BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1128c Length=451 Score E Sequences producing significant alignments: (Bits) Value gi|15608268|ref|NP_215644.1| hypothetical protein Rv1128c [Mycob... 920 0.0 gi|31792322|ref|NP_854815.1| hypothetical protein Mb1159c [Mycob... 918 0.0 gi|340626141|ref|YP_004744593.1| hypothetical protein MCAN_11371... 911 0.0 gi|289749664|ref|ZP_06509042.1| conserved hypothetical protein [... 855 0.0 gi|15840566|ref|NP_335603.1| hypothetical protein MT1160 [Mycoba... 850 0.0 gi|289442558|ref|ZP_06432302.1| LOW QUALITY PROTEIN: conserved h... 744 0.0 gi|183981538|ref|YP_001849829.1| hypothetical protein MMAR_1523 ... 614 9e-174 gi|342859854|ref|ZP_08716507.1| hypothetical protein MCOL_13283 ... 612 3e-173 gi|289744872|ref|ZP_06504250.1| conserved hypothetical protein [... 608 4e-172 gi|340625131|ref|YP_004743583.1| hypothetical protein MCAN_00981... 592 3e-167 gi|296165225|ref|ZP_06847772.1| REP13E12 repeat protein [Mycobac... 589 3e-166 gi|240170495|ref|ZP_04749154.1| hypothetical protein MkanA1_1437... 588 6e-166 gi|118464603|ref|YP_881555.1| hypothetical protein MAV_2352 [Myc... 587 1e-165 gi|183983120|ref|YP_001851411.1| hypothetical protein MMAR_3121 ... 586 3e-165 gi|118617874|ref|YP_906206.1| hypothetical protein MUL_2371 [Myc... 585 8e-165 gi|340628437|ref|YP_004746889.1| hypothetical protein MCAN_34831... 583 2e-164 gi|41409558|ref|NP_962394.1| hypothetical protein MAP3460c [Myco... 577 2e-162 gi|296164917|ref|ZP_06847473.1| REP13E12 repeat protein [Mycobac... 575 5e-162 gi|41407982|ref|NP_960818.1| hypothetical protein MAP1884c [Myco... 569 3e-160 gi|15608840|ref|NP_216218.1| hypothetical protein Rv1702c [Mycob... 568 5e-160 gi|342861726|ref|ZP_08718372.1| hypothetical protein MCOL_22671 ... 568 8e-160 gi|254775286|ref|ZP_05216802.1| hypothetical protein MaviaA2_115... 567 1e-159 gi|289569750|ref|ZP_06449977.1| conserved hypothetical protein [... 565 5e-159 gi|118463168|ref|YP_881993.1| hypothetical protein MAV_2806 [Myc... 564 1e-158 gi|340628249|ref|YP_004746701.1| hypothetical protein MCAN_32901... 563 2e-158 gi|41408593|ref|NP_961429.1| hypothetical protein MAP2495 [Mycob... 562 4e-158 gi|240172437|ref|ZP_04751096.1| hypothetical protein MkanA1_2419... 562 5e-158 gi|254818822|ref|ZP_05223823.1| hypothetical protein MintA_02799... 550 2e-154 gi|342861564|ref|ZP_08718211.1| hypothetical protein MCOL_21866 ... 546 4e-153 gi|254550150|ref|ZP_05140597.1| hypothetical protein Mtube_06779... 545 4e-153 gi|253799808|ref|YP_003032809.1| hypothetical protein TBMG_02833... 545 5e-153 gi|15608288|ref|NP_215664.1| hypothetical protein Rv1148c [Mycob... 545 5e-153 gi|167969181|ref|ZP_02551458.1| hypothetical protein MtubH3_1459... 545 6e-153 gi|167969293|ref|ZP_02551570.1| hypothetical protein MtubH3_1520... 545 7e-153 gi|289761293|ref|ZP_06520671.1| conserved hypothetical protein [... 545 8e-153 gi|15840590|ref|NP_335627.1| hypothetical protein MT1183 [Mycoba... 544 9e-153 gi|342861356|ref|ZP_08718004.1| hypothetical protein MCOL_20831 ... 544 2e-152 gi|121637850|ref|YP_978073.1| hypothetical protein BCG_1984 [Myc... 543 2e-152 gi|148822364|ref|YP_001287118.1| hypothetical protein TBFG_11173... 543 2e-152 gi|41407563|ref|NP_960399.1| hypothetical protein MAP1465c [Myco... 543 3e-152 gi|121637080|ref|YP_977303.1| hypothetical protein BCG_1209c [My... 543 3e-152 gi|240171017|ref|ZP_04749676.1| hypothetical protein MkanA1_1702... 542 4e-152 gi|339631213|ref|YP_004722855.1| hypothetical protein MAF_11650 ... 542 4e-152 gi|289573806|ref|ZP_06454033.1| conserved hypothetical protein [... 540 2e-151 gi|41407717|ref|NP_960553.1| hypothetical protein MAP1619 [Mycob... 538 7e-151 gi|342861192|ref|ZP_08717841.1| hypothetical protein MCOL_20012 ... 538 8e-151 gi|118466658|ref|YP_882229.1| hypothetical protein MAV_3043 [Myc... 537 1e-150 gi|118464750|ref|YP_883326.1| hypothetical protein MAV_4180 [Myc... 536 2e-150 gi|118465560|ref|YP_882185.1| hypothetical protein MAV_2999 [Myc... 534 1e-149 gi|118464547|ref|YP_880668.1| hypothetical protein MAV_1426 [Myc... 534 2e-149 >gi|15608268|ref|NP_215644.1| hypothetical protein Rv1128c [Mycobacterium tuberculosis H37Rv] gi|148660914|ref|YP_001282437.1| hypothetical protein MRA_1137 [Mycobacterium tuberculosis H37Ra] gi|148822342|ref|YP_001287096.1| hypothetical protein TBFG_11151 [Mycobacterium tuberculosis F11] 41 more sequence titles Length=451 Score = 920 bits (2379), Expect = 0.0, Method: Compositional matrix adjust. Identities = 451/451 (100%), Positives = 451/451 (100%), Gaps = 0/451 (0%) Query 1 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI 60 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI Sbjct 1 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI 60 Query 61 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ 120 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ Sbjct 61 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ 120 Query 121 RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN 180 RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN Sbjct 121 RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN 180 Query 181 PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA 240 PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA Sbjct 181 PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA 240 Query 241 PCVNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLE 300 PCVNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLE Sbjct 241 PCVNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLE 300 Query 301 AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKD 360 AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKD Sbjct 301 AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKD 360 Query 361 SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTE 420 SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTE Sbjct 361 SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTE 420 Query 421 WLPPPHLDHGQPRVNTFHHPEKLLADDEGDP 451 WLPPPHLDHGQPRVNTFHHPEKLLADDEGDP Sbjct 421 WLPPPHLDHGQPRVNTFHHPEKLLADDEGDP 451 >gi|31792322|ref|NP_854815.1| hypothetical protein Mb1159c [Mycobacterium bovis AF2122/97] gi|121637060|ref|YP_977283.1| hypothetical protein BCG_1189c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989533|ref|YP_002644220.1| hypothetical protein JTY_1162 [Mycobacterium bovis BCG str. Tokyo 172] 20 more sequence titles Length=451 Score = 918 bits (2372), Expect = 0.0, Method: Compositional matrix adjust. Identities = 450/451 (99%), Positives = 450/451 (99%), Gaps = 0/451 (0%) Query 1 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI 60 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI Sbjct 1 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI 60 Query 61 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ 120 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ Sbjct 61 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ 120 Query 121 RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN 180 RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN Sbjct 121 RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN 180 Query 181 PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA 240 PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA Sbjct 181 PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA 240 Query 241 PCVNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLE 300 PCVNGAPSKEQARRDTRSCPQRNHDALNA LRSLLTSGNLGQHNGLPASIIVTTTLKDLE Sbjct 241 PCVNGAPSKEQARRDTRSCPQRNHDALNAGLRSLLTSGNLGQHNGLPASIIVTTTLKDLE 300 Query 301 AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKD 360 AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKD Sbjct 301 AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKD 360 Query 361 SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTE 420 SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTE Sbjct 361 SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTE 420 Query 421 WLPPPHLDHGQPRVNTFHHPEKLLADDEGDP 451 WLPPPHLDHGQPRVNTFHHPEKLLADDEGDP Sbjct 421 WLPPPHLDHGQPRVNTFHHPEKLLADDEGDP 451 >gi|340626141|ref|YP_004744593.1| hypothetical protein MCAN_11371 [Mycobacterium canettii CIPT 140010059] gi|340004331|emb|CCC43473.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=451 Score = 911 bits (2354), Expect = 0.0, Method: Compositional matrix adjust. Identities = 447/451 (99%), Positives = 449/451 (99%), Gaps = 0/451 (0%) Query 1 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI 60 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI Sbjct 1 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI 60 Query 61 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ 120 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ Sbjct 61 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ 120 Query 121 RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN 180 RH LIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN Sbjct 121 RHELIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN 180 Query 181 PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA 240 PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA Sbjct 181 PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA 240 Query 241 PCVNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLE 300 PCV+GAPSKEQARRDTRSCPQRNHDALNA LRSLLTSGNLGQHNGLPASIIVTTTLKDLE Sbjct 241 PCVDGAPSKEQARRDTRSCPQRNHDALNAGLRSLLTSGNLGQHNGLPASIIVTTTLKDLE 300 Query 301 AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKD 360 AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRI+LYAKD Sbjct 301 AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIVLYAKD 360 Query 361 SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTE 420 SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTE Sbjct 361 SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTE 420 Query 421 WLPPPHLDHGQPRVNTFHHPEKLLADDEGDP 451 WLPPPHLDHGQPRVNTFHHPEKLLADDEGDP Sbjct 421 WLPPPHLDHGQPRVNTFHHPEKLLADDEGDP 451 >gi|289749664|ref|ZP_06509042.