Mycobacteri... 124 8e-26 gi|57116755|ref|YP_177739.1| PE-PGRS family protein [Mycobacteri... 124 8e-26 gi|183983104|ref|YP_001851395.1| PE-PGRS family protein [Mycobac... 120 7e-25 >gi|57116821|ref|YP_177783.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148660872|ref|YP_001282395.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|7446016|pir||E70895 hypothetical glycine-rich protein Rv1087 - Mycobacterium tuberculosis (strain H37RV) gi|41353643|emb|CAE55354.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148505024|gb|ABQ72833.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|339294083|gb|AEJ46194.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079] Length=767 Score = 1217 bits (3149), Expect = 0.0, Method: Compositional matrix adjust. Identities = 767/767 (100%), Positives = 767/767 (100%), Gaps = 0/767 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ Sbjct 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP Sbjct 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 Query 121 LIGDGANGGPGQDGGPGGLLYGNGGNGGTSTTVGMAGGNGGAAGLIGNGGFGGGGGPGAA 180 LIGDGANGGPGQDGGPGGLLYGNGGNGGTSTTVGMAGGNGGAAGLIGNGGFGGGGGPGAA Sbjct 121 LIGDGANGGPGQDGGPGGLLYGNGGNGGTSTTVGMAGGNGGAAGLIGNGGFGGGGGPGAA 180 Query 181 GGNGGAGGWLFGNGGAGGAGGLGVAPGVPGGAGGAGGAGGVGGPAGLWGHGGAGGAGGAG 240 GGNGGAGGWLFGNGGAGGAGGLGVAPGVPGGAGGAGGAGGVGGPAGLWGHGGAGGAGGAG Sbjct 181 GGNGGAGGWLFGNGGAGGAGGLGVAPGVPGGAGGAGGAGGVGGPAGLWGHGGAGGAGGAG 240 Query 241 VAGAGGFEGTIGAGGAGGVGGAGGVGGAGGAGGWLYGDAGAGGDGGVGGAGGTGGLGNRG 300 VAGAGGFEGTIGAGGAGGVGGAGGVGGAGGAGGWLYGDAGAGGDGGVGGAGGTGGLGNRG Sbjct 241 VAGAGGFEGTIGAGGAGGVGGAGGVGGAGGAGGWLYGDAGAGGDGGVGGAGGTGGLGNRG 300 Query 301 GAGGAGGAGGVGGAGGAAGLWGGGGAGGVGGTGGGAGLGAQSVTFSSSLSGLSGGDGGAG 360 GAGGAGGAGGVGGAGGAAGLWGGGGAGGVGGTGGGAGLGAQSVTFSSSLSGLSGGDGGAG Sbjct 301 GAGGAGGAGGVGGAGGAAGLWGGGGAGGVGGTGGGAGLGAQSVTFSSSLSGLSGGDGGAG 360 Query 361 GAGGAGGAGGTGGWLYGGGGAAGSGGDGGTGGQGGAGGAGVFSLFGSGGGPGGNGGVGGV 420 GAGGAGGAGGTGGWLYGGGGAAGSGGDGGTGGQGGAGGAGVFSLFGSGGGPGGNGGVGGV Sbjct 361 GAGGAGGAGGTGGWLYGGGGAAGSGGDGGTGGQGGAGGAGVFSLFGSGGGPGGNGGVGGV 420 Query 421 GGVGGAGGRAGLFGVGGLGGAGGDAGDSGEGGFGGPGLAGGLFGNPGNGGVGGIGGDAAA 480 GGVGGAGGRAGLFGVGGLGGAGGDAGDSGEGGFGGPGLAGGLFGNPGNGGVGGIGGDAAA Sbjct 421 GGVGGAGGRAGLFGVGGLGGAGGDAGDSGEGGFGGPGLAGGLFGNPGNGGVGGIGGDAAA 480 Query 481 GGAGGAGGNGGAGGNGGWLFGNGGAGGSGGDGGAAGRGGAGNLGSAGGINAPAGNPGSGS 540 GGAGGAGGNGGAGGNGGWLFGNGGAGGSGGDGGAAGRGGAGNLGSAGGINAPAGNPGSGS Sbjct 481 GGAGGAGGNGGAGGNGGWLFGNGGAGGSGGDGGAAGRGGAGNLGSAGGINAPAGNPGSGS 540 Query 541 VGIGGAGGAGGTAGLFGDGGAGGAGGAGAAGGFGGISAATPSAGSEGAMGGAGGVGGNAR 600 VGIGGAGGAGGTAGLFGDGGAGGAGGAGAAGGFGGISAATPSAGSEGAMGGAGGVGGNAR Sbjct 541 VGIGGAGGAGGTAGLFGDGGAGGAGGAGAAGGFGGISAATPSAGSEGAMGGAGGVGGNAR 600 Query 601 LLGTGGAGGVGGGGGAGGDGGRGGVATPGGQGGDAGDGGAGGAGGNGGGASGAGGWLLGT 660 LLGTGGAGGVGGGGGAGGDGGRGGVATPGGQGGDAGDGGAGGAGGNGGGASGAGGWLLGT Sbjct 601 LLGTGGAGGVGGGGGAGGDGGRGGVATPGGQGGDAGDGGAGGAGGNGGGASGAGGWLLGT 660 Query 661 GGAGGAGGNGGNGGKAGFSPGPTNFGLNGAGGGGGVGGNGATGPWLFGDGGPTPGSTGAG 720 GGAGGAGGNGGNGGKAGFSPGPTNFGLNGAGGGGGVGGNGATGPWLFGDGGPTPGSTGAG Sbjct 661 GGAGGAGGNGGNGGKAGFSPGPTNFGLNGAGGGGGVGGNGATGPWLFGDGGPTPGSTGAG 720 Query 721 AAGGHGGDAQLIGNGGHGGAGGTGVPNGSGGAGGLSGLLFGEPGANG 767 AAGGHGGDAQLIGNGGHGGAGGTGVPNGSGGAGGLSGLLFGEPGANG Sbjct 721 AAGGHGGDAQLIGNGGHGGAGGTGVPNGSGGAGGLSGLLFGEPGANG 767 >gi|253799877|ref|YP_003032878.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|253321380|gb|ACT25983.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|328459622|gb|AEB05045.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] Length=738 Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ Sbjct 14 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 73 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP Sbjct 74 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 133 Query 121 LIGDGAN 127 LIGDGAN Sbjct 134 LIGDGAN 140 >gi|148822296|ref|YP_001287050.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148720823|gb|ABR05448.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] Length=779 Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ Sbjct 14 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 73 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP Sbjct 74 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 133 Query 121 LIGDGAN 127 LIGDGAN Sbjct 134 LIGDGAN 140 >gi|344218914|gb|AEM99544.