BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1102c
Length=103
Score E
Sequences producing significant alignments: (Bits) Value
gi|308370063|ref|ZP_07420166.2| toxin [Mycobacterium tuberculosi... 208 3e-52
gi|15608242|ref|NP_215618.1| hypothetical protein Rv1102c [Mycob... 207 4e-52
gi|31792295|ref|NP_854788.1| hypothetical protein Mb1132c [Mycob... 205 1e-51
gi|333989865|ref|YP_004522479.1| hypothetical protein JDM601_122... 183 9e-45
gi|284030849|ref|YP_003380780.1| transcriptional modulator of Ma... 144 6e-33
gi|111025169|ref|YP_707589.1| growth inhibitor PemK [Rhodococcus... 137 4e-31
gi|77454742|ref|YP_345610.1| hypothetical protein pREL1_0175 [Rh... 106 1e-21
gi|229489924|ref|ZP_04383778.1| conserved hypothetical protein [... 104 4e-21
gi|33867143|ref|NP_898701.1| PemK-like growth inhibitor [Rhodoco... 103 1e-20
gi|317125701|ref|YP_004099813.1| PemK family protein [Intraspora... 99.4 1e-19
gi|94266554|ref|ZP_01290240.1| PemK-like protein [delta proteoba... 66.6 1e-09
gi|297568724|ref|YP_003690068.1| transcriptional modulator of Ma... 63.5 9e-09
gi|333992022|ref|YP_004524636.1| PemK-like protein [Mycobacteriu... 55.1 4e-06
gi|108802468|ref|YP_642664.1| transcriptional modulator of MazE/... 53.5 1e-05
gi|17227833|ref|NP_484381.1| hypothetical protein all0337 [Nosto... 48.5 3e-04
gi|308369568|ref|ZP_07418288.2| toxin [Mycobacterium tuberculosi... 47.8 5e-04
gi|15841413|ref|NP_336450.1| hypothetical protein MT1992 [Mycoba... 47.8 5e-04
gi|15609079|ref|NP_216458.1| hypothetical protein Rv1942c [Mycob... 47.8 5e-04
gi|300725216|ref|YP_003714544.1| MazF protein [Xenorhabdus nemat... 47.8 6e-04
gi|323719559|gb|EGB28684.1| toxin protein [Mycobacterium tubercu... 47.4 8e-04
gi|298530125|ref|ZP_07017527.1| transcriptional modulator of Maz... 46.6 0.001
gi|293392174|ref|ZP_06636508.1| transcriptional modulator of Maz... 45.8 0.002
gi|333998270|ref|YP_004530882.1| hypothetical protein TREPR_2171... 45.4 0.003
gi|261867598|ref|YP_003255520.1| transcriptional modulator of Ma... 45.4 0.003
gi|339443703|ref|YP_004709707.1| hypothetical protein EGYY_00230... 45.4 0.003
gi|153800491|ref|ZP_01955077.1| putative MazF protein [Vibrio ch... 45.1 0.003
gi|262191608|ref|ZP_06049787.1| programmed cell death toxin MazF... 44.7 0.005
gi|153216787|ref|ZP_01950611.1| transcriptional modulator of Maz... 44.7 0.005
gi|54309832|ref|YP_130852.1| putative MazF protein [Photobacteri... 44.3 0.006
gi|284991043|ref|YP_003409597.1| transcriptional modulator of Ma... 44.3 0.006
gi|297580119|ref|ZP_06942046.1| conserved hypothetical protein [... 43.9 0.008
gi|153971551|ref|YP_001393091.1| growth inhibitor [Vibrio vulnif... 43.1 0.012
gi|120536932|ref|YP_956990.1| transcriptional modulator of MazE/... 42.7 0.019
gi|84497663|ref|ZP_00996485.1| phosphoribosylformylglycinamidine... 42.0 0.029
gi|15607799|ref|NP_215173.1| hypothetical protein Rv0659c [Mycob... 41.6 0.040
gi|119357199|ref|YP_911843.1| transcriptional modulator of MazE/... 41.6 0.041
gi|291542825|emb|CBL15935.1| Growth inhibitor [Ruminococcus brom... 41.2 0.046
gi|167044217|gb|ABZ08898.1| putative PemK-like protein [uncultur... 40.8 0.063
gi|153869667|ref|ZP_01999211.1| conserved hypothetical protein [... 40.8 0.071
gi|189499698|ref|YP_001959168.1| transcriptional modulator of Ma... 40.4 0.076
gi|308379835|ref|ZP_07487770.2| toxin [Mycobacterium tuberculosi... 40.4 0.083
gi|166365013|ref|YP_001657286.1| PemK family protein [Microcysti... 40.0 0.12
gi|295090171|emb|CBK76278.1| Growth inhibitor [Clostridium cf. s... 39.7 0.14
gi|254885287|ref|ZP_05257997.1| PemK family protein [Bacteroides... 39.3 0.19
gi|345456848|gb|EET18389.2| PemK family protein [Bacteroides sp.... 39.3 0.20
gi|24376269|ref|NP_720377.1| mRNA endonuclease-like protein PemK... 39.3 0.20
gi|189460996|ref|ZP_03009781.1| hypothetical protein BACCOP_0164... 39.3 0.21
gi|154504833|ref|ZP_02041571.1| hypothetical protein RUMGNA_0234... 39.3 0.21
gi|21673827|ref|NP_661892.1| hypothetical protein CT0999 [Chloro... 39.3 0.21
gi|153869986|ref|ZP_01999479.1| PemK-like protein [Beggiatoa sp.... 38.9 0.24
>gi|308370063|ref|ZP_07420166.2| toxin [Mycobacterium tuberculosis SUMu002]
gi|308373036|ref|ZP_07430806.2| toxin [Mycobacterium tuberculosis SUMu005]
gi|308325465|gb|EFP14316.1| toxin [Mycobacterium tuberculosis SUMu002]
gi|308338998|gb|EFP27849.1| toxin [Mycobacterium tuberculosis SUMu005]
Length=104
Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/103 (100%), Positives = 103/103 (100%), Gaps = 0/103 (0%)
Query 1 MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV 60
MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV
Sbjct 2 MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV 61
Query 61 SCDNTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFDLDWVVA 103
SCDNTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFDLDWVVA
Sbjct 62 SCDNTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFDLDWVVA 104
>gi|15608242|ref|NP_215618.1| hypothetical protein Rv1102c [Mycobacterium tuberculosis H37Rv]
gi|15840541|ref|NP_335578.1| hypothetical protein MT1134 [Mycobacterium tuberculosis CDC1551]
gi|148660888|ref|YP_001282411.1| hypothetical protein MRA_1113 [Mycobacterium tuberculosis H37Ra]
44 more sequence titles
Length=103
Score = 207 bits (527), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/103 (100%), Positives = 103/103 (100%), Gaps = 0/103 (0%)
Query 1 MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV 60
MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV
Sbjct 1 MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV 60
Query 61 SCDNTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFDLDWVVA 103
SCDNTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFDLDWVVA
Sbjct 61 SCDNTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFDLDWVVA 103
>gi|31792295|ref|NP_854788.1| hypothetical protein Mb1132c [Mycobacterium bovis AF2122/97]
gi|121637033|ref|YP_977256.1| hypothetical protein BCG_1162c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224989506|ref|YP_002644193.1| hypothetical protein JTY_1135 [Mycobacterium bovis BCG str. Tokyo
172]
27 more sequence titles
Length=103
Score = 205 bits (522), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/103 (99%), Positives = 102/103 (99%), Gaps = 0/103 (0%)
Query 1 MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV 60
MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV
Sbjct 1 MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV 60
Query 61 SCDNTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFDLDWVVA 103
SCDN QTIPVCDLGRQIGYLLASQEPALAEAIGNAFDLDWVVA
Sbjct 61 SCDNIQTIPVCDLGRQIGYLLASQEPALAEAIGNAFDLDWVVA 103
>gi|333989865|ref|YP_004522479.1| hypothetical protein JDM601_1225 [Mycobacterium sp. JDM601]
gi|333485833|gb|AEF35225.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=103
Score = 183 bits (464), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 88/103 (86%), Positives = 93/103 (91%), Gaps = 0/103 (0%)
Query 1 MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV 60
MRPIHIAQLD+ARPVLILT EVVRPHLTNVTVAPITTTVRGL+TE PV A NGLNQPSVV
Sbjct 1 MRPIHIAQLDRARPVLILTHEVVRPHLTNVTVAPITTTVRGLSTEFPVGAANGLNQPSVV 60
Query 61 SCDNTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFDLDWVVA 103
SCDN QT+PV DLGRQIGYL SQEPALA+AIGNAFDLDW +
Sbjct 61 SCDNIQTVPVADLGRQIGYLFDSQEPALADAIGNAFDLDWATS 103
>gi|284030849|ref|YP_003380780.1| transcriptional modulator of MazE/toxin, MazF [Kribbella flavida
DSM 17836]
gi|283810142|gb|ADB31981.1| transcriptional modulator of MazE/toxin, MazF [Kribbella flavida
DSM 17836]
Length=101
Score = 144 bits (362), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 81/100 (81%), Gaps = 0/100 (0%)
Query 1 MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV 60
MRPIHIA+LDK RPV++LTRE++RP LTNVTVAPIT+TVRGL+TEV V NGL+ PS +
Sbjct 1 MRPIHIARLDKPRPVVVLTRELIRPRLTNVTVAPITSTVRGLSTEVLVGPQNGLDHPSAI 60
Query 61 SCDNTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFDLDW 100
SCDN QTIP LGR IGYLL QEPAL EA+ AFDLD
Sbjct 61 SCDNIQTIPKLQLGRLIGYLLPDQEPALTEAVTLAFDLDL 100
>gi|111025169|ref|YP_707589.1| growth inhibitor PemK [Rhodococcus jostii RHA1]
gi|110824148|gb|ABG99431.1| probable growth inhibitor PemK [Rhodococcus jostii RHA1]
Length=99
Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/99 (69%), Positives = 77/99 (78%), Gaps = 0/99 (0%)
Query 1 MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV 60
MRPIH A+LDK RPVL+LTRE+VRPHL+ VTVAPIT TVRGL+TEVPV NGL + SVV
Sbjct 1 MRPIHAAKLDKTRPVLVLTRELVRPHLSRVTVAPITGTVRGLSTEVPVGPANGLEKESVV 60
Query 61 SCDNTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFDLD 99
SCDN TIPV LGR +G+ SQE AL AI AFDL+
Sbjct 61 SCDNIVTIPVSALGRGLGFFFPSQEAALTTAIRAAFDLE 99
>gi|77454742|ref|YP_345610.1| hypothetical protein pREL1_0175 [Rhodococcus erythropolis PR4]
gi|77019742|dbj|BAE46118.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=100
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/99 (55%), Positives = 67/99 (68%), Gaps = 0/99 (0%)
Query 1 MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV 60
MRPIH AQ + PVL+LTRE+VRPHL VTVAPI +T RGL+TE+ + NG+ SVV
Sbjct 1 MRPIHDAQFETVHPVLVLTRELVRPHLETVTVAPIHSTGRGLSTELSLGESNGVEDGSVV 60
