BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1109c Length=212 Score E Sequences producing significant alignments: (Bits) Value gi|15608249|ref|NP_215625.1| hypothetical protein Rv1109c [Mycob... 423 6e-117 gi|121637040|ref|YP_977263.1| hypothetical protein BCG_1169c [My... 421 3e-116 gi|340626123|ref|YP_004744575.1| hypothetical protein MCAN_11191... 418 2e-115 gi|240171092|ref|ZP_04749751.1| hypothetical protein MkanA1_1740... 297 6e-79 gi|118616062|ref|YP_904394.1| hypothetical protein MUL_0169 [Myc... 289 2e-76 gi|41408783|ref|NP_961619.1| hypothetical protein MAP2685 [Mycob... 289 2e-76 gi|118463104|ref|YP_880475.1| hypothetical protein MAV_1229 [Myc... 287 6e-76 gi|254819703|ref|ZP_05224704.1| hypothetical protein MintA_07259... 275 2e-72 gi|342861698|ref|ZP_08718344.1| hypothetical protein MCOL_22531 ... 274 7e-72 gi|296169975|ref|ZP_06851582.1| conserved hypothetical protein [... 266 1e-69 gi|15828044|ref|NP_302307.1| hypothetical protein ML1939 [Mycoba... 262 3e-68 gi|333989699|ref|YP_004522313.1| hypothetical protein JDM601_105... 252 2e-65 gi|336458724|gb|EGO37684.1| hypothetical protein MAPs_10070 [Myc... 247 8e-64 gi|254774113|ref|ZP_05215629.1| hypothetical protein MaviaA2_054... 245 3e-63 gi|118472437|ref|YP_889471.1| hypothetical protein MSMEG_5225 [M... 229 2e-58 gi|126436908|ref|YP_001072599.1| hypothetical protein Mjls_4337 ... 227 9e-58 gi|108801070|ref|YP_641267.1| hypothetical protein Mmcs_4106 [My... 226 2e-57 gi|120405584|ref|YP_955413.1| hypothetical protein Mvan_4632 [My... 223 1e-56 gi|315443129|ref|YP_004076008.1| hypothetical protein Mspyr1_150... 222 4e-56 gi|145222666|ref|YP_001133344.1| hypothetical protein Mflv_2078 ... 221 6e-56 gi|169628349|ref|YP_001701998.1| hypothetical protein MAB_1256c ... 178 6e-43 gi|325676552|ref|ZP_08156230.1| hypothetical protein HMPREF0724_... 156 2e-36 gi|226365340|ref|YP_002783123.1| hypothetical protein ROP_59310 ... 143 1e-32 gi|226307722|ref|YP_002767682.1| hypothetical protein RER_42350 ... 143 1e-32 gi|333921059|ref|YP_004494640.1| hypothetical protein AS9A_3399 ... 142 2e-32 gi|229493867|ref|ZP_04387639.1| conserved hypothetical protein [... 142 3e-32 gi|111022832|ref|YP_705804.1| hypothetical protein RHA1_ro05869 ... 136 2e-30 gi|312138755|ref|YP_004006091.1| hypothetical protein REQ_13160 ... 135 5e-30 gi|262201634|ref|YP_003272842.1| hypothetical protein Gbro_1679 ... 131 7e-29 gi|326381854|ref|ZP_08203547.1| hypothetical protein SCNU_02872 ... 121 5e-26 gi|343925119|ref|ZP_08764651.1| hypothetical protein GOALK_033_0... 113 2e-23 gi|54026770|ref|YP_121012.1| hypothetical protein nfa47960 [Noca... 110 1e-22 gi|296140798|ref|YP_003648041.1| hypothetical protein Tpau_3115 ... 107 1e-21 gi|257057117|ref|YP_003134949.1| hypothetical protein Svir_31490... 100 2e-19 gi|302530083|ref|ZP_07282425.1| conserved hypothetical protein [... 99.0 4e-19 gi|331694830|ref|YP_004331069.1| hypothetical protein Psed_0964 ... 94.0 1e-17 gi|324997964|ref|ZP_08119076.1| hypothetical protein PseP1_04326... 93.6 2e-17 gi|256374877|ref|YP_003098537.1| hypothetical protein Amir_0728 ... 85.5 5e-15 gi|134097536|ref|YP_001103197.1| hypothetical protein SACE_0938 ... 81.6 6e-14 gi|291009728|ref|ZP_06567701.1| hypothetical protein SeryN2_3487... 81.6 6e-14 gi|300789869|ref|YP_003770160.1| hypothetical protein AMED_8055 ... 65.9 4e-09 gi|296393509|ref|YP_003658393.1| hypothetical protein Srot_1089 ... 64.3 1e-08 gi|317506621|ref|ZP_07964412.1| hypothetical protein HMPREF9336_... 62.0 6e-08 gi|319950221|ref|ZP_08024148.1| hypothetical protein ES5_11641 [... 60.5 2e-07 gi|284989585|ref|YP_003408139.1| hypothetical protein Gobs_1007 ... 53.9 2e-05 gi|258654508|ref|YP_003203664.1| hypothetical protein Namu_4388 ... 53.5 2e-05 gi|134099819|ref|YP_001105480.1| hypothetical protein SACE_3280 ... 38.5 0.62 gi|72160874|ref|YP_288531.1| hypothetical protein Tfu_0470 [Ther... 38.1 0.83 gi|271969672|ref|YP_003343868.1| hypothetical protein Sros_8481 ... 37.7 1.1 gi|315444063|ref|YP_004076942.1| hypothetical protein Mspyr1_246... 37.7 1.3 >gi|15608249|ref|NP_215625.1| hypothetical protein Rv1109c [Mycobacterium tuberculosis H37Rv] gi|15840546|ref|NP_335583.1| hypothetical protein MT1140 [Mycobacterium tuberculosis CDC1551] gi|31792302|ref|NP_854795.1| hypothetical protein Mb1139c [Mycobacterium bovis AF2122/97] 74 more sequence titles Length=212 Score = 423 bits (1088), Expect = 6e-117, Method: Compositional matrix adjust. Identities = 212/212 (100%), Positives = 212/212 (100%), Gaps = 0/212 (0%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN Sbjct 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD Sbjct 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 Query 121 TPETTTASRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDVP 180 TPETTTASRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDVP Sbjct 121 TPETTTASRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDVP 180 Query 181 ELEALLAYEQATKARAPFQTLLANRITRATAK 212 ELEALLAYEQATKARAPFQTLLANRITRATAK Sbjct 181 ELEALLAYEQATKARAPFQTLLANRITRATAK 212 >gi|121637040|ref|YP_977263.1| hypothetical protein BCG_1169c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989513|ref|YP_002644200.1| hypothetical protein JTY_1142 [Mycobacterium bovis BCG str. Tokyo 172] gi|121492687|emb|CAL71156.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772626|dbj|BAH25432.1| hypothetical protein JTY_1142 [Mycobacterium bovis BCG str. Tokyo 172] gi|341601056|emb|CCC63728.1| conserved hypothetical protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=212 Score = 421 bits (1083), Expect = 3e-116, Method: Compositional matrix adjust. Identities = 211/212 (99%), Positives = 211/212 (99%), Gaps = 0/212 (0%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN Sbjct 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD Sbjct 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 Query 121 TPETTTASRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDVP 180 TPETTTASRSADRSTNPKTAKHPKSA KPTVPTPAVAAELDYPALTLAQLRARLHTLDVP Sbjct 121 TPETTTASRSADRSTNPKTAKHPKSATKPTVPTPAVAAELDYPALTLAQLRARLHTLDVP 180 Query 181 ELEALLAYEQATKARAPFQTLLANRITRATAK 212 ELEALLAYEQATKARAPFQTLLANRITRATAK Sbjct 181 ELEALLAYEQATKARAPFQTLLANRITRATAK 212 >gi|340626123|ref|YP_004744575.1| hypothetical protein MCAN_11191 [Mycobacterium canettii CIPT 140010059] gi|340004313|emb|CCC43455.