BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1113 Length=65 Score E Sequences producing significant alignments: (Bits) Value gi|15608253|ref|NP_215629.1| hypothetical protein Rv1113 [Mycoba... 123 9e-27 gi|297633653|ref|ZP_06951433.1| antitoxin [Mycobacterium tubercu... 114 4e-24 gi|118465443|ref|YP_880484.1| hypothetical protein MAV_1239 [Myc... 95.5 3e-18 gi|254819698|ref|ZP_05224699.1| hypothetical protein MintA_07234... 95.1 3e-18 gi|336458729|gb|EGO37689.1| hypothetical protein (DUF2191) [Myco... 94.0 7e-18 gi|84494707|ref|ZP_00993826.1| hypothetical protein JNB_07914 [J... 90.1 1e-16 gi|325067824|ref|ZP_08126497.1| antitoxin [Actinomyces oris K20]... 85.9 2e-15 gi|343522886|ref|ZP_08759852.1| hypothetical protein HMPREF9058_... 84.3 6e-15 gi|311111851|ref|YP_003983073.1| hypothetical protein HMPREF0733... 82.0 3e-14 gi|320094347|ref|ZP_08026135.1| hypothetical protein HMPREF9005_... 81.6 4e-14 gi|315606070|ref|ZP_07881101.1| conserved hypothetical protein [... 80.5 7e-14 gi|320532938|ref|ZP_08033699.1| toxin-antitoxin system protein [... 80.5 8e-14 gi|300741952|ref|ZP_07071973.1| toxin-antitoxin system, antitoxi... 80.1 1e-13 gi|325982849|ref|YP_004295251.1| hypothetical protein NAL212_226... 79.3 2e-13 gi|329894755|ref|ZP_08270557.1| hypothetical protein IMCC3088_96... 78.2 3e-13 gi|241518440|ref|YP_002979068.1| hypothetical protein Rleg_5720 ... 77.4 6e-13 gi|115359424|ref|YP_776562.1| hypothetical protein Bamb_4678 [Bu... 77.4 6e-13 gi|107025405|ref|YP_622916.1| hypothetical protein Bcen_3047 [Bu... 77.4 7e-13 gi|325168548|ref|YP_004280338.1| hypothetical protein AGROH133_1... 76.3 2e-12 gi|78061182|ref|YP_371090.1| hypothetical protein Bcep18194_B033... 75.9 2e-12 gi|220933795|ref|YP_002512694.1| hypothetical protein Tgr7_0611 ... 75.9 2e-12 gi|148265881|ref|YP_001232587.1| hypothetical protein Gura_3864 ... 75.9 2e-12 gi|294012926|ref|YP_003546386.1| hypothetical protein SJA_C1-294... 73.9 8e-12 gi|222147548|ref|YP_002548505.1| hypothetical protein Avi_0702 [... 72.0 3e-11 gi|87125281|ref|ZP_01081127.1| hypothetical protein RS9917_07685... 72.0 3e-11 gi|88813562|ref|ZP_01128795.1| hypothetical protein NB231_02995 ... 71.6 3e-11 gi|56130786|ref|YP_145689.1| hypothetical protein pMOL30_157 [Ra... 71.2 4e-11 gi|90426272|ref|YP_534642.1| hypothetical protein RPC_4801 [Rhod... 70.9 6e-11 gi|87303158|ref|ZP_01085956.1| hypothetical protein WH5701_06626... 70.5 7e-11 gi|198283414|ref|YP_002219735.1| hypothetical protein Lferr_1290... 70.5 7e-11 gi|218667623|ref|YP_002426006.1| hypothetical protein AFE_1579 [... 70.5 7e-11 gi|339328580|ref|YP_004688272.1| antitoxin of a toxin/antitoxin ... 70.5 8e-11 gi|18121448|gb|AAK52344.1| unknown [Burkholderia sacchari] 70.5 8e-11 gi|241763423|ref|ZP_04761477.1| conserved hypothetical protein [... 70.5 8e-11 gi|198282374|ref|YP_002218695.1| hypothetical protein Lferr_0230... 70.1 1e-10 gi|154247847|ref|YP_001418805.1| hypothetical protein Xaut_3924 ... 69.7 2e-10 gi|339482362|ref|YP_004694148.1| hypothetical protein Nit79A3_08... 69.3 2e-10 gi|124516227|gb|EAY57735.1| conserved hypothetical protein [Lept... 68.9 2e-10 gi|56130648|ref|YP_145551.1| hypothetical protein pMOL30_021 [Ra... 68.2 4e-10 gi|226946669|ref|YP_002801742.1| hypothetical protein Avin_46620... 67.8 5e-10 gi|254417870|ref|ZP_05031594.1| hypothetical protein BBAL3_180 [... 67.8 5e-10 gi|116695149|ref|YP_840725.1| hypothetical protein H16_B1205 [Ra... 67.4 7e-10 gi|258592600|emb|CBE68909.1| conserved protein of unknown functi... 67.4 7e-10 gi|158520427|ref|YP_001528297.1| hypothetical protein Dole_0410 ... 67.0 8e-10 gi|253990251|ref|YP_003041607.1| hypothetical protein PAU_02774 ... 67.0 9e-10 gi|37526271|ref|NP_929615.1| hypothetical protein plu2369 [Photo... 66.6 1e-09 gi|56476545|ref|YP_158134.1| hypothetical protein ebB60 [Aromato... 