Query 61 SCDNTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFDLD 99
CD TIP LG G+LL QE L +A+ +AFDL+
Sbjct 61 DCDAITTIPASALGANRGFLLPVQEVQLTKALRSAFDLE 99
>gi|229489924|ref|ZP_04383778.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229323181|gb|EEN88948.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=100
Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/99 (55%), Positives = 67/99 (68%), Gaps = 0/99 (0%)
Query 1 MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV 60
MRPIH AQL PVL+LTRE+VRPHL VTVAPI + RGL+TE+ + NG+ SV
Sbjct 1 MRPIHEAQLGDLCPVLVLTRELVRPHLGTVTVAPIRSKGRGLSTELSLGEGNGVEDGSVA 60
Query 61 SCDNTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFDLD 99
CD TIPV LG G+LL +QE L+ A+ +AFDL+
Sbjct 61 DCDGVTTIPVSALGANRGFLLPAQEVLLSRALRSAFDLE 99
>gi|33867143|ref|NP_898701.1| PemK-like growth inhibitor [Rhodococcus erythropolis]
gi|33668977|gb|AAP73971.1| PemK-like growth inhibitor [Rhodococcus erythropolis]
Length=100
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/99 (55%), Positives = 67/99 (68%), Gaps = 0/99 (0%)
Query 1 MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV 60
MRPIH AQL PVL+LTRE+VRPHL VTVAPI + RGL+TE+ + NG+ SVV
Sbjct 1 MRPIHDAQLGGLCPVLVLTRELVRPHLGTVTVAPIRSEGRGLSTELSLGEGNGVEDGSVV 60
Query 61 SCDNTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFDLD 99
CD TIPV LG G+LL +QE L+ + +AFDL+
Sbjct 61 DCDGVTTIPVSALGVNRGFLLPAQEVLLSRVLRSAFDLE 99
>gi|317125701|ref|YP_004099813.1| PemK family protein [Intrasporangium calvum DSM 43043]
gi|315589789|gb|ADU49086.1| PemK family protein [Intrasporangium calvum DSM 43043]
Length=104
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 68/100 (68%), Gaps = 0/100 (0%)
Query 1 MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV 60
MR I + +LD+ RP L+LTRE R +T VTVAPITTTV+GL++EV V NGL+ V
Sbjct 1 MREICLVRLDQTRPALVLTREAARGAMTKVTVAPITTTVKGLSSEVRVGPDNGLDHECAV 60
Query 61 SCDNTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFDLDW 100
+ DN T+PV LGR IG+L A QE LA A+ A+DL+
Sbjct 61 ALDNVVTVPVELLGRTIGFLKAEQEVELARALVLAYDLEL 100
>gi|94266554|ref|ZP_01290240.1| PemK-like protein [delta proteobacterium MLMS-1]
gi|93452829|gb|EAT03355.1| PemK-like protein [delta proteobacterium MLMS-1]
Length=103
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/98 (38%), Positives = 57/98 (59%), Gaps = 0/98 (0%)
Query 1 MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV 60
+R + DK RPVLIL+R+ + +L VTVAPIT T+R + +EV + +GL + V
Sbjct 6 VRWYKFGRPDKKRPVLILSRDSIIEYLGEVTVAPITGTIRDIPSEVLLSRADGLPKECAV 65
Query 61 SCDNTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFDL 98
+CD+ QT+ LG ++ L A + + AI A D+
Sbjct 66 NCDHLQTVTKSKLGSRLATLPAVRMQEVGRAIHFALDI 103
>gi|297568724|ref|YP_003690068.1| transcriptional modulator of MazE/toxin, MazF [Desulfurivibrio
alkaliphilus AHT2]
gi|296924639|gb|ADH85449.1| transcriptional modulator of MazE/toxin, MazF [Desulfurivibrio
alkaliphilus AHT2]
Length=104
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/99 (41%), Positives = 59/99 (60%), Gaps = 1/99 (1%)
Query 1 MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVN-GLNQPSV 59
+R A DK RPVLILTR+ V +L VT+APITTTVR + +EV + AVN G+ +
Sbjct 6 IRWYKFAAPDKKRPVLILTRDSVLEYLGEVTIAPITTTVRDIPSEVFLSAVNDGVPRDCA 65
Query 60 VSCDNTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFDL 98
++CD+ QT+ +G + L ++ + AI A D+
Sbjct 66 LNCDHLQTVSKGKIGPLVTSLPRNKMLEVGRAIRFALDI 104
>gi|333992022|ref|YP_004524636.1| PemK-like protein [Mycobacterium sp. JDM601]
gi|333487990|gb|AEF37382.1| PemK-like protein [Mycobacterium sp. JDM601]
Length=103
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/71 (43%), Positives = 42/71 (60%), Gaps = 0/71 (0%)
Query 10 DKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVVSCDNTQTIP 69
DK RPVL+LTR+ LT++ VAP+TTTVR + TEV +D +GL + + DN T+
Sbjct 15 DKIRPVLVLTRQRFTSRLTSLLVAPVTTTVRNIPTEVALDRADGLPRQCAANFDNVFTLG 74
Query 70 VCDLGRQIGYL 80
+I L
Sbjct 75 RSRFTSRIARL 85
>gi|108802468|ref|YP_642664.1| transcriptional modulator of MazE/toxin, MazF [Mycobacterium
sp. MCS]
gi|119855295|ref|YP_935898.1| transcriptional modulator of MazE/toxin, MazF [Mycobacterium
sp. KMS]
gi|108772887|gb|ABG11608.1| transcriptional modulator of MazE/toxin, MazF [Mycobacterium
sp. MCS]
gi|119698012|gb|ABL95083.1| transcriptional modulator of MazE/toxin, MazF [Mycobacterium
sp. KMS]
Length=107
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/71 (47%), Positives = 47/71 (67%), Gaps = 5/71 (7%)
Query 13 RPVLILTREVVRPHLTNVTVAPITTTVRGLATEV---PVDAVNGLNQPSVVSCDNTQTIP 69
RPV++L+R+V P L V VAP TTTVRGLA+EV P D + + Q + V+ D +++P
