BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1112

Length=357
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15608252|ref|NP_215628.1|  GTP-dependent nucleic acid-binding ...   712    0.0   
gi|31792305|ref|NP_854798.1|  GTP-dependent nucleic acid-binding ...   711    0.0   
gi|323720393|gb|EGB29487.1|  GTP-binding protein [Mycobacterium t...   709    0.0   
gi|308231740|ref|ZP_07663918.1|  GTP binding protein [Mycobacteri...   698    0.0   
gi|41408780|ref|NP_961616.1|  translation-associated GTPase [Myco...   654    0.0   
gi|254774116|ref|ZP_05215632.1|  GTP-dependent nucleic acid-bindi...   627    7e-178
gi|240171089|ref|ZP_04749748.1|  translation-associated GTPase [M...   627    1e-177
gi|342861701|ref|ZP_08718347.1|  GTP-binding protein YchF [Mycoba...   621    5e-176
gi|296169978|ref|ZP_06851585.1|  GTP-dependent nucleic acid-bindi...   621    6e-176
gi|183984324|ref|YP_001852615.1|  GTP binding protein [Mycobacter...   616    2e-174
gi|118462264|ref|YP_880478.1|  GTP-dependent nucleic acid-binding...   615    3e-174
gi|118616059|ref|YP_904391.1|  GTP-dependent nucleic acid-binding...   613    2e-173
gi|15828041|ref|NP_302304.1|  GTP-dependent nucleic acid-binding ...   611    6e-173
gi|336441038|gb|AEI54744.1|  GTP-dependent nucleic acid-binding p...   607    7e-172
gi|254819700|ref|ZP_05224701.1|  GTP-dependent nucleic acid-bindi...   598    4e-169
gi|120405577|ref|YP_955406.1|  GTP-dependent nucleic acid-binding...   596    2e-168
gi|315443132|ref|YP_004076011.1|  GTP-binding protein YchF [Mycob...   595    4e-168
gi|145222670|ref|YP_001133348.1|  GTP-dependent nucleic acid-bind...   594    6e-168
gi|118472879|ref|YP_889468.1|  GTP-dependent nucleic acid-binding...   594    6e-168
gi|108801066|ref|YP_641263.1|  GTP-dependent nucleic acid-binding...   593    1e-167
gi|126436904|ref|YP_001072595.1|  GTP-dependent nucleic acid-bind...   592    3e-167
gi|336441042|gb|AEI54746.1|  GTP-dependent nucleic acid-binding p...   589    3e-166
gi|336441044|gb|AEI54747.1|  GTP-dependent nucleic acid-binding p...   588    4e-166
gi|169628359|ref|YP_001702008.1|  GTP-dependent nucleic acid-bind...   587    8e-166
gi|333989702|ref|YP_004522316.1|  GTP binding protein [Mycobacter...   587    9e-166
gi|339294106|gb|AEJ46217.1|  GTP-dependent nucleic acid-binding p...   585    4e-165
gi|333921051|ref|YP_004494632.1|  GTP-binding protein YchF [Amyco...   582    4e-164
gi|312138768|ref|YP_004006104.1|  gtpase [Rhodococcus equi 103S] ...   565    4e-159
gi|134097557|ref|YP_001103218.1|  GTP-dependent nucleic acid-bind...   553    1e-155
gi|54026759|ref|YP_121001.1|  GTP-dependent nucleic acid-binding ...   551    5e-155
gi|302530075|ref|ZP_07282417.1|  translation-associated GTPase [S...   550    1e-154
gi|257057108|ref|YP_003134940.1|  GTP-dependent nucleic acid-bind...   548    5e-154
gi|331694837|ref|YP_004331076.1|  GTP-binding protein YchF [Pseud...   536    2e-150
gi|256374885|ref|YP_003098545.1|  GTP-dependent nucleic acid-bind...   533    1e-149
gi|326381379|ref|ZP_08203073.1|  GTP-binding protein YchF [Gordon...   533    2e-149
gi|226365350|ref|YP_002783133.1|  GTP-dependent nucleic acid-bind...   532    4e-149
gi|300789861|ref|YP_003770152.1|  translation-associated GTPase [...   530    1e-148
gi|262203275|ref|YP_003274483.1|  GTP-binding protein YchF [Gordo...   530    1e-148
gi|111022842|ref|YP_705814.1|  GTP-dependent nucleic acid-binding...   528    4e-148
gi|172040303|ref|YP_001800017.1|  GTP-dependent nucleic acid-bind...   525    5e-147
gi|296140787|ref|YP_003648030.1|  GTP-binding protein YchF [Tsuka...   524    1e-146
gi|258654485|ref|YP_003203641.1|  GTP-dependent nucleic acid-bind...   523    2e-146
gi|226307711|ref|YP_002767671.1|  GTP-binding protein [Rhodococcu...   521    5e-146
gi|229493951|ref|ZP_04387723.1|  GTP-binding protein YchF [Rhodoc...   521    6e-146
gi|260577667|ref|ZP_05845603.1|  GTP-dependent nucleic acid-bindi...   521    9e-146
gi|324997182|ref|ZP_08118294.1|  GTP-binding protein YchF [Pseudo...   520    1e-145
gi|68536530|ref|YP_251235.1|  translation-associated GTPase [Cory...   520    2e-145
gi|336326131|ref|YP_004606097.1|  hypothetical protein CRES_1581 ...   518    7e-145
gi|116671377|ref|YP_832310.1|  GTP-dependent nucleic acid-binding...   516    3e-144
gi|237785196|ref|YP_002905901.1|  GTP-dependent nucleic acid-bind...   515    5e-144


>gi|15608252|ref|NP_215628.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
tuberculosis H37Rv]
 gi|15840549|ref|NP_335586.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
tuberculosis CDC1551]
 gi|148660898|ref|YP_001282421.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
tuberculosis H37Ra]
 46 more sequence titles
 
gi|148822325|ref|YP_001287079.1| translation-associated GTPase [Mycobacterium tuberculosis F11]
 gi|167969247|ref|ZP_02551524.1| translation-associated GTPase [Mycobacterium tuberculosis H37Ra]
 gi|253799848|ref|YP_003032849.1| GTP binding protein [Mycobacterium tuberculosis KZN 1435]
 gi|254231390|ref|ZP_04924717.1| hypothetical protein TBCG_01097 [Mycobacterium tuberculosis C]
 gi|254364019|ref|ZP_04980065.1| hypothetical GTP binding protein [Mycobacterium tuberculosis 
str. Haarlem]
 gi|254550110|ref|ZP_05140557.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
tuberculosis '98-R604 INH-RIF-EM']
 gi|289442542|ref|ZP_06432286.1| GTP-binding protein YchF [Mycobacterium tuberculosis T46]
 gi|289446702|ref|ZP_06436446.1| GTP binding protein [Mycobacterium tuberculosis CPHL_A]
 gi|289555101|ref|ZP_06444311.1| GTP binding protein [Mycobacterium tuberculosis KZN 605]
 gi|289569105|ref|ZP_06449332.1| GTP binding protein [Mycobacterium tuberculosis T17]
 gi|289744855|ref|ZP_06504233.1| translation-associated GTPase [Mycobacterium tuberculosis 02_1987]
 gi|289749648|ref|ZP_06509026.1| GTP binding protein [Mycobacterium tuberculosis T92]
 gi|289753178|ref|ZP_06512556.1| translation-associated GTPase [Mycobacterium tuberculosis EAS054]
 gi|289757201|ref|ZP_06516579.1| translation-associated GTPase [Mycobacterium tuberculosis T85]
 gi|289761252|ref|ZP_06520630.1| translation-associated GTPase [Mycobacterium tuberculosis GM 
1503]
 gi|294993294|ref|ZP_06798985.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
tuberculosis 210]
 gi|297633652|ref|ZP_06951432.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
tuberculosis KZN 4207]
 gi|297730639|ref|ZP_06959757.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
tuberculosis KZN R506]
 gi|298524609|ref|ZP_07012018.1| translation-associated GTPase [Mycobacterium tuberculosis 94_M4241A]
 gi|306806980|ref|ZP_07443648.1| GTP binding protein [Mycobacterium tuberculosis SUMu007]
 gi|307083662|ref|ZP_07492775.1| GTP binding protein [Mycobacterium tuberculosis SUMu012]
 gi|313657969|ref|ZP_07814849.1| GTP-binding protein YchF [Mycobacterium tuberculosis KZN V2475]
 gi|340626126|ref|YP_004744578.1| putative GTP binding protein [Mycobacterium canettii CIPT 140010059]
 gi|3256023|emb|CAA17228.1| Probable GTP binding protein [Mycobacterium tuberculosis H37Rv]
 gi|13880727|gb|AAK45400.1| GTP-binding protein [Mycobacterium tuberculosis CDC1551]
 gi|124600449|gb|EAY59459.1| hypothetical protein TBCG_01097 [Mycobacterium tuberculosis C]
 gi|134149533|gb|EBA41578.1| hypothetical GTP binding protein [Mycobacterium tuberculosis 
str. Haarlem]
 gi|148505050|gb|ABQ72859.1| GTP-binding protein [Mycobacterium tuberculosis H37Ra]
 gi|148720852|gb|ABR05477.1| hypothetical GTP binding protein [Mycobacterium tuberculosis 
F11]
 gi|253321351|gb|ACT25954.1| GTP binding protein [Mycobacterium tuberculosis KZN 1435]
 gi|289415461|gb|EFD12701.1| GTP-binding protein YchF [Mycobacterium tuberculosis T46]
 gi|289419660|gb|EFD16861.1| GTP binding protein [Mycobacterium tuberculosis CPHL_A]
 gi|289439733|gb|EFD22226.1| GTP binding protein [Mycobacterium tuberculosis KZN 605]
 gi|289542859|gb|EFD46507.1| GTP binding protein [Mycobacterium tuberculosis T17]
 gi|289685383|gb|EFD52871.1| translation-associated GTPase [Mycobacterium tuberculosis 02_1987]
 gi|289690235|gb|EFD57664.1| GTP binding protein [Mycobacterium tuberculosis T92]
 gi|289693765|gb|EFD61194.1| translation-associated GTPase [Mycobacterium tuberculosis EAS054]
 gi|289708758|gb|EFD72774.1| translation-associated GTPase [Mycobacterium tuberculosis GM 
1503]
 gi|289712765|gb|EFD76777.1| translation-associated GTPase [Mycobacterium tuberculosis T85]
 gi|298494403|gb|EFI29697.1| translation-associated GTPase [Mycobacterium tuberculosis 94_M4241A]
 gi|308346562|gb|EFP35413.1| GTP binding protein [Mycobacterium tuberculosis SUMu007]
 gi|308366656|gb|EFP55507.1| GTP binding protein [Mycobacterium tuberculosis SUMu012]
 gi|326904661|gb|EGE51594.1| GTP binding protein [Mycobacterium tuberculosis W-148]
 gi|328459593|gb|AEB05016.1| GTP binding protein [Mycobacterium tuberculosis KZN 4207]
 gi|340004316|emb|CCC43458.1| putative GTP binding protein [Mycobacterium canettii CIPT 140010059]
 gi|344218941|gb|AEM99571.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
tuberculosis CTRI-2]
Length=357

 Score =  712 bits (1837),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 356/357 (99%), Positives = 357/357 (100%), Gaps = 0/357 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS
Sbjct  1    MSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD
Sbjct  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA
Sbjct  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE
Sbjct  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG
Sbjct  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV
Sbjct  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357


>gi|31792305|ref|NP_854798.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
bovis AF2122/97]
 gi|121637043|ref|YP_977266.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
bovis BCG str. Pasteur 1173P2]
 gi|224989516|ref|YP_002644203.1| translation-associated GTPase [Mycobacterium bovis BCG str. Tokyo 
172]
 8 more sequence titles
 
gi|289573765|ref|ZP_06453992.1| GTP binding protein [Mycobacterium tuberculosis K85]
 gi|339631177|ref|YP_004722819.1| GTP-binding protein [Mycobacterium africanum GM041182]
 gi|31617893|emb|CAD94003.1| Probable GTP binding protein [Mycobacterium bovis AF2122/97]
 gi|121492690|emb|CAL71159.1| Probable GTP binding protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224772629|dbj|BAH25435.1| translation-associated GTPase [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|289538196|gb|EFD42774.1| GTP binding protein [Mycobacterium tuberculosis K85]
 gi|339330533|emb|CCC26199.1| putative GTP binding protein [Mycobacterium africanum GM041182]
 gi|341601059|emb|CCC63731.1| probable GTP binding protein [Mycobacterium bovis BCG str. Moreau 
RDJ]
Length=357

 Score =  711 bits (1835),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 355/357 (99%), Positives = 357/357 (100%), Gaps = 0/357 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS
Sbjct  1    MSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            QRVVPAPVTFVDIAGL+KGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD
Sbjct  61   QRVVPAPVTFVDIAGLIKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA
Sbjct  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE
Sbjct  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG
Sbjct  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV
Sbjct  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357


>gi|323720393|gb|EGB29487.1| GTP-binding protein [Mycobacterium tuberculosis CDC1551A]
Length=355

 Score =  709 bits (1830),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 354/355 (99%), Positives = 355/355 (100%), Gaps = 0/355 (0%)

Query  3    LSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGSQR  62
            +SLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGSQR
Sbjct  1    MSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGSQR  60

Query  63   VVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVDPQ  122
            VVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVDPQ
Sbjct  61   VVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVDPQ  120

Query  123  SDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAAGV  182
            SDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAAGV
Sbjct  121  SDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAAGV  180

Query  183  DAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTELD  242
            DAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTELD
Sbjct  181  DAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTELD  240

Query  243  DESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAGVI  302
            DESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAGVI
Sbjct  241  DESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAGVI  300

Query  303  HSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            HSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV
Sbjct  301  HSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  355