66.6 1e-09 gi|222056351|ref|YP_002538713.1| hypothetical protein Geob_3269 ... 66.2 2e-09 gi|56130745|ref|YP_145648.1| hypothetical protein pMOL30_117 [Ra... 65.9 2e-09 gi|170695112|ref|ZP_02886260.1| conserved hypothetical protein [... 65.1 3e-09 >gi|15608253|ref|NP_215629.1| hypothetical protein Rv1113 [Mycobacterium tuberculosis H37Rv] gi|15840550|ref|NP_335587.1| hypothetical protein MT1143.1 [Mycobacterium tuberculosis CDC1551] gi|31792306|ref|NP_854799.1| hypothetical protein Mb1143 [Mycobacterium bovis AF2122/97] 76 more sequence titles Length=65 Score = 123 bits (309), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 65/65 (100%), Positives = 65/65 (100%), Gaps = 0/65 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR Sbjct 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 Query 61 RTSPR 65 RTSPR Sbjct 61 RTSPR 65 >gi|297633653|ref|ZP_06951433.1| antitoxin [Mycobacterium tuberculosis KZN 4207] Length=61 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 60/61 (99%), Positives = 61/61 (100%), Gaps = 0/61 (0%) Query 5 VTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRRRTSP 64 +TVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRRRTSP Sbjct 1 MTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRRRTSP 60 Query 65 R 65 R Sbjct 61 R 61 >gi|118465443|ref|YP_880484.1| hypothetical protein MAV_1239 [Mycobacterium avium 104] gi|118166730|gb|ABK67627.1| conserved hypothetical protein [Mycobacterium avium 104] Length=68 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 50/62 (81%), Positives = 55/62 (89%), Gaps = 0/62 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTTVT+DDALLA+AAELTGV E LLR+GLQTLVRVESARRLAALGGTD +A+ PRR Sbjct 1 MRTTVTIDDALLAEAAELTGVTESVALLRQGLQTLVRVESARRLAALGGTDRKASVGPRR 60 Query 61 RT 62 RT Sbjct 61 RT 62 >gi|254819698|ref|ZP_05224699.1| hypothetical protein MintA_07234 [Mycobacterium intracellulare ATCC 13950] Length=78 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 47/57 (83%), Positives = 54/57 (95%), Gaps = 0/57 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAA 57 MRTTVT+DDALLA+AAELTGV E + LLR+GLQTL+RVESARRLAALGGTDP+A+AA Sbjct 11 MRTTVTIDDALLAQAAELTGVTESAALLRQGLQTLIRVESARRLAALGGTDPKASAA 67 >gi|336458729|gb|EGO37689.1| hypothetical protein (DUF2191) [Mycobacterium avium subsp. paratuberculosis S397] Length=68 Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 49/61 (81%), Positives = 54/61 (89%), Gaps = 0/61 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTTVT+DDALLA+AAELTGV E LLR+GLQTLVRVESARRLAALGGTD +A+ PRR Sbjct 1 MRTTVTIDDALLAEAAELTGVTESVALLRQGLQTLVRVESARRLAALGGTDRKASVGPRR 60 Query 61 R 61 R Sbjct 61 R 61 >gi|84494707|ref|ZP_00993826.1| hypothetical protein JNB_07914 [Janibacter sp. HTCC2649] gi|84384200|gb|EAQ00080.1| hypothetical protein JNB_07914 [Janibacter sp. HTCC2649] Length=65 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 46/62 (75%), Positives = 53/62 (86%), Gaps = 0/62 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTTVT+DDAL +AAELTG+ EKS LLR+GL+TL+RVESARRLAALGGTD A A RR Sbjct 1 MRTTVTIDDALYERAAELTGISEKSVLLRDGLETLIRVESARRLAALGGTDRAAKAPTRR 60 Query 61 RT 62 R+ Sbjct 61 RS 62 >gi|325067824|ref|ZP_08126497.1| antitoxin [Actinomyces oris K20] gi|326772426|ref|ZP_08231710.1| toxin-antitoxin system, antitoxin component, ribbon-helix-helix fold protein [Actinomyces viscosus C505] gi|326637058|gb|EGE37960.1| toxin-antitoxin system, antitoxin component, ribbon-helix-helix fold protein [Actinomyces viscosus C505] Length=65 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 44/65 (68%), Positives = 55/65 (85%), Gaps = 0/65 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTTVT+ D L+A A ELTG+ E++ LLR GL+TLVRVESARRLAALGG+D A+AAPRR Sbjct 1 MRTTVTLSDDLIANAQELTGITERTELLRAGLETLVRVESARRLAALGGSDRTASAAPRR 60 Query 61 RTSPR 65 R++ + Sbjct 61 RSASQ 65 >gi|343522886|ref|ZP_08759852.1| hypothetical