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=770 Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ Sbjct 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP Sbjct 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 Query 121 LIGDGAN 127 LIGDGAN Sbjct 121 LIGDGAN 127 >gi|31792278|ref|NP_854771.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31617866|emb|CAD93976.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=774 Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ Sbjct 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP Sbjct 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 Query 121 LIGDGAN 127 LIGDGAN Sbjct 121 LIGDGAN 127 >gi|339631151|ref|YP_004722793.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339330507|emb|CCC26172.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=825 Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ Sbjct 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP Sbjct 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 Query 121 LIGDGAN 127 LIGDGAN Sbjct 121 LIGDGAN 127 >gi|121637016|ref|YP_977239.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989489|ref|YP_002644176.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121492663|emb|CAL71132.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772602|dbj|BAH25408.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601032|emb|CCC63704.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=809 Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ Sbjct 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP Sbjct 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 Query 121 LIGDGAN 127 LIGDGAN Sbjct 121 LIGDGAN 127 >gi|340626099|ref|YP_004744551.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004289|emb|CCC43430.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=825 Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 126/127 (99%), Positives = 126/127 (99%), Gaps = 0/127 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ Sbjct 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAIN RFERIFGRP Sbjct 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINMRFERIFGRP 120 Query 121 LIGDGAN 127 LIGDGAN Sbjct 121 LIGDGAN 127 >gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175442|gb|ACC40552.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1386 Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 76/122 (63%), Positives = 91/122 (75%), Gaps = 0/122 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MSFV VAPE++A AASDL +GST++ AN AA TT +LAAGADEVSA IA+LFG H Sbjct 1 MSFVGVAPEMVAVAASDLERLGSTISAANVAAAGSTTTILAAGADEVSAVIAALFGTHAL 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+S Q+S FH QF+Q LT GAY+AAE VNV Q+VEQDLL +NA + +FGRP Sbjct 61 EYQAISTQLSVFHEQFVQTLTNGVGAYSAAELVNVLPLQNVEQDLLNLVNAPTQALFGRP 120 Query 121 LI 122 LI Sbjct 121 LI 122 >gi|340626105|ref|YP_004744557.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004295|emb|CCC43436.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=856 Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 99/127 (78%), Positives = 108/127 (86%), Gaps = 0/127 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MSFV+ APE L A ASDLAGIGS LA+ANAA LAPTT +LAAGADEVS+AIA+LFGAHGQ Sbjct 1 MSFVIAAPEALVAVASDLAGIGSALAEANAAVLAPTTGLLAAGADEVSSAIAALFGAHGQ 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 AYQ VSAQ SAFHAQF+QALTG GGAYAAAEA NVSAAQSV+Q LL IN + + GRP Sbjct 61 AYQTVSAQASAFHAQFVQALTGGGGAYAAAEAANVSAAQSVDQRLLDLINGPTQALLGRP 120 Query 121 LIGDGAN 127 LIGDGAN Sbjct 121 LIGDGAN 127 >gi|339296212|gb|AEJ48323.1| hypothetical protein CCDC5079_3134 [Mycobacterium tuberculosis CCDC5079] Length=731 Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 127/192 (67%), Positives = 147/192 (77%), Gaps = 7/192 (3%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MSFV+ PE+LAAAA+DLAGI S ++ A AAA APT V AAGADEVS AI++LFG H Q Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 AYQA+SAQ + FH QF+QALT G YAAAE + +VEQ +L AINA + +FGRP Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAE------SHTVEQMVLNAINAPTQTLFGRP 114 Query 121 LIGDGANG-GPGQDGGPGGLLYGNGGNGGTSTTVGMAGGNGGAAGLIGNGGFGGGGGPGA 179 LIGDGANG DG GGLL+GNGGNG T TT G+AGGNGG+AGLIGNGG GGGGG GA Sbjct 115 LIGDGANGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGA 174 Query 180 AGGNGGAGGWLF 191 AGG+GG GGWL+ Sbjct 175 AGGSGGNGGWLY 186 >gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] gi|289437463|gb|EFD19956.