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289690251|gb|EFD57680.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=451 Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/451 (97%), Positives = 437/451 (97%), Gaps = 0/451 (0%) Query 1 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI 60 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI Sbjct 1 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI 60 Query 61 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ 120 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ Sbjct 61 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ 120 Query 121 RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN 180 RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN Sbjct 121 RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN 180 Query 181 PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA 240 PDGDYTDEDRARRRGL + K YVTPELRATIEAVWAKLAAPGMCNPEQKA Sbjct 181 PDGDYTDEDRARRRGLDVRKARCRWDVAAQRYVTPELRATIEAVWAKLAAPGMCNPEQKA 240 Query 241 PCVNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLE 300 PCVNGAPSKEQARRDTRSCPQRNHDALNA LRSLLTSGNLGQHNGLPASIIVTTTLKDLE Sbjct 241 PCVNGAPSKEQARRDTRSCPQRNHDALNAGLRSLLTSGNLGQHNGLPASIIVTTTLKDLE 300 Query 301 AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKD 360 AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKD Sbjct 301 AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKD 360 Query 361 SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTE 420 SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTE Sbjct 361 SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTE 420 Query 421 WLPPPHLDHGQPRVNTFHHPEKLLADDEGDP 451 WLPPPHLDHGQPRVNTFHHPEKLLADDEGDP Sbjct 421 WLPPPHLDHGQPRVNTFHHPEKLLADDEGDP 451 >gi|15840566|ref|NP_335603.1| hypothetical protein MT1160 [Mycobacterium tuberculosis CDC1551] gi|13880745|gb|AAK45417.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|323720410|gb|EGB29504.1| hypothetical protein TMMG_01820 [Mycobacterium tuberculosis CDC1551A] Length=420 Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust. Identities = 419/420 (99%), Positives = 419/420 (99%), Gaps = 0/420 (0%) Query 1 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI 60 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI Sbjct 1 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI 60 Query 61 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ 120 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ Sbjct 61 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ 120 Query 121 RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN 180 RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN Sbjct 121 RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN 180 Query 181 PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA 240 PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA Sbjct 181 PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA 240 Query 241 PCVNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLE 300 PCVNGAPSKEQARRDTRSCPQRNHDALNA LRSLLTSGNLGQHNGLPASIIVTTTLKDLE Sbjct 241 PCVNGAPSKEQARRDTRSCPQRNHDALNAGLRSLLTSGNLGQHNGLPASIIVTTTLKDLE 300 Query 301 AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKD 360 AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKD Sbjct 301 AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKD 360 Query 361 SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTE 420 SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTE Sbjct 361 SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTE 420 >gi|289442558|ref|ZP_06432302.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289415477|gb|EFD12717.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis T46] Length=419 Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust. Identities = 381/401 (96%), Positives = 382/401 (96%), Gaps = 4/401 (0%) Query 51 SVEHTLINQIGEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLP 110 SVEHTLINQIGE E + L A RSEAKRRVAEAADLGQRRALTGEPLP Sbjct 23 SVEHTLINQIGEHPPRELAASCMTLRRAHH----RSEAKRRVAEAADLGQRRALTGEPLP 78 Query 111 PLLTATAKAQRHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAK 170 PLLTATAKAQRHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAK Sbjct 79 PLLTATAKAQRHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAK 138 Query 171 LAARIMDCLNPDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAA 230 LAARIMDCLNPDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAA Sbjct 139 LAARIMDCLNPDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAA 198 Query 231 PGMCNPEQKAPCVNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASI 290 PGMCNPEQKAPCVNGAPSKEQARRDTRSCPQRNHDALNA LRSLLTSGNLGQHNGLPASI Sbjct 199 PGMCNPEQKAPCVNGAPSKEQARRDTRSCPQRNHDALNAGLRSLLTSGNLGQHNGLPASI 258 Query 291 IVTTTLKDLEAAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASP 350 IVTTTLKDLEAAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASP Sbjct 259 IVTTTLKDLEAAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASP 318 Query 351 AQRIMLYAKDSGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWT 410 AQRIMLYAKDSGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWT Sbjct 319 AQRIMLYAKDSGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWT 378 Query 411 TRKNAHGDTEWLPPPHLDHGQPRVNTFHHPEKLLADDEGDP 451 TRKNAHGDTEWLPPPHLDHGQPRVNTFHHPEKLLADDEGDP Sbjct 379 TRKNAHGDTEWLPPPHLDHGQPRVNTFHHPEKLLADDEGDP 419 >gi|183981538|ref|YP_001849829.1| hypothetical protein MMAR_1523 [Mycobacterium marinum M] gi|183174864|gb|ACC39974.1| conserved hypothetical protein [Mycobacterium marinum M] Length=457 Score = 614 bits (1584), Expect = 9e-174, Method: Compositional matrix adjust. Identities = 299/447 (67%), Positives = 354/447 (80%), Gaps = 0/447 (0%) Query 4 TREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQ 63 +REE+ AF +L ++R+ L FD LTTPERLALL+ CE ARR+LPS+EH LINQ+ EQ Sbjct 5 SREEVVAAFDALDAVMARLQDLCFDGLTTPERLALLQRCEVARRRLPSIEHPLINQLVEQ 64 Query 64 STEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHG 123 + E+ELGGKL LA RLR++R EA RR+ EAADLG RRALTGE L PLL+ATA A R G Sbjct 65 AGEQELGGKLAAVLAGRLRVSRGEASRRLREAADLGPRRALTGEQLAPLLSATASAVRQG 124 Query 124 LIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDG 183 IG GHV VIR F ++P+ VDL+T E+AE LA+ A Q+RPDQLAKLA R+MDC+NPDG Sbjct 125 RIGAGHVRVIREFCGQVPAEVDLETRERAEAHLARLAGQFRPDQLAKLAQRLMDCVNPDG 184 Query 184 DYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCV 243 Y+DEDRARRRGLTLG+Q DGMSR+SG++TPE RA ++AV AKLAAPGMCNP+ ++P V Sbjct 185 RYSDEDRARRRGLTLGRQGRDGMSRISGWLTPEARAGLDAVLAKLAAPGMCNPDDESPVV 244 Query 244 NGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAA 303 + RD RS QR+HD LNA +R+LL SG+LGQHNGLPASIIVTTTL +L+ A Sbjct 245 QAPAGADAVSRDRRSVGQRHHDGLNAAVRALLASGDLGQHNGLPASIIVTTTLGELQRAC 304 Query 304 GAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGC 363 G GLTGGGT+LPISDVIRLARHA+HYLA+FDRGKA+ LYH KRLA+ QR++LYAKD GC Sbjct 305 GRGLTGGGTVLPISDVIRLARHAHHYLAVFDRGKAVGLYHAKRLATAGQRLVLYAKDRGC 364 Query 364 SAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWLP 423 + PGCDVPGY CEVHHV +A TD++ LTL CG H L E+GW TRKNAHGDTEWLP Sbjct 365 TRPGCDVPGYQCEVHHVAAWATSGRTDIDQLTLACGPDHKLLEQGWRTRKNAHGDTEWLP 424 Query 424 PPHLDHGQPRVNTFHHPEKLLADDEGD 450 PPHLDHGQPR NT+HHPEKLL D D Sbjct 425 PPHLDHGQPRTNTYHHPEKLLRDSAAD 451 >gi|342859854|ref|ZP_08716507.1| hypothetical protein MCOL_13283 [Mycobacterium colombiense CECT 3035] gi|342132986|gb|EGT86206.1| hypothetical protein MCOL_13283 [Mycobacterium colombiense CECT 3035] Length=453 Score = 612 bits (1579), Expect = 3e-173, Method: Compositional matrix adjust. Identities = 305/446 (69%), Positives = 350/446 (79%), Gaps = 0/446 (0%) Query 3 STREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGE 62 S REE+ +L +SR ++DALT PERL +LE E R+L + H LINQ+GE Sbjct 4 SDREELQHDVDALRAVVSRFREHSYDALTNPERLQMLEVLECEARKLQAPSHQLINQLGE 63 Query 63 QSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRH 122 Q ELGGKL LADRL I+R+EA RR+AEAADLG RRALTGEPLPP+L ATA AQR Sbjct 64 QGDSTELGGKLSWVLADRLHISRAEAGRRIAEAADLGPRRALTGEPLPPVLPATAAAQRD 123 Query 123 GLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPD 182 G IG HV VIR F H+LP VDL+T AE+ LA +AT++RPDQLAKLA R+MDCLNPD Sbjct 124 GAIGADHVAVIRRFFHQLPESVDLETCVHAEKHLAAKATEFRPDQLAKLARRLMDCLNPD 183 Query 183 GDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPC 242 G YTDEDRAR RGL LG Q DGMSRLSG++TPE RA+ EAV AKLAAPGMCNP+ P Sbjct 184 GSYTDEDRARMRGLVLGNQQADGMSRLSGWLTPEARASWEAVLAKLAAPGMCNPDDDTPA 243 Query 243 VNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAA 302 V+GAPS+E +RDTR+ QRNHD L+A LR++L SG+LGQHNGLPASI+VTTTL +LEAA Sbjct 244 VDGAPSEEAVQRDTRTPGQRNHDGLSAALRAMLASGDLGQHNGLPASIVVTTTLTELEAA 303 Query 303 AGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSG 362 AG GLTGGGTILP+SDVIRLARHA+HYLAIFD+GKALALYHT+RLASP QRI+LYAKD G Sbjct 304 AGKGLTGGGTILPMSDVIRLARHAHHYLAIFDKGKALALYHTRRLASPGQRIVLYAKDRG 363 Query 363 CSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWL 422 CS PGCD GYYCEVHHV +A+ TDV+ LTL CG HH L E+GW TRK A+GDTEW+ Sbjct 364 CSHPGCDASGYYCEVHHVEDWARTHRTDVDQLTLACGPHHRLLEKGWATRKRANGDTEWI 423 Query 423 PPPHLDHGQPRVNTFHHPEKLLADDE 448 PPPHLD GQPR NTFHHPE LL E Sbjct 424 PPPHLDRGQPRTNTFHHPEDLLCGHE 449 >gi|289744872|ref|ZP_06504250.