protein HMPREF9058_1380 [Actinomyces sp. oral taxon 175 str. F0384] gi|343402295|gb|EGV14801.1| hypothetical protein HMPREF9058_1380 [Actinomyces sp. oral taxon 175 str. F0384] Length=84 Score = 84.3 bits (207), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 43/65 (67%), Positives = 55/65 (85%), Gaps = 0/65 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 +RTTVT+ D L+A A ELTG+ E++ LLR GL+TLVRVESARRLAALGG+D A+AAPRR Sbjct 20 VRTTVTLSDDLIANAQELTGITERTELLRAGLETLVRVESARRLAALGGSDRTASAAPRR 79 Query 61 RTSPR 65 R++ + Sbjct 80 RSASQ 84 >gi|311111851|ref|YP_003983073.1| hypothetical protein HMPREF0733_10181 [Rothia dentocariosa ATCC 17931] gi|310943345|gb|ADP39639.1| conserved hypothetical protein [Rothia dentocariosa ATCC 17931] Length=65 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 37/62 (60%), Positives = 52/62 (84%), Gaps = 0/62 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MR TVT+D+ ++AK A+LTG++E+S L+RE ++TL+R+E+ R LAALGG+DPQA AAPR Sbjct 1 MRITVTLDEKVVAKVAKLTGIEERSVLVREAMETLLRIENGRLLAALGGSDPQAQAAPRH 60 Query 61 RT 62 R Sbjct 61 RN 62 >gi|320094347|ref|ZP_08026135.1| hypothetical protein HMPREF9005_0747 [Actinomyces sp. oral taxon 178 str. F0338] gi|319978735|gb|EFW10290.1| hypothetical protein HMPREF9005_0747 [Actinomyces sp. oral taxon 178 str. F0338] Length=71 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 39/61 (64%), Positives = 51/61 (84%), Gaps = 0/61 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTTVT+DD LL +A ELTG++E+S L+R+ ++ LVR+ES R+LAALGG+DP A AAPR Sbjct 8 MRTTVTLDDDLLVRAQELTGIRERSALIRDAVELLVRIESGRQLAALGGSDPGAEAAPRS 67 Query 61 R 61 R Sbjct 68 R 68 >gi|315606070|ref|ZP_07881101.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315312352|gb|EFU60438.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] Length=64 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 39/61 (64%), Positives = 51/61 (84%), Gaps = 0/61 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTTVT+DD LLA+A ELTG+ E+S L+R+ ++ LVR+E+ R+LAALGG+DP A AAPR Sbjct 1 MRTTVTLDDDLLARAEELTGITERSALIRDAVELLVRIETGRQLAALGGSDPGAEAAPRN 60 Query 61 R 61 R Sbjct 61 R 61 >gi|320532938|ref|ZP_08033699.1| toxin-antitoxin system protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320134847|gb|EFW27034.1| toxin-antitoxin system protein [Actinomyces sp. oral taxon 171 str. F0337] Length=61 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 40/61 (66%), Positives = 52/61 (86%), Gaps = 0/61 (0%) Query 5 VTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRRRTSP 64 +T+ D L+A A ELTG+ E++ LLR GL+TLVRVESARRLAALGG+D +A+AAPRRR++ Sbjct 1 MTLSDELIANAQELTGITERTELLRAGLETLVRVESARRLAALGGSDRKASAAPRRRSAS 60 Query 65 R 65 R Sbjct 61 R 61 >gi|300741952|ref|ZP_07071973.1| toxin-antitoxin system, antitoxin component, ribbon-helix-helix fold protein [Rothia dentocariosa M567] gi|300381137|gb|EFJ77699.1| toxin-antitoxin system, antitoxin component, ribbon-helix-helix fold protein [Rothia dentocariosa M567] Length=63 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/61 (63%), Positives = 52/61 (86%), Gaps = 0/61 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTTVT+D+ ++AKAA+LTG++E S+L+R L+TLVRVE+ R LA LGG++PQA AAPR Sbjct 1 MRTTVTLDEEIVAKAAKLTGIEEHSSLVRAALETLVRVENGRLLATLGGSEPQAQAAPRH 60 Query 61 R 61 + Sbjct 61 Q 61 >gi|325982849|ref|YP_004295251.1| hypothetical protein NAL212_2266 [Nitrosomonas sp. AL212] gi|325532368|gb|ADZ27089.1| Protein of unknown function DUF2191 [Nitrosomonas sp. AL212] Length=64 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 39/63 (62%), Positives = 48/63 (77%), Gaps = 0/63 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTT+ +DD LL KA LT V+EKS L+RE L+ L+ ESARRLA LGG++PQ A PRR Sbjct 1 MRTTIVLDDELLQKAQALTHVQEKSALIREALKALIERESARRLANLGGSEPQLNAIPRR 60 Query 61 RTS 63 +TS Sbjct 61 QTS 63 >gi|329894755|ref|ZP_08270557.1| hypothetical