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] Length=998 Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 74/130 (57%), Positives = 91/130 (70%), Gaps = 7/130 (5%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MSFV+ PE+L AA+DLA IGST+ AN AA A VL A ADEVS A+A+LFG H Q Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQ VSAQ++ FH +F+Q L+ +Y AAEAVN VEQ LLAA+NA + +FGRP Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113 Query 121 LIGDGANGGP 130 LIG+GA+G P Sbjct 114 LIGNGADGSP 123 >gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|253319014|gb|ACT23617.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|328457295|gb|AEB02718.1| hypothetical protein TBSG_00589 [Mycobacterium tuberculosis KZN 4207] gi|344218399|gb|AEM99029.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1303 Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 74/130 (57%), Positives = 91/130 (70%), Gaps = 7/130 (5%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MSFV+ PE+L AA+DLA IGST+ AN AA A VL A ADEVS A+A+LFG H Q Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQ VSAQ++ FH +F+Q L+ +Y AAEAVN VEQ LLAA+NA + +FGRP Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113 Query 121 LIGDGANGGP 130 LIG+GA+G P Sbjct 114 LIGNGADGSP 123 >gi|148824595|ref|YP_001289349.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148723122|gb|ABR07747.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] Length=731 Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 103/163 (64%), Positives = 121/163 (75%), Gaps = 7/163 (4%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MSFV+ PE+LAAAA+DLAGI S ++ A AAA APT V AAGADEVS AI++LFG H Q Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 AYQA+SAQ + FH QF+QALT G YAAAE + +VEQ +L AINA + +FGRP Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAE------SHTVEQMVLNAINAPTQTLFGRP 114 Query 121 LIGDGANG-GPGQDGGPGGLLYGNGGNGGTSTTVGMAGGNGGA 162 LIGDGANG DG GGLL+GNGGNG T TT G+AGGNGG+ Sbjct 115 LIGDGANGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGS 157 >gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M] gi|183175990|gb|ACC41100.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M] Length=2118 Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 76/133 (58%), Positives = 93/133 (70%), Gaps = 3/133 (2%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MS V V+PE++A AASDLA IGS+L ANAAA PTT VL+A ADEVS AIA+LFG H Sbjct 1 MSLVTVSPELVAGAASDLARIGSSLGAANAAAAGPTTTVLSAAADEVSVAIATLFGTHAA 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVN---VSAAQSVEQDLLAAINARFERIF 117 YQ++SA+M+AFH QF+Q LT G Y + EA N +SA Q EQ+ L AINA + Sbjct 61 EYQSLSARMAAFHEQFVQTLTSGAGIYVSTEATNASFISALQLAEQNALNAINAPTQSWL 120 Query 118 GRPLIGDGANGGP 130 GRPLIG+G + P Sbjct 121 GRPLIGNGVDATP 133 >gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobacterium tuberculosis CCDC5079] Length=1330 Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 68/122 (56%), Positives = 93/122 (77%), Gaps = 0/122 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MS V+V PE +AAAASD+A IGS++ AN+AA TT+VLAAGADEVSAAIA+LFG+H + Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+S Q++AFH +F Q L+ A G+Y +AEA N + ++E ++L A+NA + + GRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 121 LI 122 LI Sbjct 122 LI 123 >gi|339631519|ref|YP_004723161.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339330875|emb|CCC26546.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=805 Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 68/122 (56%), Positives = 93/122 (77%), Gaps = 0/122 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MS V+V PE +AAAASD+A IGS++ AN+AA TT+VLAAGADEVSAAIA+LFG+H + Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+S Q++AFH +F Q L+ A G+Y +AEA N + ++E ++L A+NA + + GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 121 LI 122 LI Sbjct 121 LI 122 >gi|57117101|ref|YP_177968.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|253800434|ref|YP_003033435.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|7441235|pir||C70974 hypothetical glycine-rich protein Rv3388 - Mycobacterium tuberculosis (strain H37RV) gi|38490366|emb|CAE55593.