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289757218|ref|ZP_06516596.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289685400|gb|EFD52888.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289712782|gb|EFD76794.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|339294120|gb|AEJ46231.1| hypothetical protein CCDC5079_1041 [Mycobacterium tuberculosis CCDC5079] gi|339297760|gb|AEJ49870.1| hypothetical protein CCDC5180_1033 [Mycobacterium tuberculosis CCDC5180] Length=318 Score = 608 bits (1569), Expect = 4e-172, Method: Compositional matrix adjust. Identities = 306/310 (99%), Positives = 306/310 (99%), Gaps = 0/310 (0%) Query 1 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI 60 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI Sbjct 1 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI 60 Query 61 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ 120 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ Sbjct 61 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ 120 Query 121 RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN 180 RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN Sbjct 121 RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN 180 Query 181 PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA 240 PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA Sbjct 181 PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA 240 Query 241 PCVNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLE 300 PCVNGAPSKEQARRDTRSCPQRNHDALNA LRSLLTSGNLGQHNGLPASIIVTTTLKDLE Sbjct 241 PCVNGAPSKEQARRDTRSCPQRNHDALNAGLRSLLTSGNLGQHNGLPASIIVTTTLKDLE 300 Query 301 AAAGAGLTGG 310 AAAGAG G Sbjct 301 AAAGAGSPAG 310 >gi|340625131|ref|YP_004743583.1| hypothetical protein MCAN_00981 [Mycobacterium canettii CIPT 140010059] gi|340003321|emb|CCC42439.1| putative uncharacterized protein [Mycobacterium canettii CIPT 140010059] Length=492 Score = 592 bits (1527), Expect = 3e-167, Method: Compositional matrix adjust. Identities = 289/451 (65%), Positives = 345/451 (77%), Gaps = 0/451 (0%) Query 1 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI 60 + ++REE+ E F +L L R+ ++F+ LTTPERLA+LE E R+LP+V H LINQ+ Sbjct 41 LANSREELVEVFDALDAELDRLDEVSFEVLTTPERLAMLERLERLARRLPAVGHALINQL 100 Query 61 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ 120 Q+ EEELG L LA+RLRIT+ +A RR+AEAADLG RRALTGEPL P LTATA AQ Sbjct 101 DAQAGEEELGATLCCALANRLRITKPDAARRIAEAADLGPRRALTGEPLAPQLTATATAQ 160 Query 121 RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN 180 R GLIG+ H++VIRAF LP+ VD+ T E AE DLA +A YRPD+LAK A R+MD L+ Sbjct 161 RQGLIGEAHIKVIRAFFAHLPAEVDVSTREAAEADLAGKARGYRPDELAKYAQRVMDWLH 220 Query 181 PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA 240 PDGD+TD +RAR+RG+TLG Q+ DGMSRLSGY+TPE RAT EAV AKLAAPGMCNP+ Sbjct 221 PDGDFTDTERARKRGITLGNQEYDGMSRLSGYLTPEARATFEAVLAKLAAPGMCNPDDHT 280 Query 241 PCVNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLE 300 P ++ P RDTRS QRNHD L A LR+L+ SG LGQHNGLP SI+VTTTL DL+ Sbjct 281 PVIDTTPDAAAIDRDTRSQAQRNHDGLLAGLRALIASGKLGQHNGLPVSIVVTTTLTDLQ 340 Query 301 AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKD 360 AAG G TGGG++LP++DVIR+A HA+HYLAIFD G LALYHTKRLASPAQRIML+A+D Sbjct 341 NAAGKGFTGGGSLLPMADVIRMASHAHHYLAIFDHGTPLALYHTKRLASPAQRIMLFARD 400 Query 361 SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTE 420 GC+ PGCD P Y+ + HHV +A R TD+ DLTL CG + LAE+GW TRKN GDTE Sbjct 401 RGCTKPGCDAPAYHSQAHHVQGWASTRRTDITDLTLACGPDNRLAEKGWITRKNTKGDTE 460 Query 421 WLPPPHLDHGQPRVNTFHHPEKLLADDEGDP 451 WLPP HLDHGQPR NTFHHPEKLL DD+ P Sbjct 461 WLPPAHLDHGQPRTNTFHHPEKLLRDDDDKP 491 >gi|296165225|ref|ZP_06847772.1| REP13E12 repeat protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899414|gb|EFG78873.1| REP13E12 repeat protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=458 Score = 589 bits (1519), Expect = 3e-166, Method: Compositional matrix adjust. Identities = 300/445 (68%), Positives = 346/445 (78%), Gaps = 0/445 (0%) Query 3 STREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGE 62 + RE+I +L A +R+ G ++ ALTTPERL +LE E R+L + H LINQ+GE Sbjct 4 TDREQIAADVEALCAAAARLQGHSYAALTTPERLGILETLEGVTRKLQAPSHELINQLGE 63 Query 63 QSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRH 122 Q+ ELGG+L LADRL I+R EA RRVAEAA+LG RRAL+GEPL P+L ATA AQR Sbjct 64 QADSAELGGRLSWALADRLHISRGEASRRVAEAAELGPRRALSGEPLAPVLAATAAAQRA 123 Query 123 GLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPD 182 G IG HV VIR RLP VDL T E AER LA +A YRPDQLA LA +MDCLNPD Sbjct 124 GAIGAEHVAVIRRLFRRLPESVDLDTREHAERHLAAEARHYRPDQLATLARHLMDCLNPD 183 Query 183 GDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPC 242 G YTD DRAR RGL LG Q DGMS+LSG++TPE RAT EAV AKLAAPGMCNP+ +AP Sbjct 184 GHYTDADRARARGLVLGNQQADGMSKLSGWLTPEARATWEAVLAKLAAPGMCNPDDEAPV 243 Query 243 VNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAA 302 +GAPS+E +RDTRS QRNHD LNA LR +L SG LGQHNGLPA+I+VTTTLK+LEAA Sbjct 244 SDGAPSEEAVQRDTRSPAQRNHDGLNAALRGMLASGELGQHNGLPAAIVVTTTLKELEAA 303 Query 303 AGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSG 362 AG GLTGGGTILP+SDVIRLARHA+HYLAIFD K +ALYHTKRLASP QRI+LYA+D G Sbjct 304 AGRGLTGGGTILPMSDVIRLARHAHHYLAIFDNAKPVALYHTKRLASPGQRIVLYAQDRG 363 Query 363 CSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWL 422 CS PGCDVPGY CEVHHVT +A TD++ LTL CG HH L + GWTTRK A+GDT+W+ Sbjct 364 CSHPGCDVPGYLCEVHHVTDWAHTHRTDIDQLTLACGPHHRLLDNGWTTRKRANGDTDWI 423 Query 423 PPPHLDHGQPRVNTFHHPEKLLADD 447 PPPHLDHGQPR NTFHHPEK+LA++ Sbjct 424 PPPHLDHGQPRTNTFHHPEKILAEN 448 >gi|240170495|ref|ZP_04749154.1| hypothetical protein MkanA1_14375 [Mycobacterium kansasii ATCC 12478] Length=616 Score = 588 bits (1516), Expect = 6e-166, Method: Compositional matrix adjust. Identities = 288/415 (70%), Positives = 340/415 (82%), Gaps = 0/415 (0%) Query 1 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI 60 MCS +E + +F +L A+SR+ L+FDALTTPER+ALLE CE RRQLPS+EH LINQI Sbjct 1 MCSGQESVVASFDALQLAVSRLQELSFDALTTPERMALLERCEIVRRQLPSIEHALINQI 60 Query 61 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ 120 EQS+EE+LGG+L LA RLRITR+EA RRV EAA+LG+RRA+TGEPL P L+ATA AQ Sbjct 61 AEQSSEEQLGGRLPSALASRLRITRAEASRRVGEAAELGERRAMTGEPLAPQLSATAAAQ 120 Query 121 RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN 180 R G +G+ HV VIR FV LP VD++TLEKAE LA+ AT++RPDQLAKLA R+MDCLN Sbjct 121 RAGHLGEAHVRVIRDFVRHLPVEVDIETLEKAEAHLARLATRFRPDQLAKLAQRLMDCLN 180 Query 181 PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA 240 PDG +TDEDRARRRGLTLGKQ +DGMSRL+G++TPE RA ++AV AKLAAPGMCNP+ ++ Sbjct 181 PDGTFTDEDRARRRGLTLGKQGLDGMSRLTGWLTPEARAGLDAVLAKLAAPGMCNPQDES 240 Query 241 PCVNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLE 300 P V+G P ++ A+RDTRS QR HD LNA LR LL SGNLGQHNGLPASIIV+TTLK+LE Sbjct 241 PVVDGPPPQDVAQRDTRSESQRTHDGLNAALRGLLASGNLGQHNGLPASIIVSTTLKELE 300 Query 301 AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKD 360 +A+G LTGGGT+LP+SDVIRL RHANHYLAIFD GKALALYHTKRLASP QRI+LY KD Sbjct 301 SASGKALTGGGTLLPMSDVIRLGRHANHYLAIFDDGKALALYHTKRLASPGQRIVLYTKD 360 Query 361 SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNA 415 GCSAPGCDVPGY CEVHHV +A TD++DLT CG HH L ++GW+ K A Sbjct 361 RGCSAPGCDVPGYRCEVHHVREWASTHRTDIDDLTFACGPHHKLLDKGWSPEKTA 415 >gi|118464603|ref|YP_881555.1| hypothetical protein MAV_2352 [Mycobacterium avium 104] gi|254775024|ref|ZP_05216540.1| hypothetical protein MaviaA2_10169 [Mycobacterium avium subsp. avium ATCC 25291] gi|48928140|gb|AAT47748.1| conserved hypothetical protein [Mycobacterium avium] gi|118165890|gb|ABK66787.1| conserved hypothetical protein [Mycobacterium avium 104] Length=468 Score = 587 bits (1513), Expect = 1e-165, Method: Compositional matrix adjust. Identities = 310/442 (71%), Positives = 354/442 (81%), Gaps = 0/442 (0%) Query 3 STREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGE 62 STREEI +L A+SRVLG ++DALTTPERL LLE + R+L H LINQ+ E Sbjct 4 STREEIRADVDALRAAVSRVLGHSYDALTTPERLRLLEIFDRETRRLRVPGHQLINQLAE 63 Query 63 QSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRH 122 QS ELGG+L LA+RL ITRS+A RR+AEAADLG RRALTGEPLPPLL ATA AQR Sbjct 64 QSDPTELGGRLSFALAERLHITRSDASRRIAEAADLGPRRALTGEPLPPLLPATAAAQRD 123 Query 123 GLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPD 182 G IG HV VIR F +LP VD++T E AER LA QATQ+RPDQL+KLA R+MDCLNPD Sbjct 124 GAIGTDHVAVIRQFFDQLPEAVDVETCEHAERQLAAQATQFRPDQLSKLARRLMDCLNPD 183 Query 183 GDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPC 242 G Y+DEDRAR RGL LG Q DGMSRLSG++TPE RA EAV AKLAAPGMCNP+ AP Sbjct 184 GRYSDEDRARARGLVLGNQQADGMSRLSGWLTPEARAGWEAVLAKLAAPGMCNPDDDAPV 243 Query 243 VNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAA 302 V+G P + ++RD+RS QRNHD LNA LR+LL G LGQHNGLPASIIVTTTL+DLE+A Sbjct 244 VDGPPPEAASQRDSRSAAQRNHDGLNAALRALLAGGKLGQHNGLPASIIVTTTLRDLESA 303 Query 303 AGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSG 362 AG GLTGGGT+LP+S+VIRLARHA+HYLA+FD GK LALYHTKRLASP QRI+LYAKD G Sbjct 304 AGKGLTGGGTLLPMSEVIRLARHAHHYLAVFDNGKPLALYHTKRLASPGQRIVLYAKDRG 363 Query 363 CSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWL 422 CS PGCDV GYYCEVHHVT YA+C TD++ LT CGGHHPLAE+GW TRKN G+TEW+ Sbjct 364 CSHPGCDVSGYYCEVHHVTGYAKCGRTDIDQLTFACGGHHPLAEQGWITRKNGRGETEWI 423 Query 423 PPPHLDHGQPRVNTFHHPEKLL 