>gi|308231740|ref|ZP_07663918.1| GTP binding protein [Mycobacterium tuberculosis SUMu001]
 gi|308370059|ref|ZP_07666859.1| GTP binding protein [Mycobacterium tuberculosis SUMu002]
 gi|308370621|ref|ZP_07666981.1| GTP binding protein [Mycobacterium tuberculosis SUMu003]
 18 more sequence titles
 
gi|308371870|ref|ZP_07667256.1| GTP binding protein [Mycobacterium tuberculosis SUMu004]
 gi|308373039|ref|ZP_07430817.2| GTP binding protein [Mycobacterium tuberculosis SUMu005]
 gi|308374217|ref|ZP_07667734.1| GTP binding protein [Mycobacterium tuberculosis SUMu006]
 gi|308376626|ref|ZP_07668313.1| GTP binding protein [Mycobacterium tuberculosis SUMu008]
 gi|308377628|ref|ZP_07668555.1| GTP binding protein [Mycobacterium tuberculosis SUMu009]
 gi|308378839|ref|ZP_07668835.1| GTP binding protein [Mycobacterium tuberculosis SUMu010]
 gi|308379978|ref|ZP_07669086.1| GTP binding protein [Mycobacterium tuberculosis SUMu011]
 gi|308216202|gb|EFO75601.1| GTP binding protein [Mycobacterium tuberculosis SUMu001]
 gi|308325457|gb|EFP14308.1| GTP binding protein [Mycobacterium tuberculosis SUMu002]
 gi|308331388|gb|EFP20239.1| GTP binding protein [Mycobacterium tuberculosis SUMu003]
 gi|308335200|gb|EFP24051.1| GTP binding protein [Mycobacterium tuberculosis SUMu004]
 gi|308339006|gb|EFP27857.1| GTP binding protein [Mycobacterium tuberculosis SUMu005]
 gi|308342676|gb|EFP31527.1| GTP binding protein [Mycobacterium tuberculosis SUMu006]
 gi|308350482|gb|EFP39333.1| GTP binding protein [Mycobacterium tuberculosis SUMu008]
 gi|308355133|gb|EFP43984.1| GTP binding protein [Mycobacterium tuberculosis SUMu009]
 gi|308359086|gb|EFP47937.1| GTP binding protein [Mycobacterium tuberculosis SUMu010]
 gi|308363008|gb|EFP51859.1| GTP binding protein [Mycobacterium tuberculosis SUMu011]
 gi|339297746|gb|AEJ49856.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
tuberculosis CCDC5180]
Length=350

 Score =  698 bits (1802),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 349/350 (99%), Positives = 350/350 (100%), Gaps = 0/350 (0%)

Query  8    VGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGSQRVVPAP  67
            +GLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGSQRVVPAP
Sbjct  1    MGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGSQRVVPAP  60

Query  68   VTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVDPQSDIEV  127
            VTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVDPQSDIEV
Sbjct  61   VTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVDPQSDIEV  120

Query  128  VETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAAGVDAAAL  187
            VETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAAGVDAAAL
Sbjct  121  VETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAAGVDAAAL  180

Query  188  RELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTELDDESAA  247
            RELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTELDDESAA
Sbjct  181  RELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTELDDESAA  240

Query  248  ELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAGVIHSDFE  307
            ELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAGVIHSDFE
Sbjct  241  ELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAGVIHSDFE  300

Query  308  KGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            KGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV
Sbjct  301  KGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  350


>gi|41408780|ref|NP_961616.1| translation-associated GTPase [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41397138|gb|AAS04999.1| hypothetical protein MAP_2682c [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=357

 Score =  654 bits (1687),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 320/357 (90%), Positives = 339/357 (95%), Gaps = 0/357 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVV LPDPRLDKLAE+F S
Sbjct  1    MSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVPLPDPRLDKLAEMFKS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +R+V APVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVF DDDVTHV G+VD
Sbjct  61   ERIVAAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFADDDVTHVAGQVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P+SDIEVVETELILADLQTLERA GRLEKEART+K R+PVY+AAL AQ+ L+ GKTLF+A
Sbjct  121  PRSDIEVVETELILADLQTLERAVGRLEKEARTSKERRPVYEAALAAQETLNGGKTLFSA  180

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            G D + LRELNLLTTKPFLYVFNADE+VLTDPAR+ ELR LVAPADAVFLDAAIESEL E
Sbjct  181  GTDTSLLRELNLLTTKPFLYVFNADESVLTDPARIAELRELVAPADAVFLDAAIESELIE  240

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LDDESAAELLESIGQ+ERGLDALARAGFHTL+LQTFLTAGPKEARAW IHQGDTAPKAAG
Sbjct  241  LDDESAAELLESIGQTERGLDALARAGFHTLRLQTFLTAGPKEARAWVIHQGDTAPKAAG  300

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            VIHSDFEKGFIKAEIVSYDDL+AAGSMA AKAAGKVR+EGKDYVMADGDVVEFRFNV
Sbjct  301  VIHSDFEKGFIKAEIVSYDDLIAAGSMAVAKAAGKVRMEGKDYVMADGDVVEFRFNV  357


>gi|254774116|ref|ZP_05215632.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
avium subsp. avium ATCC 25291]
Length=357

 Score =  627 bits (1618),  Expect = 7e-178, Method: Compositional matrix adjust.
 Identities = 321/357 (90%), Positives = 340/357 (96%), Gaps = 0/357 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVV LPDPRLDKLAE+F S
Sbjct  1    MSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVPLPDPRLDKLAEMFKS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +R+V APVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVF DDDVTHV G+VD
Sbjct  61   ERIVAAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFADDDVTHVAGQVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P+SDIEVVETELILADLQTLERA GRLEKEART+K R+PVY+AAL AQ+ L+ GKTLF+A
Sbjct  121  PRSDIEVVETELILADLQTLERAAGRLEKEARTSKERRPVYEAALAAQETLNGGKTLFSA  180

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            G D + LRELNLLTTKPFLYVFNADE+VLTDPAR+ ELR LVAPADAVFLDAAIESEL E
Sbjct  181  GTDTSLLRELNLLTTKPFLYVFNADESVLTDPARIAELRELVAPADAVFLDAAIESELIE  240

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LDDESAAELLESIGQ+ERGLDALARAGFHTL+LQTFLTAGPKEARAW IHQGDTAPKAAG
Sbjct  241  LDDESAAELLESIGQTERGLDALARAGFHTLRLQTFLTAGPKEARAWVIHQGDTAPKAAG  300

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            VIHSDFEKGFIKAEIVSYDDL+AAGSMAAAKAAGKVR+EGKDYVMADGDVVEFRFNV
Sbjct  301  VIHSDFEKGFIKAEIVSYDDLIAAGSMAAAKAAGKVRMEGKDYVMADGDVVEFRFNV  357


>gi|240171089|ref|ZP_04749748.1| translation-associated GTPase [Mycobacterium kansasii ATCC 12478]
Length=366

 Score =  627 bits (1616),  Expect = 1e-177, Method: Compositional matrix adjust.
 Identities = 325/356 (92%), Positives = 337/356 (95%), Gaps = 0/356 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SLSLGIVGLPNVGKSTLFNALTRN+VVAANYPFATIEPNEGVVSLPD RLDKLAELFGS
Sbjct  1    MSLSLGIVGLPNVGKSTLFNALTRNDVVAANYPFATIEPNEGVVSLPDSRLDKLAELFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +R+VPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVF DDDVTHV G+VD
Sbjct  61   ERIVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFADDDVTHVAGKVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            PQSDIEVVETELILADLQTLERA  RLEKEART K RKPVY+AA+ AQQVLD G TLFA 
Sbjct  121  PQSDIEVVETELILADLQTLERALPRLEKEARTTKERKPVYEAAVAAQQVLDGGTTLFAC  180

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            G+DA+ LRELNLLTTKPFLYVFNADEAVLTD  RV ELR LVAPADAVFLDAAIESEL E
Sbjct  181  GMDASLLRELNLLTTKPFLYVFNADEAVLTDCTRVAELRGLVAPADAVFLDAAIESELAE  240

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LDD+SAAELLESIGQ+ERGLDALARAGFHTLKLQTFLTAGPKE+RAW IHQGDTAPKAAG
Sbjct  241  LDDDSAAELLESIGQTERGLDALARAGFHTLKLQTFLTAGPKESRAWVIHQGDTAPKAAG  300

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFN  356
            VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRF 
Sbjct  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFQ  356


>gi|342861701|ref|ZP_08718347.1| GTP-binding protein YchF [Mycobacterium colombiense CECT 3035]
 gi|342130835|gb|EGT84131.1| GTP-binding protein YchF [Mycobacterium colombiense CECT 3035]
Length=357

 Score =  621 bits (1602),  Expect = 5e-176, Method: Compositional matrix adjust.
 Identities = 311/357 (88%), Positives = 338/357 (95%), Gaps = 0/357 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVV LPDPRLDKLAE+F S
Sbjct  1    MSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVPLPDPRLDKLAEMFDS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            ++VVPAPVTFVDIAG+VKGASEGAGLGNKFLA+IRECDAICQVVRVF DDDV HV G+VD
Sbjct  61   EKVVPAPVTFVDIAGIVKGASEGAGLGNKFLANIRECDAICQVVRVFADDDVVHVDGKVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P+SDIEV+ETELILADLQTLE+A  RLEKEAR NK RK V++AA+ A+ VL++GKTLFAA
Sbjct  121  PRSDIEVIETELILADLQTLEKAVPRLEKEARNNKDRKAVHEAAVAAEAVLNSGKTLFAA  180

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            GVDAA LRELNL+TTKPFLYVFN+DE+VLTD AR  ELRA+VAPADAVFLDA IE+EL E
Sbjct  181  GVDAALLRELNLMTTKPFLYVFNSDESVLTDDARKAELRAMVAPADAVFLDAKIEAELQE  240

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LDDESAAELLESIGQ+ERGLDALARAGFHTLKLQT+LTAGPKEARAW IHQGDTAPKAAG
Sbjct  241  LDDESAAELLESIGQTERGLDALARAGFHTLKLQTYLTAGPKEARAWVIHQGDTAPKAAG  300

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            VIH+DFEKGFIKAEIVSYDDL+AAGSMAAAK+AGKVR+EGKDYVMADGDVVEFRFNV
Sbjct  301  VIHTDFEKGFIKAEIVSYDDLIAAGSMAAAKSAGKVRMEGKDYVMADGDVVEFRFNV  357


>gi|296169978|ref|ZP_06851585.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
parascrofulaceum ATCC BAA-614]
 gi|295895382|gb|EFG75088.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
parascrofulaceum ATCC BAA-614]
Length=357

 Score =  621 bits (1601),  Expect = 6e-176, Method: Compositional matrix adjust.
 Identities = 322/357 (91%), Positives = 336/357 (95%), Gaps = 0/357 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SLSLGIVGLPNVGKSTLFNALTRN+VVAANYPFATIEPNEGVV LPDPRLDKLAELFGS
Sbjct  1    MSLSLGIVGLPNVGKSTLFNALTRNDVVAANYPFATIEPNEGVVPLPDPRLDKLAELFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +R+VPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVF DDDVTHV G VD
Sbjct  61   ERIVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFSDDDVTHVAGEVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P+SDIEVVETELILADLQTLERA  RLEKEART+K R+PVYDAA  AQ+ L+ G TLF A
Sbjct  121  PRSDIEVVETELILADLQTLERALPRLEKEARTSKERRPVYDAAAAAQETLNGGTTLFGA  180

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            G D + LRELNLLTTKPFLYVFNADEAVLTD ARV ELR LVAPADAVFLDAAIE+EL E
Sbjct  181  GADTSLLRELNLLTTKPFLYVFNADEAVLTDAARVAELRKLVAPADAVFLDAAIEAELNE  240

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAW IHQGDTAPKAAG
Sbjct  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWVIHQGDTAPKAAG  300

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            VIH+DFEKGFIKAEIVSYDDL+AAGSMAAAKAAGKVR+EGKDYVMADGDVVEFRFNV
Sbjct  301  VIHTDFEKGFIKAEIVSYDDLIAAGSMAAAKAAGKVRMEGKDYVMADGDVVEFRFNV  357


>gi|183984324|ref|YP_001852615.1| GTP binding protein [Mycobacterium marinum M]
 gi|183177650|gb|ACC42760.1| GTP binding protein [Mycobacterium marinum M]
Length=366

 Score =  616 bits (1588),  Expect = 2e-174, Method: Compositional matrix adjust.
 Identities = 316/356 (89%), Positives = 340/356 (96%), Gaps = 0/356 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SLSLGIVGLPNVGKSTLFNALTRN+V+AANYPFATIEPNEGVVSLPDPRLDKLAELFGS
Sbjct  1    MSLSLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +R+V APVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVF DDDVTHV+GRVD
Sbjct  61   ERIVAAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFHDDDVTHVSGRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P+SDIEVVETELILAD+QTLERA  RLEKEAR NK RKPV++AAL AQ+VLD+GKTLFAA
Sbjct  121  PRSDIEVVETELILADMQTLERAVPRLEKEARNNKERKPVHEAALAAQEVLDSGKTLFAA  180

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            GVD + LRELNLLTTKPFLYVFNADE+VLTD ARV +LR LVAPADAVFLDAAIE+EL E
Sbjct  181  GVDTSLLRELNLLTTKPFLYVFNADESVLTDAARVAQLRELVAPADAVFLDAAIEAELVE  240

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LD+ESAAELLESIGQ+ERGLDALARAGFHTL LQT+LT GPKEARAWTIH+GDTAPKAAG
Sbjct  241  LDEESAAELLESIGQTERGLDALARAGFHTLNLQTYLTVGPKEARAWTIHRGDTAPKAAG  300

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFN  356
            VIH+DFEKGFIKAEIVS+DDL+AAGSMAAAKAAGKVR+EGKDYVMADGDVVEFRF 
Sbjct  301  VIHTDFEKGFIKAEIVSFDDLLAAGSMAAAKAAGKVRMEGKDYVMADGDVVEFRFQ  356


>gi|118462264|ref|YP_880478.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
avium 104]
 gi|118163551|gb|ABK64448.1| GTP-binding protein YchF [Mycobacterium avium 104]
 gi|336458727|gb|EGO37687.1| GTP-binding protein YchF [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=350

 Score =  615 bits (1586),  Expect = 3e-174, Method: Compositional matrix adjust.
 Identities = 314/350 (90%), Positives = 333/350 (96%), Gaps = 0/350 (0%)

Query  8    VGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGSQRVVPAP  67
            +GLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVV LPDPRLDKLAE+F S+R+V AP
Sbjct  1    MGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVPLPDPRLDKLAEMFKSERIVAAP  60

Query  68   VTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVDPQSDIEV  127
            VTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVF DDDVTHV G+VDP+SDIEV
Sbjct  61   VTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFADDDVTHVAGQVDPRSDIEV  120