protein IMCC3088_969 [gamma proteobacterium IMCC3088] gi|328922802|gb|EGG30134.1| hypothetical protein IMCC3088_969 [gamma proteobacterium IMCC3088] Length=62 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 38/62 (62%), Positives = 49/62 (80%), Gaps = 0/62 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTTVT+DD L+++A +TGV EK+ L+REGL+ L+ ESARRLA LG TDP+ + PRR Sbjct 1 MRTTVTIDDQLMSEAQRITGVVEKAALVREGLKALIERESARRLAKLGATDPELKSVPRR 60 Query 61 RT 62 RT Sbjct 61 RT 62 >gi|241518440|ref|YP_002979068.1| hypothetical protein Rleg_5720 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862853|gb|ACS60517.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length=66 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 39/62 (63%), Positives = 48/62 (78%), Gaps = 0/62 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MR+T+ +DD LL KA LTG KE + L+R+ L+TLVRVES +RL ALGGT P A AAPRR Sbjct 1 MRSTINLDDTLLDKARSLTGTKETAALIRQALETLVRVESGKRLIALGGTMPDAEAAPRR 60 Query 61 RT 62 R+ Sbjct 61 RS 62 >gi|115359424|ref|YP_776562.1| hypothetical protein Bamb_4678 [Burkholderia ambifaria AMMD] gi|115284712|gb|ABI90228.1| conserved hypothetical protein [Burkholderia ambifaria AMMD] Length=78 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 40/64 (63%), Positives = 50/64 (79%), Gaps = 0/64 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTT+++DDALLAKA +LTGV EKS L+RE L+ L+ ESARRLA LGGT+P + PRR Sbjct 14 MRTTLSLDDALLAKAQQLTGVTEKSALVREALRALIARESARRLARLGGTEPDLESVPRR 73 Query 61 RTSP 64 + P Sbjct 74 PSEP 77 >gi|107025405|ref|YP_622916.1| hypothetical protein Bcen_3047 [Burkholderia cenocepacia AU 1054] gi|116693412|ref|YP_838945.1| hypothetical protein Bcen2424_5319 [Burkholderia cenocepacia HI2424] gi|170700063|ref|ZP_02891086.1| conserved hypothetical protein [Burkholderia ambifaria IOP40-10] 7 more sequence titles Length=65 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 40/64 (63%), Positives = 50/64 (79%), Gaps = 0/64 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTT+++DDALLAKA +LTGV EKS L+RE L+ L+ ESARRLA LGGT+P + PRR Sbjct 1 MRTTLSLDDALLAKAQQLTGVTEKSALVREALRALIARESARRLARLGGTEPDLESVPRR 60 Query 61 RTSP 64 + P Sbjct 61 PSEP 64 >gi|325168548|ref|YP_004280338.1| hypothetical protein AGROH133_14573 [Agrobacterium sp. H13-3] gi|325064271|gb|ADY67960.1| hypothetical protein AGROH133_14573 [Agrobacterium sp. H13-3] Length=66 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/62 (57%), Positives = 49/62 (80%), Gaps = 0/62 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MR+T+ +DD L+ +A LTG KE + L+R+ L+TLVRVES +RL ALGG+ P+A A+PRR Sbjct 1 MRSTINIDDNLMERAKSLTGTKETAALVRQALETLVRVESGKRLIALGGSMPEAEASPRR 60 Query 61 RT 62 R+ Sbjct 61 RS 62 >gi|78061182|ref|YP_371090.1| hypothetical protein Bcep18194_B0330 [Burkholderia sp. 383] gi|77969067|gb|ABB10446.1| hypothetical protein Bcep18194_B0330 [Burkholderia sp. 383] Length=65 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/64 (61%), Positives = 50/64 (79%), Gaps = 0/64 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTT+++DDALLAKA +LTGV EKS L++E L+ L+ ESARRLA LGGT+P + PRR Sbjct 1 MRTTLSLDDALLAKAQQLTGVTEKSALVKEALRALIARESARRLARLGGTEPDLESIPRR 60 Query 61 RTSP 64 + P Sbjct 61 PSDP 64 >gi|220933795|ref|YP_002512694.1| hypothetical protein Tgr7_0611 [Thioalkalivibrio sulfidophilus HL-EbGr7] gi|219995105|gb|ACL71707.1| conserved hypothetical protein [Thioalkalivibrio sulfidophilus HL-EbGr7] Length=65 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 36/64 (57%), Positives = 49/64 (77%), Gaps = 0/64 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTT+ +DD LLA+A +TG+ EK+ L+REGL+ L+ ESARRLA LGG++PQ PRR Sbjct 1 MRTTLNIDDQLLAEAQRITGMTEKAALVREGLRALIERESARRLARLGGSEPQLETVPRR 60 Query 61 RTSP 64 ++ P Sbjct 61 QSDP 64 >gi|148265881|ref|YP_001232587.1| hypothetical protein Gura_3864 [Geobacter uraniireducens