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=212 Score = 418 bits (1075), Expect = 2e-115, Method: Compositional matrix adjust. Identities = 210/212 (99%), Positives = 210/212 (99%), Gaps = 0/212 (0%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN Sbjct 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLS ASEAKNDDRRSDGRFALYSVSD Sbjct 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSGASEAKNDDRRSDGRFALYSVSD 120 Query 121 TPETTTASRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDVP 180 TPETTTAS SADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDVP Sbjct 121 TPETTTASMSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDVP 180 Query 181 ELEALLAYEQATKARAPFQTLLANRITRATAK 212 ELEALLAYEQATKARAPFQTLLANRITRATAK Sbjct 181 ELEALLAYEQATKARAPFQTLLANRITRATAK 212 >gi|240171092|ref|ZP_04749751.1| hypothetical protein MkanA1_17406 [Mycobacterium kansasii ATCC 12478] Length=211 Score = 297 bits (761), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 161/216 (75%), Positives = 172/216 (80%), Gaps = 9/216 (4%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 MATAPYGVRLLVGAATVAVEET+KLPRTILMYPMTL SQAAH+VMRFQQ LAELVIKGD+ Sbjct 1 MATAPYGVRLLVGAATVAVEETIKLPRTILMYPMTLISQAAHLVMRFQQNLAELVIKGDS 60 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 TLETLFPPKDE+PEWATFDED DA EG L D +A DRRS GRFALYSVSD Sbjct 61 TLETLFPPKDEQPEWATFDEDQLDAAEGWDGSFTALPD-PDAAGADRRSAGRFALYSVSD 119 Query 121 TPETTTASRSADRSTNPKTAKHPK----SAAKPTVPTPAVAAELDYPALTLAQLRARLHT 176 E SR D T P A+ PK S+ VP PA+A+ELDYP+LTLAQLRARL + Sbjct 120 ADE----SRDVDSPTKPMPARQPKPPKTSSPNSAVPAPAIASELDYPSLTLAQLRARLQS 175 Query 177 LDVPELEALLAYEQATKARAPFQTLLANRITRATAK 212 LDV ELEALLAYEQATKARAPFQTLLANRITRATAK Sbjct 176 LDVNELEALLAYEQATKARAPFQTLLANRITRATAK 211 >gi|118616062|ref|YP_904394.1| hypothetical protein MUL_0169 [Mycobacterium ulcerans Agy99] gi|183984327|ref|YP_001852618.1| hypothetical protein MMAR_4356 [Mycobacterium marinum M] gi|118568172|gb|ABL02923.1| conserved protein [Mycobacterium ulcerans Agy99] gi|183177653|gb|ACC42763.1| conserved protein [Mycobacterium marinum M] Length=205 Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 156/215 (73%), Positives = 171/215 (80%), Gaps = 13/215 (6%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 MATAPYGVRL+VGAATVAVEETMKLPRTILMYPMTLASQAAH+VM FQQ LAELVIKGD+ Sbjct 1 MATAPYGVRLIVGAATVAVEETMKLPRTILMYPMTLASQAAHLVMLFQQNLAELVIKGDS 60 Query 61 TLETLFPPKDEKPEWATFDEDLPD---ALEGTSIPLLGLSDASEAKNDDRRSDGRFALYS 117 TLE+LFPPKDE+ WATFDEDLPD ALEG++ L DA DRR++GRFALYS Sbjct 61 TLESLFPPKDEQAAWATFDEDLPDDANALEGSATALADSMDA------DRRTEGRFALYS 114 Query 118 VSDTPETTTASRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTL 177 VSD E SR A+ PKSAAKP+ PAVA +LDY +LTLAQLRARL +L Sbjct 115 VSDPAE----SRETSSPVRKAPARQPKSAAKPSTEIPAVAGKLDYASLTLAQLRARLASL 170 Query 178 DVPELEALLAYEQATKARAPFQTLLANRITRATAK 212 V +LEALLAYEQATKARAPFQTLLANRITRATAK Sbjct 171 SVEDLEALLAYEQATKARAPFQTLLANRITRATAK 205 >gi|41408783|ref|NP_961619.1| hypothetical protein MAP2685 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397141|gb|AAS05002.1| hypothetical protein MAP_2685 [Mycobacterium avium subsp. paratuberculosis K-10] Length=198 Score = 289 bits (739), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 154/213 (73%), Positives = 174/213 (82%), Gaps = 16/213 (7%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 MATAPYGVRLLVGAATVAVEETM+LP+TILMYPMTLASQAAH+VMRFQQ LAELVIKGD+ Sbjct 1 MATAPYGVRLLVGAATVAVEETMRLPKTILMYPMTLASQAAHIVMRFQQNLAELVIKGDS 60 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 TLE++FPPKDEKPEWATFDED+ DA +G + P +D SE +RR++GRFALYSV+D Sbjct 61 TLESIFPPKDEKPEWATFDEDIDDAADGYANP----ADGSEG---ERRAEGRFALYSVAD 113 Query 121 TPETTTA-SRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDV 179 + +A +RSA S P AA+ +VPTPAV ELDY ALTLAQLRARL +L V Sbjct 114 AHDDASALTRSARPSAKP--------AAEASVPTPAVVTELDYSALTLAQLRARLQSLSV 165 Query 180 PELEALLAYEQATKARAPFQTLLANRITRATAK 212 ELEALLAYEQATK RAPFQTLLANRITRATAK Sbjct 166 DELEALLAYEQATKGRAPFQTLLANRITRATAK 198 >gi|118463104|ref|YP_880475.1| hypothetical protein MAV_1229 [Mycobacterium avium 104] gi|118164391|gb|ABK65288.1| conserved hypothetical protein [Mycobacterium avium 104] Length=198 Score = 287 bits (735), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 153/213 (72%), Positives = 173/213 (82%), Gaps = 16/213 (7%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 MATAPYGVRLLVGAATVAVEETM+LP+TILMYPMTLASQAAH+VMRFQQ LAELVIKGD+ Sbjct 1 MATAPYGVRLLVGAATVAVEETMRLPKTILMYPMTLASQAAHIVMRFQQNLAELVIKGDS 60 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 TLE++FPPKDEKPEWATFDED+ DA +G + P +D SE +RR++GRFALYSV+D Sbjct 61 TLESIFPPKDEKPEWATFDEDIDDAADGYANP----ADGSEG---ERRAEGRFALYSVAD 113 Query 121 TPETTTA-SRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDV 179 + +A +RSA S P AA+ +VPTPAV ELDY ALTLAQLRARL +L V Sbjct 114 AHDDASALTRSARPSAKP--------AAEASVPTPAVVTELDYSALTLAQLRARLQSLSV 165 Query 180 PELEALLAYEQATKARAPFQTLLANRITRATAK 212 ELEALLAYEQATK RAPFQTLLANRITRA AK Sbjct 166 DELEALLAYEQATKGRAPFQTLLANRITRANAK 198 >gi|254819703|ref|ZP_05224704.1| hypothetical protein MintA_07259 [Mycobacterium intracellulare ATCC 13950] Length=199 Score = 275 bits (704), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 144/212 (68%), Positives = 165/212 (78%), Gaps = 13/212 (6%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 MATAPYGVRLLVGAATVAVEET++LP+TILMYPMTLASQAAH+VMRFQQ LAELVIKGD+ Sbjct 1 MATAPYGVRLLVGAATVAVEETIRLPKTILMYPMTLASQAAHIVMRFQQNLAELVIKGDS 60 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 TLE++FPPKDEKPEWATFDED+ DA++G + ++ +RR++GRFALYSV+D Sbjct 61 TLESIFPPKDEKPEWATFDEDVDDAIDG------AYATVTDGGEGERRAEGRFALYSVAD 114 Query 121 TPETTTASRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDVP 180 E +A R + K AA +V PAVA ELDY ALTLAQLRARL +L V Sbjct 115 AHEDASALTKPARPSK-------KPAAGASVSQPAVATELDYSALTLAQLRARLQSLSVD 167 Query 181 ELEALLAYEQATKARAPFQTLLANRITRATAK 212 ELE LLAYEQATK RAPFQTLLANRITRA AK Sbjct 168 ELEDLLAYEQATKGRAPFQTLLANRITRANAK 199 >gi|342861698|ref|ZP_08718344.1| hypothetical protein MCOL_22531 [Mycobacterium colombiense CECT 3035] gi|342130832|gb|EGT84128.1| hypothetical protein MCOL_22531 [Mycobacterium colombiense CECT 3035] Length=199 Score = 274 bits (700), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 143/213 (68%), Positives = 164/213 (77%), Gaps = 15/213 (7%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 M TAPYGVRLLVGAATVAVEET++LP+TILMYPMTLASQAAH+VMRFQQ LAEL IKGD+ Sbjct 1 MGTAPYGVRLLVGAATVAVEETIRLPKTILMYPMTLASQAAHIVMRFQQNLAELAIKGDS 60 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 TLE++FPP+DEKPEWATFDEDL DA++ G S + +RR++GRFALYSV+D Sbjct 61 TLESIFPPRDEKPEWATFDEDLNDAIDA------GYSPVPDGGEGERRAEGRFALYSVAD 114 Query 121 TPETTTA-SRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDV 179 E +A +R A +S P A +VP P V ELDY +LTLAQLRARL +L V Sbjct 115 AHEDASALTRPARQSKKP--------GANASVPQPEVVTELDYSSLTLAQLRARLQSLSV 166 Query 180 PELEALLAYEQATKARAPFQTLLANRITRATAK 212 ELEALLAYEQATK RAPFQTLLANRITRA AK Sbjct 167 DELEALLAYEQATKGRAPFQTLLANRITRANAK 199 >gi|296169975|ref|ZP_06851582.