444 PPPHL+ GQPRVN+FHHPE +L Sbjct 424 PPPHLERGQPRVNSFHHPEDML 445 >gi|183983120|ref|YP_001851411.1| hypothetical protein MMAR_3121 [Mycobacterium marinum M] gi|183176446|gb|ACC41556.1| conserved hypothetical protein [Mycobacterium marinum M] Length=462 Score = 586 bits (1510), Expect = 3e-165, Method: Compositional matrix adjust. Identities = 296/449 (66%), Positives = 357/449 (80%), Gaps = 0/449 (0%) Query 2 CSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIG 61 CS RE + L A+ ++ ++F+ALTTPERL +LE E R+LP ++ L+NQ+ Sbjct 6 CSDRESVVATLDRLDRAVDALVEVSFEALTTPERLRVLERLEVVARRLPVAQYALLNQLD 65 Query 62 EQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQR 121 EQ+ E ELGG+L +A RLRITRSEA RRVAEAAD+G RRAL+G+P+ P+LTATA A R Sbjct 66 EQAGEAELGGRLAAVVASRLRITRSEAGRRVAEAADVGPRRALSGQPVGPVLTATAAALR 125 Query 122 HGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNP 181 G++G+GHV VIR F RLP+ VD+ T ++AE LAK ATQ+RPDQLA+LA R+MDCLNP Sbjct 126 QGVVGEGHVRVIRDFFRRLPAGVDVGTRDRAEAHLAKLATQFRPDQLARLAGRLMDCLNP 185 Query 182 DGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAP 241 DG ++DEDRARRRGL+LG+Q +DGMSR+SG++TPE RA +EAVWAKLAAPGMCNPE +A Sbjct 186 DGRHSDEDRARRRGLSLGRQGLDGMSRISGWLTPEARAGLEAVWAKLAAPGMCNPEDEAA 245 Query 242 CVNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEA 301 V+G S + A RD+RS QR HD NA LR++L SG LGQHNGLPASIIV+TTLK+LEA Sbjct 246 VVDGPVSPDAADRDSRSVGQRQHDGFNAALRAVLASGELGQHNGLPASIIVSTTLKELEA 305 Query 302 AAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDS 361 AAG GLTGGGT+LP+SDVIRLARHA+HYLA+FDRG+A+ LYH KRLA+P QRI+LYAKD Sbjct 306 AAGRGLTGGGTLLPMSDVIRLARHAHHYLAVFDRGEAIGLYHAKRLATPGQRIVLYAKDR 365 Query 362 GCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEW 421 GC+ PGCDV GY CEVHHV +A TD+N LTL CG H L E+GW TRKNAHGDTEW Sbjct 366 GCTRPGCDVAGYQCEVHHVAAWAISGRTDINQLTLACGPDHKLLEQGWRTRKNAHGDTEW 425 Query 422 LPPPHLDHGQPRVNTFHHPEKLLADDEGD 450 LPPPHLDHGQPR NT+HHPEKLL D D Sbjct 426 LPPPHLDHGQPRTNTYHHPEKLLRDSADD 454 >gi|118617874|ref|YP_906206.1| hypothetical protein MUL_2371 [Mycobacterium ulcerans Agy99] gi|118569984|gb|ABL04735.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=462 Score = 585 bits (1507), Expect = 8e-165, Method: Compositional matrix adjust. Identities = 293/449 (66%), Positives = 358/449 (80%), Gaps = 0/449 (0%) Query 2 CSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIG 61 CS RE + L A+ ++ ++F+ALTTPERL +LE E R+LP+ ++ L+NQ+ Sbjct 6 CSDRESVVATLDRLDRAVDALVEVSFEALTTPERLRVLERLEVVARRLPAAQYALVNQLD 65 Query 62 EQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQR 121 EQ E ELGG+L +A RLRITRSEA RRVAEAA++G RRAL+G+P+ P+LTATA A R Sbjct 66 EQPGEAELGGRLAAVVASRLRITRSEAGRRVAEAAEVGPRRALSGQPVGPVLTATAAALR 125 Query 122 HGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNP 181 G++G+GHV VIR F +LP+ VD+ T ++AE LAK ATQ+RPDQLA+LA R+MDCLNP Sbjct 126 QGVVGEGHVRVIRDFFRQLPAGVDVGTRDRAEAHLAKLATQFRPDQLARLAGRLMDCLNP 185 Query 182 DGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAP 241 DG ++DEDRARRRGL+LG+Q +DGMSR+SG++TPE RA +EAVWAKLAAPGMCNPE +A Sbjct 186 DGRHSDEDRARRRGLSLGRQGLDGMSRISGWLTPEARAGLEAVWAKLAAPGMCNPEDEAA 245 Query 242 CVNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEA 301 V+G S++ A RD+RS QR HD NA LR++L SG LGQHNGLPASIIV+TTLK+LEA Sbjct 246 VVDGPVSRDAADRDSRSVSQRQHDGFNAALRAVLASGELGQHNGLPASIIVSTTLKELEA 305 Query 302 AAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDS 361 AAG GLTGGGT+LP+SDVIRLARHA+HYLA+FDRG+A+ LYH KRLA+P QRI+LYAKD Sbjct 306 AAGRGLTGGGTLLPMSDVIRLARHAHHYLAVFDRGEAIGLYHAKRLATPGQRIVLYAKDR 365 Query 362 GCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEW 421 GC+ PGCDV GY CEVHHV +A TD+N LTL CG H L E+GW TRKNAHGDTEW Sbjct 366 GCTRPGCDVAGYQCEVHHVAAWAISGRTDINQLTLACGPDHKLLEQGWRTRKNAHGDTEW 425 Query 422 LPPPHLDHGQPRVNTFHHPEKLLADDEGD 450 LPPPHLDHGQPR N++HHPEKLL D D Sbjct 426 LPPPHLDHGQPRTNSYHHPEKLLRDSADD 454 >gi|340628437|ref|YP_004746889.1| hypothetical protein MCAN_34831 [Mycobacterium canettii CIPT 140010059] gi|340006627|emb|CCC45814.1| putative uncharacterized protein [Mycobacterium canettii CIPT 140010059] Length=453 Score = 583 bits (1503), Expect = 2e-164, Method: Compositional matrix adjust. Identities = 290/448 (65%), Positives = 350/448 (79%), Gaps = 0/448 (0%) Query 4 TREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQ 63 +RE I E F +L L R+ ++FD L+TPERLA+LE E R+LP+V H LINQ+ Q Sbjct 5 SRERIVEVFDALDAELDRLGEVSFDVLSTPERLAMLERLEGLVRRLPAVGHALINQLDAQ 64 Query 64 STEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHG 123 ++EEELGG L LA+RLRIT+ +A RR+A+AADLG RRALTGEPL P LTATA AQR G Sbjct 65 ASEEELGGTLCCALANRLRITKPDAARRIADAADLGPRRALTGEPLAPQLTATATAQRQG 124 Query 124 LIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDG 183 LIG+GH++VIR+F LP+ VD+ T E A+ DLA +A QYRPD+LA+ A R+MD L+PDG Sbjct 125 LIGEGHIKVIRSFFAHLPAEVDVSTREAADADLAGKAAQYRPDELARYARRVMDWLHPDG 184 Query 184 DYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCV 243 D+TD +RAR+RG+TLG Q DGMSRLSGY+TPE RAT EAV AKLAAPG CNPE P + Sbjct 185 DFTDTERARKRGITLGNQQYDGMSRLSGYLTPEARATFEAVLAKLAAPGACNPEDDIPVI 244 Query 244 NGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAA 303 + P ++ RDTRS QRNHD L A LR+L+ SG LGQHNGLP SI+VTTTL DL+ AA Sbjct 245 DAEPDQDAVGRDTRSQAQRNHDGLLAGLRALIASGKLGQHNGLPVSIVVTTTLTDLQNAA 304 Query 304 GAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGC 363 G G TGGG++LP++DVIR+A HA+HYLAIFD GK LALYHTKRLASPAQRIML+A+D GC Sbjct 305 GKGFTGGGSLLPMADVIRMASHAHHYLAIFDHGKPLALYHTKRLASPAQRIMLFARDRGC 364 Query 364 SAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWLP 423 + PGCD P Y+ + HHV +A R TD+ DLTL CG + LAE+GW TRKN HGDTEWLP Sbjct 365 TKPGCDAPAYHSQAHHVQGWASTRRTDITDLTLACGPDNRLAEKGWITRKNTHGDTEWLP 424 Query 424 PPHLDHGQPRVNTFHHPEKLLADDEGDP 451 P HLDHGQPR+NTFHHPEKLL DD+ +P Sbjct 425 PAHLDHGQPRINTFHHPEKLLRDDDDEP 452 >gi|41409558|ref|NP_962394.1| hypothetical protein MAP3460c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398389|gb|AAS06010.1| hypothetical protein MAP_3460c [Mycobacterium avium subsp. paratuberculosis K-10] Length=461 Score = 577 bits (1486), Expect = 2e-162, Method: Compositional matrix adjust. Identities = 294/444 (67%), Positives = 340/444 (77%), Gaps = 1/444 (0%) Query 2 CSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIG 61 CS+REEI + F +L A+ R+ L+FDALT E L+LL+ CET RR+LP EH LIN + Sbjct 3 CSSREEIVKVFDALDAAVDRLGELSFDALTPRECLSLLQRCETVRRRLPVPEHPLINALA 62 Query 62 EQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQR 121 ++ ELGG+L +A+ I+R+EA RRV AADLG R LTGEPLPPLL ATA QR Sbjct 63 RDASPAELGGRLSHAIAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAARQR 122 Query 122 HGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNP 181 G +G V VIR F H+LP W+D T E+AE DLA++ T+YRP+QLA LA + DCLNP Sbjct 123 EGSLGLEQVAVIRKFCHQLPGWIDQATRERAEADLAREGTRYRPEQLAALAGTLADCLNP 182 Query 182 DGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAP 241 DG Y DEDRARRR LTLG Q DGMS L G+++PELRAT+EAV AKLAAPGMCNP ++P Sbjct 183 DGLYRDEDRARRRSLTLGNQHADGMSELRGWLSPELRATLEAVLAKLAAPGMCNPLDESP 242 Query 242 CVNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEA 301 CV G PS+ D RS QRNHD L A LR+LL SGNLGQHNGLPASIIVTTTL DLE Sbjct 243 CVEGTPSQHAIDGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLET 302 Query 302 AAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDS 361 AAG LTGGGT+LP+SDVIRL+RHA+HYLAIFD+GKALALYHTKRLASPAQRI+LYAKD Sbjct 303 AAGRRLTGGGTLLPMSDVIRLSRHAHHYLAIFDQGKALALYHTKRLASPAQRIVLYAKDR 362 Query 362 GCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERG-WTTRKNAHGDTE 420 GC+APGC +PGYY EVHH T YA C TD+NDLT CG HH L + G WTT KNA G+TE Sbjct 363 GCTAPGCTIPGYYSEVHHCTDYATCHTTDINDLTFACGPHHRLLQPGAWTTHKNAKGETE 422 Query 421 WLPPPHLDHGQPRVNTFHHPEKLL 444 W+PPPHLD QPR NTFHHPEKLL Sbjct 423 WIPPPHLDRNQPRTNTFHHPEKLL 446 >gi|296164917|ref|ZP_06847473.1| REP13E12 repeat protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899759|gb|EFG79209.1| REP13E12 repeat protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=458 Score = 575 bits (1483), Expect = 5e-162, Method: Compositional matrix adjust. Identities = 292/443 (66%), Positives = 345/443 (78%), Gaps = 0/443 (0%) Query 3 STREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGE 62 + RE+I +L A +R+ G ++ ALTTPERL +LE E R+L + H LINQ+GE Sbjct 4 TDREQIAADVEALCAAAARLQGHSYAALTTPERLGILETLEGVTRKLQAPSHELINQLGE 63 Query 63 QSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRH 122 Q+ ELGG+L LADRL I+R EA RRVAEAA+LG RRAL+GEPLPP+L ATA AQR Sbjct 64 QADPAELGGRLSWALADRLHISRGEASRRVAEAAELGPRRALSGEPLPPVLAATAAAQRA 123 Query 123 GLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPD 182 G IG HV VIR +LP VDL T E AER LA +AT+YRPDQLA LA ++DCL+PD Sbjct 124 GAIGSEHVAVIRRLFRQLPESVDLDTREHAERHLAGEATRYRPDQLATLARHLLDCLHPD 183 Query 183 GDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPC 242 G YTD DRAR RGL LG Q DGMS+LSG++TPE RAT EAV AKLAAPGMCNP+ +AP Sbjct 184 GHYTDADRARVRGLVLGHQQADGMSKLSGWLTPEARATWEAVLAKLAAPGMCNPDDEAPV 243 Query 243 VNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAA 302 V+G ++ +RDTR+ QRNHD L+A LR++L SG LG+HNGLPA+I+VTTTLK+LEAA Sbjct 244 VDGPATEAAVQRDTRTAAQRNHDGLHAALRAMLASGTLGRHNGLPATIVVTTTLKELEAA 303 Query 303 AGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSG 362 AG GLTGGGTILP+SDVIRLARHA+HYLAIFD K +ALYHTKRLASP QR++LYAKD G Sbjct 304 AGRGLTGGGTILPMSDVIRLARHAHHYLAIFDNAKPVALYHTKRLASPGQRVVLYAKDRG 363 Query 363 CSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWL 422 CS PGCDVPGY CEVHHVT +A TD++ LTL CG HH L + GWTTRK +GDT+W+ Sbjct 364 