Rf4] gi|146399381|gb|ABQ28014.1| hypothetical protein Gura_3864 [Geobacter uraniireducens Rf4] Length=99 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 36/62 (59%), Positives = 48/62 (78%), Gaps = 0/62 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTT+ ++DALL KAA+LTG+ EK++L+R GLQ L+ ES++RLA LGGT+ PRR Sbjct 35 MRTTLNIEDALLEKAAKLTGITEKTSLVRLGLQALIAKESSKRLAGLGGTEKNLKMIPRR 94 Query 61 RT 62 RT Sbjct 95 RT 96 >gi|294012926|ref|YP_003546386.1| hypothetical protein SJA_C1-29400 [Sphingobium japonicum UT26S] gi|292676256|dbj|BAI97774.1| hypothetical protein SJA_C1-29400 [Sphingobium japonicum UT26S] Length=65 Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 37/64 (58%), Positives = 46/64 (72%), Gaps = 0/64 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTTV +DD L+AKA TG+ EKS+L+RE L+ L+ ES+ RL LGGT+P AAPRR Sbjct 1 MRTTVALDDELVAKAQAFTGLTEKSSLVREALKALIERESSARLVRLGGTEPHGEAAPRR 60 Query 61 RTSP 64 R P Sbjct 61 RPDP 64 >gi|222147548|ref|YP_002548505.1| hypothetical protein Avi_0702 [Agrobacterium vitis S4] gi|221734536|gb|ACM35499.1| conserved hypothetical protein [Agrobacterium vitis S4] Length=66 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 35/62 (57%), Positives = 47/62 (76%), Gaps = 0/62 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MR+T+ +DD L+ +A LTG KE + L+R+ L+TLVRVES +RL ALGG+ A AAPRR Sbjct 1 MRSTINLDDNLMERAKSLTGTKETAALVRQALETLVRVESGKRLIALGGSMSDAEAAPRR 60 Query 61 RT 62 R+ Sbjct 61 RS 62 >gi|87125281|ref|ZP_01081127.1| hypothetical protein RS9917_07685 [Synechococcus sp. RS9917] gi|86167050|gb|EAQ68311.1| hypothetical protein RS9917_07685 [Synechococcus sp. RS9917] Length=64 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/63 (59%), Positives = 45/63 (72%), Gaps = 0/63 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTTV +DD LLA+A EL G E++ LL+E LQ LV ESARRLAAL G+ P PRR Sbjct 1 MRTTVNLDDQLLAQAQELCGHLERTHLLKEALQALVERESARRLAALAGSQPDLQPVPRR 60 Query 61 RTS 63 R++ Sbjct 61 RSA 63 >gi|88813562|ref|ZP_01128795.1| hypothetical protein NB231_02995 [Nitrococcus mobilis Nb-231] gi|88789191|gb|EAR20325.1| hypothetical protein NB231_02995 [Nitrococcus mobilis Nb-231] Length=65 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 35/64 (55%), Positives = 48/64 (75%), Gaps = 0/64 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTT+ +DD LL +A +TG+ EK+TL+REGL+ L+ ESARRLA LGG++PQ RR Sbjct 1 MRTTLNIDDQLLDEARRITGITEKATLVREGLRALIERESARRLARLGGSEPQLEPVVRR 60 Query 61 RTSP 64 ++ P Sbjct 61 QSDP 64 >gi|56130786|ref|YP_145689.1| hypothetical protein pMOL30_157 [Ralstonia metallidurans CH34] gi|94152502|ref|YP_581909.1| antitoxin of a toxin/antitoxin system [Cupriavidus metallidurans CH34] gi|56068776|emb|CAI11338.1| hypothetical protein [Cupriavidus metallidurans CH34] gi|93358872|gb|ABF12959.1| antitoxin of a toxin/antitoxin system [Cupriavidus metallidurans CH34] Length=78 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 35/63 (56%), Positives = 48/63 (77%), Gaps = 0/63 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTT+T+DD LLAKA TG++EK+ L+RE L+ L++ E+A+RLA LGG+ P APRR Sbjct 1 MRTTITLDDELLAKARAYTGLEEKTALVREALKALIQREAAKRLANLGGSQPGIEGAPRR 60 Query 61 RTS 63 R+ Sbjct 61 RSD 63 >gi|90426272|ref|YP_534642.1| hypothetical protein RPC_4801 [Rhodopseudomonas palustris BisB18] gi|90108286|gb|ABD90323.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length=70 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 33/61 (55%), Positives = 43/61 (71%), Gaps = 0/61 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTT+ +DD L AKA + GVKEKS ++++ LQ V E+ARRLA +GG+ P A PRR Sbjct 8 MRTTIAIDDELFAKAQQYAGVKEKSAVIKKALQAYVESEAARRLARMGGSAPDLVAPPRR 67 Query 61 R 61 R Sbjct 68 R 68 >gi|87303158|ref|ZP_01085956.1| hypothetical protein WH5701_06626 [Synechococcus sp. WH 5701] gi|87282325|gb|EAQ74285.1| hypothetical protein WH5701_06626 [Synechococcus sp. WH 5701] Length=63 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 32/60 (54%), Positives = 48/60 (80%), Gaps = 0/60 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MR T+ +DD LL++A +L+G+ E++ L+RE L+ LV+ ESARRLAALGG++P+ + PRR Sbjct 1 MRITLNLDDELLSQAQQLSGINERTQLVREALKALVQRESARRLAALGGSEPKLESIPRR 60 >gi|198283414|ref|YP_002219735.1| hypothetical protein Lferr_1290 [Acidithiobacillus ferrooxidans ATCC 53993] gi|198247935|gb|ACH83528.