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895379|gb|EFG75085.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=193 Score = 266 bits (681), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 142/212 (67%), Positives = 161/212 (76%), Gaps = 19/212 (8%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 MATAPYGVRLLVGAATVAVEETMKLP+TILMYPMTLASQAAH+VM FQQ LAELVIKGD+ Sbjct 1 MATAPYGVRLLVGAATVAVEETMKLPKTILMYPMTLASQAAHLVMVFQQNLAELVIKGDS 60 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 TLE++FPPKDE+PEWATFDEDLP+AL + +G DRR++GRFALYS++D Sbjct 61 TLESIFPPKDEQPEWATFDEDLPEALAAPTDEGVG--------EGDRRTEGRFALYSLAD 112 Query 121 TPETTTASRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDVP 180 + +S++ K VP P+V A LDY LTLAQLRARL +L V Sbjct 113 AAADAAPLKQGGKSSD-----------KSAVPQPSVVAALDYATLTLAQLRARLQSLSVD 161 Query 181 ELEALLAYEQATKARAPFQTLLANRITRATAK 212 ELEALLAYEQATKARAPFQTLLANRITRA AK Sbjct 162 ELEALLAYEQATKARAPFQTLLANRITRANAK 193 >gi|15828044|ref|NP_302307.1| hypothetical protein ML1939 [Mycobacterium leprae TN] gi|221230521|ref|YP_002503937.1| hypothetical protein MLBr_01939 [Mycobacterium leprae Br4923] gi|4539095|emb|CAB39813.1| hypothetical protein MLCB1222.07 [Mycobacterium leprae] gi|13093597|emb|CAC30894.1| conserved hypothetical protein [Mycobacterium leprae] gi|219933628|emb|CAR72036.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=205 Score = 262 bits (669), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 145/213 (69%), Positives = 160/213 (76%), Gaps = 9/213 (4%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 MATAPYGVRLLVGAATVAVEET+KLPRT+LM PMTLASQ AH+VMRFQQ LA LV KGD Sbjct 1 MATAPYGVRLLVGAATVAVEETLKLPRTVLMCPMTLASQVAHIVMRFQQNLAGLVTKGDG 60 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 TLETLFP K E+PEWATFDEDL D ++ T P L + D E D RS+ RFALYSVSD Sbjct 61 TLETLFPAKSEQPEWATFDEDLTDTVDETPTP-LPVGDVIEI---DCRSEERFALYSVSD 116 Query 121 TPETTTASRSADRSTNPKTAKH-PKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDV 179 T E AD T +H K+AAK V P VA ++DYPALTLAQLR +L +LD+ Sbjct 117 TSE----PEDADSLTQSMPTRHVKKAAAKLMVHAPEVADDIDYPALTLAQLRGKLQSLDL 172 Query 180 PELEALLAYEQATKARAPFQTLLANRITRATAK 212 ELEALL YEQATKARAPFQTLLANRIT TAK Sbjct 173 GELEALLVYEQATKARAPFQTLLANRITSTTAK 205 >gi|333989699|ref|YP_004522313.1| hypothetical protein JDM601_1059 [Mycobacterium sp. JDM601] gi|333485667|gb|AEF35059.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=208 Score = 252 bits (644), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 135/212 (64%), Positives = 155/212 (74%), Gaps = 6/212 (2%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 MATAP+GVRLLVGAATVAVEETMKLP+TIL YPMTLASQAAH VMR+QQ +AELV KGD+ Sbjct 3 MATAPFGVRLLVGAATVAVEETMKLPQTILTYPMTLASQAAHAVMRWQQNIAELVNKGDS 62 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 TLE+LFPPKDE+PEWATFDED D + G + D + + R++GRFALYS S+ Sbjct 63 TLESLFPPKDEQPEWATFDEDTDDGVNGAEFGDTAVFDGFDDADSGPRTEGRFALYSFSE 122 Query 121 TPETTTASRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDVP 180 + ASR + P +K A VPTP + ELDY LTLAQLRARL +L V Sbjct 123 GGDDRPASR-GETDVTPAGSK-----ADAAVPTPDLVDELDYGNLTLAQLRARLASLSVD 176 Query 181 ELEALLAYEQATKARAPFQTLLANRITRATAK 212 ELE LL YE+ATKARAPFQTLLANRITR T K Sbjct 177 ELETLLGYEEATKARAPFQTLLANRITRTTTK 208 >gi|336458724|gb|EGO37684.1| hypothetical protein MAPs_10070 [Mycobacterium avium subsp. paratuberculosis S397] Length=176 Score = 247 bits (630), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 132/191 (70%), Positives = 152/191 (80%), Gaps = 16/191 (8%) Query 23 MKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDNTLETLFPPKDEKPEWATFDEDL 82 M+LP+TILMYPMTLASQAAH+VMRFQQ LAELVIKGD+TLE++FPPKDEKPEWATFDED+ Sbjct 1 MRLPKTILMYPMTLASQAAHIVMRFQQNLAELVIKGDSTLESIFPPKDEKPEWATFDEDI 60 Query 83 PDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSDTPETTTA-SRSADRSTNPKTAK 141 DA +G + P +D SE +RR++GRFALYSV+D + +A +RSA S P Sbjct 61 DDAADGYANP----ADGSEG---ERRAEGRFALYSVADAHDDASALTRSARPSAKP---- 109 Query 142 HPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDVPELEALLAYEQATKARAPFQTL 201 AA+ +VPTPAV ELDY ALTLAQLRARL +L V ELEALLAYEQATK RAPFQTL Sbjct 110 ----AAEASVPTPAVVTELDYSALTLAQLRARLQSLSVDELEALLAYEQATKGRAPFQTL 165 Query 202 LANRITRATAK 212 LANRITRATAK Sbjct 166 LANRITRATAK 176 >gi|254774113|ref|ZP_05215629.1| hypothetical protein MaviaA2_05490 [Mycobacterium avium subsp. avium ATCC 25291] Length=176 Score = 245 bits (626), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 131/191 (69%), Positives = 151/191 (80%), Gaps = 16/191 (8%) Query 23 MKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDNTLETLFPPKDEKPEWATFDEDL 82 M+LP+TILMYPMTLASQAAH+VMRFQQ LAELVIKGD+TLE++FPPKDEKPEWATFDED+ Sbjct 1 MRLPKTILMYPMTLASQAAHIVMRFQQNLAELVIKGDSTLESIFPPKDEKPEWATFDEDI 60 Query 83 PDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSDTPETTTA-SRSADRSTNPKTAK 141 DA +G + P +D SE +RR++GRFALYSV+D + +A +RSA S P Sbjct 61 DDAADGYANP----ADGSEG---ERRAEGRFALYSVADAHDDASALTRSARPSAKP---- 109 Query 142 HPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDVPELEALLAYEQATKARAPFQTL 201 AA+ +VPTPAV ELDY ALTLAQLRARL +L V ELEALLAYEQATK RAPFQTL Sbjct 110 ----AAEASVPTPAVVTELDYSALTLAQLRARLQSLSVDELEALLAYEQATKGRAPFQTL 165 Query 202 LANRITRATAK 212 LANRITRA AK Sbjct 166 LANRITRANAK 176 >gi|118472437|ref|YP_889471.1| hypothetical protein MSMEG_5225 [Mycobacterium smegmatis str. MC2 155] gi|118173724|gb|ABK74620.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=205 Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 128/214 (60%), Positives = 158/214 (74%), Gaps = 11/214 (5%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 M TAPYGVRLLVGAA +EE KLP+TIL YPMT+ASQAA++VM QQ LAELVIKGD Sbjct 1 MGTAPYGVRLLVGAAVTTLEEARKLPQTILTYPMTMASQAANLVMHVQQNLAELVIKGDE 60 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVS- 119 LE LFPPKDE+PEWATFDEDL D+ + + G S ++ + N RR++GRFALYS Sbjct 61 ALEQLFPPKDEQPEWATFDEDLQDSGDDDTA---GDSASTSSANGQRRTEGRFALYSTGT 117 Query 120 -DTPETTTASRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLD 178 D+ E+ A+RS+ K+++ K + T PAV AE+DY +LTLAQLRARL +L Sbjct 118 PDSAESEPAARSS------KSSEPSKPSEPETGEAPAVVAEMDYDSLTLAQLRARLTSLS 171 Query 179 VPELEALLAYEQATKARAPFQTLLANRITRATAK 212 + +LEALLAYE+A +ARAPF TLLANRITRA+AK Sbjct 172 IGDLEALLAYEEAGRARAPFVTLLANRITRASAK 205 >gi|126436908|ref|YP_001072599.1| hypothetical protein Mjls_4337 [Mycobacterium sp. JLS] gi|126236708|gb|ABO00109.