Query  128  VETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAAGVDAAAL  187
            VETELILADLQTLERA GRLEKEART+K R+PVY+AAL AQ+ L+ GKTLF+AG D + L
Sbjct  121  VETELILADLQTLERAAGRLEKEARTSKERRPVYEAALAAQETLNGGKTLFSAGTDTSLL  180

Query  188  RELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTELDDESAA  247
            RELNLLTTKPFLYVFNADE+VLTDPAR+ ELR LVAPADAVFLDAAIESEL ELDDESAA
Sbjct  181  RELNLLTTKPFLYVFNADESVLTDPARIAELRELVAPADAVFLDAAIESELIELDDESAA  240

Query  248  ELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAGVIHSDFE  307
            ELLESIGQ+ERGLDALARAGFHTL+LQTFLTAGPKEARAW IHQGDTAPKAAGVIHSDFE
Sbjct  241  ELLESIGQTERGLDALARAGFHTLRLQTFLTAGPKEARAWVIHQGDTAPKAAGVIHSDFE  300

Query  308  KGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            KGFIKAEIVSYDDL+AAGSMAAAKAAGKVR+EGKDYVMADGDVVEFRFNV
Sbjct  301  KGFIKAEIVSYDDLIAAGSMAAAKAAGKVRMEGKDYVMADGDVVEFRFNV  350


>gi|118616059|ref|YP_904391.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
ulcerans Agy99]
 gi|118568169|gb|ABL02920.1| GTP binding protein [Mycobacterium ulcerans Agy99]
Length=366

 Score =  613 bits (1580),  Expect = 2e-173, Method: Compositional matrix adjust.
 Identities = 315/355 (89%), Positives = 339/355 (96%), Gaps = 0/355 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SLSLGIVGLPNVGKSTLFNALTRN+V+AANYPFATIEPNEGVVSLPDPRLDKLAELFGS
Sbjct  1    MSLSLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +R+V APVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVF DDDVTHV+GRVD
Sbjct  61   ERIVAAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFHDDDVTHVSGRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P+SDIEVVETELILAD+QTLERA  RLEKEAR NK RKPV++AAL AQ+VLD+GKTLFAA
Sbjct  121  PRSDIEVVETELILADMQTLERAVPRLEKEARNNKERKPVHEAALAAQEVLDSGKTLFAA  180

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            GVD + LRELNLLTTKPFLYVFNADE+VLT  ARV +LR LVAPADAVFLDAAIE+EL E
Sbjct  181  GVDTSLLRELNLLTTKPFLYVFNADESVLTGAARVAQLRELVAPADAVFLDAAIEAELVE  240

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LD+ESAAELLESIGQ+ERGLDALARAGFHTL LQT+LT GPKEARAWTIH+GDTAPKAAG
Sbjct  241  LDEESAAELLESIGQTERGLDALARAGFHTLNLQTYLTVGPKEARAWTIHRGDTAPKAAG  300

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRF  355
            VIH+DFEKGFIKAEIVS+DDL+AAGSMAAAKAAGKVR+EGKDYVMADGDVVEFRF
Sbjct  301  VIHTDFEKGFIKAEIVSFDDLLAAGSMAAAKAAGKVRMEGKDYVMADGDVVEFRF  355


>gi|15828041|ref|NP_302304.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
leprae TN]
 gi|221230518|ref|YP_002503934.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
leprae Br4923]
 gi|4539092|emb|CAB39810.1| putative GTP-binding protein [Mycobacterium leprae]
 gi|13093594|emb|CAC30891.1| conserved hypothetical protein [Mycobacterium leprae]
 gi|219933625|emb|CAR72033.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=356

 Score =  611 bits (1576),  Expect = 6e-173, Method: Compositional matrix adjust.
 Identities = 304/354 (86%), Positives = 323/354 (92%), Gaps = 0/354 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SLSLGIVGLPNVGKSTLFNALTR+NVV ANYPFATIEPNEGVVSLPDPRL KLAELFGS
Sbjct  1    MSLSLGIVGLPNVGKSTLFNALTRSNVVVANYPFATIEPNEGVVSLPDPRLAKLAELFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +R++PA VTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVF  DD+THVTGRVD
Sbjct  61   ERILPAQVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFSGDDITHVTGRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            PQSDI +++TELILADL TLERA  RLEKEAR +K RKP+Y AA+ AQQVL+ G TLFAA
Sbjct  121  PQSDIGIIDTELILADLDTLERALPRLEKEARNHKERKPIYAAAINAQQVLNVGTTLFAA  180

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            GVD +ALRELNLLT KPFLYVFNADEAVLT  A V ELR LVAPADAVFLDAAIE+EL E
Sbjct  181  GVDGSALRELNLLTNKPFLYVFNADEAVLTAAAWVAELRQLVAPADAVFLDAAIEAELAE  240

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LDDESAAELLESIGQ+ERGLDALARAGF TL LQTFLT GPKE RAWTIHQGDTA KAAG
Sbjct  241  LDDESAAELLESIGQTERGLDALARAGFRTLALQTFLTVGPKEVRAWTIHQGDTASKAAG  300

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFR  354
            VIH+DFEK FIKAEIVSYDDL+A GSM+AAKAAGKVR EGKDYVMADGDVVEFR
Sbjct  301  VIHTDFEKRFIKAEIVSYDDLIATGSMSAAKAAGKVRTEGKDYVMADGDVVEFR  354


>gi|336441038|gb|AEI54744.1| GTP-dependent nucleic acid-binding protein [Mycobacterium franklinii]
Length=357

 Score =  607 bits (1566),  Expect = 7e-172, Method: Compositional matrix adjust.
 Identities = 297/357 (84%), Positives = 328/357 (92%), Gaps = 0/357 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALTRNNV+AANYPFATIEPNEGVV LPDPRLDKLAE+FGS
Sbjct  1    MSLNLGIVGLPNVGKSTLFNALTRNNVLAANYPFATIEPNEGVVPLPDPRLDKLAEVFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
             R +PA VTFVDIAG+VKGASEGAGLGNKFLA+IRECDAICQVVRVF DDDV HV GRVD
Sbjct  61   ARTLPATVTFVDIAGIVKGASEGAGLGNKFLANIRECDAICQVVRVFADDDVVHVDGRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P +DIEV+ETELILAD+QTLE+A  RLEKEA+T K R+P+ DAA  AQ+VLD+GKTLF+ 
Sbjct  121  PAADIEVIETELILADMQTLEKAVPRLEKEAKTKKERQPLADAAKAAQEVLDSGKTLFST  180

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            G D +A+RELNL+TTKPFLYVFNADE+VL D  RV +LR LVAPADAVFLDA IESEL E
Sbjct  181  GKDWSAVRELNLMTTKPFLYVFNADESVLGDEERVAQLRELVAPADAVFLDAKIESELQE  240

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LD+ESAAELLESIGQ+ERGLDALA AGF+TLKLQT+LTAGPKEARAWTIHQGDTAPKAAG
Sbjct  241  LDEESAAELLESIGQTERGLDALAHAGFNTLKLQTYLTAGPKEARAWTIHQGDTAPKAAG  300

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            VIH+DFEKGFIKAE+VS++DLV AGSM AAKAAGKVR+EGKDYVM DGDVVEFRFNV
Sbjct  301  VIHTDFEKGFIKAEVVSFEDLVEAGSMTAAKAAGKVRMEGKDYVMVDGDVVEFRFNV  357


>gi|254819700|ref|ZP_05224701.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
intracellulare ATCC 13950]
Length=357

 Score =  598 bits (1542),  Expect = 4e-169, Method: Compositional matrix adjust.
 Identities = 310/357 (87%), Positives = 338/357 (95%), Gaps = 0/357 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVV LPDPRLDKLAE+F S
Sbjct  1    MSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVPLPDPRLDKLAEMFDS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +++VPAPVTFVDIAG+VKGASEGAGLGNKFLA+IRECDAICQVVRVF DDDV HV G+VD
Sbjct  61   EKIVPAPVTFVDIAGIVKGASEGAGLGNKFLANIRECDAICQVVRVFADDDVVHVDGKVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P+SDIEV+ETELILAD+QTLE+A  RLEKEAR NK RKPV++AA+ A+ VL++GKTLFAA
Sbjct  121  PRSDIEVIETELILADMQTLEKAVPRLEKEARNNKERKPVHEAAVAAEAVLNSGKTLFAA  180

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            GVDA+ LRELNL+TTKPFLYVFNADE+VLTD AR  EL A+VAPADAVFLDA IE+EL E
Sbjct  181  GVDASLLRELNLMTTKPFLYVFNADESVLTDDARKAELAAMVAPADAVFLDAKIEAELQE  240

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LDDESAAELLESIGQ+ERGLDALARAGFHTLKLQT+LTAGPKEARAW IHQGDTAPKAAG
Sbjct  241  LDDESAAELLESIGQTERGLDALARAGFHTLKLQTYLTAGPKEARAWVIHQGDTAPKAAG  300

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            VIH+DFEKGFIKAEIVSYDDL+AAGSMAAAKAAGKVR+EGKDYVMADGDVVEFRFNV
Sbjct  301  VIHTDFEKGFIKAEIVSYDDLIAAGSMAAAKAAGKVRMEGKDYVMADGDVVEFRFNV  357


>gi|120405577|ref|YP_955406.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
vanbaalenii PYR-1]
 gi|119958395|gb|ABM15400.1| GTP-binding protein YchF [Mycobacterium vanbaalenii PYR-1]
Length=360

 Score =  596 bits (1536),  Expect = 2e-168, Method: Compositional matrix adjust.
 Identities = 305/357 (86%), Positives = 333/357 (94%), Gaps = 0/357 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            V L+LGIVGLPNVGKSTLFNALTRN+V+AANYPFATIEPNEGVV+LPDPRL +LA +FGS
Sbjct  4    VGLNLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNEGVVALPDPRLTELARIFGS  63

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            ++++PAPVTFVDIAG+VKGASEGAGLGNKFLA+IRECDAICQVVRVF DDDV HV GRVD
Sbjct  64   EKILPAPVTFVDIAGIVKGASEGAGLGNKFLANIRECDAICQVVRVFADDDVVHVDGRVD  123

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P+SDIEV+ETELILAD+QTLERA  RLEKEART+K R+PVYDAA+ A ++LD GKTLF+A
Sbjct  124  PKSDIEVIETELILADMQTLERALPRLEKEARTHKDRRPVYDAAVAAGKILDTGKTLFSA  183

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            G D + LRELNLLT KPFLYVFNADEAVLTD  RV  LR LVAPADAVFLDA IE+EL E
Sbjct  184  GFDVSELRELNLLTAKPFLYVFNADEAVLTDTERVAALRELVAPADAVFLDAKIEAELQE  243

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LD+ESAAELLESIGQ+ERGLDALARAGFHTLKLQT+LTAGPKEARAWTIHQGDTAPKAAG
Sbjct  244  LDEESAAELLESIGQTERGLDALARAGFHTLKLQTYLTAGPKEARAWTIHQGDTAPKAAG  303

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            VIHSDFEKGFIKAE+VS+DDLV AGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV
Sbjct  304  VIHSDFEKGFIKAEVVSFDDLVEAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  360


>gi|315443132|ref|YP_004076011.1| GTP-binding protein YchF [Mycobacterium sp. Spyr1]
 gi|315261435|gb|ADT98176.1| GTP-binding protein YchF [Mycobacterium sp. Spyr1]
Length=360

 Score =  595 bits (1533),  Expect = 4e-168, Method: Compositional matrix adjust.
 Identities = 302/357 (85%), Positives = 333/357 (94%), Gaps = 0/357 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            V L+LGIVGLPNVGKSTLFNALTRN+V+AANYPFATIEPNEGVV+LPDPRL +LA +FGS
Sbjct  4    VGLNLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNEGVVALPDPRLTELARMFGS  63

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +++VPAPVTFVDIAG+VKGASEGAGLGNKFLA+IRE DAICQVVRVF DDDV HV GRVD
Sbjct  64   EKIVPAPVTFVDIAGIVKGASEGAGLGNKFLANIRESDAICQVVRVFADDDVVHVDGRVD  123

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P+SDIEV+ETELILAD+QTLE+A  RLEKEAR NK RKPV +AAL AQ++L+ GKTLFAA
Sbjct  124  PKSDIEVIETELILADMQTLEKAVPRLEKEARNNKDRKPVLEAALAAQEILNTGKTLFAA  183

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            G+D   LRELNL+TTKPFLYVFNADE+VLTD  RV ELR LVAPADAVFLDA IE+EL E
Sbjct  184  GMDTTLLRELNLMTTKPFLYVFNADESVLTDEKRVAELRELVAPADAVFLDAKIEAELQE  243

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LD+ESAAELLESIGQ+ERGLDALARAGFHTLKLQT+LTAGPKEARAWTIHQGDTAPKAAG
Sbjct  244  LDEESAAELLESIGQTERGLDALARAGFHTLKLQTYLTAGPKEARAWTIHQGDTAPKAAG  303

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            VIH+DFEKGFIKAE+VS+DDL+ AGSMAAAKAAGKVR+EGKDYVMADGDVVEFRFNV
Sbjct  304  VIHTDFEKGFIKAEVVSFDDLMEAGSMAAAKAAGKVRMEGKDYVMADGDVVEFRFNV  360


>gi|145222670|ref|YP_001133348.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
gilvum PYR-GCK]
 gi|145215156|gb|ABP44560.1| GTP-binding protein YchF [Mycobacterium gilvum PYR-GCK]
Length=360

 Score =  594 bits (1532),  Expect = 6e-168, Method: Compositional matrix adjust.
 Identities = 302/357 (85%), Positives = 332/357 (93%), Gaps = 0/357 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            V L+LGIVGLPNVGKSTLFNALTRN+V+AANYPFATIEPNEGVV+LPDPRL +LA +FGS
Sbjct  4    VGLNLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNEGVVALPDPRLTELARMFGS  63

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +++VPAPVTFVDIAG+VKGASEGAGLGNKFLA+IRE DAICQVVRVF DDDV HV GRVD
Sbjct  64   EKIVPAPVTFVDIAGIVKGASEGAGLGNKFLANIRESDAICQVVRVFADDDVVHVDGRVD  123

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P+SDIEV+ETELILAD+QTLE+A  RLEKEAR NK RKPV +AAL AQ++L+ GKTLFAA
Sbjct  124  PKSDIEVIETELILADMQTLEKAVPRLEKEARNNKDRKPVLEAALAAQEILNTGKTLFAA  183