Sbjct 20 RPVVVLSRDVAIPRLRRVLVAPCTTTVRGLASEVVLTPGD--DPVPQRAAVNLDLVESVP 77
Query 70 VCDLGRQIGYL 80
V LG ++G L
Sbjct 78 VAALGTRLGRL 88
>gi|17227833|ref|NP_484381.1| hypothetical protein all0337 [Nostoc sp. PCC 7120]
gi|17129682|dbj|BAB72295.1| all0337 [Nostoc sp. PCC 7120]
Length=121
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/92 (40%), Positives = 48/92 (53%), Gaps = 2/92 (2%)
Query 11 KARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVVSCDNTQTIPV 70
KARPV+I++R + P V PITT RG A EV + ++ L Q SV + +IP
Sbjct 18 KARPVVIVSRYDLTPPRALVIYIPITTQNRGSAYEVELPVLSFLRQGSVANVQGLGSIPS 77
Query 71 CDLGRQIGYLLASQEPALAEAIGNAFDLDWVV 102
L R++G L S+E L F LD VV
Sbjct 78 VRLERKLGEL--SKETMLEIKQALMFTLDLVV 107
>gi|308369568|ref|ZP_07418288.2| toxin [Mycobacterium tuberculosis SUMu002]
gi|308370871|ref|ZP_07423023.2| toxin [Mycobacterium tuberculosis SUMu003]
gi|308402959|ref|ZP_07493677.2| toxin [Mycobacterium tuberculosis SUMu012]
gi|308327162|gb|EFP16013.1| toxin [Mycobacterium tuberculosis SUMu002]
gi|308330598|gb|EFP19449.1| toxin [Mycobacterium tuberculosis SUMu003]
gi|308365868|gb|EFP54719.1| toxin [Mycobacterium tuberculosis SUMu012]
Length=100
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/94 (33%), Positives = 56/94 (60%), Gaps = 2/94 (2%)
Query 5 HIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVD-AVNGLNQPSVVSCD 63
+A++ + RPV++L+R+ P L VAP TTT+RGLA+EV ++ + + + S V+ D
Sbjct 5 EMAEIGR-RPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLD 63
Query 64 NTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFD 97
+ +++ V L ++G L + A+ A+ A D
Sbjct 64 SVESVSVAVLVNRLGRLADIRMRAICTALEVAVD 97
>gi|15841413|ref|NP_336450.1| hypothetical protein MT1992 [Mycobacterium tuberculosis CDC1551]
gi|254232113|ref|ZP_04925440.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|13881650|gb|AAK46264.1| hypothetical protein MT1992 [Mycobacterium tuberculosis CDC1551]
gi|124601172|gb|EAY60182.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
Length=117
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/94 (33%), Positives = 56/94 (60%), Gaps = 2/94 (2%)
Query 5 HIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVD-AVNGLNQPSVVSCD 63
+A++ + RPV++L+R+ P L VAP TTT+RGLA+EV ++ + + + S V+ D
Sbjct 22 EMAEIGR-RPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLD 80
Query 64 NTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFD 97
+ +++ V L ++G L + A+ A+ A D
Sbjct 81 SVESVSVAVLVNRLGRLADIRMRAICTALEVAVD 114
>gi|15609079|ref|NP_216458.1| hypothetical protein Rv1942c [Mycobacterium tuberculosis H37Rv]
gi|31793134|ref|NP_855627.1| hypothetical protein Mb1977c [Mycobacterium bovis AF2122/97]
gi|121637847|ref|YP_978070.1| hypothetical protein BCG_1981c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
67 more sequence titles
Length=109
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/94 (33%), Positives = 56/94 (60%), Gaps = 2/94 (2%)
Query 5 HIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVD-AVNGLNQPSVVSCD 63
+A++ + RPV++L+R+ P L VAP TTT+RGLA+EV ++ + + + S V+ D
Sbjct 14 EMAEIGR-RPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLD 72
Query 64 NTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFD 97
+ +++ V L ++G L + A+ A+ A D
Sbjct 73 SVESVSVAVLVNRLGRLADIRMRAICTALEVAVD 106
>gi|300725216|ref|YP_003714544.1| MazF protein [Xenorhabdus nematophila ATCC 19061]
gi|297631761|emb|CBJ92480.1| putative MazF protein [Xenorhabdus nematophila ATCC 19061]
Length=124
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/68 (37%), Positives = 38/68 (56%), Gaps = 3/68 (4%)
Query 1 MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV 60
P+ ++ K RP L+L+ E V + PI+T++RG TEVP +N L +PSVV
Sbjct 16 FEPVKGKEIGKVRPALVLSSEEYNKKTGLVIICPISTSIRGGETEVP---INNLEKPSVV 72
Query 61 SCDNTQTI 68
+ QT+
Sbjct 73 TASLIQTL 80
>gi|323719559|gb|EGB28684.1| toxin protein [Mycobacterium tuberculosis CDC1551A]
Length=95
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/86 (35%), Positives = 51/86 (60%), Gaps = 1/86 (1%)
Query 13 RPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVD-AVNGLNQPSVVSCDNTQTIPVC 71
RPV++L+R+ P L VAP TTT+RGLA+EV ++ + + + S V+ D+ +++ V
Sbjct 7 RPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLDSVESVSVA 66
Query 72 DLGRQIGYLLASQEPALAEAIGNAFD 97
L ++G L + A+ A+ A D
Sbjct 67 VLVNRLGRLADIRMRAICTALEVAVD 92
>gi|298530125|ref|ZP_07017527.1| transcriptional modulator of MazE/toxin, MazF [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509499|gb|EFI33403.1| transcriptional modulator of MazE/toxin, MazF [Desulfonatronospira
thiodismutans ASO3-1]
Length=108