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=184 Score = 227 bits (579), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 128/212 (61%), Positives = 147/212 (70%), Gaps = 28/212 (13%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 MATAPYGVRLLVGAA AVEET KLP TILMYPMT+ASQ A +V+ FQQ LA+LV KGD Sbjct 1 MATAPYGVRLLVGAAVTAVEETRKLPHTILMYPMTVASQVASIVIHFQQNLADLVNKGDE 60 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 TLE LFPPKDE+PEWATFDED A+ A + +RR++GRFAL+S + Sbjct 61 TLENLFPPKDEQPEWATFDED---------------DGAAPATDGERRTEGRFALFSTGE 105 Query 121 TPETTTASRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDVP 180 PETT + R A TPA+ ELDY +LTLAQLRARL +L V Sbjct 106 -PETTDTGDTGTRQ------------ASAASETPAIVTELDYESLTLAQLRARLPSLSVD 152 Query 181 ELEALLAYEQATKARAPFQTLLANRITRATAK 212 +LEALLAYE AT++RAPFQTLLANRITRATAK Sbjct 153 DLEALLAYEGATRSRAPFQTLLANRITRATAK 184 >gi|108801070|ref|YP_641267.1| hypothetical protein Mmcs_4106 [Mycobacterium sp. MCS] gi|119870212|ref|YP_940164.1| hypothetical protein Mkms_4182 [Mycobacterium sp. KMS] gi|108771489|gb|ABG10211.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696301|gb|ABL93374.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=184 Score = 226 bits (575), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 128/212 (61%), Positives = 147/212 (70%), Gaps = 28/212 (13%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 MATAPYGVRLLVGAA AVEET KLP TILMYPMT+ASQ A +V+ FQQ LA+LV KGD Sbjct 1 MATAPYGVRLLVGAAVTAVEETRKLPHTILMYPMTVASQVASIVIHFQQNLADLVNKGDE 60 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 TLE LFPPKDE+PEWATFDED +A A + +RR++GRFAL+S + Sbjct 61 TLENLFPPKDEQPEWATFDEDDGEA---------------PATDGERRTEGRFALFSTGE 105 Query 121 TPETTTASRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDVP 180 PETT + R A TPA+ ELDY +LTLAQLRARL +L V Sbjct 106 -PETTDTGDTGTRQ------------ASAASETPAIVTELDYESLTLAQLRARLPSLSVD 152 Query 181 ELEALLAYEQATKARAPFQTLLANRITRATAK 212 +LEALLAYE AT++RAPFQTLLANRITRATAK Sbjct 153 DLEALLAYEGATRSRAPFQTLLANRITRATAK 184 >gi|120405584|ref|YP_955413.1| hypothetical protein Mvan_4632 [Mycobacterium vanbaalenii PYR-1] gi|119958402|gb|ABM15407.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=193 Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 121/212 (58%), Positives = 156/212 (74%), Gaps = 19/212 (8%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 M+TAPYGVRLLVGAA A+EET KLP+TILMYPMT+ASQ A +VM+ QQ +A LVIKGD Sbjct 1 MSTAPYGVRLLVGAAVTAIEETRKLPQTILMYPMTIASQLAQLVMKMQQDVAVLVIKGDE 60 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 TLE++FPPKDE+PEWATFDEDLP G G A+ A++ +R ++GRFAL+S Sbjct 61 TLESIFPPKDEQPEWATFDEDLP----GDD----GEVGAAAARDGERLTEGRFALFS--- 109 Query 121 TPETTTASRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDVP 180 + ++D ++ P TA P + P + AE++Y +LTLAQLRARL +L + Sbjct 110 GEADAARASASDDTSAPSTAASPDA--------PEIVAEIEYESLTLAQLRARLTSLRLA 161 Query 181 ELEALLAYEQATKARAPFQTLLANRITRATAK 212 +LEALL+YE++TKARAP+QTLLANRITRA+AK Sbjct 162 DLEALLSYEESTKARAPYQTLLANRITRASAK 193 >gi|315443129|ref|YP_004076008.1| hypothetical protein Mspyr1_15020 [Mycobacterium sp. Spyr1] gi|315261432|gb|ADT98173.1| hypothetical protein Mspyr1_15020 [Mycobacterium sp. Spyr1] Length=194 Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 122/217 (57%), Positives = 152/217 (71%), Gaps = 28/217 (12%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 M+TAPYGVRLLVGAA A+EET KLP+TILMYPMT+ASQ A +VM+ QQ +A LVIKGD Sbjct 1 MSTAPYGVRLLVGAAVTAIEETRKLPQTILMYPMTIASQIAQLVMKMQQDVAVLVIKGDE 60 Query 61 TLETLFPPKDEKPEWATFDEDLP---DALEGTSIPLLGLSDASEAKNDDRRSDGRFALYS 117 TLET+FPPKDE+PEWATFDED D+ +G + L + D +R ++GRFAL+ Sbjct 61 TLETIFPPKDEQPEWATFDEDSGADRDSDDGADVVELPVRDG------ERLTEGRFALF- 113 Query 118 VSDTPETTTASRSADRSTNPKTAKHPKSAAKP--TVPTPAVAAELDYPALTLAQLRARLH 175 S +P+ K A P + P + AE++Y +LTLAQLRARL Sbjct 114 ----------------SGDPEVPKQDAPAETPAASADAPEIVAEIEYDSLTLAQLRARLT 157 Query 176 TLDVPELEALLAYEQATKARAPFQTLLANRITRATAK 212 +L VP+LEALLAYE++TKARAP+QTLLANRITRA+AK Sbjct 158 SLRVPDLEALLAYEESTKARAPYQTLLANRITRASAK 194 >gi|145222666|ref|YP_001133344.1| hypothetical protein Mflv_2078 [Mycobacterium gilvum PYR-GCK] gi|145215152|gb|ABP44556.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=201 Score = 221 bits (563), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 119/214 (56%), Positives = 150/214 (71%), Gaps = 15/214 (7%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 M+TAPYGVRLLVGAA A+EET KLP+TILMYPMT+ASQ A +VM+ QQ +A LVIKGD Sbjct 1 MSTAPYGVRLLVGAAVTAIEETRKLPQTILMYPMTVASQIAQLVMKMQQDVAVLVIKGDE 60 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 TLE++FPPKDE+PEWATFDED E +G ++ +R ++GRFAL+ Sbjct 61 TLESIFPPKDEQPEWATFDEDSGSDRESDDGGDVGDVVELPVRDGERLTEGRFALF---- 116 Query 121 TPETTTASRSADRSTNPKTAKHPKSAAKP--TVPTPAVAAELDYPALTLAQLRARLHTLD 178 S D + +P K A P + P + +E++Y +LTLAQLRARL +L Sbjct 117 ---------SGDFNGDPDVPKTDTPAETPAASADAPEIVSEIEYESLTLAQLRARLTSLR 167 Query 179 VPELEALLAYEQATKARAPFQTLLANRITRATAK 212 VP+LEALLAYE++TKARAP+QTLLANRITRA+AK Sbjct 168 VPDLEALLAYEESTKARAPYQTLLANRITRASAK 201 >gi|169628349|ref|YP_001701998.1| hypothetical protein MAB_1256c [Mycobacterium abscessus ATCC 19977] gi|169240316|emb|CAM61344.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=231 Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 116/241 (49%), Positives = 136/241 (57%), Gaps = 40/241 (16%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 M P+GVRLL+G A +EET KLP+ +L YPMT ASQ MRFQQ + EL IKGD Sbjct 1 MIRPPFGVRLLLGVAATVLEETRKLPQAVLTYPMTAASQTVQNFMRFQQTVTELAIKGDE 60 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKND--DRRSDGRFALYSV 118 E +FPP +E+PEWATFDEDL D L+ P + A+ D +R + GRFALYS Sbjct 61 AWENIFPPTEEQPEWATFDEDL-DELDA---PEHDETQATAVYEDAAERMTQGRFALYSS 116 Query 119 S-DTPETTTASRSADRSTNPKTAKH--------------------------PKSAAKPTV 151 PET +A +T P+TA P +A P Sbjct 117 EPAAPETESAP-----ATEPETAAEKAAPRKAPAKKAAAKKAPAKKAAPAVPAESADPNA 171 Query 152 PTPAVAAELDYPALTLAQLRARLHTLDVPELEALLAYEQATKARAPFQTLLANRITRATA 211 P V EL Y LTLAQLRARL L V ELE LLAYE A KARAP+QTLLANRITRA A Sbjct 172 PD--VVTELGYHDLTLAQLRARLQLLSVGELEELLAYEDAHKARAPYQTLLANRITRAAA 229 Query 212 K 212 + Sbjct 230 R 230 >gi|325676552|ref|ZP_08156230.1| hypothetical protein HMPREF0724_14013 [Rhodococcus equi ATCC 33707] gi|325552730|gb|EGD22414.1| hypothetical protein HMPREF0724_14013 [Rhodococcus