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            G+D   LRELNL+TTKPFLYVFNADE VLTD  RV ELR LVAPADAVFLDA IE+EL E
Sbjct  184  GMDTTLLRELNLMTTKPFLYVFNADETVLTDEKRVAELRELVAPADAVFLDAKIEAELQE  243

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LD+ESAAELLESIGQ+ERGLDALARAGFHTLKLQT+LTAGPKEARAWTIHQGDTAPKAAG
Sbjct  244  LDEESAAELLESIGQTERGLDALARAGFHTLKLQTYLTAGPKEARAWTIHQGDTAPKAAG  303

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            VIH+DFEKGFIKAE+VS+DDL+ AGSMAAAKAAGKVR+EGKDYVMADGDVVEFRFNV
Sbjct  304  VIHTDFEKGFIKAEVVSFDDLMEAGSMAAAKAAGKVRMEGKDYVMADGDVVEFRFNV  360


>gi|118472879|ref|YP_889468.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
smegmatis str. MC2 155]
 gi|118174166|gb|ABK75062.1| GTP-binding protein YchF [Mycobacterium smegmatis str. MC2 155]
Length=368

 Score =  594 bits (1532),  Expect = 6e-168, Method: Compositional matrix adjust.
 Identities = 307/358 (86%), Positives = 332/358 (93%), Gaps = 4/358 (1%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALTRN+V+AANYPFATIEPNEGVV LPDPRLDKLAELFGS
Sbjct  1    MSLNLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNEGVVPLPDPRLDKLAELFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            ++ VPAPVTFVDIAG+VKGASEGAGLGNKFLA+IRECDAICQVVRVF DDDV HV GRVD
Sbjct  61   EKTVPAPVTFVDIAGIVKGASEGAGLGNKFLANIRECDAICQVVRVFNDDDVVHVDGRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFA-  179
            P+SDIEV+ETELILAD+QTLE+A  RLEKEAR NK RKPV +AA+ AQ VLD+GKTLFA 
Sbjct  121  PRSDIEVIETELILADMQTLEKAVPRLEKEARNNKERKPVLEAAVAAQAVLDSGKTLFAG  180

Query  180  ---AGVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIES  236
               AG+D   LRELNL+TTKPFLYVFNADE+VLTD AR  ELR +VAPADAVFLDA IE+
Sbjct  181  AAAAGIDVTLLRELNLMTTKPFLYVFNADESVLTDEARQAELREMVAPADAVFLDAKIEA  240

Query  237  ELTELDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAP  296
            EL ELDDESAAELLESIGQ+ERGLDALARAGFHTLKLQT+LTAGPKEARAWTIHQGDTAP
Sbjct  241  ELLELDDESAAELLESIGQTERGLDALARAGFHTLKLQTYLTAGPKEARAWTIHQGDTAP  300

Query  297  KAAGVIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFR  354
            KAAGVIHSDFEKGFIKAE+VS+DDLV AGSMAAAKAAGKVR+EGKDYVMADGDVVEFR
Sbjct  301  KAAGVIHSDFEKGFIKAEVVSFDDLVEAGSMAAAKAAGKVRMEGKDYVMADGDVVEFR  358


>gi|108801066|ref|YP_641263.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
sp. MCS]
 gi|119870208|ref|YP_940160.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
sp. KMS]
 gi|108771485|gb|ABG10207.1| conserved hypothetical protein [Mycobacterium sp. MCS]
 gi|119696297|gb|ABL93370.1| GTP-binding protein YchF [Mycobacterium sp. KMS]
Length=376

 Score =  593 bits (1530),  Expect = 1e-167, Method: Compositional matrix adjust.
 Identities = 303/354 (86%), Positives = 331/354 (94%), Gaps = 0/354 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            V L+LGIVGLPNVGKSTLFNALTRNNV+AANYPFATIEPNEGVV+LPDPRL+ LA++F S
Sbjct  12   VGLNLGIVGLPNVGKSTLFNALTRNNVLAANYPFATIEPNEGVVALPDPRLEALAKIFHS  71

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +++VPAPVTFVDIAG+VKGASEGAGLGNKFLA+IRECDAICQVVRVF DDDV HV G+VD
Sbjct  72   EKIVPAPVTFVDIAGIVKGASEGAGLGNKFLANIRECDAICQVVRVFADDDVVHVDGKVD  131

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P+SDIEV+ETELILAD+QTLERA  RLEKEART+K RKPV DAAL AQ+VL++GKTLFAA
Sbjct  132  PKSDIEVIETELILADMQTLERAVPRLEKEARTHKDRKPVLDAALAAQEVLNSGKTLFAA  191

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            G D + LRELNL+TTKPFLYVFNADE+VLTD AR  ELR LVAPAD VFLDA IE+EL E
Sbjct  192  GTDVSLLRELNLMTTKPFLYVFNADESVLTDEARKAELRELVAPADCVFLDAKIEAELQE  251

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LDDESAAELLESIGQ+ERGLDALARAGFHTL+LQT+LTAGPKEARAWTIHQGDTAPKAAG
Sbjct  252  LDDESAAELLESIGQTERGLDALARAGFHTLRLQTYLTAGPKEARAWTIHQGDTAPKAAG  311

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFR  354
            VIHSDFEKGFIKAEIVS+DDL  AGSMAAAKAAGKVR+EGKDYVMADGDVVEFR
Sbjct  312  VIHSDFEKGFIKAEIVSFDDLAEAGSMAAAKAAGKVRMEGKDYVMADGDVVEFR  365


>gi|126436904|ref|YP_001072595.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
sp. JLS]
 gi|126236704|gb|ABO00105.1| GTP-binding protein YchF [Mycobacterium sp. JLS]
Length=376

 Score =  592 bits (1526),  Expect = 3e-167, Method: Compositional matrix adjust.
 Identities = 303/354 (86%), Positives = 331/354 (94%), Gaps = 0/354 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            V L+LGIVGLPNVGKSTLFNALTRNNV+AANYPFATIEPNEGVV+LPDPRL+ LA++F S
Sbjct  12   VGLNLGIVGLPNVGKSTLFNALTRNNVLAANYPFATIEPNEGVVALPDPRLEALAKIFHS  71

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +++VPAPVTFVDIAG+VKGASEGAGLGNKFLA+IRECDAICQVVRVF DDDV HV G+VD
Sbjct  72   EKIVPAPVTFVDIAGIVKGASEGAGLGNKFLANIRECDAICQVVRVFADDDVVHVDGKVD  131

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P+SDIEV+ETELILAD+QTLERA  RLEKEART+K RKPV DAAL AQ+VL++GKTLFAA
Sbjct  132  PKSDIEVIETELILADMQTLERAVPRLEKEARTHKDRKPVLDAALAAQEVLNSGKTLFAA  191

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            G D + LRELNL+TTKPFLYVFNADE+VLTD AR  ELR LVAPAD VFLDA IE+EL E
Sbjct  192  GTDVSLLRELNLMTTKPFLYVFNADESVLTDEARKVELRELVAPADCVFLDAKIEAELQE  251

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LDDESAAELLESIGQ+ERGLDALARAGFHTL+LQT+LTAGPKEARAWTIHQGDTAPKAAG
Sbjct  252  LDDESAAELLESIGQTERGLDALARAGFHTLRLQTYLTAGPKEARAWTIHQGDTAPKAAG  311

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFR  354
            VIHSDFEKGFIKAEIVS+DDL  AGSMAAAKAAGKVR+EGKDYVMADGDVVEFR
Sbjct  312  VIHSDFEKGFIKAEIVSFDDLAEAGSMAAAKAAGKVRMEGKDYVMADGDVVEFR  365


>gi|336441042|gb|AEI54746.1| GTP-dependent nucleic acid-binding protein [Mycobacterium chelonae]
Length=357

 Score =  589 bits (1518),  Expect = 3e-166, Method: Compositional matrix adjust.
 Identities = 301/357 (85%), Positives = 329/357 (93%), Gaps = 0/357 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALTRNNV+AANYPFATIEPNEGVV LPDPRLDKLAE+FGS
Sbjct  1    MSLNLGIVGLPNVGKSTLFNALTRNNVLAANYPFATIEPNEGVVPLPDPRLDKLAEVFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
             R +PA VTFVDIAG+VKGASEGAGLGNKFLA+IRECDAICQVVRVF DDDV HV GRVD
Sbjct  61   ARTLPATVTFVDIAGIVKGASEGAGLGNKFLANIRECDAICQVVRVFADDDVVHVDGRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P +DIEV+ETELILAD+QTLE+A  RLEKEA+T K R+P+ DAA  AQ+VLD+GKTLF+ 
Sbjct  121  PAADIEVIETELILADMQTLEKAVPRLEKEAKTKKDRQPLADAAKAAQEVLDSGKTLFST  180

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            G D + +RELNL+TTKPFLYVFNADE+VL D ARV +LR LVAPADAVFLDA IESEL E
Sbjct  181  GQDWSVVRELNLMTTKPFLYVFNADESVLGDEARVAQLRELVAPADAVFLDAKIESELQE  240

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LD+ESAAELLESIGQSERGLDALA AGFHTLKLQT+LTAGPKEARAWTIHQGDTAPKAAG
Sbjct  241  LDEESAAELLESIGQSERGLDALAHAGFHTLKLQTYLTAGPKEARAWTIHQGDTAPKAAG  300

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            VIH+DFEKGFIKAE+VSY+DLV AGSMAAAKAAGKVR+EGKDYVM DGDVVEFRFNV
Sbjct  301  VIHTDFEKGFIKAEVVSYEDLVEAGSMAAAKAAGKVRMEGKDYVMVDGDVVEFRFNV  357


>gi|336441044|gb|AEI54747.1| GTP-dependent nucleic acid-binding protein [Mycobacterium immunogenum]
Length=357

 Score =  588 bits (1516),  Expect = 4e-166, Method: Compositional matrix adjust.
 Identities = 299/357 (84%), Positives = 330/357 (93%), Gaps = 0/357 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALTRNNV+AANYPFATIEPNEGVV LPDPRLDKLAE+FGS
Sbjct  1    MSLNLGIVGLPNVGKSTLFNALTRNNVLAANYPFATIEPNEGVVPLPDPRLDKLAEVFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
             R +PA VTFVDIAG+VKGASEGAGLGNKFLA+IRECDAICQVVRVF DDDV HV GRVD
Sbjct  61   ARTLPATVTFVDIAGIVKGASEGAGLGNKFLANIRECDAICQVVRVFADDDVVHVDGRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P +DIEV+ETELILAD+QTLE+A  RLEKEA+T K R+P+ DAA  AQ+VLD GKTLF+ 
Sbjct  121  PAADIEVIETELILADMQTLEKAVPRLEKEAKTKKERQPLLDAAKAAQEVLDGGKTLFST  180

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            G D +++RELNL+TTKPFLYVFNADE+VL D ARV +LRALVAPADAVFLDA IESEL E
Sbjct  181  GKDWSSVRELNLMTTKPFLYVFNADESVLGDEARVAQLRALVAPADAVFLDAKIESELQE  240

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LD+ESAAELLESIGQ+ERGLDALA AGFHTLKLQT+LTAGPKEARAWTIHQGDTAPKAAG
Sbjct  241  LDEESAAELLESIGQTERGLDALAHAGFHTLKLQTYLTAGPKEARAWTIHQGDTAPKAAG  300

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            VIH+DFEKGFIKAE+VSY+DL+ AGSMAAAKAAGKVR+EGK+YVM DGDVVEFRFNV
Sbjct  301  VIHTDFEKGFIKAEVVSYEDLIEAGSMAAAKAAGKVRMEGKEYVMVDGDVVEFRFNV  357


>gi|169628359|ref|YP_001702008.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
abscessus ATCC 19977]
 gi|169240326|emb|CAM61354.1| Probable GTP binding protein [Mycobacterium abscessus]
 gi|336441036|gb|AEI54743.1| GTP-dependent nucleic acid-binding protein [Mycobacterium abscessus]
 gi|336441040|gb|AEI54745.1| GTP-dependent nucleic acid-binding protein [Mycobacterium bolletii]
 gi|336441046|gb|AEI54748.1| GTP-dependent nucleic acid-binding protein [Mycobacterium massiliense]
Length=357

 Score =  587 bits (1514),  Expect = 8e-166, Method: Compositional matrix adjust.
 Identities = 299/357 (84%), Positives = 330/357 (93%), Gaps = 0/357 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALTRNNV+AANYPFATIEPNEGVV LPDPRLDKLAE+FGS
Sbjct  1    MSLNLGIVGLPNVGKSTLFNALTRNNVLAANYPFATIEPNEGVVPLPDPRLDKLAEVFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
             R +PA VTFVDIAG+VKGASEGAGLGNKFLA+IRECDAICQVVRVF DDDV HV GRVD
Sbjct  61   ARTLPATVTFVDIAGIVKGASEGAGLGNKFLANIRECDAICQVVRVFADDDVVHVDGRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P +DIEV+ETELILAD+QTLE+A  RLEKEA+  K R+P+ DAA  AQ+VLD GKTLF+ 
Sbjct  121  PAADIEVIETELILADMQTLEKAVPRLEKEAKNKKDRQPLLDAAKAAQEVLDGGKTLFST  180

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            G D +++RELNL+TTKPFLYVFNADE+VL D ARV +LRALVAPADAVFLDA IESEL E
Sbjct  181  GKDWSSVRELNLMTTKPFLYVFNADESVLGDEARVAQLRALVAPADAVFLDAKIESELQE  240

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LD+ESAAELLESIGQ+ERGLDALARAGFHTLKLQT+LTAGPKEARAWTIHQGDTAPKAAG
Sbjct  241  LDEESAAELLESIGQAERGLDALARAGFHTLKLQTYLTAGPKEARAWTIHQGDTAPKAAG  300

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            VIH+DFEKGFIKAE+VSY+DL+ AGSMAAAKAAGKVR+EGK+YVM DGDVVEFRFNV
Sbjct  301  VIHTDFEKGFIKAEVVSYEDLIEAGSMAAAKAAGKVRMEGKEYVMVDGDVVEFRFNV  357


>gi|333989702|ref|YP_004522316.1| GTP binding protein [Mycobacterium sp. JDM601]
 gi|333485670|gb|AEF35062.1| GTP binding protein [Mycobacterium sp. JDM601]
Length=350