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (33%), Positives = 45/87 (52%), Gaps = 1/87 (1%)
Query 13 RPVLILTREVV-RPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVVSCDNTQTIPVC 71
R ++++R+V+ + AP+ + GL+T+VPV NGL S + CD +IP
Sbjct 21 RVFVVVSRQVLLDSRFSTAICAPVYSACHGLSTQVPVGIENGLKHESSIHCDELVSIPKR 80
Query 72 DLGRQIGYLLASQEPALAEAIGNAFDL 98
L IG L +Q L +A+ A +L
Sbjct 81 MLSDFIGSLSPTQMNKLDQALAIALEL 107
>gi|293392174|ref|ZP_06636508.1| transcriptional modulator of MazE/toxin, MazF [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290952708|gb|EFE02827.1| transcriptional modulator of MazE/toxin, MazF [Aggregatibacter
actinomycetemcomitans D7S-1]
Length=114
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/68 (34%), Positives = 37/68 (55%), Gaps = 3/68 (4%)
Query 1 MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV 60
P ++ K RP +L+ E+ + PI+T++RG TEVP++ GL+ PSVV
Sbjct 14 FEPTKGKEIGKYRPAFVLSHEIYNKSTGLIICCPISTSIRGAVTEVPIE---GLDSPSVV 70
Query 61 SCDNTQTI 68
+ QT+
Sbjct 71 ATTLVQTL 78
>gi|333998270|ref|YP_004530882.1| hypothetical protein TREPR_2171 [Treponema primitia ZAS-2]
gi|333741294|gb|AEF86784.1| conserved hypothetical protein [Treponema primitia ZAS-2]
Length=109
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/91 (28%), Positives = 46/91 (51%), Gaps = 1/91 (1%)
Query 11 KARPVLILTREV-VRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVVSCDNTQTIP 69
K R +I++R++ + + VT AP+ + ++T+V + GL S + CD +IP
Sbjct 19 KYRVFVIVSRQILIDSKFSTVTCAPVYSNYDSISTQVQIGIEEGLKHKSSIHCDELISIP 78
Query 70 VCDLGRQIGYLLASQEPALAEAIGNAFDLDW 100
L IG L + L EA+ A ++++
Sbjct 79 KTLLTNYIGILSEEKLFELKEALTIALEIEY 109
>gi|261867598|ref|YP_003255520.1| transcriptional modulator of MazE/toxin, MazF [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412930|gb|ACX82301.1| transcriptional modulator of MazE/toxin, MazF [Aggregatibacter
actinomycetemcomitans D11S-1]
Length=114
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/68 (34%), Positives = 37/68 (55%), Gaps = 3/68 (4%)
Query 1 MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV 60
P ++ K RP +L+ E+ + PI+T++RG TEVP++ GL+ PSVV
Sbjct 14 FEPKKGKEIGKYRPAFVLSHEIYNKSTGLIICCPISTSIRGAVTEVPIE---GLDSPSVV 70
Query 61 SCDNTQTI 68
+ QT+
Sbjct 71 ATTLVQTL 78
>gi|339443703|ref|YP_004709707.1| hypothetical protein EGYY_00230 [Eggerthella sp. YY7918]
gi|338903455|dbj|BAK43306.1| hypothetical protein EGYY_00230 [Eggerthella sp. YY7918]
Length=170
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/86 (41%), Positives = 46/86 (54%), Gaps = 5/86 (5%)
Query 13 RPVLILTREVVRPHLTNVTVAPITTT-VRGLATEVPVDAVNGLNQPSVVSCDNTQTIPVC 71
RPVLI+ + V VA IT+ RGL T VPV AV GL + SVV + +TI
Sbjct 27 RPVLIVQNDAGNKRSRTVIVAAITSKPKRGLPTHVPVPAVAGLREKSVVLLEQLKTIDKA 86
Query 72 DLGRQIGYLLASQ----EPALAEAIG 93
L IG++ SQ + ALA ++G
Sbjct 87 RLRAYIGHMGQSQMEKVDSALAVSLG 112
>gi|153800491|ref|ZP_01955077.1| putative MazF protein [Vibrio cholerae MZO-3]
gi|124123935|gb|EAY42678.1| putative MazF protein [Vibrio cholerae MZO-3]
gi|340049338|gb|EGR10254.1| pemK-like family protein [Vibrio cholerae HE48]
Length=117
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (35%), Positives = 39/72 (55%), Gaps = 3/72 (4%)
Query 1 MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV 60
P+ ++ K RP L+L+ + + PI+T++RG A EVP VN L++PSVV
Sbjct 16 FEPVKGKEIGKYRPALVLSSKEYNQQTGLLICCPISTSIRGQALEVP---VNNLDKPSVV 72
Query 61 SCDNTQTIPVCD 72
+ QT+ D
Sbjct 73 AASLIQTLSWKD 84
>gi|262191608|ref|ZP_06049787.1| programmed cell death toxin MazF [Vibrio cholerae CT 5369-93]
gi|262032496|gb|EEY51055.1| programmed cell death toxin MazF [Vibrio cholerae CT 5369-93]
Length=117
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (36%), Positives = 39/70 (56%), Gaps = 3/70 (4%)
Query 3 PIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVVSC 62
P+ ++ K RP L+L+ + + PI+T++RG A EVP VN L++PSVV+
Sbjct 18 PVKGKEIGKYRPALVLSSKEYNQQTGLLICCPISTSIRGQALEVP---VNNLDKPSVVAA 74
Query 63 DNTQTIPVCD 72
QT+ D
Sbjct 75 SLIQTLSWKD 84
>gi|153216787|ref|ZP_01950611.1| transcriptional modulator of MazE/toxin, MazF [Vibrio cholerae
1587]
gi|153817009|ref|ZP_01969676.1| transcriptional modulator of MazE/toxin, MazF [Vibrio cholerae
NCTC 8457]
gi|124114121|gb|EAY32941.1| transcriptional modulator of MazE/toxin, MazF [Vibrio cholerae
1587]
gi|126512419|gb|EAZ75013.1| transcriptional modulator of MazE/toxin, MazF [Vibrio cholerae
NCTC 8457]
Length=117
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (36%), Positives = 39/70 (56%), Gaps = 3/70 (4%)
Query 3 PIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVVSC 62
P+ ++ K RP L+L+ + + PI+T++RG A EVP VN L++PSVV+