equi ATCC 33707] Length=206 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 97/214 (46%), Positives = 123/214 (58%), Gaps = 16/214 (7%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 M P+ R+ G A A EE +KLP T + PMT SQ MR QQ + L IKGD Sbjct 7 MIRPPFMARVAAGVAITAYEEALKLPSTAMTLPMTAVSQVLQTTMRVQQSMTALAIKGDR 66 Query 61 TLETLFPPKDEKPEWATFDEDLPD-ALEGTSIPLLGLSDASEAKNDDRRSD-GRFALYSV 118 L +E+PEWA FDED D +G + + D+ A++ +RRS GRFALYS+ Sbjct 67 AF-CLLDRTEEEPEWAVFDEDRADFDTDGET----DVDDSDGAEDAERRSAPGRFALYSM 121 Query 119 SDTPETTTASRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLD 178 + + T A+ + + P T VP P +A ELDY ALTLAQLR+RL +L Sbjct 122 TPGEDETPATSAPAEESTPATGH---------VPVPEIAEELDYAALTLAQLRSRLRSLS 172 Query 179 VPELEALLAYEQATKARAPFQTLLANRITRATAK 212 V +L ALL YE+ T ARAPFQT+LANRIT A AK Sbjct 173 VDDLTALLEYEERTAARAPFQTMLANRITSARAK 206 >gi|226365340|ref|YP_002783123.1| hypothetical protein ROP_59310 [Rhodococcus opacus B4] gi|226243830|dbj|BAH54178.1| hypothetical protein [Rhodococcus opacus B4] Length=210 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 95/217 (44%), Positives = 111/217 (52%), Gaps = 20/217 (9%) Query 5 PYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDNTLET 64 P+ R+ G A AVEE KLP T PMT SQ MR QQ + L IKGD Sbjct 5 PFMARVAAGIAVTAVEEARKLPTTAATLPMTAVSQVLQTTMRVQQSMTALAIKGDQAFAL 64 Query 65 L-FPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVS---- 119 + + DE+P WA FDED+ A S A A + GRFALYS+S Sbjct 65 INWTHDDEQPVWAVFDEDVEPA-----------SGADGAAEERSAGPGRFALYSLSPQDD 113 Query 120 DTPETTTASRSADRSTNPKTAKHPKSAAKPTVPT----PAVAAELDYPALTLAQLRARLH 175 PE TA ++A +TN P S P +A LDY LTLAQLRARL Sbjct 114 GAPEKITAPKAAPVATNGAATTKPASTKPAAAKPAVAEPEIAVVLDYGTLTLAQLRARLR 173 Query 176 TLDVPELEALLAYEQATKARAPFQTLLANRITRATAK 212 +L V +L LL YE AT ARAPFQT+L NRIT A AK Sbjct 174 SLSVEDLTTLLDYENATLARAPFQTMLTNRITTAKAK 210 >gi|226307722|ref|YP_002767682.1| hypothetical protein RER_42350 [Rhodococcus erythropolis PR4] gi|226186839|dbj|BAH34943.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=201 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 91/209 (44%), Positives = 110/209 (53%), Gaps = 15/209 (7%) Query 5 PYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDNTLET 64 P+ R+ G A A+EE KLP T + PMT SQ MR QQ + L IKGD Sbjct 7 PFVARVAAGLAVTAMEEAKKLPTTAVALPMTAVSQMLQTSMRVQQSITSLAIKGDQAFAL 66 Query 65 L-FPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSDTPE 123 + + +DE+PEWA FDED DA P S D + GRFALYS+ T Sbjct 67 INWSSEDEQPEWAVFDEDA-DA------PADSASSTGSTTADTPTNAGRFALYSLEPTAP 119 Query 124 TTTASRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDVPELE 183 + A+ + T P P + ELDYP LTLAQLRAR+ TL + EL Sbjct 120 IEEPAPGAESESAAATTDGPAE-------EPEIVTELDYPNLTLAQLRARIRTLSIDELT 172 Query 184 ALLAYEQATKARAPFQTLLANRITRATAK 212 A+L YE AT ARAPFQT+L NRIT A AK Sbjct 173 AVLDYENATLARAPFQTMLTNRITTAKAK 201 >gi|333921059|ref|YP_004494640.1| hypothetical protein AS9A_3399 [Amycolicicoccus subflavus DQS3-9A1] gi|333483280|gb|AEF41840.1| hypothetical protein AS9A_3399 [Amycolicicoccus subflavus DQS3-9A1] Length=212 Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 92/215 (43%), Positives = 119/215 (56%), Gaps = 33/215 (15%) Query 5 PYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDNTLET 64 P+ R++ G A VEET +LP T PMT SQ MR QQ + EL IKGD L Sbjct 15 PFAARVMAGLAVTLVEETRRLPTTAATLPMTAVSQVLQTSMRVQQRMTELAIKGDEALAW 74 Query 65 LFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRS----------DGRFA 114 L+PP+D+ PEW +DE+ P+ A+ ++D+R++ GRFA Sbjct 75 LYPPEDQ-PEWVVYDEE----------PV-----ATTERSDERKAVAAGSSRSTVQGRFA 118 Query 115 LYSVSDTPETTTASRSADRSTNPKT-AKHPKSAAK-PTVPTPAVAAELDYPALTLAQLRA 172 LYS TAS +D T T A+ +SAA T PAVA +DY LTLAQLRA Sbjct 119 LYSAP-----VTASNGSDVETESITDAESSESAADDATSGVPAVAERIDYGTLTLAQLRA 173 Query 173 RLHTLDVPELEALLAYEQATKARAPFQTLLANRIT 207 RL L + +L ALL YE++ RAPFQT+L+NRIT Sbjct 174 RLRQLSIDDLTALLRYEESQFGRAPFQTMLSNRIT 208 >gi|229493867|ref|ZP_04387639.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229319144|gb|EEN84993.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=201 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 91/209 (44%), Positives = 110/209 (53%), Gaps = 15/209 (7%) Query 5 PYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDNTLET 64 P+ R+ G A A+EE KLP T + PMT SQ MR QQ + L IKGD Sbjct 7 PFVARVAAGLAVTAMEEAKKLPTTAVALPMTAVSQMLQTSMRVQQSITSLAIKGDQAFAL 66 Query 65 L-FPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSDTPE 123 + + +DE+PEWA FDED DA P S D + GRFALYS+ T Sbjct 67 INWSSEDEQPEWAVFDEDA-DA------PADSASTTGATTADTPTNAGRFALYSLEPTAP 119 Query 124 TTTASRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDVPELE 183 + A+ + T P P + ELDYP LTLAQLRAR+ TL + EL Sbjct 120 IEEPAPGAESESAAATTDGPAE-------EPEIVTELDYPNLTLAQLRARIRTLSIDELT 172 Query 184 ALLAYEQATKARAPFQTLLANRITRATAK 212 A+L YE AT ARAPFQT+L NRIT A AK Sbjct 173 AVLDYENATLARAPFQTMLTNRITTAKAK 201 >gi|111022832|ref|YP_705804.1| hypothetical protein RHA1_ro05869 [Rhodococcus jostii RHA1] gi|110822362|gb|ABG97646.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=259 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 97/223 (44%), Positives = 120/223 (54%), Gaps = 23/223 (10%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 M P+ R+ G A AVEE KLP T PMT SQ MR QQ + L IKGD Sbjct 49 MIRPPFVARVAAGIAVTAVEEARKLPTTAATLPMTAVSQVLQTTMRVQQSMTALAIKGDQ 108 Query 61 TLETL-FPPKDEKPEWATFDEDL-PDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSV 118 + + DE+P WA FD+D P+ + + G++D A GRFALYS+ Sbjct 109 AFALINWTHDDEQPAWAVFDDDTDPEPV------VDGVTDERPA------GPGRFALYSL 156 Query 119 S----DTPETTTASRSA-----DRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQ 169 S TPE + ++A + ST K A + + PTV P +A LDY LTLAQ Sbjct 157 SPQDESTPEKVSTPKAAPAAATNGSTPVKAASKKAATSAPTVAEPEIAVVLDYGTLTLAQ 216 Query 170 LRARLHTLDVPELEALLAYEQATKARAPFQTLLANRITRATAK 212 LRARL +L V +L LL YE AT ARAPFQT+L NRIT A AK Sbjct 217 LRARLRSLSVEDLTTLLDYENATLARAPFQTMLTNRITSAKAK 259 >gi|312138755|ref|YP_004006091.1| hypothetical protein REQ_13160 [Rhodococcus equi 103S] gi|311888094|emb|CBH47406.1| hypothetical protein REQ_13160 [Rhodococcus equi 103S] Length=171 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 85/185 (46%), Positives = 108/185 (59%), Gaps = 16/185 (8%) Query 30 LMYPMTLASQAAHVVMRFQQGLAELVIKGDNTLETLFPPKDEKPEWATFDEDLPD-ALEG 88 + PMT SQ MR QQ + L IKGD L +E+PEWA FDED D +G Sbjct 1 MTLPMTAVSQVLQTTMRVQQSMTALAIKGDRAF-CLLDRTEEEPEWAVFDEDRADFDTDG 59 Query 89 TSIPLLGLSDASEAKNDDRRSD-GRFALYSVSDTPETTTASRSADRSTNPKTAKHPKSAA 147 + + D+ A++ +RRS GRFALYS++ + T A+ + + P T Sbjct 60 