CSHPGCDVPGYLCEVHHVTDWAHTHRTDIDQLTLACGPHHRLLDNGWTTRKRPNGDTDWI 423 Query 423 PPPHLDHGQPRVNTFHHPEKLLA 445 PPPHLDHGQPR NTFHHPEK+LA Sbjct 424 PPPHLDHGQPRTNTFHHPEKILA 446 >gi|41407982|ref|NP_960818.1| hypothetical protein MAP1884c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396336|gb|AAS04201.1| hypothetical protein MAP_1884c [Mycobacterium avium subsp. paratuberculosis K-10] Length=468 Score = 569 bits (1467), Expect = 3e-160, Method: Compositional matrix adjust. Identities = 312/446 (70%), Positives = 356/446 (80%), Gaps = 0/446 (0%) Query 3 STREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGE 62 STREEI +L A+SRVLG ++DALTTPERL LLE E R+L + H LINQ+ E Sbjct 4 STREEIRADVDALRAAVSRVLGHSYDALTTPERLRLLEIFERETRRLRAPGHQLINQLAE 63 Query 63 QSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRH 122 QS ELGG+L LA+RL ITRS+A RR+AEAADLG RRALTGEPLP LL ATA AQR+ Sbjct 64 QSDPTELGGRLSFALAERLHITRSDASRRIAEAADLGPRRALTGEPLPALLPATAAAQRY 123 Query 123 GLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPD 182 G IG HV VIR F +LP VD++T E AER LA QATQ+RPDQL+KLA R+MDCLNPD Sbjct 124 GAIGTDHVAVIRQFFDQLPEAVDVETCEHAERQLAAQATQFRPDQLSKLARRLMDCLNPD 183 Query 183 GDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPC 242 G Y+DEDRAR RGL LG Q DGMSRLSG++TPE RA+ EAV AKLAA GMCNP+ AP Sbjct 184 GRYSDEDRARARGLVLGNQQADGMSRLSGWLTPEARASWEAVLAKLAALGMCNPDDDAPV 243 Query 243 VNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAA 302 V+G P + A+RD+RS QRNHD LNA LR+LL G LGQHNGLPASIIVTTTL+DLE+A Sbjct 244 VDGPPPEAAAQRDSRSAAQRNHDGLNAALRALLAGGKLGQHNGLPASIIVTTTLRDLESA 303 Query 303 AGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSG 362 AG GLTGGGT+LP+SDVIRLARHA+HYLA+FD GK LALYHTKRLASP QRI+LYAKD G Sbjct 304 AGKGLTGGGTLLPMSDVIRLARHAHHYLAVFDNGKPLALYHTKRLASPGQRIVLYAKDRG 363 Query 363 CSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWL 422 CS PGCDV GY CEVHHVT YA+C TD++ LT CGGHHPLAE+GW TRKN G+TEW+ Sbjct 364 CSHPGCDVSGYSCEVHHVTGYAKCGRTDIDQLTFACGGHHPLAEQGWITRKNGRGETEWI 423 Query 423 PPPHLDHGQPRVNTFHHPEKLLADDE 448 PPPHL+ GQPRVN+FHHPE +L D E Sbjct 424 PPPHLERGQPRVNSFHHPEDMLCDTE 449 >gi|15608840|ref|NP_216218.1| hypothetical protein Rv1702c [Mycobacterium tuberculosis H37Rv] gi|15841159|ref|NP_336196.1| hypothetical protein MT1741 [Mycobacterium tuberculosis CDC1551] gi|31792888|ref|NP_855381.1| hypothetical protein Mb1728c [Mycobacterium bovis AF2122/97] 67 more sequence titles Length=454 Score = 568 bits (1465), Expect = 5e-160, Method: Compositional matrix adjust. Identities = 290/451 (65%), Positives = 343/451 (77%), Gaps = 2/451 (0%) Query 3 STREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGE 62 S+REE AF +L TAL+RVL ++ D LT PE LA+L+ CE RR+LP+ EH IN++ + Sbjct 4 SSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINKLAD 63 Query 63 QSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRH 122 Q+ + ELGGKL LA+RL I+R EA RR+ EAADLG RR LTG+PLPPLLTATA AQR Sbjct 64 QTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAAQRA 123 Query 123 GLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPD 182 G +G HV+VIR F+H+LP VDL T EKAE +LA ++RPDQL KLA ++ DCLNPD Sbjct 124 GHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNPD 183 Query 183 GDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPC 242 G+Y D DRARRR + LG Q DGMS +SGY+TPE RAT++AV AKLAAPGM NP PC Sbjct 184 GNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTPC 243 Query 243 VNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAA 302 + G PS+ DTRS QR+HD L A LR+LL SG LGQHNGLPA+IIV+T+L +L++ Sbjct 244 LAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQSR 303 Query 303 AGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSG 362 AG LTGGGT+LP+SDVIRLA HANHYL IFD G+ LALYHTKRLASP QRI+LYAKD G Sbjct 304 AGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDRG 363 Query 363 CSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAER-GWTTRKNAHGDTEW 421 CS P CDVPGY EVHHVT +AQC+ TD+N+LT GCG HH LA GW TRK G TEW Sbjct 364 CSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGTTEW 423 Query 422 LPPPHLDHGQPRVNTFHHPEKLLAD-DEGDP 451 LPP HLDHGQPR N++ HPEKLL D DE DP Sbjct 424 LPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 >gi|342861726|ref|ZP_08718372.1| hypothetical protein MCOL_22671 [Mycobacterium colombiense CECT 3035] gi|342130860|gb|EGT84156.1| hypothetical protein MCOL_22671 [Mycobacterium colombiense CECT 3035] Length=453 Score = 568 bits (1463), Expect = 8e-160, Method: Compositional matrix adjust. Identities = 295/447 (66%), Positives = 346/447 (78%), Gaps = 2/447 (0%) Query 5 REEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQS 64 REE+ L T +SR ++ LT PERL LLE E R+L + H LINQI EQ+ Sbjct 6 REELQGDVDVLRTVVSRFCARSYATLTNPERLQLLEIFERETRRLQTPGHELINQIAEQA 65 Query 65 TEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHGL 124 ELGGKL LADRL I+R+EA RR+AEAAD+G RRALTG+PL P+L ATA AQR G Sbjct 66 DPTELGGKLSWALADRLHISRAEAGRRIAEAADVGPRRALTGQPLAPVLPATAAAQRDGA 125 Query 125 IGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDGD 184 IG HV VIR F H+LP VDL+T AE+ LA +AT++RP+ AKLA R+MDCLNPDG Sbjct 126 IGADHVAVIRRFFHQLPESVDLETCVHAEKHLAAKATEFRPEHFAKLARRLMDCLNPDGS 185 Query 185 YTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCVN 244 YTD DRAR RGL LG+Q DGMSRLSG++TPE RA+ EAV AKLAAPGM NP+ + P ++ Sbjct 186 YTDADRARMRGLVLGQQQADGMSRLSGWLTPEARASWEAVLAKLAAPGMANPDDEQPVLD 245 Query 245 GAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAAG 304 GAPS++ +RDTRS QRNHD LNA LR++L SGNLGQHNGLPASIIVTTTL+DLE G Sbjct 246 GAPSQDAVQRDTRSAGQRNHDGLNAALRAVLASGNLGQHNGLPASIIVTTTLEDLERTTG 305 Query 305 AGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGCS 364 GLTGGGT+LP+SDVIRLARHA+HYLAIFD GKALALYH KRLA+P QRI+LYAKD GC+ Sbjct 306 HGLTGGGTLLPMSDVIRLARHAHHYLAIFDHGKALALYHAKRLAAPGQRIVLYAKDRGCT 365 Query 365 APGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWLPP 424 APGCDV GYYCEVHHV +A TD++ LTL CG HH L ++GWTTR+ A+GDTEW+PP Sbjct 366 APGCDVAGYYCEVHHVQDWAHTHRTDIDQLTLACGPHHRLLDKGWTTRQRANGDTEWIPP 425 Query 425 PHLDHGQPRVNTFHHPEKLLA--DDEG 449 PHLD GQ R NTFHHPEK+LA DD+G Sbjct 426 PHLDRGQRRTNTFHHPEKVLAGEDDDG 452 >gi|254775286|ref|ZP_05216802.1| hypothetical protein MaviaA2_11531 [Mycobacterium avium subsp. avium ATCC 25291] Length=469 Score = 567 bits (1461), Expect = 1e-159, Method: Compositional matrix adjust. Identities = 292/446 (66%), Positives = 342/446 (77%), Gaps = 0/446 (0%) Query 5 REEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQS 64 RE+I + + L ++R+ ++DALT PER+ LLE E R+L H LINQI + + Sbjct 7 REDIQDDYDVLRAVVARIQRHSYDALTNPERIRLLEVLEHQTRRLQVPGHQLINQIEQDA 66 Query 65 TEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHGL 124 T E+GGKL LADRL ITR+EA RR+ +A DLG RR LTGEPLPP ATA AQR G Sbjct 67 TPAEIGGKLAHLLADRLLITRAEAARRIDDARDLGVRRTLTGEPLPPRYAATAAAQRDGR 126 Query 125 IGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDGD 184 IG HV VIR F +LP WVD T + AE DLA+ A ++RP+ L K+A RI LNPDG Sbjct 127 IGASHVAVIRRFFDQLPCWVDAPTRDAAEADLARWAGEHRPESLRKVADRIACYLNPDGV 186 Query 185 YTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCVN 244 + DEDR R RGLTLG Q DGMS+L G++TPE RATIEAV AKLAAPGMCNP+ AP V+ Sbjct 187 FHDEDRLRHRGLTLGAQQPDGMSQLRGWLTPEARATIEAVLAKLAAPGMCNPDDPAPVVD 246 Query 245 GAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAAG 304 G P +E +RD+RS QRNHD LNA LR++L SG LGQHNGLPASIIVTTTL+DLE+AAG Sbjct 247 GPPGQEAIQRDSRSAAQRNHDGLNAALRAVLASGKLGQHNGLPASIIVTTTLRDLESAAG 306 Query 305 AGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGCS 364 GLTGGGT+LP+SDVIRLARHA+HYLA+FD GK LALYHTKRLASP QRI+LYAKD GCS Sbjct 307 QGLTGGGTLLPMSDVIRLARHAHHYLAVFDNGKPLALYHTKRLASPGQRIVLYAKDRGCS 366 Query 365 APGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWLPP 424 PGCDV GYYCEVHHVT YA+C TD++ LT CGGHHPLAE+GW TRKN G+TEW+PP Sbjct 367 HPGCDVSGYYCEVHHVTGYAKCGRTDIDQLTFACGGHHPLAEQGWITRKNGRGETEWIPP 426 Query 425 PHLDHGQPRVNTFHHPEKLLADDEGD 450 PHLDHG+PR N FHHPEKL+AD + D Sbjct 427 PHLDHGRPRTNAFHHPEKLVADSDND 452 >gi|289569750|ref|ZP_06449977.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289543504|gb|EFD47152.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] Length=454 Score = 565 bits (1457), Expect = 5e-159, Method: Compositional matrix adjust. Identities = 289/451 (65%), Positives = 342/451 (76%), Gaps = 2/451 (0%) Query 3 STREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGE 62 S+REE AF +L TAL+RVL ++ D LT PE LA+L+ CE RR+LP+ EH IN++ + Sbjct 4 SSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINKLAD 63 Query 63 QSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRH 122 Q+ + ELGGKL LA+RL I+R EA RR+ EAADLG RR LTG+PLPPLLTATA AQR Sbjct 64 QTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAAQRA 123 Query 123 GLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPD 182 G +G HV+VIR F+H+LP VDL T EKAE +LA ++RPDQL KLA ++ DCLNPD Sbjct 124 GHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNPD 183 Query 183 GDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPC 242 G+Y D DRARRR + LG Q DGMS +SGY+TPE RAT++AV AKLAAPGM NP PC Sbjct 184 GNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTPC 243 Query 243 VNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAA 302 + G PS+ DTRS QR+HD L A LR+LL SG LGQHNGLPA+IIV+T+L +L++ Sbjct 244 LAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQSR 303 Query 303 AGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSG 362 AG LTGGGT+LP+SDVIRLA HANHYL IFD G+ LALYHTKRLASP QRI+LYAKD G Sbjct 304 AGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDRG 363 Query 363 CSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAER-GWTTRKNAHGDTEW 