Sbjct 18 PVKGKEIGKYRPALVLSSKEYNQQTGLLICCPISTSIRGQALEVP---VNNLDKPSVVAA 74
Query 63 DNTQTIPVCD 72
QT+ D
Sbjct 75 SLIQTLSWKD 84
>gi|54309832|ref|YP_130852.1| putative MazF protein [Photobacterium profundum SS9]
gi|46914270|emb|CAG21050.1| putative MazF protein [Photobacterium profundum SS9]
Length=117
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/72 (34%), Positives = 38/72 (53%), Gaps = 3/72 (4%)
Query 1 MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV 60
P+ ++ K RP L+L+ + P++T++RG ATEVP +N L +PSVV
Sbjct 16 FEPVKGKEIGKYRPALVLSSYQYNKKTGLLICCPVSTSIRGGATEVP---INNLEKPSVV 72
Query 61 SCDNTQTIPVCD 72
+ QT+ D
Sbjct 73 TASLIQTLSWKD 84
>gi|284991043|ref|YP_003409597.1| transcriptional modulator of MazE/toxin, MazF [Geodermatophilus
obscurus DSM 43160]
gi|284064288|gb|ADB75226.1| transcriptional modulator of MazE/toxin, MazF [Geodermatophilus
obscurus DSM 43160]
Length=109
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/94 (31%), Positives = 55/94 (59%), Gaps = 2/94 (2%)
Query 5 HIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVD-AVNGLNQPSVVSCD 63
+A++ + RPV++L+R+ V P VAP TTT+RGL +EV ++ + + + VV+ D
Sbjct 14 EMAEIGR-RPVVVLSRDAVIPRHRRALVAPCTTTIRGLVSEVGLEPGEDPVPRRCVVNMD 72
Query 64 NTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFD 97
+ +++ V L ++G L ++ + A+ A D
Sbjct 73 SVESVSVAVLVERLGRLADTRMRQICGALAVAVD 106
>gi|297580119|ref|ZP_06942046.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297535765|gb|EFH74599.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length=117
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/70 (36%), Positives = 38/70 (55%), Gaps = 3/70 (4%)
Query 3 PIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVVSC 62
P+ ++ K RP L+L+ + PI+T++RG A EVP VN L++PSVV+
Sbjct 18 PVKGKEIGKYRPALVLSSREYNQQTGLLICCPISTSIRGQALEVP---VNNLDKPSVVAA 74
Query 63 DNTQTIPVCD 72
QT+ D
Sbjct 75 SLIQTLSWKD 84
>gi|153971551|ref|YP_001393091.1| growth inhibitor [Vibrio vulnificus]
gi|153971592|ref|YP_001393110.1| growth inhibitor [Vibrio vulnificus]
gi|152955073|emb|CAL25425.1| growth inhibitor [Vibrio vulnificus]
gi|152955093|emb|CAL25444.1| growth inhibitor [Vibrio vulnificus]
Length=117
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/72 (34%), Positives = 39/72 (55%), Gaps = 3/72 (4%)
Query 1 MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV 60
P+ ++ K RP L+L+ + + PI+T++RG ATEV +V L++PSVV
Sbjct 16 FEPVKGKEIGKYRPALVLSSKEYNQQTGLLICCPISTSIRGQATEV---SVKNLDKPSVV 72
Query 61 SCDNTQTIPVCD 72
+ QT+ D
Sbjct 73 ASSLIQTLSWKD 84
>gi|120536932|ref|YP_956990.1| transcriptional modulator of MazE/toxin, MazF [Marinobacter aquaeolei
VT8]
gi|120326766|gb|ABM21075.1| transcriptional modulator of MazE/toxin, MazF [Marinobacter aquaeolei
VT8]
Length=120
Score = 42.7 bits (99), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/90 (29%), Positives = 47/90 (53%), Gaps = 5/90 (5%)
Query 3 PIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVVSC 62
P ++ K RP L+L+ + + PI+T++RG ATEV AV+ L +PSVV+
Sbjct 18 PTKGKEIGKYRPALVLSSKQYNKQTGLMICCPISTSIRGTATEV---AVDNLEKPSVVAS 74
Query 63 DNTQTIPVCDLGRQIGYLLASQEPALAEAI 92
QT+ D R+ ++ ++ + + +
Sbjct 75 SLIQTLSWKD--RKANFITTAENGVMDQVL 102
>gi|84497663|ref|ZP_00996485.1| phosphoribosylformylglycinamidine synthase [Janibacter sp. HTCC2649]
gi|84382551|gb|EAP98433.1| phosphoribosylformylglycinamidine synthase [Janibacter sp. HTCC2649]
Length=76
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/59 (43%), Positives = 32/59 (55%), Gaps = 0/59 (0%)
Query 42 LATEVPVDAVNGLNQPSVVSCDNTQTIPVCDLGRQIGYLLASQEPALAEAIGNAFDLDW 100
L+ E+PV GL++ SV + D TI D G QIG L +E LA A+ AF L W
Sbjct 18 LSVELPVGIGEGLDRESVANLDEVMTIREEDPGPQIGVLPQVKETDLAAAVFQAFSLRW 76
>gi|15607799|ref|NP_215173.1| hypothetical protein Rv0659c [Mycobacterium tuberculosis H37Rv]
gi|15840062|ref|NP_335099.1| hypothetical protein MT0688 [Mycobacterium tuberculosis CDC1551]
gi|31791843|ref|NP_854336.1| hypothetical protein Mb0678c [Mycobacterium bovis AF2122/97]
75 more sequence titles
Length=102
Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/69 (41%), Positives = 39/69 (57%), Gaps = 1/69 (1%)
Query 13 RPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAV-NGLNQPSVVSCDNTQTIPVC 71
RPVL+LTR+ V + V V +T T RGL +E+ + AV N + VV+ DN T+P
Sbjct 16 RPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRVPSDCVVNFDNIHTLPRT 75
Query 72 DLGRQIGYL 80
R+I L
Sbjct 76 AFRRRITRL 84
>gi|119357199|ref|YP_911843.1| transcriptional modulator of MazE/toxin, MazF [Chlorobium phaeobacteroides
DSM 266]
gi|119354548|gb|ABL65419.1| transcriptional modulator of MazE/toxin, MazF [Chlorobium phaeobacteroides