ET----DVDDSDGAEDAERRSAPGRFALYSMTPGEDETPATSAPAEESAPATGH------ 109 Query 148 KPTVPTPAVAAELDYPALTLAQLRARLHTLDVPELEALLAYEQATKARAPFQTLLANRIT 207 VP P +A ELDY ALTLAQLR+RL +L V +L ALL YE+ T ARAPFQT+LANRIT Sbjct 110 ---VPVPEIAEELDYAALTLAQLRSRLRSLSVDDLTALLEYEERTAARAPFQTMLANRIT 166 Query 208 RATAK 212 A AK Sbjct 167 SARAK 171 >gi|262201634|ref|YP_003272842.1| hypothetical protein Gbro_1679 [Gordonia bronchialis DSM 43247] gi|262084981|gb|ACY20949.1| hypothetical protein Gbro_1679 [Gordonia bronchialis DSM 43247] Length=229 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 92/225 (41%), Positives = 119/225 (53%), Gaps = 23/225 (10%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 M APY R+ G A+EET KLP ++ PMT SQ MR QQ +AEL IKGD Sbjct 1 MVRAPYPARIAAGLIVTAIEETRKLPTLLVTLPMTAVSQTLQAGMRAQQNIAELAIKGDA 60 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEG---TSIPLLGLSDAS------EAKNDDRRSDG 111 LE +F E+P+WA FDED D L+ T DA+ E + D + G Sbjct 61 ALEMIFDKPSEQPQWARFDED--DDLDQQPPTRESPAAQDDATPESPAPEHNDVDTPAAG 118 Query 112 RFALYSVSDTPETTTASRSADRSTNPKTA--KHP-------KSAAKPTV-PTPAVAAELD 161 RFALYS + PE+ A S D T+ K P K+ AK + P P V ++ Sbjct 119 RFALYSSA--PESVVAGDSDDTGAGAVTSATKRPAKNTSAKKAPAKSSSGPAPEVVEYIE 176 Query 162 YPALTLAQLRARLHTLDVPELEALLAYEQATKARAPFQTLLANRI 206 Y LTLAQLRA+L ++ +L+ LL YE+ + RAPF T+L NRI Sbjct 177 YDGLTLAQLRAKLRSVGSEDLQELLDYEKTNRNRAPFVTMLDNRI 221 >gi|326381854|ref|ZP_08203547.1| hypothetical protein SCNU_02872 [Gordonia neofelifaecis NRRL B-59395] gi|326199280|gb|EGD56461.1| hypothetical protein SCNU_02872 [Gordonia neofelifaecis NRRL B-59395] Length=231 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 84/232 (37%), Positives = 108/232 (47%), Gaps = 38/232 (16%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 M+ PY R+ G V +EET +LP ++ PM+ S+ MR QQ +AEL IKGD Sbjct 1 MSRPPYPARVAAGLVVVTLEETRRLPTRVITLPMSAVSRTLQAGMRLQQNIAELAIKGDE 60 Query 61 TLETLFPPKDEKPEWATFDE------------DLPDALEGTSIPLLGLSD---------- 98 L L +E+PEWA FDE D P + + ++ Sbjct 61 FLAPLCDKSEEQPEWARFDEDEAPVDSEPLRADAPGTIPQAPARIAPVATKPAKKSQVTK 120 Query 99 ----ASEAKNDDRRSDGRFALYSVSDTPETTTASRSADRSTNPKTAKHPKSAAKPTVPTP 154 A EA + + GRFALYS SA P T P A P P Sbjct 121 PAEAAGEAPVNGTVATGRFALYS------------SAPADVAPGTTAAPADADDSGEPLP 168 Query 155 AVAAELDYPALTLAQLRARLHTLDVPELEALLAYEQATKARAPFQTLLANRI 206 A LDYP LTLAQLRA++ +L EL LLA+E+A + R PF T+L NRI Sbjct 169 AAVEALDYPNLTLAQLRAKVRSLSTDELGELLAFEKAGRNRTPFVTMLDNRI 220 >gi|343925119|ref|ZP_08764651.1| hypothetical protein GOALK_033_01100 [Gordonia alkanivorans NBRC 16433] gi|343765050|dbj|GAA11577.1| hypothetical protein GOALK_033_01100 [Gordonia alkanivorans NBRC 16433] Length=261 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 94/252 (38%), Positives = 115/252 (46%), Gaps = 47/252 (18%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 M APY R+ G A+EET KLP ++ PMT SQ MR QQ +AEL IKGD Sbjct 1 MDRAPYPARIAAGLIVTALEETRKLPALLVTLPMTAVSQTLQAGMRAQQNIAELAIKGDA 60 Query 61 TLETLFPPKDEKPEWATFDED------LPDALEGTSIPL---LGLSDASEAKNDDR---- 107 L LF E+P WA FDED DA G +P+ + D EA D Sbjct 61 ALGMLFDKPSEQPAWARFDEDDETPEPGADAHAG-DVPIEKPTSIVDEVEAAADGNDPGD 119 Query 108 ------------------RSDGRFALYSV----SD----TPETTTASRSADRSTNPK--- 138 R+ G V SD P A R A S+ P+ Sbjct 120 QPGEAVTSTKPAKVTKATRTGGATKTTEVDAEASDADLAAPPRADAGRFALYSSAPEDVV 179 Query 139 TAKHPKSAAKPTVPTPAVAAE----LDYPALTLAQLRARLHTLDVPELEALLAYEQATKA 194 A K A + P A E +DY LTLAQLRARL T+D +LE+L+ YE+A + Sbjct 180 DAAEKKPATRADKPKNGAAPEIVVLIDYDTLTLAQLRARLRTVDTDDLESLVDYEKANRG 239 Query 195 RAPFQTLLANRI 206 RAPF T+L NRI Sbjct 240 RAPFVTMLENRI 251 >gi|54026770|ref|YP_121012.1| hypothetical protein nfa47960 [Nocardia farcinica IFM 10152] gi|54018278|dbj|BAD59648.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=232 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 83/243 (35%), Positives = 109/243 (45%), Gaps = 50/243 (20%) Query 5 PYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDNTLET 64 P+ R+ GAA A+EET +LP + +P+T SQ M QQ + L +KGD + Sbjct 5 PFLARVAAGAAVYALEETRRLPTAAMNFPITAISQILQTSMHVQQFVTSLALKGDAVFDR 64 Query 65 LFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSDTPET 124 L E+PEWATFDEDL D G G A+ A RF LY+ +D P + Sbjct 65 LSHTTQEQPEWATFDEDLTDQQTG------GNEFAAWAS--------RFDLYT-ADEPAS 109 Query 125 TTASRSADRSTNPK------------TAKHPKSAAKPTVPTPAVAA-------------- 158 + ST + TA P + +P + A Sbjct 110 GNGHHNGSDSTAQRAGSDEQPATAVDTADAPSESEEPQLSVVPEAEVVEAEAAEPEAAEP 169 Query 159 ---------ELDYPALTLAQLRARLHTLDVPELEALLAYEQATKARAPFQTLLANRITRA 209 DY +TLAQLRARL L V +L+ALL YEQ T+ARA F T+L NRI Sbjct 170 EVEEPEVAKRYDYATMTLAQLRARLRMLTVEDLQALLDYEQRTQARAAFVTMLTNRIATV 229 Query 210 TAK 212 A+ Sbjct 230 QAQ 232 >gi|296140798|ref|YP_003648041.1| hypothetical protein Tpau_3115 [Tsukamurella paurometabola DSM 20162] gi|296028932|gb|ADG79702.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=205 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 90/229 (40%), Positives = 120/229 (53%), Gaps = 45/229 (19%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 M+ P+ +R+ VGA +A E+ ++ P+TL S++A +R QQ LAEL ++GD Sbjct 1 MSRLPFVLRVAVGAVALAAEKGQEIATGAASAPITLGSKSAQAFIRVQQDLAELAVRGDA 60 Query 61 TLETLFPPK-DEKPEWATFDEDL---------PDALEGTSIPLLGLSDASEAKNDDRRS- 109 TLETLFPPK +E+P WATFD+D P A GT P A+E D +S Sbjct 61 TLETLFPPKAEEQPAWATFDDDEDLDVDLPAPPTAPFGTVRP------ATEKAADTAQSP 114 Query 110 ----------DGRFALYSVSDTPETTTASRSADRSTNPKTAKHPKSAAKPTVPTPAVAAE 159 GR+ALYS +P T + P TA + P Sbjct 115 EQPEETAPSGTGRYALYS---SPAPTPG------DSGPDTAD---------LDLPDAVRR 156 Query 160 LDYPALTLAQLRARLHTLDVPELEALLAYEQATKARAPFQTLLANRITR 208 +DYP LTLAQLR RL +L +L ALLA+E+ KARAPF T+L NR+ R Sbjct 157 IDYPELTLAQLRGRLTSLSHDDLAALLAFEREHKARAPFLTMLENRLNR 205 >gi|257057117|ref|YP_003134949.1| hypothetical protein Svir_31490 [Saccharomonospora viridis DSM 43017] gi|256586989|gb|ACU98122.1| hypothetical protein Svir_31490 [Saccharomonospora viridis DSM 43017] Length=186 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/207 (36%), Positives = 95/207 (46%), Gaps = 33/207 (15%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 M P+ +R+ G A E LP+ +L P+T+ASQ V MR QQ + EL IKGDN Sbjct 1 MKHVPFPLRVAAGLAVTTAERARGLPKQLLELPITVASQVLQVSMRVQQHVTELAIKGDN 60 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 L L P +E PEWATFDEDL + + A + DD ++ AL +D Sbjct 61 ALAALRRP-EETPEWATFDEDLDEGFDDR------FDSARNGEQDDPWAEEERAL--AAD 111 Query 121 TPETTTASRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDVP 180 E S P P A Y LTL Q+RARL +L +P Sbjct 112 HVEGEFDS--------------------PEAP----AGMAGYDELTLPQVRARLRSLSLP 147 Query 181 ELEALLAYEQATKARAPFQTLLANRIT 207 +LE LLAYE+ R F +L RI Sbjct 148 QLEELLAYEREHANRPSFVGMLTRRIN 174 >gi|302530083|ref|ZP_07282425.