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC 53993] Length=65 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 35/61 (58%), Positives = 45/61 (74%), Gaps = 0/61 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTT+ +DD LLA+A L GV+++ LL+E L+ L+ ESARRLA LGGT+PQ PRR Sbjct 1 MRTTINLDDELLAQAKTLCGVEDRGALLKEALRALIERESARRLARLGGTEPQLQNIPRR 60 Query 61 R 61 R Sbjct 61 R 61 >gi|218667623|ref|YP_002426006.1| hypothetical protein AFE_1579 [Acidithiobacillus ferrooxidans ATCC 23270] gi|218519836|gb|ACK80422.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC 23270] Length=65 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 35/61 (58%), Positives = 45/61 (74%), Gaps = 0/61 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTT+ +DD LLA+A L GV+++ LL+E L+ L+ ESARRLA LGGT+PQ PRR Sbjct 1 MRTTINLDDELLAQAKTLCGVEDRGALLKEALRALIERESARRLARLGGTEPQLQNTPRR 60 Query 61 R 61 R Sbjct 61 R 61 >gi|339328580|ref|YP_004688272.1| antitoxin of a toxin/antitoxin system [Cupriavidus necator N-1] gi|338171181|gb|AEI82234.1| antitoxin of a toxin/antitoxin system [Cupriavidus necator N-1] Length=65 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 34/61 (56%), Positives = 46/61 (76%), Gaps = 0/61 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTT+ +DD L+AKA TG+KEK+ L+RE L+ L++ E+A+RLA LGG+ P APRR Sbjct 1 MRTTIALDDDLIAKAQAYTGLKEKTALVREALKALIQREAAKRLANLGGSQPGIKGAPRR 60 Query 61 R 61 R Sbjct 61 R 61 >gi|18121448|gb|AAK52344.1| unknown [Burkholderia sacchari] Length=65 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 34/63 (54%), Positives = 47/63 (75%), Gaps = 0/63 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTT+ +DD L+AKA TG++EK+ ++RE L+ L++ E+ARRLA LGG+ P A PRR Sbjct 1 MRTTIVLDDDLIAKAQAYTGLEEKTAIVREALKALIQREAARRLANLGGSQPGIVAPPRR 60 Query 61 RTS 63 RT Sbjct 61 RTD 63 >gi|241763423|ref|ZP_04761477.1| conserved hypothetical protein [Acidovorax delafieldii 2AN] gi|241367365|gb|EER61686.1| conserved hypothetical protein [Acidovorax delafieldii 2AN] Length=65 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 35/61 (58%), Positives = 47/61 (78%), Gaps = 0/61 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTT+T+DD LLA+A +++G+ E++ L+RE L LV+ ESARRLA LGGT+PQ PR Sbjct 1 MRTTLTLDDELLAQAQQISGLTERTQLIREALLALVQRESARRLARLGGTEPQLQPIPRH 60 Query 61 R 61 R Sbjct 61 R 61 >gi|198282374|ref|YP_002218695.1| hypothetical protein Lferr_0230 [Acidithiobacillus ferrooxidans ATCC 53993] gi|198246895|gb|ACH82488.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC 53993] Length=65 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/61 (58%), Positives = 45/61 (74%), Gaps = 0/61 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTT+ +DD LLA+A L GV+++ LL+E L+ L+ ESARRLA LGGT+PQ PRR Sbjct 1 MRTTINLDDELLAQARTLCGVEDRGALLKEALRALIERESARRLARLGGTEPQLQNIPRR 60 Query 61 R 61 R Sbjct 61 R 61 >gi|154247847|ref|YP_001418805.1| hypothetical protein Xaut_3924 [Xanthobacter autotrophicus Py2] gi|154161932|gb|ABS69148.1| conserved hypothetical protein [Xanthobacter autotrophicus Py2] Length=65 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/62 (60%), Positives = 46/62 (75%), Gaps = 0/62 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTT+ +DD LLAKA LTG+ EKS L+RE L+ L+ ESARRLA LGG++PQ RR Sbjct 1 MRTTLAIDDDLLAKAQALTGLTEKSALVREALKALIARESARRLARLGGSEPQLEPVRRR 60 Query 61 RT 62 R+ Sbjct 61 RS 62 >gi|339482362|ref|YP_004694148.1| hypothetical protein