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|253321937|gb|ACT26540.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|328460166|gb|AEB05589.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] gi|344221227|gb|AEN01858.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=731 Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 103/163 (64%), Positives = 121/163 (75%), Gaps = 7/163 (4%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MSFV+ PE+LAAAA+DLAGI S ++ A AAA APT V AAGADEVS AI++LFG H Q Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 AYQA+SAQ + FH QF+QALT G YAAAE + +VEQ +L AINA + +FGRP Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAE------SHTVEQMVLNAINAPTQTLFGRP 114 Query 121 LIGDGANG-GPGQDGGPGGLLYGNGGNGGTSTTVGMAGGNGGA 162 LIGDGANG DG GGLL+GNGGNG T TT G+AGGNGG+ Sbjct 115 LIGDGANGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGS 157 >gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989855|ref|YP_002644542.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121493027|emb|CAL71498.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772968|dbj|BAH25774.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601399|emb|CCC64072.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=1399 Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 68/122 (56%), Positives = 93/122 (77%), Gaps = 0/122 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MS V+VAPE +AAAA D+A IGS++ AN+AA TT+VLAAGADEVSAAIA+LFG+H + Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+S Q++AFH +F Q L+ A G+Y +AEA N + ++E ++L A+NA + + GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 121 LI 122 LI Sbjct 121 LI 122 >gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339330873|emb|CCC26544.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=1389 Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 69/123 (57%), Positives = 94/123 (77%), Gaps = 0/123 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MS V+VAPE +AAAA D+A IGS++ AN+AA TT+VLAAGADEVSAAIA+LFG+H + Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+S Q++AFH +F Q L+ A G+Y +AEA N + ++E ++L A+NA + + GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 121 LIG 123 LIG Sbjct 121 LIG 123 >gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobacterium tuberculosis CCDC5180] Length=1330 Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 67/122 (55%), Positives = 93/122 (77%), Gaps = 0/122 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MS V+V PE +AAAASD+A IGS++ AN+AA TT+VLAAGAD+VSAAIA+LFG+H + Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADDVSAAIATLFGSHAR 61 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+S Q++AFH +F Q L+ A G+Y +AEA N + ++E ++L A+NA + + GRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 121 LI 122 LI Sbjct 122 LI 123 >gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31618234|emb|CAD96152.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=1408 Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 69/123 (57%), Positives = 94/123 (77%), Gaps = 0/123 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MS V+VAPE +AAAA D+A IGS++ AN+AA TT+VLAAGADEVSAAIA+LFG+H + Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+S Q++AFH +F Q L+ A G+Y +AEA N + ++E ++L A+NA + + GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 121 LIG 123 LIG Sbjct 121 LIG 123 >gi|183985312|ref|YP_001853603.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178638|gb|ACC43748.1| PE-PGRS family protein [Mycobacterium marinum M] Length=846 Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 72/130 (56%), Positives = 96/130 (74%), Gaps = 1/130 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAA-GADEVSAAIASLFGAHG 59 MS+V +PEVL AAA++++ IGS+L ANA+A APTTA+L+A GADEVSAA+ ++FG H Sbjct 1 MSYVFASPEVLNAAAAEVSTIGSSLQTANASAAAPTTALLSALGADEVSAAVTAMFGNHA 60 Query 60 QAYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGR 119 QAYQAVS Q + FH +F+ ALT AY++AEA + QS+ QDLL +NA + + GR Sbjct 61 QAYQAVSTQAAEFHDRFVAALTAGADAYSSAEASTAATLQSLPQDLLNVVNAPTQALLGR 120 Query 120 PLIGDGANGG 129 LIG+GANG Sbjct 121 ALIGNGANGA 130 >gi|31792646|ref|NP_855139.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31618236|emb|CAD96154.