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302438978|gb|EFL10794.1| conserved hypothetical protein [Streptomyces sp. AA4] Length=206 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 74/209 (36%), Positives = 98/209 (47%), Gaps = 17/209 (8%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 M P +R+ G A E +LP+ + P+T+ SQ + MR QQ + EL IKGD+ Sbjct 1 MKPLPLPLRVAAGLAVTTAERVRELPKQLTGLPVTVVSQVLQLSMRVQQQVTELAIKGDD 60 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 L L P +D P WATFDED + L+ + D E + + R + Sbjct 61 ALSMLRPVED-TPSWATFDEDAEPEFTPSRPTLVPVDDLPEPRTNGHR----------VE 109 Query 121 TPETTTASRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDVP 180 PET + T +HP + P A +Y LTL QLRARL L VP Sbjct 110 PPETIDDPWVEE--TRALGEEHPDGENDSSGP----AGLGNYDELTLPQLRARLRRLTVP 163 Query 181 ELEALLAYEQATKARAPFQTLLANRITRA 209 +LE LL YE+A RA F +LA RI A Sbjct 164 QLEELLEYEKANADRASFVGMLARRIGNA 192 >gi|331694830|ref|YP_004331069.1| hypothetical protein Psed_0964 [Pseudonocardia dioxanivorans CB1190] gi|326949519|gb|AEA23216.1| hypothetical protein Psed_0964 [Pseudonocardia dioxanivorans CB1190] Length=216 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 81/230 (36%), Positives = 103/230 (45%), Gaps = 36/230 (15%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 M P VR+ G AVE+ LPR + P+T SQA V MR QQ + EL IKGD Sbjct 1 MKPLPMPVRIAAGLVATAVEQARDLPRLVTELPVTAVSQALQVSMRVQQRVTELAIKGDR 60 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 L L P E P WATFD++ P + G S+ + GR ++ Sbjct 61 ALGALR-PVPETPSWATFDDEEPATVNGASVTSM---------------RGRATFDDDTE 104 Query 121 TPETTTASRSADRSTN--------PKTAKHPKSAAKPTVPTPA-----VAAELDYPA--- 164 +T A+ S +T P + P AA P A AAE D PA Sbjct 105 DDDTEPAAGSTGGTTGELTGGSTLPADPEDPIVAADPATEVAAETIRDAAAEDDGPAVLP 164 Query 165 ----LTLAQLRARLHTLDVPELEALLAYEQATKARAPFQTLLANRITRAT 210 +T+ QLR RL LDV EL ALL +E + R P+ T+L NRI T Sbjct 165 GYAGMTIPQLRGRLRALDVDELRALLQWEISHGNRPPYVTMLGNRIVTMT 214 >gi|324997964|ref|ZP_08119076.1| hypothetical protein PseP1_04326 [Pseudonocardia sp. P1] Length=203 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 82/216 (38%), Positives = 109/216 (51%), Gaps = 30/216 (13%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 M+ P+ VR+ G AVE+ +LPR + P+T SQA V MR QQ + EL IKGD Sbjct 1 MSPLPFPVRIAAGLVVTAVEQARELPRHAVELPVTAVSQALQVSMRLQQTVTELAIKGDR 60 Query 61 TLETLFPPKDEKPEWATFDEDLPD----ALEGTSIPLLGLSDASEAKNDDRRSDGRFALY 116 L L P D+ P WATFD+DL D E + PL ++S A D +G Sbjct 61 ALGALR-PADDVPNWATFDDDLADLRLPEAEPIAPPL--PPESSSATPGDGPRNG----- 112 Query 117 SVSDTPETTTASRSA---DRSTNPKTAKH---PKSAAKPTVPTPAVAAELDYPALTLAQL 170 SVS T SRS +R P TA + + A VP +YP +T+ QL Sbjct 113 SVS----TLRPSRSGIPIERPGRPATASNRAEAAAGAPQAVP--------EYPTMTVPQL 160 Query 171 RARLHTLDVPELEALLAYEQATKARAPFQTLLANRI 206 R ++ L + +L LLA+E A + R PF T+L NRI Sbjct 161 RGKMRALSLDDLSDLLAWETAHENRPPFVTMLTNRI 196 >gi|256374877|ref|YP_003098537.1| hypothetical protein Amir_0728 [Actinosynnema mirum DSM 43827] gi|255919180|gb|ACU34691.1| hypothetical protein Amir_0728 [Actinosynnema mirum DSM 43827] Length=209 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 74/211 (36%), Positives = 105/211 (50%), Gaps = 14/211 (6%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 M P VRL G A AVE+ KLP + P+T+ S+A + MR QQ + EL I+GD+ Sbjct 1 MKQLPLPVRLAAGLAVTAVEQARKLPGQLAGLPVTVVSEALQLSMRVQQTVTELAIRGDD 60 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 L L + E PEWA FDED DA P A+ A + R A ++ Sbjct 61 VLAGLRTVEQE-PEWAVFDEDEADA------PPRTAPSAAPAAKTPSEQERRSAAEGIAK 113 Query 121 TPETTTASRSADRSTNPKTAKHPKSAAKPTVPTPAVAAEL-----DYPALTLAQLRARLH 175 T A+ AD +N + S A+AAE +Y +++L QLRA+L Sbjct 114 VAAATGAADPAD--SNADDDQGDDSGDPWAREERALAAESPTALPEYDSMSLPQLRAKLR 171 Query 176 TLDVPELEALLAYEQATKARAPFQTLLANRI 206 +L +LE LLA+E+A ++R F +LA R+ Sbjct 172 SLSEDDLEQLLAHERAHESRPEFTGMLARRL 202 >gi|134097536|ref|YP_001103197.1| hypothetical protein SACE_0938 [Saccharopolyspora erythraea NRRL 2338] gi|133910159|emb|CAM00272.1| hypothetical protein SACE_0938 [Saccharopolyspora erythraea NRRL 2338] Length=154 Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 67/212 (32%), Positives = 89/212 (42%), Gaps = 58/212 (27%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 M + P VR+ G A AVE+T +LP T+L P+T+ SQA V MR QQ + EL IKGD Sbjct 1 MRSFPLPVRVAAGLAATAVEQTRQLPATLLGLPVTVVSQALQVSMRVQQQITELAIKGDE 60 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 L L +E+P W TF Sbjct 61 ALAGLRT-YEEQPAWVTF------------------------------------------ 77 Query 121 TPETTTASRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDVP 180 D P + P +AA P T +A DY ++L QLR RL + Sbjct 78 -----------DEDEEPAAPQRPSTAA-PEEETSLLA---DYDRMSLPQLRGRLRSYTEA 122 Query 181 ELEALLAYEQATKARAPFQTLLANRITRATAK 212 EL LL +EQA + R F +LANR+ R ++ Sbjct 123 ELAELLEHEQAHENRPEFVRMLANRLERVRSQ 154 >gi|291009728|ref|ZP_06567701.1| hypothetical protein SeryN2_34875 [Saccharopolyspora erythraea NRRL 2338] Length=160 Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 67/212 (32%), Positives = 89/212 (42%), Gaps = 58/212 (27%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 M + P VR+ G A AVE+T +LP T+L P+T+ SQA V MR QQ + EL IKGD Sbjct 7 MRSFPLPVRVAAGLAATAVEQTRQLPATLLGLPVTVVSQALQVSMRVQQQITELAIKGDE 66 Query 61 TLETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDDRRSDGRFALYSVSD 120 L L +E+P W TF Sbjct 67 ALAGLRT-YEEQPAWVTF------------------------------------------ 83 Query 121 TPETTTASRSADRSTNPKTAKHPKSAAKPTVPTPAVAAELDYPALTLAQLRARLHTLDVP 180 D P + P +AA P T +A DY ++L QLR RL + Sbjct 84 -----------DEDEEPAAPQRPSTAA-PEEETSLLA---DYDRMSLPQLRGRLRSYTEA 128 Query 181 ELEALLAYEQATKARAPFQTLLANRITRATAK 212 EL LL +EQA + R F +LANR+ R ++ Sbjct 129 ELAELLEHEQAHENRPEFVRMLANRLERVRSQ 160 >gi|300789869|ref|YP_003770160.1| hypothetical protein AMED_8055 [Amycolatopsis mediterranei U32] gi|299799383|gb|ADJ49758.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340531540|gb|AEK46745.1| hypothetical protein RAM_41390 [Amycolatopsis mediterranei S699] Length=250 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/81 (44%), Positives = 45/81 (56%), Gaps = 1/81 (1%) Query 1 MATAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDN 60 M P +R+ G A E +LPR + P+T+ SQ MR QQ + EL IKGD+ Sbjct 1 MKPFPLPLRVAAGLAVSTAERVRELPRQLAGLPVTVVSQVLQASMRVQQHVTELAIKGDS 60 Query 61 TLETLFPPKDEKPEWATFDED 81 L +L P +D P WATFDED Sbjct 61 ALSSLRPIED-TPSWATFDED 80 >gi|296393509|ref|YP_003658393.1| hypothetical protein Srot_1089 [Segniliparus rotundus DSM 44985] gi|296180656|gb|ADG97562.