 Score =  587 bits (1514),  Expect = 9e-166, Method: Compositional matrix adjust.
 Identities = 297/350 (85%), Positives = 327/350 (94%), Gaps = 0/350 (0%)

Query  8    VGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGSQRVVPAP  67
            +GLPNVGKSTLFNALTRN+V+AANYPFATIEPNEGVV LPDPRL KLAE+FGS+R++PAP
Sbjct  1    MGLPNVGKSTLFNALTRNDVLAANYPFATIEPNEGVVPLPDPRLAKLAEIFGSERILPAP  60

Query  68   VTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVDPQSDIEV  127
            VTFVDIAG+VKGASEGAGLGNKFLA+IRECDAICQVVRVF DDDV HV G+VDP++DIEV
Sbjct  61   VTFVDIAGIVKGASEGAGLGNKFLANIRECDAICQVVRVFSDDDVVHVDGKVDPEADIEV  120

Query  128  VETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAAGVDAAAL  187
            + TEL+LAD+QTLE+A  RLEKEAR NK RKP+ +AA+ AQQ+LD+GKTLF+ GVD A L
Sbjct  121  IATELMLADMQTLEKAVPRLEKEARNNKDRKPMLEAAVAAQQILDSGKTLFSGGVDPAPL  180

Query  188  RELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTELDDESAA  247
            RELNLLTTKPFLYVFNADE+VLTD ARV  LR LVAPADAVFLDA IE+EL ELDDESA 
Sbjct  181  RELNLLTTKPFLYVFNADESVLTDSARVAALRELVAPADAVFLDAKIEAELAELDDESAM  240

Query  248  ELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAGVIHSDFE  307
            ELLESIGQ+ERGLDALARAGFHTLKLQT+LTAGPKEARAWTIHQGDTAPKAAGVIH+DFE
Sbjct  241  ELLESIGQTERGLDALARAGFHTLKLQTYLTAGPKEARAWTIHQGDTAPKAAGVIHTDFE  300

Query  308  KGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            KGFIKAE+VSYDDL+ AGSMAAAKAAGKVR+EGKDYVMADGDVVEFRFNV
Sbjct  301  KGFIKAEVVSYDDLIEAGSMAAAKAAGKVRMEGKDYVMADGDVVEFRFNV  350


>gi|339294106|gb|AEJ46217.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium 
tuberculosis CCDC5079]
Length=304

 Score =  585 bits (1507),  Expect = 4e-165, Method: Compositional matrix adjust.
 Identities = 293/293 (100%), Positives = 293/293 (100%), Gaps = 0/293 (0%)

Query  65   PAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVDPQSD  124
            PAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVDPQSD
Sbjct  12   PAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVDPQSD  71

Query  125  IEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAAGVDA  184
            IEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAAGVDA
Sbjct  72   IEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAAGVDA  131

Query  185  AALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTELDDE  244
            AALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTELDDE
Sbjct  132  AALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTELDDE  191

Query  245  SAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAGVIHS  304
            SAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAGVIHS
Sbjct  192  SAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAGVIHS  251

Query  305  DFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            DFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV
Sbjct  252  DFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  304


>gi|333921051|ref|YP_004494632.1| GTP-binding protein YchF [Amycolicicoccus subflavus DQS3-9A1]
 gi|333483272|gb|AEF41832.1| GTP-binding protein YchF [Amycolicicoccus subflavus DQS3-9A1]
Length=359

 Score =  582 bits (1499),  Expect = 4e-164, Method: Compositional matrix adjust.
 Identities = 287/359 (80%), Positives = 323/359 (90%), Gaps = 2/359 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALT+N+VVAANYPFATIEPN GVV LPDPRLDKLAE+FGS
Sbjct  1    MSLTLGIVGLPNVGKSTLFNALTKNDVVAANYPFATIEPNVGVVELPDPRLDKLAEIFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            QR++PA V+FVDIAG+VKGASEGAGLGNKFLA+IRE DAICQVVRVF DDDV HV GRVD
Sbjct  61   QRILPATVSFVDIAGIVKGASEGAGLGNKFLANIREADAICQVVRVFTDDDVVHVDGRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFA-  179
            P SDIEV+ETELILADLQTLE+A  RLEKE++ NK ++P+ +AA  AQQVLD GKTLF+ 
Sbjct  121  PLSDIEVIETELILADLQTLEKAVPRLEKESKNNKDKRPLAEAAKEAQQVLDGGKTLFSQ  180

Query  180  -AGVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESEL  238
               +D   LREL+LLTTKPFLYVFNADE VLTD  R  ELRA VAPADAVFLDA +ES+L
Sbjct  181  KGSMDLGMLRELHLLTTKPFLYVFNADEGVLTDEDRKNELRAAVAPADAVFLDAKVESDL  240

Query  239  TELDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKA  298
             ELD+ESA ELLE+IGQ+E GL +LARAGFHTL LQT+LTAGPKEARAWTIH+GDTAPKA
Sbjct  241  QELDEESALELLETIGQTEPGLYSLARAGFHTLGLQTYLTAGPKEARAWTIHKGDTAPKA  300

Query  299  AGVIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            AGVIH+DFE+GFIKAEIVSY+DLVAAGSMAAAK+AGKVR+EGKDYVM DGDVV+F+FNV
Sbjct  301  AGVIHTDFERGFIKAEIVSYEDLVAAGSMAAAKSAGKVRLEGKDYVMVDGDVVDFKFNV  359


>gi|312138768|ref|YP_004006104.1| gtpase [Rhodococcus equi 103S]
 gi|325676538|ref|ZP_08156216.1| GTP-dependent nucleic acid-binding protein EngD [Rhodococcus 
equi ATCC 33707]
 gi|311888107|emb|CBH47419.1| putative GTPase [Rhodococcus equi 103S]
 gi|325552716|gb|EGD22400.1| GTP-dependent nucleic acid-binding protein EngD [Rhodococcus 
equi ATCC 33707]
Length=359

 Score =  565 bits (1456),  Expect = 4e-159, Method: Compositional matrix adjust.
 Identities = 274/359 (77%), Positives = 321/359 (90%), Gaps = 2/359 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALT+N+V+AANYPFATIEPN G+V LPDPRL+KLAE+FGS
Sbjct  1    MSLTLGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGLVELPDPRLNKLAEIFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +R++PA V+FVDIAG+VKGASEGAGLGNKFLA+IRE DAICQVVRVF DDDV HV GRVD
Sbjct  61   ERILPATVSFVDIAGIVKGASEGAGLGNKFLANIREADAICQVVRVFADDDVVHVDGRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P SDIEV+ETEL++AD+Q+LE+A  RLEKEA+ NK  KP ++ AL+AQ++L+ GKTLF+A
Sbjct  121  PASDIEVIETELVIADMQSLEKALPRLEKEAKKNKELKPQHEEALKAQEILNEGKTLFSA  180

Query  181  --GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESEL  238
               +D + LREL+LLTTKPFLYVFNADE+VLTD A+V ELR  VAPADAVFLDA +E EL
Sbjct  181  KDKLDFSLLRELHLLTTKPFLYVFNADESVLTDEAKVAELRDSVAPADAVFLDAKVEHEL  240

Query  239  TELDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKA  298
             ELD++   E+L+SIGQSE GL ALAR GFHTL LQT+LTAGPKEARAWTIH+GDTAP+A
Sbjct  241  LELDEDDRQEMLDSIGQSEPGLHALARTGFHTLGLQTYLTAGPKEARAWTIHKGDTAPQA  300

Query  299  AGVIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            AGVIH+DFE+GFIKAEIVS+DDLV AGSM AAK+AGKVR+EGKDY+M DGDVVEFRFNV
Sbjct  301  AGVIHTDFERGFIKAEIVSFDDLVEAGSMNAAKSAGKVRMEGKDYIMQDGDVVEFRFNV  359


>gi|134097557|ref|YP_001103218.1| GTP-dependent nucleic acid-binding protein EngD [Saccharopolyspora 
erythraea NRRL 2338]
 gi|291009181|ref|ZP_06567154.1| GTP-dependent nucleic acid-binding protein EngD [Saccharopolyspora 
erythraea NRRL 2338]
 gi|133910180|emb|CAM00293.1| GTP-binding protein YchF [Saccharopolyspora erythraea NRRL 2338]
Length=359

 Score =  553 bits (1426),  Expect = 1e-155, Method: Compositional matrix adjust.
 Identities = 279/359 (78%), Positives = 310/359 (87%), Gaps = 2/359 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALT N+V+ ANYPFATIEPN GVV LPD RLDKLAE+F S
Sbjct  1    MSLTLGIVGLPNVGKSTLFNALTSNDVLEANYPFATIEPNVGVVPLPDKRLDKLAEVFES  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
             + VPA V+FVDIAGLVKGASEG GLGNKFLA+IRE DAICQV+RVF D DV HV GRVD
Sbjct  61   AKTVPATVSFVDIAGLVKGASEGQGLGNKFLANIREADAICQVIRVFDDPDVVHVDGRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P SDIE + TELILADLQTLE+A  RLEKEART+K ++P  +AA  A+ +LD+G+TLF A
Sbjct  121  PSSDIETINTELILADLQTLEKALPRLEKEARTHKDKRPALEAAKEAKDILDSGQTLFGA  180

Query  181  G--VDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESEL  238
            G   D   LRELNLLTTKPFLYVFNADE VLTD  +  ELR LVAPADAVFLDA +ESEL
Sbjct  181  GKGADTVELRELNLLTTKPFLYVFNADEGVLTDEDKQRELRELVAPADAVFLDAKVESEL  240

Query  239  TELDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKA  298
             ELD+ESA ELLESIGQ E GL ALARAGFHTL LQT+LTAGPKEARAWTI QG TAP+A
Sbjct  241  IELDEESARELLESIGQPEPGLHALARAGFHTLGLQTYLTAGPKEARAWTIRQGWTAPQA  300

Query  299  AGVIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            AGVIH+DFE+GFIKAE+VSYDDL+ AG+MAAAK+AGKVR+EGKDYVMADGDVVEFRFNV
Sbjct  301  AGVIHTDFERGFIKAEVVSYDDLLEAGTMAAAKSAGKVRMEGKDYVMADGDVVEFRFNV  359


>gi|54026759|ref|YP_121001.1| GTP-dependent nucleic acid-binding protein EngD [Nocardia farcinica 
IFM 10152]
 gi|54018267|dbj|BAD59637.1| putative GTP-binding protein [Nocardia farcinica IFM 10152]
Length=359

 Score =  551 bits (1421),  Expect = 5e-155, Method: Compositional matrix adjust.
 Identities = 289/359 (81%), Positives = 324/359 (91%), Gaps = 2/359 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALT+N+V+AANYPFATIEPN GVV LPDPRL+KLAE+FGS
Sbjct  1    MSLTLGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVPLPDPRLEKLAEIFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +R+VPA V+FVDIAG+VKGASEGAGLGNKFLA+IRE DAICQVVRVF DDDV HV GRVD
Sbjct  61   ERIVPATVSFVDIAGIVKGASEGAGLGNKFLANIREADAICQVVRVFADDDVVHVDGRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P +DIEV+ETELILADLQTLE+A  RL+KEA+  K RKPV DAA  A+++L++GKTLFAA
Sbjct  121  PAADIEVIETELILADLQTLEKAVVRLDKEAKVKKDRKPVADAAKAAREILNSGKTLFAA  180

Query  181  --GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESEL  238
               VD   L+EL+LLT KPFLYVFNADE+VLTD AR   L+A VAPADAVFLDA +E+EL
Sbjct  181  RNEVDTDLLKELSLLTIKPFLYVFNADESVLTDEARKESLKASVAPADAVFLDAKVEAEL  240

Query  239  TELDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKA  298
             ELD ESAAELLESIGQ+E GL ALARAGFHTL LQT+LTAGPKEARAWTIHQGDTAPKA
Sbjct  241  LELDAESAAELLESIGQTEPGLHALARAGFHTLGLQTYLTAGPKEARAWTIHQGDTAPKA  300

Query  299  AGVIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            AGVIH+DFE+GFIKAEIV++DDLV AGSMAAAKAAGKVR+EGKDYVMADGDVVEFRFNV
Sbjct  301  AGVIHTDFERGFIKAEIVAFDDLVEAGSMAAAKAAGKVRMEGKDYVMADGDVVEFRFNV  359


>gi|302530075|ref|ZP_07282417.1| translation-associated GTPase [Streptomyces sp. AA4]
 gi|302438970|gb|EFL10786.1| translation-associated GTPase [Streptomyces sp. AA4]
Length=360

 Score =  550 bits (1417),  Expect = 1e-154, Method: Compositional matrix adjust.
 Identities = 276/360 (77%), Positives = 315/360 (88%), Gaps = 3/360 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALTRN+V+AANYPFATIEPN GVV LPDPRLDKLAE+F S
Sbjct  1    MSLTLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGVVPLPDPRLDKLAEIFSS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            ++ VPA V+FVDIAG+VKGASEGAGLGNKFLA+IRE +AICQV+RVF D DV HV GR+D
Sbjct  61   EKTVPAVVSFVDIAGIVKGASEGAGLGNKFLANIREANAICQVIRVFDDPDVVHVDGRID  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P SDIE + TELILADLQTLE+A  RLEKEART K  +P  + A +A+++LD+G+TLF A
Sbjct  121  PMSDIETINTELILADLQTLEKALPRLEKEARTKKEARPALENAQKAKEILDSGRTLFQA  180

Query  181  --GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESEL  238
               +D  ALREL+LLTTKPFLYVFNADEAVLTD AR  EL  LVAPADAVFLDA +E+EL
Sbjct  181  QKDIDGEALRELSLLTTKPFLYVFNADEAVLTDEARREELAKLVAPADAVFLDAKVEAEL  240

Query  239  TELDD-ESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPK  297
             ELDD ES  ELLES+GQ E GL ALARAGFHTL LQT+LTAGPKE+RAWTI QG TAP+
Sbjct  241  LELDDEESVRELLESVGQLEPGLHALARAGFHTLGLQTYLTAGPKESRAWTIPQGATAPQ  300

Query  298  AAGVIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            AAGVIH+DFE+GFIKAE+VS++DLV AGSMAAA++AGKVR+EGKDYVMADGDVVEFRFNV
Sbjct  301  AAGVIHTDFERGFIKAEVVSFEDLVEAGSMAAARSAGKVRMEGKDYVMADGDVVEFRFNV  360