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=795 Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 69/123 (57%), Positives = 94/123 (77%), Gaps = 0/123 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MS V+VAPE +AAAA D+A IGS++ AN+AA TT+VLAAGADEVSAAIA+LFG+H + Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+S Q++AFH +F Q L+ A G+Y +AEA N + ++E ++L A+NA + + GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 121 LIG 123 LIG Sbjct 121 LIG 123 >gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174555|gb|ACC39665.1| PE-PGRS family protein [Mycobacterium marinum M] Length=946 Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 73/127 (58%), Positives = 91/127 (72%), Gaps = 4/127 (3%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 M+FV+VAPE++ AAASDLA IGS + AN A APT +LAAG DEVS AIASLF H Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQ++ A+M+AFH QF+ ALT GG Y++AEA AA + QDLL +NA + + GRP Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEA----AAATPLQDLLNVVNAPTQALLGRP 116 Query 121 LIGDGAN 127 LIGDGA+ Sbjct 117 LIGDGAD 123 >gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174556|gb|ACC39666.1| PE-PGRS family protein [Mycobacterium marinum M] Length=963 Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 73/127 (58%), Positives = 91/127 (72%), Gaps = 4/127 (3%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 M+FV+VAPE++ AAASDLA IGS + AN A APT +LAAG DEVS AIASLF H Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQ++ A+M+AFH QF+ ALT GG Y++AEA AA + QDLL +NA + + GRP Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEA----AAATPLQDLLNVVNAPTQALLGRP 116 Query 121 LIGDGAN 127 LIGDGA+ Sbjct 117 LIGDGAD 123 >gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175440|gb|ACC40550.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1397 Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 75/127 (60%), Positives = 92/127 (73%), Gaps = 6/127 (4%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MSFV V PE++ AAASDL+GI S +AQAN+ A A TT VL A ADEVSAAIA+LFG H Q Sbjct 1 MSFVSVTPEMVVAAASDLSGINSAIAQANSVAAAATTTVLPAAADEVSAAIAALFGTHAQ 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+SA+++AFH +F+Q+L G+Y AEA N EQ LL +NA + +FGRP Sbjct 61 QYQAISAELAAFHDRFVQSLNTGAGSYLRAEAAN------AEQGLLGLVNAPTQALFGRP 114 Query 121 LIGDGAN 127 LIGDGAN Sbjct 115 LIGDGAN 121 >gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174290|gb|ACC39400.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1425 Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 71/127 (56%), Positives = 87/127 (69%), Gaps = 6/127 (4%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MSF VV P++L AAA+DLA IG+ + + AA A TT +L A ADEVSAAIASLFG H Sbjct 1 MSFTVVEPQMLTAAAADLAKIGAAIDTVSTAAAASTTNLLPAAADEVSAAIASLFGTHAL 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 AYQA+ AQ + FH F+QAL+ A YAA E N VEQ+LL INA + +FGRP Sbjct 61 AYQAIGAQAATFHDGFVQALSRAASRYAATEVAN------VEQNLLGLINAPTQALFGRP 114 Query 121 LIGDGAN 127 LIG+GA+ Sbjct 115 LIGNGAD 121 >gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183176632|gb|ACC41742.1| PE-PGRS family protein [Mycobacterium marinum M] Length=965 Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 73/127 (58%), Positives = 90/127 (71%), Gaps = 4/127 (3%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 M+FV+VAPE++ AAASDLA IGS + AN A APT +LAAG DEVS AIASLF H Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQ + A+M+AFH QF+ ALT GG Y++AEA AA + QDLL +NA + + GRP Sbjct 61 DYQNLGARMTAFHDQFVAALTAGGGLYSSAEA----AAATPLQDLLNVVNAPTQALLGRP 116 Query 121 LIGDGAN 127 LIGDGA+ Sbjct 117 LIGDGAD 123 >gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004656|emb|CCC43800.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=1006 Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 68/123 (56%), Positives = 93/123 (76%), Gaps = 0/123 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MS V+V PE++AAAASD+A IGS AN+ A TT+VLAAGADEVSAAIA+LFG+H + Sbjct 1 MSLVIVTPELVAAAASDVARIGSGFGAANSTAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+S Q++AFH +F+Q L+ A G+Y +AEA N + ++E ++L A+NA + + GRP Sbjct 61 EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 121 LIG 123 LIG Sbjct 121 LIG 123 >gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340005694|emb|CCC44860.