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985] Length=298 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/82 (41%), Positives = 44/82 (54%), Gaps = 5/82 (6%) Query 20 EETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDNTLETLFPPKDEKPEWATFD 79 +E K+P + P+ + A +R QQ LVIKGD TL+ +F +EKP WATFD Sbjct 44 DEIKKIPVNLASLPVQAVTNAVSSALRLQQNFNSLVIKGDETLDLIFQKPEEKPSWATFD 103 Query 80 EDLPDALEGTSIPLLGLSDASE 101 ED E IP L+DA + Sbjct 104 ED-----EDDEIPPPALADAEQ 120 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/95 (45%), Positives = 55/95 (58%), Gaps = 11/95 (11%) Query 122 PETTTASRSADRSTNPKTAKHPKSAAKPTVPT-----PAVAAELDYPALTLAQLRARLHT 176 P+++TA R++ PK + PKS A T P P + L+Y L+LAQLRAR Sbjct 210 PKSSTA-----RTSEPKLS-EPKSQAPTTAPASRGNRPELVEYLEYETLSLAQLRARARN 263 Query 177 LDVPELEALLAYEQATKARAPFQTLLANRITRATA 211 L VPEL LL++E+ R PF TLL NRIT + A Sbjct 264 LSVPELRELLSFERDNDNRPPFITLLENRITTSEA 298 >gi|317506621|ref|ZP_07964412.1| hypothetical protein HMPREF9336_00782 [Segniliparus rugosus ATCC BAA-974] gi|316255053|gb|EFV14332.1| hypothetical protein HMPREF9336_00782 [Segniliparus rugosus ATCC BAA-974] Length=288 Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 40/86 (47%), Positives = 50/86 (59%), Gaps = 5/86 (5%) Query 131 ADRSTNPKTAKHPK----SAAKPTVPT-PAVAAELDYPALTLAQLRARLHTLDVPELEAL 185 A ++ PK PK AA+P P P + L+Y L+LAQLRAR L VPEL L Sbjct 203 APKAVEPKKPAEPKPEAPKAAEPGKPGRPELVDYLEYETLSLAQLRARARNLSVPELHEL 262 Query 186 LAYEQATKARAPFQTLLANRITRATA 211 L++E+A R PF TLL NRIT + A Sbjct 263 LSFERANGNRPPFVTLLENRITASGA 288 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/62 (46%), Positives = 36/62 (59%), Gaps = 0/62 (0%) Query 20 EETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDNTLETLFPPKDEKPEWATFD 79 +E K+P + P+ + A +R QQ LVIKGD TLE +F +EKP WATFD Sbjct 27 DEIKKIPSNLASIPVQAVTDAVSSALRLQQNFNALVIKGDETLEFIFHKPEEKPAWATFD 86 Query 80 ED 81 ED Sbjct 87 ED 88 >gi|319950221|ref|ZP_08024148.1| hypothetical protein ES5_11641 [Dietzia cinnamea P4] gi|319436125|gb|EFV91318.1| hypothetical protein ES5_11641 [Dietzia cinnamea P4] Length=129 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/105 (34%), Positives = 51/105 (49%), Gaps = 7/105 (6%) Query 9 RLLVGAATVAVEETMKLP-------RTILMYPMTLASQAAHVVMRFQQGLAELVIKGDNT 61 R +G A A E + LP T+ P+ +A + Q L +L +KGD Sbjct 9 RASIGLAATAAERVVALPGRAIEAVSTLPGVPVRVAGGLVQSYLHAGQTLTDLAVKGDRV 68 Query 62 LETLFPPKDEKPEWATFDEDLPDALEGTSIPLLGLSDASEAKNDD 106 L ++FP + ++PEWATFDED + + S + G S AS DD Sbjct 69 LASVFPARSDQPEWATFDEDETEEVLDVSYRVYGSSRASRGAGDD 113 >gi|284989585|ref|YP_003408139.1| hypothetical protein Gobs_1007 [Geodermatophilus obscurus DSM 43160] gi|284062830|gb|ADB73768.1| hypothetical protein Gobs_1007 [Geodermatophilus obscurus DSM 43160] Length=519 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/79 (37%), Positives = 44/79 (56%), Gaps = 2/79 (2%) Query 5 PYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDNTLET 64 P VR +VG A +++T++LPRT+ P+ + A M+ QQ + LV +GD Sbjct 6 PQVVRAVVGLAATVLDDTLQLPRTLPGLPVRVLGLAMQATMKLQQHYSGLVARGDEVFTG 65 Query 65 LFPPKDEKPEWATFDEDLP 83 L + +P ATFDED+P Sbjct 66 LR--GEAEPGLATFDEDMP 82 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/47 (43%), Positives = 31/47 (66%), Gaps = 0/47 (0%) Query 162 YPALTLAQLRARLHTLDVPELEALLAYEQATKARAPFQTLLANRITR 208 Y + T+AQLR RL + + L+AYE+AT+AR P+ +L NR+ + Sbjct 457 YDSFTVAQLRGRLRGYQLATVADLVAYEEATRAREPYLRMLRNRLEK 503 >gi|258654508|ref|YP_003203664.1| hypothetical protein Namu_4388 [Nakamurella multipartita DSM 44233] gi|258557733|gb|ACV80675.1| hypothetical protein Namu_4388 [Nakamurella multipartita DSM 44233] Length=329 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/45 (58%), Positives = 33/45 (74%), Gaps = 0/45 (0%) Query 162 YPALTLAQLRARLHTLDVPELEALLAYEQATKARAPFQTLLANRI 206 Y A+TLAQ+R L L V ++ LLAYEQA + RAPF TLL+NR+ Sbjct 277 YDAMTLAQVRGHLRELSVADVTDLLAYEQAGENRAPFLTLLSNRL 321 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/82 (36%), Positives = 39/82 (48%), Gaps = 1/82 (1%) Query 3 TAPYGVRLLVGAATVAVEETMKLPRTILMYPMTLASQAAHVVMRFQQGLAELVIKGDNTL 62 T P VR+ G ++ LP I P+TL A + M+ QQ + L +GD L Sbjct 23 TLPLPVRVAAGLLVTGIQLVRSLPEEIPGIPVTLVGNAMRLSMKVQQEITTLATRGDELL 82 Query 63 ETLFPPK-DEKPEWATFDEDLP 83 + + E P WATFDED P Sbjct 83 GGIIGGRAQENPSWATFDEDKP 104 >gi|134099819|ref|YP_001105480.1| hypothetical protein SACE_3280 [Saccharopolyspora erythraea NRRL 2338] gi|291006146|ref|ZP_06564119.1| hypothetical protein SeryN2_16638 [Saccharopolyspora erythraea NRRL 2338] gi|133912442|emb|CAM02555.1| hypothetical protein SACE_3280 [Saccharopolyspora erythraea NRRL 2338] Length=113 Score = 38.5 bits (88), Expect = 0.62, Method: Compositional matrix adjust. Identities = 18/46 (40%), Positives = 26/46 (57%), Gaps = 0/46 (0%) Query 161 DYPALTLAQLRARLHTLDVPELEALLAYEQATKARAPFQTLLANRI 206 DY L + QLR R+ +L ++ LL +EQ R P + LL NR+ Sbjct 10 DYDELPIGQLRHRIRSLQPDQVRELLEHEQRHAHRLPVEELLTNRL 55 >gi|72160874|ref|YP_288531.1| hypothetical protein Tfu_0470 [Thermobifida fusca YX] gi|71914606|gb|AAZ54508.1| hypothetical protein Tfu_0470 [Thermobifida fusca YX] Length=226 Score = 38.1 bits (87), Expect = 0.83, Method: Compositional matrix adjust. Identities = 23/55 (42%), Positives = 30/55 (55%), Gaps = 0/55 (0%) Query 154 PAVAAELDYPALTLAQLRARLHTLDVPELEALLAYEQATKARAPFQTLLANRITR 208 PA A +Y +LTL +RARL L V ++ L AYE A R F + NRI + Sbjct 164 PAEAPLPNYDSLTLPSVRARLRKLTVDQVRQLRAYEAAHANRPEFVRMFDNRIKK 218 >gi|271969672|ref|YP_003343868.1| hypothetical protein Sros_8481 [Streptosporangium roseum DSM 43021] gi|270512847|gb|ACZ91125.1| hypothetical protein Sros_8481 [Streptosporangium roseum DSM 43021] Length=386 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/47 (41%), Positives = 27/47 (58%), Gaps = 0/47 (0%) Query 162 YPALTLAQLRARLHTLDVPELEALLAYEQATKARAPFQTLLANRITR 208 Y LT+A LRAR+ ++ LAYE+AT ARA + NR+ + Sbjct 335 YGQLTVASLRARMRGKTAGQIREFLAYERATTARAEVVRMYENRLAK 381 >gi|315444063|ref|YP_004076942.1| hypothetical protein Mspyr1_24670 [Mycobacterium sp. Spyr1] gi|315262366|gb|ADT99107.1| hypothetical protein Mspyr1_24670 [Mycobacterium sp. Spyr1] Length=78 Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust. Identities = 20/46 (44%), Positives = 25/46 (55%), Gaps = 0/46 (0%) Query 161 DYPALTLAQLRARLHTLDVPELEALLAYEQATKARAPFQTLLANRI 206 DY LTL L+ RL LD +L A+L YE AR P +L R+ Sbjct 8 DYDQLTLGDLQHRLRGLDEEQLTAVLTYEAGHAARVPVLQILEARL 53 Lambda K H 0.313 0.127 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 252352077426 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40