DSM 266]
Length=111
Score = 41.6 bits (96), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/73 (36%), Positives = 39/73 (54%), Gaps = 4/73 (5%)
Query 11 KARPVLILTREVVRPHLTNVTVAPITTTVRG---LATEVPVDAVNGLNQPSVVSCDNTQT 67
K RP LI+ + H +VTV PIT+ +R +V ++ NGL + S + D QT
Sbjct 17 KPRPALIVQSDYFSGH-PSVTVLPITSELRQTPLFRIDVEPESGNGLRKRSQIMVDKIQT 75
Query 68 IPVCDLGRQIGYL 80
+P +G+ IG L
Sbjct 76 VPAEKIGKAIGIL 88
>gi|291542825|emb|CBL15935.1| Growth inhibitor [Ruminococcus bromii L2-63]
Length=174
Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/94 (33%), Positives = 46/94 (49%), Gaps = 7/94 (7%)
Query 7 AQLDKARPVLILTREVVRPHLTNVTVAPITTTVRG---LATEVPVDAVNGLNQPSVVSCD 63
++ + RPV+I+ +V H V +A IT+ L T +DA NGL PS+V +
Sbjct 21 SEQEGYRPVVIIQNDVGNKHSPTVIIASITSKKDAKPKLPTHYYIDAENGLELPSIVLLE 80
Query 64 NTQTIPVCDLGRQIGYLLASQ----EPALAEAIG 93
+T+ LG IG+L ALA +IG
Sbjct 81 QLRTVDKRRLGNFIGHLSEKHIHGINHALAVSIG 114
>gi|167044217|gb|ABZ08898.1| putative PemK-like protein [uncultured marine microorganism HF4000_APKG5H11]
Length=105
Score = 40.8 bits (94), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/86 (34%), Positives = 43/86 (50%), Gaps = 0/86 (0%)
Query 13 RPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVVSCDNTQTIPVCD 72
RPV++++R+ +TVAP+T VR L EV + +GL Q S + D+ TIP
Sbjct 18 RPVVLISRDSAYSVREFITVAPVTARVRRLPIEVLLGPHDGLPQNSAANLDSMLTIPKSS 77
Query 73 LGRQIGYLLASQEPALAEAIGNAFDL 98
+ I L + A+ AI A L
Sbjct 78 IHDYIASLSDDKVRAVDAAIHFALGL 103
>gi|153869667|ref|ZP_01999211.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152073872|gb|EDN70794.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length=105
Score = 40.8 bits (94), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/88 (32%), Positives = 42/88 (48%), Gaps = 0/88 (0%)
Query 11 KARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVVSCDNTQTIPV 70
K RPV+I++R P P+TT R A EV + + LNQ SV + ++P
Sbjct 18 KTRPVVIVSRYDPEPPRALTIYIPLTTQYRNSAYEVVLPKLRFLNQNSVANVQGIGSLPT 77
Query 71 CDLGRQIGYLLASQEPALAEAIGNAFDL 98
L R++G L + +AI A D+
Sbjct 78 IRLERKLGELPNEIMLKIKQAILFALDM 105
>gi|189499698|ref|YP_001959168.1| transcriptional modulator of MazE/toxin, MazF [Chlorobium phaeobacteroides
BS1]
gi|189495139|gb|ACE03687.1| transcriptional modulator of MazE/toxin, MazF [Chlorobium phaeobacteroides
BS1]
Length=107
Score = 40.4 bits (93), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/92 (32%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query 11 KARPVLILTREVVRPHLTNVTVAPITTTVRG---LATEVPVDAVNGLNQPSVVSCDNTQT 67
K RP L++ + H ++TV P+T+ +R EV + NGL + S V D Q+
Sbjct 17 KPRPALVIQSDFFSDH-PSITVVPVTSELRQAPLFRIEVRPTSANGLKKMSQVMVDKVQS 75
Query 68 IPVCDLGRQIGYL----LASQEPALAEAIGNA 95
+P +G+ G+L + S ALA +G A
Sbjct 76 VPAEKVGQVFGHLEDATMVSVNRALALWLGFA 107
>gi|308379835|ref|ZP_07487770.2| toxin [Mycobacterium tuberculosis SUMu011]
gi|308363397|gb|EFP52248.1| toxin [Mycobacterium tuberculosis SUMu011]
Length=118
Score = 40.4 bits (93), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/69 (41%), Positives = 39/69 (57%), Gaps = 1/69 (1%)
Query 13 RPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAV-NGLNQPSVVSCDNTQTIPVC 71
RPVL+LTR+ V + V V +T T RGL +E+ + AV N + VV+ DN T+P
Sbjct 32 RPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELTAVENRVPSDCVVNFDNIHTLPRT 91
Query 72 DLGRQIGYL 80
R+I L
Sbjct 92 AFRRRITRL 100
>gi|166365013|ref|YP_001657286.1| PemK family protein [Microcystis aeruginosa NIES-843]
gi|166087386|dbj|BAG02094.1| PemK family protein [Microcystis aeruginosa NIES-843]
Length=106
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/88 (31%), Positives = 46/88 (53%), Gaps = 8/88 (9%)
Query 3 PIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVN-----GLNQP 57
P ++L K RP +I++ + L V VAPIT+TV+ T +P+D N L+Q
Sbjct 14 PTRGSELQKTRPCVIVSPSEINARLRTVVVAPITSTVKKYPTRIPIDQENVRGSIALDQ- 72
Query 58 SVVSCDNTQTIP-VCDLGRQIGYLLASQ 84
+ + D T+ + + L Q+ L+A +
Sbjct 73 -IRAIDKTRIVAQISRLDEQMAMLVADR 99
>gi|295090171|emb|CBK76278.1| Growth inhibitor [Clostridium cf. saccharolyticum K10]
Length=138
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/98 (34%), Positives = 50/98 (52%), Gaps = 7/98 (7%)
Query 3 PIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTT--VRG-LATEVPVDAVNGLNQPSV 59
P+ ++ RPVLI+ ++ + V VAPIT+ V+ L T +D N LN+PSV
Sbjct 16 PVFGSEQSGFRPVLIIQNDIGNRYSPTVIVAPITSKPDVKAKLPTHCRLDLKNCLNEPSV 75
Query 60 VSCDNTQTIPVCDLGRQIGYLLASQ----EPALAEAIG 93
V + +T+ L + IG L S ALA ++G
Sbjct 76 VLLEQLRTLDKRRLKKYIGKLKKSSMNEVNRALAVSVG 113
>gi|254885287|ref|ZP_05257997.1| PemK family protein [Bacteroides sp. 4_3_47FAA]