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=1660 Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 71/128 (56%), Positives = 90/128 (71%), Gaps = 4/128 (3%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MS+V+ PE++A AA DLA IGS ++ A+A A PTT V+AAGADEVSA IA+LF AH Q Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+SAQ +AFH QF+ LT A Y A E N +A ++V L A+NA + + GRP Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRAV----LGAVNAPTQTLLGRP 116 Query 121 LIGDGANG 128 LIGDGA+G Sbjct 117 LIGDGAHG 124 >gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531 [Mycobacterium tuberculosis KZN 1435] gi|253321004|gb|ACT25607.1| predicted protein [Mycobacterium tuberculosis KZN 1435] gi|328459249|gb|AEB04672.1| hypothetical protein TBSG_02543 [Mycobacterium tuberculosis KZN 4207] Length=1408 Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 70/123 (57%), Positives = 94/123 (77%), Gaps = 0/123 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MS V+V PE +AAAASD+A IGS++ ANAAA TT+VLAAGADEVSAAIA+LFG+H + Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+S Q++AFH +F Q L+ A G+Y +AEA N + ++E ++L A+NA + + GRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 121 LIG 123 LIG Sbjct 122 LIG 124 >gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13882294|gb|AAK46868.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=1665 Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/128 (56%), Positives = 89/128 (70%), Gaps = 4/128 (3%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MS+V+ PE++A AA DLA IGS ++ A+A A PTT V+AAGADEVSA IA+LF AH Q Sbjct 6 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 65 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+SAQ +AFH QF+ LT A Y A E N +A + V L A+NA + + GRP Sbjct 66 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVV----LGAVNAPTQTLLGRP 121 Query 121 LIGDGANG 128 LIGDGA+G Sbjct 122 LIGDGAHG 129 >gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|7441217|pir||E70917 hypothetical glycine-rich protein Rv1450c - Mycobacterium tuberculosis (strain H37RV) gi|38490271|emb|CAE55390.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] Length=1329 Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 69/122 (57%), Positives = 93/122 (77%), Gaps = 0/122 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MS V+VAPE +AAAA D+A IGS++ ANAAA TT+VLAAGADEVSAAIA+LFG+H + Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+S Q++AFH +F Q L+ A G+Y +AEA N + ++E ++L A+NA + + GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 121 LI 122 LI Sbjct 121 LI 122 >gi|57116996|ref|YP_177887.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148662325|ref|YP_001283848.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|7441223|pir||A70869 hypothetical glycine-rich protein Rv2490c - Mycobacterium tuberculosis (strain H37RV) gi|41353424|emb|CAE55496.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148506477|gb|ABQ74286.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=1660 Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/128 (56%), Positives = 89/128 (70%), Gaps = 4/128 (3%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MS+V+ PE++A AA DLA IGS ++ A+A A PTT V+AAGADEVSA IA+LF AH Q Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+SAQ +AFH QF+ LT A Y A E N +A + V L A+NA + + GRP Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVV----LGAVNAPTQTLLGRP 116 Query 121 LIGDGANG 128 LIGDGA+G Sbjct 117 LIGDGAHG 124 >gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339331872|emb|CCC27575.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=1657 Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/128 (56%), Positives = 89/128 (70%), Gaps = 4/128 (3%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MS+V+ PE++A AA DLA IGS ++ A+A A PTT V+AAGADEVSA IA+LF AH Q Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+SAQ +AFH QF+ LT A Y A E N +A + V L A+NA + + GRP Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVV----LGAVNAPTQTLLGRP 116 Query 121 LIGDGANG 128 LIGDGA+G Sbjct 117 LIGDGAHG 124 >gi|183984569|ref|YP_001852860.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183177895|gb|ACC43005.