Nit79A3_0876 [Nitrosomonas sp. Is79A3] gi|338804507|gb|AEJ00749.1| Protein of unknown function DUF2191 [Nitrosomonas sp. Is79A3] Length=64 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/61 (55%), Positives = 46/61 (76%), Gaps = 0/61 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTT+ +DD LL KA LT V++KS L++E L+ L+ ESA+RLA+LGG++PQ A P R Sbjct 1 MRTTIVLDDELLEKAQALTHVQKKSALVKEALKALIERESAKRLASLGGSEPQLDAIPHR 60 Query 61 R 61 + Sbjct 61 Q 61 >gi|124516227|gb|EAY57735.1| conserved hypothetical protein [Leptospirillum rubarum] Length=65 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/62 (52%), Positives = 47/62 (76%), Gaps = 0/62 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTTV +DD+LL++A +TG+ ++ LL+E L+ L++ ESARRLA LGG++PQ PRR Sbjct 1 MRTTVRIDDSLLSRAQNMTGLTSRNALLKEALEALIQRESARRLARLGGSEPQLRDIPRR 60 Query 61 RT 62 + Sbjct 61 KN 62 >gi|56130648|ref|YP_145551.1| hypothetical protein pMOL30_021 [Ralstonia metallidurans CH34] gi|94152435|ref|YP_581842.1| antitoxin of a toxin/antitoxin system [Cupriavidus metallidurans CH34] gi|56068639|emb|CAI11203.1| hypothetical protein [Cupriavidus metallidurans CH34] gi|93358805|gb|ABF12892.1| antitoxin of a toxin/antitoxin system [Cupriavidus metallidurans CH34] Length=65 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 33/61 (55%), Positives = 45/61 (74%), Gaps = 0/61 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTT+ +DD LLAKA TG++EK+ L+RE L+ L++ E+A+RLA LGG+ P PRR Sbjct 1 MRTTIALDDELLAKAQAYTGLEEKTALVREALKALIQREAAKRLANLGGSQPGIEGVPRR 60 Query 61 R 61 R Sbjct 61 R 61 >gi|226946669|ref|YP_002801742.1| hypothetical protein Avin_46620 [Azotobacter vinelandii DJ] gi|226721596|gb|ACO80767.1| Conserved hypothetical protein [Azotobacter vinelandii DJ] Length=68 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/62 (57%), Positives = 44/62 (71%), Gaps = 1/62 (1%) Query 1 MRTTVTVDDALLAKAAELTGV-KEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPR 59 MRTTVT+DDAL KA E+ +K+ + RE ++T VRV++ARRLAALGGT P PR Sbjct 1 MRTTVTIDDALYEKALEMADPGMDKADIFREAMKTFVRVQAARRLAALGGTTPNVRNVPR 60 Query 60 RR 61 RR Sbjct 61 RR 62 >gi|254417870|ref|ZP_05031594.1| hypothetical protein BBAL3_180 [Brevundimonas sp. BAL3] gi|196184047|gb|EDX79023.1| hypothetical protein BBAL3_180 [Brevundimonas sp. BAL3] Length=67 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 39/61 (64%), Positives = 50/61 (82%), Gaps = 0/61 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTTVT+DD L+ AAE +G+ E+S ++RE L+ V E+ARRLAA+GGTDP+ATAAPRR Sbjct 1 MRTTVTLDDELMEMAAEYSGLSERSAIIREALKAFVAREAARRLAAMGGTDPKATAAPRR 60 Query 61 R 61 R Sbjct 61 R 61 >gi|116695149|ref|YP_840725.1| hypothetical protein H16_B1205 [Ralstonia eutropha H16] gi|113529648|emb|CAJ95995.1| conserved hypothetical protein [Ralstonia eutropha H16] Length=68 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 35/65 (54%), Positives = 44/65 (68%), Gaps = 1/65 (1%) Query 1 MRTTVTVDDALLAKAAELTGV-KEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPR 59 MRTTVT+DDAL +A E+ +KS L RE ++T VRV++A+RLAALGGT P PR Sbjct 1 MRTTVTIDDALYEQALEIADPGMDKSDLFREAIKTFVRVQAAKRLAALGGTAPDMEDVPR 60 Query 60 RRTSP 64 R P Sbjct 61 SRMEP 65 >gi|258592600|emb|CBE68909.1| conserved protein of unknown function [NC10 bacterium 'Dutch sediment'] Length=66 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 36/63 (58%), Positives = 47/63 (75%), Gaps = 0/63 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTT+ +DD LL +AA LTGV EK++L+R GL+ LV ESARRLA L GT+ + PRR Sbjct 1 MRTTLNIDDTLLRRAAALTGVDEKTSLVRLGLEALVAKESARRLANLAGTEKRLLPIPRR 60 Query 61 RTS 63 R++ Sbjct 61 RSA 63 >gi|158520427|ref|YP_001528297.1| hypothetical protein Dole_0410 [Desulfococcus oleovorans Hxd3] gi|158509253|gb|ABW66220.1| conserved hypothetical protein [Desulfococcus oleovorans Hxd3] Length=63 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 31/61 (51%), Positives = 46/61 (76%), Gaps = 0/61 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTT+ ++D L+ KA+++TG+KEK+ L++ GL+ L+ ES +RLA LGGT Q A PRR Sbjct 1 MRTTLNIEDGLIDKASKMTGIKEKTALVKLGLEALIARESGKRLARLGGTQKQLEAVPRR 60 Query 61 R 61 + Sbjct 61 K 61 >gi|253990251|ref|YP_003041607.1| hypothetical protein PAU_02774 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781701|emb|CAQ84864.