Length=108
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/94 (29%), Positives = 46/94 (49%), Gaps = 3/94 (3%)
Query 3 PIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVVSC 62
P ++ K RP +++T + +LT V +APIT+T+R V + +V G + ++
Sbjct 16 PTRGGEMAKTRPCIVVTPSDLNMYLTTVVIAPITSTIRNYPYRV-LCSVAG--RDGEIAT 72
Query 63 DNTQTIPVCDLGRQIGYLLASQEPALAEAIGNAF 96
D +T+ L R+IG L + L E F
Sbjct 73 DQIRTVDKSRLKRKIGDLNFCEIKKLKEVFHQMF 106
>gi|345456848|gb|EET18389.2| PemK family protein [Bacteroides sp. 4_3_47FAA]
Length=106
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/94 (29%), Positives = 46/94 (49%), Gaps = 3/94 (3%)
Query 3 PIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVVSC 62
P ++ K RP +++T + +LT V +APIT+T+R V + +V G + ++
Sbjct 14 PTRGGEMAKTRPCIVVTPSDLNMYLTTVVIAPITSTIRNYPYRV-LCSVAG--RDGEIAT 70
Query 63 DNTQTIPVCDLGRQIGYLLASQEPALAEAIGNAF 96
D +T+ L R+IG L + L E F
Sbjct 71 DQIRTVDKSRLKRKIGDLNFCEIKKLKEVFHQMF 104
>gi|24376269|ref|NP_720377.1| mRNA endonuclease-like protein PemK [Shewanella oneidensis MR-1]
gi|24344841|gb|AAN52977.1| toxin module of toxin-antitoxin system, mRNA endonuclease-like,
PemK [Shewanella oneidensis MR-1]
Length=105
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/91 (28%), Positives = 48/91 (53%), Gaps = 3/91 (3%)
Query 7 AQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVVSCDNTQ 66
A+++K RP ++++ + + HL V +AP+T+T RG PV V G S V+ D +
Sbjct 18 AEINKTRPCVVISPDDINQHLRTVIIAPLTSTPRGWPFR-PV--VQGSKVKSEVAIDQMR 74
Query 67 TIPVCDLGRQIGYLLASQEPALAEAIGNAFD 97
+ + +++G L A + +A + F+
Sbjct 75 AVDKNRIIKKLGQLTAIESNLVASVVKEFFE 105
>gi|189460996|ref|ZP_03009781.1| hypothetical protein BACCOP_01643 [Bacteroides coprocola DSM
17136]
gi|198277721|ref|ZP_03210252.1| hypothetical protein BACPLE_03944 [Bacteroides plebeius DSM 17135]
gi|265768062|ref|ZP_06095444.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|319643871|ref|ZP_07998464.1| hypothetical protein HMPREF9011_04067 [Bacteroides sp. 3_1_40A]
gi|189432335|gb|EDV01320.1| hypothetical protein BACCOP_01643 [Bacteroides coprocola DSM
17136]
gi|198269418|gb|EDY93688.1| hypothetical protein BACPLE_03944 [Bacteroides plebeius DSM 17135]
gi|263252313|gb|EEZ23849.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|317384612|gb|EFV65577.1| hypothetical protein HMPREF9011_04067 [Bacteroides sp. 3_1_40A]
Length=106
Score = 39.3 bits (90), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/94 (30%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query 3 PIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVVSC 62
P ++ K RP +++T + +LT V +APIT+T+R V + +V G + ++
Sbjct 14 PTRGGEMAKTRPCVVVTPSDLNMYLTIVVIAPITSTIRNYPYRV-LCSVAG--RDGEIAT 70
Query 63 DNTQTIPVCDLGRQIGYLLASQEPALAEAIGNAF 96
D +T+ L R+IG L S+ L E F
Sbjct 71 DQIRTVDKSRLKRKIGDLNFSEIKRLKEVFHQMF 104
>gi|154504833|ref|ZP_02041571.1| hypothetical protein RUMGNA_02343 [Ruminococcus gnavus ATCC 29149]
gi|153794716|gb|EDN77136.1| hypothetical protein RUMGNA_02343 [Ruminococcus gnavus ATCC 29149]
Length=118
Score = 39.3 bits (90), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/72 (32%), Positives = 38/72 (53%), Gaps = 3/72 (4%)
Query 13 RPVLILTREVVRPHLTNVTVAPITTTV---RGLATEVPVDAVNGLNQPSVVSCDNTQTIP 69
RP L+++ H VTV P++ V + L T V + +GLN+PS+ + +T+
Sbjct 24 RPALVVSNNKANKHSPVVTVVPLSARVWKKKYLPTHVQIPKGSGLNKPSMALAEQVETLD 83
Query 70 VCDLGRQIGYLL 81
LG +IG +L
Sbjct 84 KTRLGERIGKVL 95
>gi|21673827|ref|NP_661892.1| hypothetical protein CT0999 [Chlorobium tepidum TLS]
gi|21646959|gb|AAM72234.1| conserved hypothetical protein [Chlorobium tepidum TLS]
Length=107
Score = 39.3 bits (90), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/91 (30%), Positives = 45/91 (50%), Gaps = 4/91 (4%)
Query 11 KARPVLILTREVVRPHLTNVTVAPITTTVRG---LATEVPVDAVNGLNQPSVVSCDNTQT 67
K RP +++ + P +VTV PI + +R +V +A NGL +PS + D Q
Sbjct 17 KLRPAVVVLSDYF-PEHPSVTVLPIISDLRSTPFFRIDVEPEAQNGLLKPSRIMIDKAQA 75
Query 68 IPVCDLGRQIGYLLASQEPALAEAIGNAFDL 98
+P +G+ IG L ++ A+ A+ F
Sbjct 76 VPSEKIGKVIGLLDDTKMMAVNRALALWFGF 106
>gi|153869986|ref|ZP_01999479.1| PemK-like protein [Beggiatoa sp. PS]
gi|152073554|gb|EDN70527.1| PemK-like protein [Beggiatoa sp. PS]
Length=122
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/60 (37%), Positives = 32/60 (54%), Gaps = 3/60 (5%)
Query 1 MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVV 60
P ++ K RP L+L+ + + PI+T++RG ATEVP VN L PSV+
Sbjct 17 YEPTKGKEIGKYRPTLVLSSQEYNQKTGLLIGCPISTSIRGSATEVP---VNYLESPSVI 73
Lambda K H
0.320 0.135 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 127822873252
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40