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1251 Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 68/111 (62%), Positives = 84/111 (76%), Gaps = 0/111 (0%) Query 17 DLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQAYQAVSAQMSAFHAQF 76 DL GIG L A AAA TT+++AA DEVS AIA+LF H Q+YQA+SAQM+AFH +F Sbjct 18 DLTGIGEALRAATAAAAPSTTSLVAAAGDEVSTAIATLFSEHAQSYQALSAQMAAFHDRF 77 Query 77 MQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRPLIGDGAN 127 M AL GA G+YA+AEA NV+ Q++EQDLL A+NA + +FGR LIGDGAN Sbjct 78 MNALAGASGSYASAEAANVTPLQTIEQDLLGAVNAPTQVLFGRGLIGDGAN 128 >gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1644 Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/128 (56%), Positives = 89/128 (70%), Gaps = 4/128 (3%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MS+V+ PE++A AA DLA IGS ++ A+A A PTT V+AAGADEVSA IA+LF AH Q Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+SAQ +AFH QF+ LT A Y A E N +A + V L A+NA + + GRP Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVV----LGAVNAPTQTLLGRP 116 Query 121 LIGDGANG 128 LIGDGA+G Sbjct 117 LIGDGAHG 124 >gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] gi|289438352|gb|EFD20845.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] Length=1323 Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/128 (56%), Positives = 89/128 (70%), Gaps = 4/128 (3%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MS+V+ PE++A AA DLA IGS ++ A+A A PTT V+AAGADEVSA IA+LF AH Q Sbjct 6 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 65 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+SAQ +AFH QF+ LT A Y A E N +A + V L A+NA + + GRP Sbjct 66 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVV----LGAVNAPTQTLLGRP 121 Query 121 LIGDGANG 128 LIGDGA+G Sbjct 122 LIGDGAHG 129 >gi|183981221|ref|YP_001849512.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174547|gb|ACC39657.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1610 Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 72/128 (57%), Positives = 90/128 (71%), Gaps = 4/128 (3%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 M +VV APE+L+ AASDLA IGS L ANAAA PT +VLAA ADEVS AIA LFG + + Sbjct 1 MGYVVAAPEILSVAASDLANIGSALQAANAAATTPTVSVLAAAADEVSEAIAELFGTYAR 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+SAQ + FHA+F+QA+ Y+A E N S Q+ LL A+NA+ E + GRP Sbjct 61 DYQAISAQAARFHAEFVQAVNADAEWYSATEVANASPLQT----LLGAVNAQTEAMIGRP 116 Query 121 LIGDGANG 128 LIG+GA+G Sbjct 117 LIGNGADG 124 >gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024 [Mycobacterium tuberculosis KZN 1435] gi|253319935|gb|ACT24538.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|328458200|gb|AEB03623.1| hypothetical protein TBSG_01494 [Mycobacterium tuberculosis KZN 4207] Length=1616 Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 71/128 (56%), Positives = 89/128 (70%), Gaps = 4/128 (3%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MS+V+ PE++A AA DLA IGS ++ A+A A PTT V+AAGADEVSA IA+LF AH Q Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+SAQ +AFH QF+ LT A Y A E N +A + V L A+NA + + GRP Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVV----LGAVNAPTQTLLGRP 116 Query 121 LIGDGANG 128 LIGDGA+G Sbjct 117 LIGDGAHG 124 >gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13881112|gb|AAK45760.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=1408 Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/123 (57%), Positives = 94/123 (77%), Gaps = 0/123 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MS V+VAPE +AAAA D+A IGS++ ANAAA TT+VLAAGADEVSAAIA+LFG+H + Sbjct 2 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+S Q++AFH +F Q L+ A G+Y +AEA N + ++E ++L A+NA + + GRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 121 LIG 123 LIG Sbjct 122 LIG 124 >gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148721196|gb|ABR05821.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|344219280|gb|AEM99910.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1407 Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/123 (57%), Positives = 94/123 (77%), Gaps = 0/123 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MS V+VAPE +AAAA D+A IGS++ ANAAA TT+VLAAGADEVSAAIA+LFG+H + Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+S Q++AFH +F Q L+ A G+Y +AEA N + ++E ++L A+NA + + GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 121 LIG 123 LIG Sbjct 121 LIG 123 >gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148505394|gb|ABQ73203.