421 CS P CDVPGY EVHHVT +AQ + TD+N+LT GCG HH LA GW TRK G TEW Sbjct 364 CSFPNCDVPGYLTEVHHVTDFAQSQETDINELTQGCGPHHQLATTGGWITRKRKDGTTEW 423 Query 422 LPPPHLDHGQPRVNTFHHPEKLLAD-DEGDP 451 LPP HLDHGQPR N++ HPEKLL D DE DP Sbjct 424 LPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 >gi|118463168|ref|YP_881993.1| hypothetical protein MAV_2806 [Mycobacterium avium 104] gi|118164455|gb|ABK65352.1| conserved hypothetical protein [Mycobacterium avium 104] Length=469 Score = 564 bits (1453), Expect = 1e-158, Method: Compositional matrix adjust. Identities = 287/446 (65%), Positives = 339/446 (77%), Gaps = 0/446 (0%) Query 5 REEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQS 64 RE+I + + L ++R+ ++DALT PER+ LLE E R+L H LINQI + + Sbjct 7 REDIQDDYDVLRAVVARIQRHSYDALTNPERIRLLEVLEYQTRRLQVPGHQLINQIEQDA 66 Query 65 TEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHGL 124 T E+GGKL LADRL ITR+EA RR+ +A DLG RR LTGEPLPP ATA AQR G Sbjct 67 TPAEIGGKLAHVLADRLLITRAEAARRIDDARDLGVRRTLTGEPLPPRYAATAAAQRDGR 126 Query 125 IGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDGD 184 IG HV VIR F +LP WVD T + AE DLA+ A ++RP+ L K+A RI NPDG Sbjct 127 IGASHVAVIRRFFDQLPCWVDAPTRDAAEADLARWAGEHRPESLRKVADRIACYFNPDGV 186 Query 185 YTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCVN 244 + DEDR R RGLTLG Q DGMS+L G++TPE RAT+EAV AKLAAPGMCNP+ AP V+ Sbjct 187 FHDEDRLRHRGLTLGAQQPDGMSQLRGWLTPEARATVEAVLAKLAAPGMCNPDDDAPVVD 246 Query 245 GAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAAG 304 G P + ++RD+RS QRNHD LNA LR+LL G LGQHNGLPASIIVTTTL+DLE+AAG Sbjct 247 GPPPEAASQRDSRSAAQRNHDGLNAALRALLAGGKLGQHNGLPASIIVTTTLRDLESAAG 306 Query 305 AGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGCS 364 GLT GGT+LP+S+VIRLARHA+HYLA+FD GK LALYHTKRLASP QRI+LYAKD GCS Sbjct 307 KGLTAGGTLLPMSEVIRLARHAHHYLAVFDNGKPLALYHTKRLASPGQRIVLYAKDRGCS 366 Query 365 APGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWLPP 424 PGCDV GYYCEVHHVT YA+C TD++ LT CGGHHPLAE+GW TRKN G+TEW+PP Sbjct 367 HPGCDVSGYYCEVHHVTGYAKCGRTDIDQLTFACGGHHPLAEQGWITRKNGRGETEWIPP 426 Query 425 PHLDHGQPRVNTFHHPEKLLADDEGD 450 PHLDHG+PR N FHHPEKL+AD + D Sbjct 427 PHLDHGRPRTNAFHHPEKLVADSDND 452 >gi|340628249|ref|YP_004746701.1| hypothetical protein MCAN_32901 [Mycobacterium canettii CIPT 140010059] gi|340006439|emb|CCC45621.1| putative uncharacterized protein [Mycobacterium canettii CIPT 140010059] Length=453 Score = 563 bits (1452), Expect = 2e-158, Method: Compositional matrix adjust. Identities = 290/451 (65%), Positives = 350/451 (78%), Gaps = 0/451 (0%) Query 1 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI 60 + ++REE+ EAF +L L R+ ++F+ LT+PERLA+LE E R+LP+V H LINQ+ Sbjct 2 LANSREELVEAFDALDAELDRLDEVSFEVLTSPERLAMLERLEGLVRRLPAVGHALINQL 61 Query 61 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ 120 Q++EEELGG L LA+RLRIT+ EA RR+A+AADLG RRALTGEPL P LTATA AQ Sbjct 62 DAQASEEELGGTLCCALANRLRITKPEAARRIADAADLGPRRALTGEPLAPQLTATATAQ 121 Query 121 RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN 180 R GLIG+ H++VIR+F LP+ VD+ T E AE DLA +A QYRPD+LA+ A R+MD L+ Sbjct 122 RQGLIGEAHIKVIRSFFAHLPAEVDVSTREAAEADLAGKAAQYRPDELARYARRVMDWLH 181 Query 181 PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA 240 PDGD+TD +RAR+RG+TLG Q+ DGMSRLSGY+TPE RAT EAV AKLAAPGMCNP+ Sbjct 182 PDGDFTDTERARKRGITLGNQEYDGMSRLSGYLTPETRATFEAVLAKLAAPGMCNPDDHT 241 Query 241 PCVNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLE 300 P ++ P RDTRS QRNHD L A LR+L+ SG LGQHNGLP SI+VTTTL DL+ Sbjct 242 PVIDTTPDAAAIDRDTRSQAQRNHDGLLAGLRALIASGKLGQHNGLPVSIVVTTTLTDLQ 301 Query 301 AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKD 360 AG G TGGGT+LP++DVIR+A HA+HYLAIFD G LALYHTKRLASPAQRIML+A+D Sbjct 302 TGAGKGFTGGGTLLPMADVIRMASHAHHYLAIFDHGTPLALYHTKRLASPAQRIMLFARD 361 Query 361 SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTE 420 GC+ PGCD P Y+ + HHV +A R TD+ DLTL CG + LAE+GW TRKN HG TE Sbjct 362 RGCTKPGCDAPAYHSQAHHVQGWASTRRTDITDLTLACGPDNRLAEKGWITRKNTHGHTE 421 Query 421 WLPPPHLDHGQPRVNTFHHPEKLLADDEGDP 451 WLPPPHLDHGQPR NTFHHPEKLL DD+ +P Sbjct 422 WLPPPHLDHGQPRTNTFHHPEKLLHDDDDEP 452 >gi|41408593|ref|NP_961429.1| hypothetical protein MAP2495 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396951|gb|AAS04812.1| hypothetical protein MAP_2495 [Mycobacterium avium subsp. paratuberculosis K-10] Length=472 Score = 562 bits (1448), Expect = 4e-158, Method: Compositional matrix adjust. Identities = 297/449 (67%), Positives = 339/449 (76%), Gaps = 3/449 (0%) Query 5 REEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQS 64 R+ I+ AF +L AL V L FD LT E LALL CE ARR+LP EH LIN + + Sbjct 9 RDAISAAFDALDAALDGVAALGFDGLTPRECLALLGRCEKARRRLPVAEHQLINALARDA 68 Query 65 TEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHGL 124 T ELGG+L +A+ I+R+EA RRV AADLG R LTGEPLPPLL ATA QR G Sbjct 69 TPAELGGRLSHAIAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAARQREGS 128 Query 125 IGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDGD 184 +G V VIR F H+LP W+D T E+AE DLA++AT+YRP+QLA LA + DCLNPDG Sbjct 129 LGLEQVAVIRKFCHQLPGWIDQATRERAEADLAREATRYRPEQLAALAGTLADCLNPDGL 188 Query 185 YTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCVN 244 Y DEDRARRR LTLG Q DGMS L G+++PELRAT+EAV AKLAAPGMCNP ++PCV Sbjct 189 YRDEDRARRRSLTLGNQQADGMSELRGWLSPELRATLEAVLAKLAAPGMCNPLDESPCVE 248 Query 245 GAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAAG 304 G PS+ D RS QRNHD L A LR+LL SGNLGQHNGLPASIIVTTTL DLE AAG Sbjct 249 GTPSQHAIDGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLETAAG 308 Query 305 AGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGCS 364 LTGGGT+LP+SDVIRL+RHA+HYLAIFD+GKALALYHTKRLASPAQRI+LYAKD GC+ Sbjct 309 RRLTGGGTLLPMSDVIRLSRHAHHYLAIFDQGKALALYHTKRLASPAQRIVLYAKDRGCT 368 Query 365 APGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERG-WTTRKNAHGDTEWLP 423 APGC +PGYY EVHH T YA C TD+NDLT CG HH L + G WTT KNA G+TEW+P Sbjct 369 APGCTIPGYYSEVHHCTDYATCHTTDINDLTFACGPHHRLLQPGAWTTHKNAKGETEWIP 428 Query 424 PPHLDHGQPRVNTFHHPEKLLA--DDEGD 450 PPHLD QPR NTFHHPEKLL DD+G+ Sbjct 429 PPHLDRNQPRTNTFHHPEKLLQGEDDDGE 457 >gi|240172437|ref|ZP_04751096.1| hypothetical protein MkanA1_24195 [Mycobacterium kansasii ATCC 12478] Length=454 Score = 562 bits (1448), Expect = 5e-158, Method: Compositional matrix adjust. Identities = 283/448 (64%), Positives = 344/448 (77%), Gaps = 1/448 (0%) Query 5 REEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQS 64 REEI E F +L L R+ L+F+ LT PERL LE E R+L + +H LINQ+G Q+ Sbjct 6 REEIVEVFDALDAELDRLCELSFEVLTIPERLRALERLERVARRLRAPQHALINQLGAQA 65 Query 65 TEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHGL 124 E ELG KL LADRLRIT++EA RR+ EAADLG RRALTGEPL P L+ATA AQR GL Sbjct 66 GEAELGAKLRSALADRLRITKAEAGRRIDEAADLGPRRALTGEPLAPQLSATAAAQRDGL 125 Query 125 IGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDGD 184 IGDGHV VIR F+ LP+ VDL T E A+ DLA++A+ YR D+LAK A RIMD LNPDG+ Sbjct 126 IGDGHVRVIRGFLAHLPAEVDLPTREAADADLARKASSYRRDELAKYAQRIMDWLNPDGE 185 Query 185 YTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCVN 244 +++RAR+RG+T+G+Q+ DGMSR+SGY+TPE RAT+E V AKLAAPG CNP+ + P ++ Sbjct 186 LREQERARKRGITIGRQEYDGMSRISGYLTPEARATVEPVLAKLAAPGACNPDDQTPVID 245 Query 245 GAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAAG 304 P + RDTRS QRNHD L A LR LL SG+LG+HNGLP SI+VTTTLKDL+AAAG Sbjct 246 TTPDADAVDRDTRSQAQRNHDGLLAGLRGLLCSGDLGRHNGLPVSIVVTTTLKDLQAAAG 305 Query 305 AGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGCS 364 TGGG++LP+SD+IRLA HANHYLA+FD GKALALYH+KRLA PAQRIML+AKD GC+ Sbjct 306 KAHTGGGSLLPMSDLIRLASHANHYLALFDHGKALALYHSKRLACPAQRIMLFAKDRGCT 365 Query 365 APGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWLPP 424 PGCD P Y+ +VHHV +A TD+NDLTL CG + LAE+GW TRKNA GDTEW+PP Sbjct 366 KPGCDAPAYHSQVHHVRGWAATGRTDINDLTLACGIDNRLAEKGWRTRKNARGDTEWIPP 425 Query 425 PHLDHGQPRVNTFHHPEKLLAD-DEGDP 451 HLD GQPR N +HHPE+ L+D D+ +P Sbjct 426 AHLDRGQPRTNPYHHPERFLSDGDDAEP 453 >gi|254818822|ref|ZP_05223823.1| hypothetical protein MintA_02799 [Mycobacterium intracellulare ATCC 13950] Length=454 Score = 550 bits (1417), Expect = 2e-154, Method: Compositional matrix adjust. Identities = 271/448 (61%), Positives = 332/448 (75%), Gaps = 0/448 (0%) Query 3 STREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGE 62 S+R+EI E F ++ L R+ L+F+ TTPERL LE E R+L + +H LINQ+ Sbjct 4 SSRDEIVEVFDAIDADLDRLCALSFEVFTTPERLRTLERIERVARRLRAPQHELINQLRA 63 Query 63 QSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRH 122 Q+T ELGG L LADRLRIT+SEA RRV EAADLG+R+ALTGE L P L+ATA AQR Sbjct 64 QATTTELGGTLRCALADRLRITKSEAGRRVDEAADLGERQALTGEVLAPTLSATAAAQRQ 123 Query 123 GLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPD 182 GLIGDGHV VIR F LPS VD E A++DLA+QA +RPD+L K A R+M +NPD Sbjct 124 GLIGDGHVRVIRGFFANLPSGVDPCIQEHADQDLAQQARGFRPDELQKYAHRLMGWINPD 183 Query 183 GDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPC 242 G D +RAR+RG+T+G Q DGMS + GY+TPE RAT E V AKL APG CNP+ P Sbjct 184 GKLKDGERARKRGITIGAQQYDGMSPIRGYLTPEARATFEPVLAKLGAPGACNPDGDVPF 243 Query 243 VNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAA 302 ++ P RRD R+ QRNHD L LR+LL SG LG HNGLP S++V+T+L++LEAA Sbjct 244 IDEVPDDVAVRRDLRTPAQRNHDGLLVGLRALLASGELGCHNGLPVSVVVSTSLQELEAA 303 Query 303 AGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSG 362 AG G+TGGG+++P+SD+IR+A HA+HYLAIFDRG+AL+L+HTKRLASPAQRIMLYAKD G Sbjct 304 AGKGITGGGSLVPMSDLIRMASHAHHYLAIFDRGRALSLHHTKRLASPAQRIMLYAKDRG 363 Query 363 CSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWL 422 C+ PGCD P Y+ +VHHV+ + TD++DLTL CG + LAE+GWTTRKNA GDTEWL Sbjct 364 CTKPGCDAPAYHSQVHHVSGWTTTHRTDIDDLTLACGPDNRLAEKGWTTRKNARGDTEWL 423 Query 423 PPPHLDHGQPRVNTFHHPEKLLADDEGD 450 PP HLDHGQPR N FHHPE+ L DE D Sbjct 424 PPAHLDHGQPRTNAFHHPERFLNYDEDD 451 >gi|342861564|ref|ZP_08718211.1| hypothetical protein MCOL_21866 [Mycobacterium colombiense CECT 3035] gi|342131053|gb|EGT84342.1| hypothetical protein MCOL_21866 [Mycobacterium colombiense CECT 3035] Length=452 Score = 546 bits (1406), Expect = 4e-153, Method: Compositional matrix adjust. Identities = 291/447 (66%), Positives = 342/447 (77%), Gaps = 1/447 (0%) Query 5 REEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQS 64 ++++ E F +L A R+ L+ DAL ++LA+L+ CE RR+LP+VEH LIN + QS Sbjct 4 QQDVDEVFDALDAAWGRLCALSLDALNPRQQLAVLQRCEQQRRRLPAVEHPLINSLAGQS 63 Query 65 TEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHGL 124 EELGG + + + I+R+EA RR+ EA DLG R LTGEPLPPLL ATA AQR G Sbjct 64 PSEELGGTVVHAITEATLISRAEASRRINEARDLGPRHGLTGEPLPPLLAATAAAQRAGA 123 Query 125 IGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDGD 184 +G G V VIR F H+LP W+D+ T E+AE LAK+ +++ P+QL +LA + + LNPDG Sbjct 124 LGSGQVAVIRKFFHQLPGWIDMPTREQAEARLAKEGSRFGPEQLTELARAMTNALNPDGT 183 Query 185 YTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCVN 244 +TDEDRAR RGLTLG Q DGMS L G +TPELRAT+EAV AKLAAPGMCNP + PCV+ Sbjct 184 FTDEDRARARGLTLGNQQADGMSALRGLITPELRATLEAVLAKLAAPGMCNPFDETPCVD 243 Query 245 GAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAAG 304 GAP++E RD RS QRNHD LNA LR+LL SG LGQHNGLPASI+VTTTL++LE+AAG Sbjct 244 GAPTEEAIERDPRSAAQRNHDGLNAALRALLASGELGQHNGLPASIVVTTTLQELESAAG 303 Query 305 AGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGCS 364 GLTGGGTILP+SDVIRLARHA HYLAIFD+GKALALYHTKRLASP QRI+LYAKD GCS Sbjct 304 RGLTGGGTILPMSDVIRLARHARHYLAIFDKGKALALYHTKRLASPGQRIVLYAKDRGCS 363 Query 365 APGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAE-RGWTTRKNAHGDTEWLP 423 PGC VPGYY EVHHVT +A C TDVNDLT CG HH L GWTTRKN GDTEW P Sbjct 364 NPGCTVPGYYSEVHHVTDWATCHTTDVNDLTFACGPHHRLLRPGGWTTRKNTRGDTEWKP 423 Query 424 PPHLDHGQPRVNTFHHPEKLLADDEGD 450 PPHLD GQPR NTFHHPEKLL +D+ D Sbjct 424 PPHLDRGQPRTNTFHHPEKLLREDDDD 450 >gi|254550150|ref|ZP_05140597.1| hypothetical protein Mtube_06779 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|313658009|ref|ZP_07814889.1| hypothetical protein MtubKV_06299 [Mycobacterium tuberculosis KZN V2475] Length=454 Score = 545 bits (1405), Expect = 4e-153, Method: Compositional matrix adjust. Identities = 283/447 (64%), Positives = 338/447 (76%), Gaps = 0/447 (0%) Query 4 TREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQ 63 TREEI+ A + +LSRVL L DALTTPE LA L+ E RR+ + EH LINQ+ Q Sbjct 5 TREEISAALDAYHASLSRVLDLKCDALTTPELLACLQRLEVERRRQGAAEHALINQLAGQ 64 Query 64 STEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHG 123 + EEELGG L LA+RL IT EA RR+AEA DLG+RRALTGEPLP LTATA AQR G Sbjct 65 ACEEELGGTLRTALANRLHITPGEASRRIAEAEDLGERRALTGEPLPAQLTATAAAQREG 124 Query 124 LIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDG 183 IG H++ I+AF L + VDL E AE LA+ AT RPD L LA ++MD L+PDG Sbjct 125 KIGREHIKEIQAFFKELSAAVDLGIREAAEAQLAELATSRRPDHLHGLATQLMDWLHPDG 184 Query 184 DYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCV 243 +++D++RAR+RG+T+GKQ+ DGMSR+SG +TPELRATIEAV AKLAAPG CNP+ + P V Sbjct 185 NFSDQERARKRGITMGKQEFDGMSRISGLLTPELRATIEAVLAKLAAPGACNPDDQTPVV 244 Query 244 NGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAA 303 + P + RRDTRS QRNHDA A LR LL SG LGQH GLP +I+V+TTLK+LEAA Sbjct 245 DDTPDADAVRRDTRSQAQRNHDAFLAALRGLLASGELGQHKGLPVTIVVSTTLKELEAAT 304 Query 304 GAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGC 363 G G+TGGG+ +P+SD+IR+A HANHYLA+FD K LALYHTKRLASPAQRIMLYAKD GC Sbjct 305 GKGVTGGGSRVPMSDLIRMASHANHYLALFDGAKPLALYHTKRLASPAQRIMLYAKDRGC 364 Query 364 SAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWLP 423 S PGCD P Y+ EVHHVTP+ TD+NDLTL CG + L E+GW TRKNAHGDTEWLP Sbjct 365 SRPGCDAPAYHSEVHHVTPWTTTHRTDINDLTLACGPDNRLVEKGWKTRKNAHGDTEWLP 424 Query 424 PPHLDHGQPRVNTFHHPEKLLADDEGD 450 PPHLDHGQPR+N +HHP K+L + + D Sbjct 425 PPHLDHGQPRINRYHHPAKILCEQDDD 451 >gi|253799808|ref|YP_003032809.1| hypothetical protein TBMG_02833 [Mycobacterium tuberculosis KZN 1435] gi|289555063|ref|ZP_06444273.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289744891|ref|ZP_06504269.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|253321311|gb|ACT25914.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|289439695|gb|EFD22188.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289685419|gb|EFD52907.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] Length=499 Score = 545 bits (1405), Expect = 5e-153, Method: Compositional matrix adjust. Identities = 283/447 (64%), Positives = 338/447 (76%), Gaps = 0/447 (0%) Query 4 TREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQ 63 TREEI+ A + +LSRVL L DALTTPE LA L+ E RR+ + EH LINQ+ Q Sbjct 50 TREEISAALDAYHASLSRVLDLKCDALTTPELLACLQRLEVERRRQGAAEHALINQLAGQ 109 Query 64 STEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHG 123 + EEELGG L LA+RL IT EA RR+AEA DLG+RRALTGEPLP LTATA AQR G Sbjct 110 ACEEELGGTLRTALANRLHITPGEASRRIAEAEDLGERRALTGEPLPAQLTATAAAQREG 169 Query 124 LIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDG 183 IG H++ I+AF L + VDL E AE LA+ AT RPD L LA ++MD L+PDG Sbjct 170 KIGREHIKEIQAFFKELSAAVDLGIREAAEAQLAELATSRRPDHLHGLATQLMDWLHPDG 229 Query 184 DYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCV 243 +++D++RAR+RG+T+GKQ+ DGMSR+SG +TPELRATIEAV AKLAAPG CNP+ + P V Sbjct 230 NFSDQERARKRGITMGKQEFDGMSRISGLLTPELRATIEAVLAKLAAPGACNPDDQTPLV 289 Query 244 NGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAA 303 + P + RRDTRS QRNHDA A LR LL SG LGQH GLP +I+V+TTLK+LEAA Sbjct 290 DDTPDADAVRRDTRSQAQRNHDAFLAALRGLLASGELGQHKGLPVTIVVSTTLKELEAAT 349 Query 304 GAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGC 363 G G+TGGG+ +P+SD+IR+A HANHYLA+FD K LALYHTKRLASPAQRIMLYAKD GC Sbjct 350 GKGVTGGGSRVPMSDLIRMASHANHYLALFDGAKPLALYHTKRLASPAQRIMLYAKDRGC 409 Query 364 SAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWLP 423 S PGCD P Y+ EVHHVTP+ TD+NDLTL CG + L E+GW TRKNAHGDTEWLP Sbjct 410 SRPGCDAPAYHSEVHHVTPWTTTHRTDINDLTLACGPDNRLVEKGWKTRKNAHGDTEWLP 469 Query 424 PPHLDHGQPRVNTFHHPEKLLADDEGD 450 PPHLDHGQPR+N +HHP K+L + + D Sbjct 470 PPHLDHGQPRINRYHHPAKILCEQDDD 496 >gi|15608288|ref|NP_215664.1| hypothetical protein Rv1148c [Mycobacterium tuberculosis H37Rv] gi|31792342|ref|NP_854835.1| hypothetical protein Mb1179c [Mycobacterium bovis AF2122/97] gi|148660935|ref|YP_001282458.1| hypothetical protein MRA_1158 [Mycobacterium tuberculosis H37Ra] 14 more sequence titles Length=482 Score = 545 bits (1405), Expect = 5e-153, Method: Compositional matrix adjust. Identities = 283/447 (64%), Positives = 338/447 (76%), Gaps = 0/447 (0%) Query 4 TREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQ 63 TREEI+ A + +LSRVL L DALTTPE LA L+ E RR+ + EH LINQ+ Q Sbjct 33 TREEISAALDAYHASLSRVLDLKCDALTTPELLACLQRLEVERRRQGAAEHALINQLAGQ 92 Query 64 STEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHG 123 + EEELGG L LA+RL IT EA RR+AEA DLG+RRALTGEPLP LTATA AQR G Sbjct 93 ACEEELGGTLRTALANRLHITPGEASRRIAEAEDLGERRALTGEPLPAQLTATAAAQREG 152 Query 124 LIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDG 183 IG H++ I+AF L + VDL E AE LA+ AT RPD L LA ++MD L+PDG Sbjct 153 KIGREHIKEIQAFFKELSAAVDLGIREAAEAQLAELATSRRPDHLHGLATQLMDWLHPDG 212 Query 184 DYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCV 243 +++D++RAR+RG+T+GKQ+ DGMSR+SG +TPELRATIEAV AKLAAPG CNP+ + P V Sbjct 213 NFSDQERARKRGITMGKQEFDGMSRISGLLTPELRATIEAVLAKLAAPGACNPDDQTPLV 272 Query 244 NGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAA 303 + P + RRDTRS QRNHDA A LR LL SG LGQH GLP +I+V+TTLK+LEAA Sbjct 273 DDTPDADAVRRDTRSQAQRNHDAFLAALRGLLASGELGQHKGLPVTIVVSTTLKELEAAT 332 Query 304 GAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGC 363 G G+TGGG+ +P+SD+IR+A HANHYLA+FD K LALYHTKRLASPAQRIMLYAKD GC Sbjct 333 GKGVTGGGSRVPMSDLIRMASHANHYLALFDGAKPLALYHTKRLASPAQRIMLYAKDRGC 392 Query 364 SAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWLP 423 S PGCD P Y+ EVHHVTP+ TD+NDLTL CG + L E+GW TRKNAHGDTEWLP Sbjct 393 SRPGCDAPAYHSEVHHVTPWTTTHRTDINDLTLACGPDNRLVEKGWKTRKNAHGDTEWLP 452 Query 424 PPHLDHGQPRVNTFHHPEKLLADDEGD 450 PPHLDHGQPR+N +HHP K+L + + D Sbjct 453 PPHLDHGQPRINRYHHPAKILCEQDDD 479 >gi|167969181|ref|ZP_02551458.1| hypothetical protein MtubH3_14595 [Mycobacterium tuberculosis H37Ra] Length=467 Score = 545 bits (1404), Expect = 6e-153, Method: Compositional matrix adjust. Identities = 277/431 (65%), Positives = 328/431 (77%), Gaps = 1/431 (0%) Query 3 STREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGE 62 S+REE AF +L TAL+RVL ++ D LT PE LA+L+ CE RR+LP+ EH IN++ + Sbjct 4 SSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINKLAD 63 Query 63 QSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRH 122 Q+ + ELGGKL LA+RL I+R EA RR+ EAADLG RR LTG+PLPPLLTATA AQR Sbjct 64 QTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAAQRA 123 Query 123 GLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPD 182 G +G HV+VIR F+H+LP VDL T EKAE +LA ++RPDQL KLA ++ DCLNPD Sbjct 124 GHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNPD 183 Query 183 GDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPC 242 G+Y D DRARRR + LG Q DGMS +SGY+TPE RAT++AV AKLAAPGM NP PC Sbjct 184 GNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTPC 243 Query 243 VNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAA 302 + G PS+ DTRS QR+HD L A LR+LL SG LGQHNGLPA+IIV+T+L +L++ Sbjct 244 LAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQSR 303 Query 303 AGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSG 362 AG LTGGGT+LP+SDVIRLA HANHYL IFD G+ LALYHTKRLASP QRI+LYAKD G Sbjct 304 AGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDRG 363 Query 363 CSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAER-GWTTRKNAHGDTEW 421 CS P CDVPGY EVHHVT +AQC+ TD+N+LT GCG HH LA GW TRK G TEW Sbjct 364 CSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGTTEW 423 Query 422 LPPPHLDHGQP 432 LPP HLDHGQP Sbjct 424 LPPAHLDHGQP 434 >gi|167969293|ref|ZP_02551570.1| hypothetical protein MtubH3_15205 [Mycobacterium tuberculosis H37Ra] gi|254231420|ref|ZP_04924747.