>gi|257057108|ref|YP_003134940.1| GTP-dependent nucleic acid-binding protein EngD [Saccharomonospora 
viridis DSM 43017]
 gi|256586980|gb|ACU98113.1| GTP-binding protein YchF [Saccharomonospora viridis DSM 43017]
Length=360

 Score =  548 bits (1412),  Expect = 5e-154, Method: Compositional matrix adjust.
 Identities = 277/360 (77%), Positives = 317/360 (89%), Gaps = 3/360 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALTRN+V++ANYPFATIEPN GVV LPDPRLDKLAE+FGS
Sbjct  1    MSLTLGIVGLPNVGKSTLFNALTRNSVLSANYPFATIEPNVGVVPLPDPRLDKLAEIFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            ++ VPA V+FVDIAG+VKGASEGAGLGNKFLA+IRE +AICQV+RVF D D+ HV GRVD
Sbjct  61   EKTVPATVSFVDIAGIVKGASEGAGLGNKFLANIREANAICQVIRVFDDPDIVHVEGRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P +DIE + TELILADLQT+E+A  R+EKEART K ++P ++ A RA+++LD+G+TLF+A
Sbjct  121  PMADIETINTELILADLQTMEKALPRMEKEARTRKEKRPEFENAQRAKEILDSGRTLFSA  180

Query  181  G--VDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESEL  238
               VD   LREL+LLT KPFLYVFN+DE+VLTD AR  EL  LVAPADAVFLDA +ESEL
Sbjct  181  QNEVDLDGLRELSLLTAKPFLYVFNSDESVLTDEARRAELEKLVAPADAVFLDAKVESEL  240

Query  239  TELDDESAA-ELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPK  297
             ELDDE A  ELLES+GQ E GL ALARAGFHTL LQTFLTAGPKEARAWTI QG TAP+
Sbjct  241  LELDDEEAVRELLESVGQEEPGLHALARAGFHTLGLQTFLTAGPKEARAWTIPQGATAPQ  300

Query  298  AAGVIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            AAGVIHSDFE+GFIKAE+VS+DDLV AGSMAAA+AAGKVR+EGKDYVMADGDVVEFRFNV
Sbjct  301  AAGVIHSDFERGFIKAEVVSFDDLVEAGSMAAARAAGKVRMEGKDYVMADGDVVEFRFNV  360


>gi|331694837|ref|YP_004331076.1| GTP-binding protein YchF [Pseudonocardia dioxanivorans CB1190]
 gi|326949526|gb|AEA23223.1| GTP-binding protein YchF [Pseudonocardia dioxanivorans CB1190]
Length=357

 Score =  536 bits (1381),  Expect = 2e-150, Method: Compositional matrix adjust.
 Identities = 285/357 (80%), Positives = 314/357 (88%), Gaps = 0/357 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALTRN+V+AANYPFATIEPN GVV LPDPRLDKLAE+  S
Sbjct  1    MSLTLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGVVPLPDPRLDKLAEIHSS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
             ++VPA V+FVDIAG+VKGASEGAGLGNKFLA+IRE DAICQVVRVF DDDV HV G+VD
Sbjct  61   AKIVPATVSFVDIAGIVKGASEGAGLGNKFLANIRESDAICQVVRVFSDDDVVHVEGKVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P +DIE + TELILADLQTLE+A  RL KEAR  K R+ V +AA  A ++L++GKTLFAA
Sbjct  121  PAADIETIATELILADLQTLEKAVPRLTKEARMQKDRRAVLEAAEAAVEILNSGKTLFAA  180

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            GVD   LREL LLTTKPFLYVFNADE+VLTD AR  EL  LVAPADAVFLDA +ESEL E
Sbjct  181  GVDKEPLRELTLLTTKPFLYVFNADESVLTDDARRKELADLVAPADAVFLDAKVESELLE  240

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LD+ESA ELLESIGQ E GL +LARAGFHTL LQT+LTAGPKEARAWTI QG TAP+AAG
Sbjct  241  LDEESARELLESIGQPEPGLYSLARAGFHTLGLQTYLTAGPKEARAWTIKQGATAPQAAG  300

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            VIH+DFE+GFIKAEIVSYDDLVAAGSM AAKAAGKVR+EGKDYVMADGDVVEFRFNV
Sbjct  301  VIHTDFERGFIKAEIVSYDDLVAAGSMNAAKAAGKVRMEGKDYVMADGDVVEFRFNV  357


>gi|256374885|ref|YP_003098545.1| GTP-dependent nucleic acid-binding protein EngD [Actinosynnema 
mirum DSM 43827]
 gi|255919188|gb|ACU34699.1| GTP-binding protein YchF [Actinosynnema mirum DSM 43827]
Length=359

 Score =  533 bits (1373),  Expect = 1e-149, Method: Compositional matrix adjust.
 Identities = 279/359 (78%), Positives = 314/359 (88%), Gaps = 2/359 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALTRN+V+AANYPFATIEPN GVV LPD RL KLAE+FGS
Sbjct  1    MSLTLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGVVPLPDARLGKLAEVFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +R VPA V+FVDIAG+VKGASEGAGLGNKFLA+IRE +AICQVVRVF D DV HV  RVD
Sbjct  61   EREVPAVVSFVDIAGIVKGASEGAGLGNKFLANIREANAICQVVRVFDDSDVIHVDDRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P +DIE + TEL+LADLQTLE+A  RLEKEART K R+P  +AA +A+++LDAG+TLF+A
Sbjct  121  PVADIETINTELVLADLQTLEKAIPRLEKEARTQKDRRPALEAAQKAREILDAGRTLFSA  180

Query  181  G--VDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESEL  238
               VD   LREL+LLTTKPFLYVFNADE VLTD AR+ ELR LVAPADAVFLDA +E+EL
Sbjct  181  QAEVDGELLRELSLLTTKPFLYVFNADEGVLTDEARLKELRELVAPADAVFLDAKVEAEL  240

Query  239  TELDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKA  298
             ELD+ESA ELLESIGQ E GL ALARAGFHTL LQT+LTAGPKEARAWTI +G TAP+A
Sbjct  241  LELDEESARELLESIGQHEPGLHALARAGFHTLGLQTYLTAGPKEARAWTIPKGATAPQA  300

Query  299  AGVIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            AGVIH+DFE+GFIKAE+VS+ DLV  GSMAAAKAAGKVR+EGKDYVM DGDVVEFRFNV
Sbjct  301  AGVIHTDFERGFIKAEVVSFADLVETGSMAAAKAAGKVRMEGKDYVMVDGDVVEFRFNV  359


>gi|326381379|ref|ZP_08203073.1| GTP-binding protein YchF [Gordonia neofelifaecis NRRL B-59395]
 gi|326199626|gb|EGD56806.1| GTP-binding protein YchF [Gordonia neofelifaecis NRRL B-59395]
Length=359

 Score =  533 bits (1373),  Expect = 2e-149, Method: Compositional matrix adjust.
 Identities = 275/359 (77%), Positives = 314/359 (88%), Gaps = 2/359 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALTRN+V+AANYPFATIEPN GVV LPD RLD+LAE+FGS
Sbjct  1    MSLTLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGVVELPDARLDRLAEIFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +R++PA V+FVDIAG+VKGASEG G+GN+FLA+IRE DAICQVVRVF DDDV HV GRVD
Sbjct  61   ERILPAVVSFVDIAGIVKGASEGEGMGNQFLANIREADAICQVVRVFADDDVVHVDGRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P++DIEV+ETELILAD+QTLE+A  RLEKEA+ NK +  + DAA +AQ VLD+GKTLF+A
Sbjct  121  PRADIEVIETELILADMQTLEKAIPRLEKEAKKNKDQAEILDAAKKAQAVLDSGKTLFSA  180

Query  181  G--VDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESEL  238
                D +++REL+LLT KPFLYVFNADE+VLTD AR  ELR  VAPAD+VFLDA +ESEL
Sbjct  181  KDTFDLSSVRELHLLTAKPFLYVFNADESVLTDDARKQELRDAVAPADSVFLDAKVESEL  240

Query  239  TELDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKA  298
             ELD+E A ELL+SIGQ E GL  LARAGFHTL LQT+LTAGPKEARAWTI QGDTAPKA
Sbjct  241  LELDEEDAQELLDSIGQDEPGLRQLARAGFHTLGLQTYLTAGPKEARAWTIRQGDTAPKA  300

Query  299  AGVIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            AGVIH+DFEKGFIKAEIVS+ DL   GSM AAKAAGKVR+EGK+YVM DGDVVEFRFNV
Sbjct  301  AGVIHTDFEKGFIKAEIVSFTDLDENGSMNAAKAAGKVRMEGKEYVMVDGDVVEFRFNV  359


>gi|226365350|ref|YP_002783133.1| GTP-dependent nucleic acid-binding protein EngD [Rhodococcus 
opacus B4]
 gi|226243840|dbj|BAH54188.1| putative GTP-binding protein [Rhodococcus opacus B4]
Length=359

 Score =  532 bits (1370),  Expect = 4e-149, Method: Compositional matrix adjust.
 Identities = 282/359 (79%), Positives = 323/359 (90%), Gaps = 2/359 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALT N+V+AANYPFATIEPN G+V LPDPRL KLAE+FGS
Sbjct  1    MSLTLGIVGLPNVGKSTLFNALTNNDVLAANYPFATIEPNVGLVELPDPRLSKLAEIFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +R++PA V+FVDIAG+VKGASEGAGLGNKFLA+IRE DAICQVVRVF DDDV HV GRVD
Sbjct  61   ERILPATVSFVDIAGIVKGASEGAGLGNKFLANIREADAICQVVRVFHDDDVVHVDGRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P SDIEV+ETEL++AD+QTLE+A  RLEKEA+ NK  KP+++ AL+AQ+VLD+GKTLF+A
Sbjct  121  PASDIEVIETELVIADMQTLEKALPRLEKEAKKNKELKPIHEEALKAQEVLDSGKTLFSA  180

Query  181  G--VDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESEL  238
               +D   LREL+LLTTKPFLYVFNADE+VLTD A+V ELRA VAPADAVFLDA +E EL
Sbjct  181  KDKLDFTLLRELSLLTTKPFLYVFNADESVLTDEAKVAELRASVAPADAVFLDAKVEQEL  240

Query  239  TELDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKA  298
             ELD+E   E+L+SIGQSE GL ALAR GFHTL LQT+LTAGPKE+RAWTIH+GDTAP+A
Sbjct  241  LELDEEDRQEMLDSIGQSEPGLHALARTGFHTLGLQTYLTAGPKESRAWTIHKGDTAPQA  300

Query  299  AGVIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            AGVIH+DFE+GFIKAEIVS+DDLVAAGSMAAAKAAGKVR+EGKDY MADGDVVEFRFNV
Sbjct  301  AGVIHTDFERGFIKAEIVSFDDLVAAGSMAAAKAAGKVRMEGKDYTMADGDVVEFRFNV  359


>gi|300789861|ref|YP_003770152.1| translation-associated GTPase [Amycolatopsis mediterranei U32]
 gi|299799375|gb|ADJ49750.1| translation-associated GTPase [Amycolatopsis mediterranei U32]
 gi|340531532|gb|AEK46737.1| GTP-binding protein YchF [Amycolatopsis mediterranei S699]
Length=360

 Score =  530 bits (1366),  Expect = 1e-148, Method: Compositional matrix adjust.
 Identities = 280/360 (78%), Positives = 316/360 (88%), Gaps = 3/360 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALTRN+V+AANYPFATIEPN GVV LPDPRLDKLAEL  S
Sbjct  1    MSLTLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGVVPLPDPRLDKLAELHKS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +++VPA V+FVDIAG+VKGASEGAGLGNKFLA+IRE +AICQV+RVF D DV HV GR+D
Sbjct  61   EKIVPAVVSFVDIAGIVKGASEGAGLGNKFLANIREANAICQVIRVFDDPDVVHVDGRID  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P SDIE + TELILADLQTL++A  RLEKEART K  KP  D A +A+++LDAG+TLF A
Sbjct  121  PSSDIETINTELILADLQTLDKALPRLEKEARTKKENKPALDNAQKAKEILDAGRTLFQA  180

Query  181  G--VDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESEL  238
               VD  ALREL+LLTTKPFLYVFNADE+VLTD AR  EL  LVAPADAVFLDA +E+EL
Sbjct  181  QKEVDFDALRELSLLTTKPFLYVFNADESVLTDEARREELTKLVAPADAVFLDAKVEAEL  240

Query  239  TELDD-ESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPK  297
             ELDD ES  ELLES+GQ E GL +LARAGFHTL LQT+LTAGPKE+RAWTI QG TAP+
Sbjct  241  LELDDEESVRELLESVGQPEPGLYSLARAGFHTLGLQTYLTAGPKESRAWTIPQGATAPQ  300

Query  298  AAGVIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            AAGVIH+DFE+GFIKAEIVSYDDL+AAGSMAAA+AAGKVR+EGKDY+MADGDVVEFRFNV
Sbjct  301  AAGVIHTDFERGFIKAEIVSYDDLMAAGSMAAARAAGKVRMEGKDYIMADGDVVEFRFNV  360


>gi|262203275|ref|YP_003274483.1| GTP-binding protein YchF [Gordonia bronchialis DSM 43247]
 gi|262086622|gb|ACY22590.1| GTP-binding protein YchF [Gordonia bronchialis DSM 43247]
Length=359

 Score =  530 bits (1365),  Expect = 1e-148, Method: Compositional matrix adjust.
 Identities = 276/359 (77%), Positives = 317/359 (89%), Gaps = 2/359 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALTRN+V+AANYPFATIEPN GVV LPD RL++LAE+FGS
Sbjct  1    MSLTLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNIGVVELPDSRLERLAEIFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +R++PA V+FVDIAG+VKGASEG G+GN+FLA+IRE DAICQVVRVF DDDV HV GRVD
Sbjct  61   ERILPATVSFVDIAGIVKGASEGEGMGNQFLANIREADAICQVVRVFADDDVVHVDGRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P SDIEV+ETELILADLQTLE+A  RLEK+AR NK       AA +AQ++L++GKTLF+ 
Sbjct  121  PLSDIEVIETELILADLQTLEKALPRLEKDARKNKDLAETVAAAQKAQEILNSGKTLFSQ  180