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=1398 Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 70/123 (57%), Positives = 94/123 (77%), Gaps = 0/123 (0%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MS V+VAPE +AAAA D+A IGS++ ANAAA TT+VLAAGADEVSAAIA+LFG+H + Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQA+S Q++AFH +F Q L+ A G+Y +AEA N + ++E ++L A+NA + + GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 121 LIG 123 LIG Sbjct 121 LIG 123 >gi|121636496|ref|YP_976719.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121492143|emb|CAL70608.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] Length=1303 Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 75/130 (58%), Positives = 92/130 (71%), Gaps = 7/130 (5%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MSFV+ PE+L AA+DLA IGST+ AN AA A VL A ADEVS A+A+LFG H Q Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQ VSAQ++ FH +F+Q L+ A +Y AAEAVN VEQ LLAA+NA + +FGRP Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113 Query 121 LIGDGANGGP 130 LIG+GA+G P Sbjct 114 LIGNGADGSP 123 >gi|15839979|ref|NP_335016.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13880121|gb|AAK44830.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=1306 Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 75/130 (58%), Positives = 92/130 (71%), Gaps = 7/130 (5%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MSFV+ PE+L AA+DLA IGST+ AN AA A VL A ADEVS A+A+LFG H Q Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQ VSAQ++ FH +F+Q L+ A +Y AAEAVN VEQ LLAA+NA + +FGRP Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113 Query 121 LIGDGANGGP 130 LIG+GA+G P Sbjct 114 LIGNGADGSP 123 >gi|148660347|ref|YP_001281870.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148504499|gb|ABQ72308.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=1306 Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 75/130 (58%), Positives = 92/130 (71%), Gaps = 7/130 (5%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MSFV+ PE+L AA+DLA IGST+ AN AA A VL A ADEVS A+A+LFG H Q Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQ VSAQ++ FH +F+Q L+ A +Y AAEAVN VEQ LLAA+NA + +FGRP Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113 Query 121 LIGDGANGGP 130 LIG+GA+G P Sbjct 114 LIGNGADGSP 123 >gi|31791760|ref|NP_854253.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31617347|emb|CAD93455.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=1306 Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 75/130 (58%), Positives = 92/130 (71%), Gaps = 7/130 (5%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MSFV+ PE+L AA+DLA IGST+ AN AA A VL A ADEVS A+A+LFG H Q Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQ VSAQ++ FH +F+Q L+ A +Y AAEAVN VEQ LLAA+NA + +FGRP Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113 Query 121 LIGDGANGGP 130 LIG+GA+G P Sbjct 114 LIGNGADGSP 123 >gi|57116755|ref|YP_177739.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148821780|ref|YP_001286533.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|224988968|ref|YP_002643655.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] 7 more sequence titles Length=1306 Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 75/130 (58%), Positives = 92/130 (71%), Gaps = 7/130 (5%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 MSFV+ PE+L AA+DLA IGST+ AN AA A VL A ADEVS A+A+LFG H Q Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQ VSAQ++ FH +F+Q L+ A +Y AAEAVN VEQ LLAA+NA + +FGRP Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113 Query 121 LIGDGANGGP 130 LIG+GA+G P Sbjct 114 LIGNGADGSP 123 >gi|183983104|ref|YP_001851395.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183176430|gb|ACC41540.1| PE-PGRS family protein [Mycobacterium marinum M] Length=783 Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 66/128 (52%), Positives = 92/128 (72%), Gaps = 4/128 (3%) Query 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60 M ++ VAP+ LAAAA++L +GS ++ NAAA PTTA+ A ADEVSAAIA+LF +H Q Sbjct 1 MWYLSVAPDELAAAATELRDVGSIVSTVNAAAAVPTTALWPAAADEVSAAIAALFSSHAQ 60 Query 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQDLLAAINARFERIFGRP 120 YQ++S Q++A+H QF++AL G +Y+ AEA ++A +EQ LL IN + + GRP Sbjct 61 QYQSLSVQVAAYHDQFVRALAAGGASYSLAEA---ASASPLEQ-LLDLINLPSQTLLGRP 116 Query 121 LIGDGANG 128 LIGDGA+G Sbjct 117 LIGDGADG 124 Lambda K H 0.309 0.144 0.450 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1835886110556 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40