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length=67 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 32/65 (50%), Positives = 46/65 (71%), Gaps = 1/65 (1%) Query 1 MRTTVTVDDALLAKAAELTGVK-EKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPR 59 MRTTVT+DD L A+A E+ +K+ + RE ++T V+V++A+RLA+LGGT P+ PR Sbjct 1 MRTTVTIDDVLYAQALEMADPSMDKADIFREAVKTFVQVQAAKRLASLGGTSPEMQTIPR 60 Query 60 RRTSP 64 RR P Sbjct 61 RREEP 65 >gi|37526271|ref|NP_929615.1| hypothetical protein plu2369 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785701|emb|CAE14662.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length=67 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/65 (51%), Positives = 45/65 (70%), Gaps = 1/65 (1%) Query 1 MRTTVTVDDALLAKAAELTGV-KEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPR 59 MRTTVT+DDAL A+A E+ +K+ + RE ++T VRV++A+RLA+LG T P PR Sbjct 1 MRTTVTIDDALYAQALEMADPGMDKADIFREAVKTFVRVQAAKRLASLGSTSPDMQIVPR 60 Query 60 RRTSP 64 RR P Sbjct 61 RREEP 65 >gi|56476545|ref|YP_158134.1| hypothetical protein ebB60 [Aromatoleum aromaticum EbN1] gi|56312588|emb|CAI07233.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length=67 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/65 (53%), Positives = 45/65 (70%), Gaps = 1/65 (1%) Query 1 MRTTVTVDDALLAKAAELTG-VKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPR 59 MRTTVT+DD L KA E+ +++ L RE ++T VRV++A+RLAALGGT P+ PR Sbjct 1 MRTTVTIDDDLYEKALEVADPAMDRADLFREAMKTFVRVQAAKRLAALGGTMPEMQDVPR 60 Query 60 RRTSP 64 RR P Sbjct 61 RRGEP 65 >gi|222056351|ref|YP_002538713.1| hypothetical protein Geob_3269 [Geobacter sp. FRC-32] gi|221565640|gb|ACM21612.1| conserved hypothetical protein [Geobacter sp. FRC-32] Length=70 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/65 (51%), Positives = 46/65 (71%), Gaps = 0/65 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTT+ ++DALL KA +LTG+ EK++L++ GLQ L+ ESARRLA L G++ PRR Sbjct 1 MRTTLNIEDALLEKAVKLTGITEKTSLVKLGLQALIAKESARRLAGLAGSEKGLKMPPRR 60 Query 61 RTSPR 65 R + Sbjct 61 RVKAK 65 >gi|56130745|ref|YP_145648.1| hypothetical protein pMOL30_117 [Ralstonia metallidurans CH34] gi|94152561|ref|YP_581968.1| antitoxin of a toxin/antitoxin system [Cupriavidus metallidurans CH34] gi|56068735|emb|CAI11297.1| hypothetical protein [Cupriavidus metallidurans CH34] gi|93358931|gb|ABF13018.1| antitoxin of a toxin/antitoxin system [Cupriavidus metallidurans CH34] Length=65 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/61 (53%), Positives = 44/61 (73%), Gaps = 0/61 (0%) Query 1 MRTTVTVDDALLAKAAELTGVKEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPRR 60 MRTT+ +DD LLAKA TG+ EK+ ++RE L+ L++ E+A+RLA LGG+ P A RR Sbjct 1 MRTTIALDDELLAKAQAYTGLSEKTAIVREALKALIQREAAKRLANLGGSQPGIQGAARR 60 Query 61 R 61 R Sbjct 61 R 61 >gi|170695112|ref|ZP_02886260.1| conserved hypothetical protein [Burkholderia graminis C4D1M] gi|170139964|gb|EDT08144.1| conserved hypothetical protein [Burkholderia graminis C4D1M] Length=68 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/62 (57%), Positives = 44/62 (71%), Gaps = 1/62 (1%) Query 1 MRTTVTVDDALLAKAAELTGV-KEKSTLLREGLQTLVRVESARRLAALGGTDPQATAAPR 59 MRTTVT+DDAL +A EL +K+ L R +QT VRV++A+RLAALGGT P + PR Sbjct 1 MRTTVTIDDALYQEALELADPGTDKAGLFRSAMQTFVRVQAAKRLAALGGTVPDISDIPR 60 Query 60 RR 61 RR Sbjct 61 RR 62 Lambda K H 0.314 0.126 0.328 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 130377649416 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40