Query  181  --GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESEL  238
                D  A+REL+L+TTKPFLYVFN+DE+VLTD AR  EL+A +APADAVFLDA +ESEL
Sbjct  181  KDSFDHTAVRELHLMTTKPFLYVFNSDESVLTDDARKAELKAAIAPADAVFLDAKVESEL  240

Query  239  TELDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKA  298
             ELDD  A ELL+SIGQ E GL +LARAGFHTL LQT+LTAGPKE+RAWTIH+GDTAPKA
Sbjct  241  LELDDADAQELLDSIGQDEPGLRSLARAGFHTLGLQTYLTAGPKESRAWTIHRGDTAPKA  300

Query  299  AGVIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            AGVIH+DFEKGFIKAEIVS++DL AAGSMAAAKAAGKVR+EGKDYVMADGDVVEFRFNV
Sbjct  301  AGVIHTDFEKGFIKAEIVSFEDLDAAGSMAAAKAAGKVRMEGKDYVMADGDVVEFRFNV  359


>gi|111022842|ref|YP_705814.1| GTP-dependent nucleic acid-binding protein EngD [Rhodococcus 
jostii RHA1]
 gi|110822372|gb|ABG97656.1| probable GTP binding protein [Rhodococcus jostii RHA1]
Length=359

 Score =  528 bits (1361),  Expect = 4e-148, Method: Compositional matrix adjust.
 Identities = 280/359 (78%), Positives = 323/359 (90%), Gaps = 2/359 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALT N+V+AANYPFATIEPN G+V LPDPRL +LA +FGS
Sbjct  1    MSLTLGIVGLPNVGKSTLFNALTNNDVLAANYPFATIEPNVGLVELPDPRLSELARIFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +R++PA V+FVDIAG+VKGASEGAGLGNKFLA+IRE DAICQVVRVF DDDV HV GRVD
Sbjct  61   ERILPATVSFVDIAGIVKGASEGAGLGNKFLANIREADAICQVVRVFNDDDVVHVDGRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P SDIEV+ETEL++AD+QTLE+A  RLEKEA+ NK  KP+++ AL+AQ+VLD GKTLF+A
Sbjct  121  PASDIEVIETELVIADMQTLEKALPRLEKEAKKNKELKPIHEEALKAQEVLDEGKTLFSA  180

Query  181  G--VDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESEL  238
               +D + LREL+LLTTKPFLYVFNADEAVLTD A+V ELRA VAPADAVFLDA +E EL
Sbjct  181  KDKLDFSLLRELSLLTTKPFLYVFNADEAVLTDDAKVAELRASVAPADAVFLDAKVEQEL  240

Query  239  TELDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKA  298
             ELD+E   E+L+SIGQSE GL ALAR GFHTL LQT+LTAGPKE+RAWTIH+GDTAP+A
Sbjct  241  LELDEEDRQEMLDSIGQSEPGLHALARTGFHTLGLQTYLTAGPKESRAWTIHKGDTAPQA  300

Query  299  AGVIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            AGVIH+DFE+GFIKAEIVS+DDL+AAGSMAAAKAAGKVR+EGKDY+MADGDVVEFRFNV
Sbjct  301  AGVIHTDFERGFIKAEIVSFDDLIAAGSMAAAKAAGKVRMEGKDYIMADGDVVEFRFNV  359


>gi|172040303|ref|YP_001800017.1| GTP-dependent nucleic acid-binding protein EngD [Corynebacterium 
urealyticum DSM 7109]
 gi|171851607|emb|CAQ04583.1| putative GTP-binding protein [Corynebacterium urealyticum DSM 
7109]
Length=361

 Score =  525 bits (1352),  Expect = 5e-147, Method: Compositional matrix adjust.
 Identities = 264/361 (74%), Positives = 303/361 (84%), Gaps = 4/361 (1%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALTRN+V+AANYPFATIEPNEG+V LPDPRLD+LAE++GS
Sbjct  1    MSLTLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNEGLVELPDPRLDRLAEIYGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +R++PA VTFVDIAG+VKGASEG G+GN FLA+IRE DAICQVVR F DD+V HV GRVD
Sbjct  61   ERILPATVTFVDIAGIVKGASEGEGMGNAFLANIREADAICQVVRAFTDDNVIHVDGRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P SDI V+ TELILADLQTLE+A  RLEKEAR +K      +   +AQ VL+  +TLFAA
Sbjct  121  PASDISVINTELILADLQTLEKALPRLEKEARKDKDVAGTVEEVKKAQAVLEDDRTLFAA  180

Query  181  G----VDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIES  236
                 VD   LREL+L+T KPFLYVFN+DE VLTD A+  ELR LVAPA+AVFLDA  E+
Sbjct  181  SKSGEVDLDLLRELHLMTAKPFLYVFNSDEDVLTDDAKKDELRKLVAPAEAVFLDAQSET  240

Query  237  ELTELDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAP  296
            +L ELD+E AAELL ++GQ+E GL  LA+AGF TL LQT+LTAGPKEARAWTIHQGDTAP
Sbjct  241  DLLELDEEDAAELLAAVGQNEPGLQTLAKAGFETLGLQTYLTAGPKEARAWTIHQGDTAP  300

Query  297  KAAGVIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFN  356
            KAAGVIHSDFE+GFIKAEIVS+ DL   GSMA A+AAGKVR EGK+YVM DGDVVEFRFN
Sbjct  301  KAAGVIHSDFERGFIKAEIVSFKDLDELGSMAEARAAGKVRQEGKEYVMVDGDVVEFRFN  360

Query  357  V  357
            V
Sbjct  361  V  361


>gi|296140787|ref|YP_003648030.1| GTP-binding protein YchF [Tsukamurella paurometabola DSM 20162]
 gi|296028921|gb|ADG79691.1| GTP-binding protein YchF [Tsukamurella paurometabola DSM 20162]
Length=357

 Score =  524 bits (1349),  Expect = 1e-146, Method: Compositional matrix adjust.
 Identities = 270/357 (76%), Positives = 307/357 (86%), Gaps = 0/357 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALT + V AANYPFATIEPN GVV+LPDPRLD+LAE+F S
Sbjct  1    MSLTLGIVGLPNVGKSTLFNALTNSEVEAANYPFATIEPNVGVVNLPDPRLDRLAEIFSS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +R++PA V+FVDIAG+VKGASEG G+GN+FL++IRE DAICQVVRVF D+DV HV G+VD
Sbjct  61   ERILPATVSFVDIAGIVKGASEGEGMGNQFLSNIREADAICQVVRVFSDEDVVHVAGKVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P +DI+ V TELILADLQTLE+A  RLEKEAR NK      +AA  AQ VL+ GKTLFAA
Sbjct  121  PLADIDTVATELILADLQTLEKALPRLEKEARKNKEVAETLEAAKAAQLVLEDGKTLFAA  180

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            G D   +REL+L+T KPFLYVFN+DE VLTD A+  EL A VAPAD+VFLDA IESEL E
Sbjct  181  GFDTTPIRELHLMTAKPFLYVFNSDEGVLTDAAKRAELAAAVAPADSVFLDAKIESELLE  240

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LD E  AE+LESIGQ E GLD+LARAGFHTL LQT+LTAGPKE+RAWTI +GDTAPKAAG
Sbjct  241  LDPEDQAEMLESIGQDEPGLDSLARAGFHTLGLQTYLTAGPKESRAWTIRKGDTAPKAAG  300

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            VIH+DFEKGFIKAEIVS+ DL A G+MAAAKAAGKVR+EGKDYVMADGDVVEFRFNV
Sbjct  301  VIHTDFEKGFIKAEIVSFADLDANGTMAAAKAAGKVRMEGKDYVMADGDVVEFRFNV  357


>gi|258654485|ref|YP_003203641.1| GTP-dependent nucleic acid-binding protein EngD [Nakamurella 
multipartita DSM 44233]
 gi|258557710|gb|ACV80652.1| GTP-binding protein YchF [Nakamurella multipartita DSM 44233]
Length=359

 Score =  523 bits (1346),  Expect = 2e-146, Method: Compositional matrix adjust.
 Identities = 283/359 (79%), Positives = 315/359 (88%), Gaps = 2/359 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKST+FNALT+ NV+AANYPFATIEPN GVV +PDPRLD+LAE+FGS
Sbjct  1    MSLTLGIVGLPNVGKSTVFNALTKANVLAANYPFATIEPNIGVVPIPDPRLDRLAEVFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
             + VPA V+FVDIAG+VKGASEGAGLGNKFLA+IRE DAICQVVRVF DDDV HV GRVD
Sbjct  61   AKTVPAVVSFVDIAGIVKGASEGAGLGNKFLANIREADAICQVVRVFADDDVVHVDGRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P SDIE + TELILADLQTLE+A  RLEKEAR  K R PV  AA  A +VL+AG TLFAA
Sbjct  121  PLSDIETINTELILADLQTLEKAIPRLEKEARNAKDRAPVLAAAKMANEVLNAGSTLFAA  180

Query  181  G--VDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESEL  238
            G  VD   L+EL+L+T KPFLYVFNADEAVLTD A+  EL A VAPADAVFLDA +E EL
Sbjct  181  GKRVDLTLLKELSLMTAKPFLYVFNADEAVLTDEAKRAELLAAVAPADAVFLDAKVEHEL  240

Query  239  TELDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKA  298
             ELD+ESA ELLES+GQSE GL ALARAGFHTL LQT+LTAGPKEARAWTIH+GDTAP+A
Sbjct  241  LELDEESARELLESVGQSEPGLHALARAGFHTLGLQTYLTAGPKEARAWTIHKGDTAPQA  300

Query  299  AGVIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            AGVIH+DFE+GFIKAEIVS+DDL+AAGSMAAAKA G+VR+EGKDYVMADGDVVEFRFNV
Sbjct  301  AGVIHTDFERGFIKAEIVSFDDLIAAGSMAAAKAGGRVRMEGKDYVMADGDVVEFRFNV  359


>gi|226307711|ref|YP_002767671.1| GTP-binding protein [Rhodococcus erythropolis PR4]
 gi|226186828|dbj|BAH34932.1| probable GTP-binding protein [Rhodococcus erythropolis PR4]
Length=359

 Score =  521 bits (1343),  Expect = 5e-146, Method: Compositional matrix adjust.
 Identities = 277/359 (78%), Positives = 318/359 (89%), Gaps = 2/359 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALT N+V+AANYPFATIEPN G+V LPDPRL KLAE+FGS
Sbjct  1    MSLTLGIVGLPNVGKSTLFNALTNNDVLAANYPFATIEPNVGLVELPDPRLQKLAEIFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +R++PA V+FVDIAG+VKGASEGAGLGNKFLA+IRE DAICQVVRVF DDDV HV G+VD
Sbjct  61   ERILPATVSFVDIAGIVKGASEGAGLGNKFLANIREADAICQVVRVFADDDVIHVDGKVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P SDIEV+ETEL++AD+QTLE+A  RL+KEAR NK  KP +D AL+AQ  L+ G TLF+ 
Sbjct  121  PASDIEVIETELVIADMQTLEKALPRLDKEARKNKELKPAHDEALKAQAFLNEGTTLFSV  180

Query  181  G--VDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESEL  238
               +D + LREL+LLTTKPFLYVFNADE+VLTD A+V ELRA VAPADAVFLDA +E EL
Sbjct  181  KDKLDFSLLRELSLLTTKPFLYVFNADESVLTDAAKVAELRASVAPADAVFLDAKVEQEL  240

Query  239  TELDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKA  298
             ELD+E   E+L+SIGQ+E GL ALAR GFHTL LQT+LTAGPKEARAWTIH+GDTAP+A
Sbjct  241  LELDEEDRQEMLDSIGQTEPGLHALARTGFHTLGLQTYLTAGPKEARAWTIHKGDTAPQA  300

Query  299  AGVIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            AGVIH+DFE+GFIKAEIVS+DDLV AGSMAAAKAAGKVR+EGK+YVMADGDVVEFRFNV
Sbjct  301  AGVIHTDFERGFIKAEIVSFDDLVEAGSMAAAKAAGKVRMEGKEYVMADGDVVEFRFNV  359


>gi|229493951|ref|ZP_04387723.1| GTP-binding protein YchF [Rhodococcus erythropolis SK121]
 gi|229319228|gb|EEN85077.1| GTP-binding protein YchF [Rhodococcus erythropolis SK121]
Length=359

 Score =  521 bits (1342),  Expect = 6e-146, Method: Compositional matrix adjust.
 Identities = 276/359 (77%), Positives = 318/359 (89%), Gaps = 2/359 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALT N+V+AANYPFATIEPN G+V LPDPRL KLAE+FGS
Sbjct  1    MSLTLGIVGLPNVGKSTLFNALTNNDVLAANYPFATIEPNVGLVELPDPRLQKLAEIFGS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +R++PA V+FVDIAG+VKGASEGAGLGNKFLA+IRE DAICQVVRVF DDDV HV G+VD
Sbjct  61   ERILPATVSFVDIAGIVKGASEGAGLGNKFLANIREADAICQVVRVFADDDVIHVDGKVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P SDIEV+ETEL++AD+QTLE+A  RL+KEAR NK  KP +D AL+AQ  L+ G TLF+ 
Sbjct  121  PASDIEVIETELVIADMQTLEKALPRLDKEARKNKELKPAHDEALKAQAFLNEGTTLFSV  180

Query  181  G--VDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESEL  238
               +D + LREL+LLTTKPFLYVFNADE+VLTD A++ ELRA VAPADAVFLDA +E EL
Sbjct  181  KDKLDFSLLRELSLLTTKPFLYVFNADESVLTDAAKIAELRASVAPADAVFLDAKVEQEL  240

Query  239  TELDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKA  298
             ELD+E   E+L+SIGQ+E GL ALAR GFHTL LQT+LTAGPKEARAWTIH+GDTAP+A
Sbjct  241  LELDEEDRQEMLDSIGQTEPGLHALARTGFHTLGLQTYLTAGPKEARAWTIHKGDTAPQA  300

Query  299  AGVIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            AGVIH+DFE+GFIKAEIVS+DDLV AGSMAAAKAAGKVR+EGK+YVMADGDVVEFRFNV
Sbjct  301  AGVIHTDFERGFIKAEIVSFDDLVEAGSMAAAKAAGKVRMEGKEYVMADGDVVEFRFNV  359


>gi|260577667|ref|ZP_05845603.1| GTP-dependent nucleic acid-binding protein EngD [Corynebacterium 
jeikeium ATCC 43734]
 gi|258604213|gb|EEW17454.1| GTP-dependent nucleic acid-binding protein EngD [Corynebacterium 
jeikeium ATCC 43734]
Length=383

 Score =  521 bits (1341),  Expect = 9e-146, Method: Compositional matrix adjust.
 Identities = 259/361 (72%), Positives = 305/361 (85%), Gaps = 4/361 (1%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            V+L+LGIVGLPNVGKSTLFNALTRN+V+AANYPFATIEPN G+V LPDPRL +LAE+F S
Sbjct  23   VTLTLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGLVELPDPRLTRLAEIFES  82

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +R++PA V+FVDIAG+VKGAS+G G+GN FLA+IRE DAICQVVR F DD+V HV GRVD
Sbjct  83   ERILPATVSFVDIAGIVKGASDGEGMGNAFLANIREADAICQVVRAFSDDNVIHVDGRVD  142

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P SDI V+ETELILADLQT+E+A  RLEKEAR NK      + A +AQ++L+  +TL +A
Sbjct  143  PASDISVIETELILADLQTVEKALPRLEKEARKNKDLAEQVEGAKKAQEILEDSRTLSSA  202

Query  181  G----VDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIES  236
                 +D A +R+L+ LT KPFLYVFN+DE+VLTD A+  ELR LVAPAD VFLDAA E+
Sbjct  203  AAQGEIDLATVRDLHFLTAKPFLYVFNSDESVLTDDAKKAELRELVAPADCVFLDAATEA  262

Query  237  ELTELDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAP  296
            +L ELDDE AAELLES+GQ+E GL  LA+AGF TL LQT+LTAGPKEARAWTIHQGDTAP
Sbjct  263  DLLELDDEEAAELLESVGQTEPGLQTLAKAGFATLGLQTYLTAGPKEARAWTIHQGDTAP  322

Query  297  KAAGVIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFN  356
            +AAGVIH+DFEKGFIKAEIV+++DL   GSMA A+A GKVR EGKDYVMADGDVVEF+FN
Sbjct  323  QAAGVIHTDFEKGFIKAEIVAFEDLDELGSMAEARAHGKVRQEGKDYVMADGDVVEFKFN  382

Query  357  V  357
            V
Sbjct  383  V  383


>gi|324997182|ref|ZP_08118294.1| GTP-binding protein YchF [Pseudonocardia sp. P1]
Length=357

 Score =  520 bits (1340),  Expect = 1e-145, Method: Compositional matrix adjust.
 Identities = 280/357 (79%), Positives = 311/357 (88%), Gaps = 0/357 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALTRN+V+AANYPFATIEPN GVV LPDPRLDKLAE+F S
Sbjct  1    MSLTLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGVVPLPDPRLDKLAEIFAS  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
             +++PA V+FVDIAG+VKGASEGAGLGNKFLA+IRE DAICQVVRVF D DV HV GR+D
Sbjct  61   DKILPATVSFVDIAGIVKGASEGAGLGNKFLANIRESDAICQVVRVFDDPDVVHVDGRID  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
              SDIE + TEL+LADLQTLE+A  RLEKEART K R+PV DAA  A  +L+ G+TLF A
Sbjct  121  AASDIETIATELVLADLQTLEKALPRLEKEARTQKDRRPVLDAAQAAAGILNEGRTLFQA  180

Query  181  GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESELTE  240
            G D + LREL LLTTKPFLYVFNADEAVL+D AR  EL  LVAPA AVFLDA +E+EL E
Sbjct  181  GADTSLLRELTLLTTKPFLYVFNADEAVLSDDARRKELTELVAPAQAVFLDAKVEAELLE  240

Query  241  LDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKAAG  300
            LDDESAAELLESIGQ E GL ALARAGF TL LQT+LTAGPKE+RAWTI QG TAP+AAG
Sbjct  241  LDDESAAELLESIGQDEAGLAALARAGFSTLGLQTYLTAGPKESRAWTIPQGATAPQAAG  300

Query  301  VIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            VIH+DFE+GFIKAEIVSYDDLVAAG++ AAKAAGKVR+EGKDYVM DGDVVEFRFNV
Sbjct  301  VIHTDFERGFIKAEIVSYDDLVAAGTINAAKAAGKVRMEGKDYVMHDGDVVEFRFNV  357


>gi|68536530|ref|YP_251235.1| translation-associated GTPase [Corynebacterium jeikeium K411]
 gi|68264129|emb|CAI37617.1| putative GTP-binding protein [Corynebacterium jeikeium K411]
Length=361

 Score =  520 bits (1339),  Expect = 2e-145, Method: Compositional matrix adjust.
 Identities = 258/361 (72%), Positives = 305/361 (85%), Gaps = 4/361 (1%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            ++L+LGIVGLPNVGKSTLFNALTRN+V+AANYPFATIEPN G+V LPDPRL +LAE+F S
Sbjct  1    MTLTLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGLVELPDPRLTRLAEIFES  60

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +R++PA V+FVDIAG+VKGAS+G G+GN FLA+IRE DAICQVVR F DD+V HV GRVD
Sbjct  61   ERILPATVSFVDIAGIVKGASDGEGMGNAFLANIREADAICQVVRAFSDDNVIHVDGRVD  120

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P SDI V+ETELILADLQT+E+A  RLEKEAR NK      + A +AQ++L+  +TL +A
Sbjct  121  PASDISVIETELILADLQTVEKALPRLEKEARKNKDLAEQVEGAKKAQEILEDSRTLSSA  180

Query  181  G----VDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIES  236
                 +D A +R+L+ LT KPFLYVFN+DE+VLTD A+  ELR LVAPAD VFLDAA E+
Sbjct  181  AAQGEIDLATVRDLHFLTAKPFLYVFNSDESVLTDDAKKAELRELVAPADCVFLDAATEA  240

Query  237  ELTELDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAP  296
            +L ELDDE AAELLES+GQ+E GL  LA+AGF TL LQT+LTAGPKEARAWTIHQGDTAP
Sbjct  241  DLLELDDEEAAELLESVGQTEPGLQTLAKAGFATLGLQTYLTAGPKEARAWTIHQGDTAP  300

Query  297  KAAGVIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFN  356
            +AAGVIH+DFEKGFIKAEIV+++DL   GSMA A+A GKVR EGKDYVMADGDVVEF+FN
Sbjct  301  QAAGVIHTDFEKGFIKAEIVAFEDLDELGSMAEARAHGKVRQEGKDYVMADGDVVEFKFN  360

Query  357  V  357
            V
Sbjct  361  V  361


>gi|336326131|ref|YP_004606097.1| hypothetical protein CRES_1581 [Corynebacterium resistens DSM 
45100]
 gi|336102113|gb|AEI09933.1| hypothetical protein CRES_1581 [Corynebacterium resistens DSM 
45100]
Length=378

 Score =  518 bits (1333),  Expect = 7e-145, Method: Compositional matrix adjust.
 Identities = 259/361 (72%), Positives = 304/361 (85%), Gaps = 4/361 (1%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            V+L+LGIVGLPNVGKSTLFNALTRN+V+AANYPFATIEPN G+V LPDPRL++LAE+FGS
Sbjct  12   VTLTLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGLVELPDPRLNRLAEIFGS  71

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            +RV+PA V+FVDIAG+VKGAS+G G+GN FLA+IRE DAICQVVR F DD+V HV GRVD
Sbjct  72   ERVLPATVSFVDIAGIVKGASDGEGMGNAFLANIREADAICQVVRAFSDDNVIHVDGRVD  131

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            PQ+DI V+ETELILADLQT+E+A  RLEKEAR NK      D A +AQ++L+ G+TL +A
Sbjct  132  PQADISVIETELILADLQTVEKALPRLEKEARKNKELAEQVDGAKKAQEILEDGRTLSSA  191

Query  181  G----VDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIES  236
                 +D A +R+L+ LT KPFLYVFN+DEAVLTD A+  ELR LVAPAD VFLDAA E+
Sbjct  192  AAKGELDLATVRDLHFLTAKPFLYVFNSDEAVLTDDAKKQELRDLVAPADCVFLDAATEA  251

Query  237  ELTELDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAP  296
            EL ELDD+ AAELL S+GQ E GL  LA+AGF TL LQT+LTAGPKE+RAWTI QG TAP
Sbjct  252  ELLELDDDEAAELLASVGQDEPGLQTLAKAGFATLGLQTYLTAGPKESRAWTIRQGSTAP  311

Query  297  KAAGVIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFN  356
            +AAGVIHSDFE+GFIKAEIV+++DL A GSMA A+AAGKVR EGKDYVM DGDVVEFR  
Sbjct  312  QAAGVIHSDFERGFIKAEIVAFEDLDALGSMAEARAAGKVRQEGKDYVMVDGDVVEFRTG  371

Query  357  V  357
            +
Sbjct  372  I  372


>gi|116671377|ref|YP_832310.1| GTP-dependent nucleic acid-binding protein EngD [Arthrobacter 
sp. FB24]
 gi|116611486|gb|ABK04210.1| GTP-binding protein YchF [Arthrobacter sp. FB24]
Length=368

 Score =  516 bits (1328),  Expect = 3e-144, Method: Compositional matrix adjust.
 Identities = 256/361 (71%), Positives = 300/361 (84%), Gaps = 4/361 (1%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            V+L++GIVGLPNVGKSTLFNALTRN V+AANYPFATIEPN GVV+LPDPRL KLA +FGS
Sbjct  8    VALTIGIVGLPNVGKSTLFNALTRNQVLAANYPFATIEPNVGVVNLPDPRLAKLAAVFGS  67

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
            QR++PAPV+FVDIAG+VKGASEG GLGNKFLA+IRE +AI QVVRVF D DV HV G+VD
Sbjct  68   QRLLPAPVSFVDIAGIVKGASEGEGLGNKFLANIREAEAIAQVVRVFDDPDVIHVDGKVD  127

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P+SD+E + TELILADLQT+E A  R+EKE +  K       A   AQ VL+ G T+F++
Sbjct  128  PRSDMETINTELILADLQTIENAIPRIEKEVKIKKREAAELAAIKAAQAVLERGDTIFSS  187

Query  181  ----GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIES  236
                 ++   L+EL+LLT KPF+YVFNADE +L +P +  ELRA+VAPADAVFLDA +ES
Sbjct  188  VKSDKLEMEHLKELSLLTAKPFIYVFNADEGILGNPEKQEELRAMVAPADAVFLDAKLES  247

Query  237  ELTELDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAP  296
            +L ELD+E A E+LE  GQ E GLD LAR GFHTL LQT+LTAGPKE RAWTIHQGDTAP
Sbjct  248  DLVELDEEEAREMLEMNGQDESGLDQLARVGFHTLGLQTYLTAGPKETRAWTIHQGDTAP  307

Query  297  KAAGVIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFN  356
            +AAGVIHSDF++GFIKAE+VS+DDL+ AGSMA AKA GKVRIEGK+YVMADGDVVEFRFN
Sbjct  308  QAAGVIHSDFQRGFIKAEVVSFDDLMEAGSMAEAKARGKVRIEGKEYVMADGDVVEFRFN  367

Query  357  V  357
            V
Sbjct  368  V  368


>gi|237785196|ref|YP_002905901.1| GTP-dependent nucleic acid-binding protein EngD [Corynebacterium 
kroppenstedtii DSM 44385]
 gi|237758108|gb|ACR17358.1| putative GTP-binding protein [Corynebacterium kroppenstedtii 
DSM 44385]
Length=370

 Score =  515 bits (1326),  Expect = 5e-144, Method: Compositional matrix adjust.
 Identities = 267/359 (75%), Positives = 302/359 (85%), Gaps = 2/359 (0%)

Query  1    VSLSLGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGS  60
            +SL+LGIVGLPNVGKSTLFNALTRNNV+AANYPFATIEPN G+V LPD RL +LAE+F S
Sbjct  12   MSLTLGIVGLPNVGKSTLFNALTRNNVLAANYPFATIEPNVGLVELPDARLKRLAEMFDS  71

Query  61   QRVVPAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFVDDDVTHVTGRVD  120
              ++PA V+FVDIAG+VKGASEG GLGN+FLA+IRE DAICQVVR F DDDV HV G+VD
Sbjct  72   AEIIPATVSFVDIAGIVKGASEGEGLGNQFLANIREADAICQVVRAFTDDDVVHVDGKVD  131

Query  121  PQSDIEVVETELILADLQTLERATGRLEKEARTNKARKPVYDAALRAQQVLDAGKTLFAA  180
            P SDI+V+ETELILADLQTLE+A  RLEKEA+ +K +    DA   A +VL+ G TLF+A
Sbjct  132  PSSDIDVIETELILADLQTLEKALPRLEKEAKKDKDKAAERDAVGEALKVLEDGHTLFSA  191

Query  181  --GVDAAALRELNLLTTKPFLYVFNADEAVLTDPARVGELRALVAPADAVFLDAAIESEL  238
               VD +AL+ELNLLT KPFLYVFN+DEAVLTD A+  EL  LVAPA AVFLDA  E+EL
Sbjct  192  KDSVDLSALKELNLLTAKPFLYVFNSDEAVLTDEAKKKELTELVAPAQAVFLDAETEAEL  251

Query  239  TELDDESAAELLESIGQSERGLDALARAGFHTLKLQTFLTAGPKEARAWTIHQGDTAPKA  298
             ELDD+ AAELL S+GQ E GL+ LARAGF TL LQT+LTAGPKEARAWTIHQGDTAP+A
Sbjct  252  LELDDDEAAELLASVGQDEPGLNKLARAGFATLGLQTYLTAGPKEARAWTIHQGDTAPQA  311

Query  299  AGVIHSDFEKGFIKAEIVSYDDLVAAGSMAAAKAAGKVRIEGKDYVMADGDVVEFRFNV  357
            AGVIHSDFE+GFIKAEIVSYDDL   GSMA A+A GKVR EGKDYVM DGDVVEF+FNV
Sbjct  312  AGVIHSDFERGFIKAEIVSYDDLNELGSMAEARAHGKVRQEGKDYVMQDGDVVEFKFNV  370



Lambda     K      H
   0.318    0.134    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 670036296356


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40