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|297633692|ref|ZP_06951472.1| hypothetical protein MtubK4_06204 [Mycobacterium tuberculosis KZN 4207] gi|297730679|ref|ZP_06959797.1| hypothetical protein MtubKR_06294 [Mycobacterium tuberculosis KZN R506] gi|61250849|sp|P0A5D9.1|Y1148_MYCTU RecName: Full=Uncharacterized protein Rv1148c/MT1183 gi|61250851|sp|P0A5E0.1|Y1179_MYCBO RecName: Full=Uncharacterized protein Mb1179c gi|124600479|gb|EAY59489.1| conserved hypothetical protein [Mycobacterium tuberculosis C] Length=454 Score = 545 bits (1403), Expect = 7e-153, Method: Compositional matrix adjust. Identities = 283/447 (64%), Positives = 338/447 (76%), Gaps = 0/447 (0%) Query 4 TREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQ 63 TREEI+ A + +LSRVL L DALTTPE LA L+ E RR+ + EH LINQ+ Q Sbjct 5 TREEISAALDAYHASLSRVLDLKCDALTTPELLACLQRLEVERRRQGAAEHALINQLAGQ 64 Query 64 STEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHG 123 + EEELGG L LA+RL IT EA RR+AEA DLG+RRALTGEPLP LTATA AQR G Sbjct 65 ACEEELGGTLRTALANRLHITPGEASRRIAEAEDLGERRALTGEPLPAQLTATAAAQREG 124 Query 124 LIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDG 183 IG H++ I+AF L + VDL E AE LA+ AT RPD L LA ++MD L+PDG Sbjct 125 KIGREHIKEIQAFFKELSAAVDLGIREAAEAQLAELATSRRPDHLHGLATQLMDWLHPDG 184 Query 184 DYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCV 243 +++D++RAR+RG+T+GKQ+ DGMSR+SG +TPELRATIEAV AKLAAPG CNP+ + P V Sbjct 185 NFSDQERARKRGITMGKQEFDGMSRISGLLTPELRATIEAVLAKLAAPGACNPDDQTPLV 244 Query 244 NGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAA 303 + P + RRDTRS QRNHDA A LR LL SG LGQH GLP +I+V+TTLK+LEAA Sbjct 245 DDTPDADAVRRDTRSQAQRNHDAFLAALRGLLASGELGQHKGLPVTIVVSTTLKELEAAT 304 Query 304 GAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGC 363 G G+TGGG+ +P+SD+IR+A HANHYLA+FD K LALYHTKRLASPAQRIMLYAKD GC Sbjct 305 GKGVTGGGSRVPMSDLIRMASHANHYLALFDGAKPLALYHTKRLASPAQRIMLYAKDRGC 364 Query 364 SAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWLP 423 S PGCD P Y+ EVHHVTP+ TD+NDLTL CG + L E+GW TRKNAHGDTEWLP Sbjct 365 SRPGCDAPAYHSEVHHVTPWTTTHRTDINDLTLACGPDNRLVEKGWKTRKNAHGDTEWLP 424 Query 424 PPHLDHGQPRVNTFHHPEKLLADDEGD 450 PPHLDHGQPR+N +HHP K+L + + D Sbjct 425 PPHLDHGQPRINRYHHPAKILCEQDDD 451 >gi|289761293|ref|ZP_06520671.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289708799|gb|EFD72815.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=482 Score = 545 bits (1403), Expect = 8e-153, Method: Compositional matrix adjust. Identities = 283/447 (64%), Positives = 338/447 (76%), Gaps = 0/447 (0%) Query 4 TREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQ 63 TREEI+ A + +LSRVL L DALTTPE LA L+ E RR+ + EH LINQ+ Q Sbjct 33 TREEISAALDAYHASLSRVLDLKCDALTTPELLACLQRLEVERRRQGAAEHALINQLAGQ 92 Query 64 STEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHG 123 + EEELGG L LA+RL IT EA RR+AEA DLG+RRALTGEPLP LTATA AQR G Sbjct 93 ACEEELGGTLRTALANRLHITPGEASRRIAEAEDLGERRALTGEPLPAQLTATAAAQREG 152 Query 124 LIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDG 183 IG H++ I+AF L + VDL E AE LA+ AT RPD L LA ++MD L+PDG Sbjct 153 KIGREHIKEIQAFFKELSAAVDLGIREAAEAQLAELATSRRPDHLHGLATQLMDWLHPDG 212 Query 184 DYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCV 243 +++D++RAR+RG+T+GKQ+ DGMSR+SG +TPELRATIEAV AKLAAPG CNP+ + P V Sbjct 213 NFSDQERARKRGITMGKQEFDGMSRISGLLTPELRATIEAVLAKLAAPGACNPDDQTPVV 272 Query 244 NGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAA 303 + P + RRDTRS QRNHDA A LR LL SG LGQH GLP +I+V+TTLK+LEAA Sbjct 273 DDTPDADAVRRDTRSQAQRNHDAFLAALRGLLASGELGQHKGLPVTIVVSTTLKELEAAT 332 Query 304 GAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGC 363 G G+TGGG+ +P+SD+IR+A HANHYLA+FD K LALYHTKRLASPAQRIMLYAKD GC Sbjct 333 GKGVTGGGSRVPMSDLIRMASHANHYLALFDGAKPLALYHTKRLASPAQRIMLYAKDRGC 392 Query 364 SAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWLP 423 S PGCD P Y+ EVHHVTP+ TD+NDLTL CG + L E+GW TRKNAHGDTEWLP Sbjct 393 SRPGCDAPAYHSEVHHVTPWTTTHRTDINDLTLACGPDNRLVEKGWKTRKNAHGDTEWLP 452 Query 424 PPHLDHGQPRVNTFHHPEKLLADDEGD 450 PPHLDHGQPR+N +HHP K+L + + D Sbjct 453 PPHLDHGQPRINRYHHPAKILCEPDDD 479 >gi|15840590|ref|NP_335627.1| hypothetical protein MT1183 [Mycobacterium tuberculosis CDC1551] gi|13880770|gb|AAK45441.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length=499 Score = 544 bits (1402), Expect = 9e-153, Method: Compositional matrix adjust. Identities = 283/447 (64%), Positives = 337/447 (76%), Gaps = 0/447 (0%) Query 4 TREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQ 63 TREEI+ A + +LSRVL L DALTTPE LA L+ E RR+ + EH LINQ+ Q Sbjct 50 TREEISAALDAYHASLSRVLDLKCDALTTPELLACLQRLEVERRRQGAAEHALINQLAGQ 109 Query 64 STEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHG 123 + EEELGG L LA+RL IT EA RR+AEA DLG+RRALTGEPLP LTATA AQR G Sbjct 110 ACEEELGGTLRTALANRLHITPGEASRRIAEAEDLGERRALTGEPLPAQLTATAAAQREG 169 Query 124 LIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDG 183 IG H++ I+AF L + VDL E AE LA+ AT RPD L LA ++MD L+PDG Sbjct 170 KIGREHIKEIQAFFKELSAAVDLGIREAAEAQLAELATSRRPDHLHGLATQLMDWLHPDG 229 Query 184 DYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCV 243 +++D++RAR+RG+T+GKQ+ DGMSR+SG +TPELRATIEAV AKLAAPG CNP+ + P V Sbjct 230 NFSDQERARKRGITMGKQEFDGMSRISGLLTPELRATIEAVLAKLAAPGACNPDDQTPLV 289 Query 244 NGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAA 303 P + RRDTRS QRNHDA A LR LL SG LGQH GLP +I+V+TTLK+LEAA Sbjct 290 ADTPDADAVRRDTRSQAQRNHDAFLAALRGLLASGELGQHKGLPVTIVVSTTLKELEAAT 349 Query 304 GAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGC 363 G G+TGGG+ +P+SD+IR+A HANHYLA+FD K LALYHTKRLASPAQRIMLYAKD GC Sbjct 350 GKGVTGGGSRVPMSDLIRMASHANHYLALFDGAKPLALYHTKRLASPAQRIMLYAKDRGC 409 Query 364 SAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWLP 423 S PGCD P Y+ EVHHVTP+ TD+NDLTL CG + L E+GW TRKNAHGDTEWLP Sbjct 410 SRPGCDAPAYHSEVHHVTPWTTTHRTDINDLTLACGPDNRLVEKGWKTRKNAHGDTEWLP 469 Query 424 PPHLDHGQPRVNTFHHPEKLLADDEGD 450 PPHLDHGQPR+N +HHP K+L + + D Sbjct 470 PPHLDHGQPRINRYHHPAKILCEQDDD 496 >gi|342861356|ref|ZP_08718004.1| hypothetical protein MCOL_20831 [Mycobacterium colombiense CECT 3035] gi|342131256|gb|EGT84537.1| hypothetical protein MCOL_20831 [Mycobacterium colombiense CECT 3035] Length=429 Score = 544 bits (1401), Expect = 2e-152, Method: Compositional matrix adjust. Identities = 280/427 (66%), Positives = 328/427 (77%), Gaps = 1/427 (0%) Query 25 LTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQSTEEELGGKLGLTLADRLRIT 84 + +AL ++LA+LE CE RR++P++EH LIN + Q +ELG L +A+ I+ Sbjct 1 MNVEALGPRQQLAVLERCERQRRRIPALEHPLINSLARQVPSDELGATLAHAIAEATLIS 60 Query 85 RSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHGLIGDGHVEVIRAFVHRLPSWV 144 RSEA RR+ EA DLG R LTGE +PP L ATA AQR G +G G V VIR F H+LP W+ Sbjct 61 RSEASRRIREARDLGPRHGLTGESVPPTLAATAAAQRDGTLGTGQVAVIRKFYHQLPGWI 120 Query 145 DLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDGDYTDEDRARRRGLTLGKQDVD 204 D+ T E+AE LA + T+YRP+QL KLA + DCLNPDG+Y+DEDRAR RGLTLG Q D Sbjct 121 DMATRERAEAKLATEGTRYRPEQLGKLADLLADCLNPDGNYSDEDRARARGLTLGNQQAD 180 Query 205 GMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCVNGAPSKEQARRDTRSCPQRNH 264 GMS L G++TPE RAT+EAV AKLAAPGMCNP + PCV+GAPS+E RD RS QR+H Sbjct 181 GMSALRGWLTPEARATLEAVLAKLAAPGMCNPLDETPCVDGAPSQEAIERDPRSAAQRSH 240 Query 265 DALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAAGAGLTGGGTILPISDVIRLAR 324 D LNA LR++L SG +GQHNGLPASI+VTTTL+DLEAA G GLTGGGT+LP+SDVIRLAR Sbjct 241 DGLNAALRAVLASGKVGQHNGLPASIVVTTTLQDLEAATGRGLTGGGTLLPMSDVIRLAR 300 Query 325 HANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGCSAPGCDVPGYYCEVHHVTPYA 384 HA+HYLAIFD+GKALALYHTKRLASP QRI+LYAKD GCS PGC VPGYY EVHHVT +A Sbjct 301 HAHHYLAIFDKGKALALYHTKRLASPGQRIVLYAKDRGCSNPGCTVPGYYSEVHHVTDWA 360 Query 385 QCRNTDVNDLTLGCGGHHPLAER-GWTTRKNAHGDTEWLPPPHLDHGQPRVNTFHHPEKL 443 C TDVNDLT CG HH L + GW TRKN DTEW+PPPHLD GQPR NTFHHPEKL Sbjct 361 TCHTTDVNDLTFACGPHHRLLQPGGWMTRKNTKADTEWVPPPHLDRGQPRTNTFHHPEKL 420 Query 444 LADDEGD 450 L D + D Sbjct 421 LHDRDDD 427 >gi|121637850|ref|YP_978073.1| hypothetical protein BCG_1984 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990334|ref|YP_002645021.1| hypothetical protein JTY_1968 [Mycobacterium bovis BCG str. Tokyo 172] gi|121493497|emb|CAL71971.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773447|dbj|BAH26253.1| hypothetical protein JTY_1968 [Mycobacterium bovis BCG str. Tokyo 172] gi|341601877|emb|CCC64551.1| conserved hypothetical protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=454 Score = 543 bits (1400), Expect = 2e-152, Method: Compositional matrix adjust. Identities = 283/447 (64%), Positives = 339/447 (76%), Gaps = 0/447 (0%) Query 4 TREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQ 63 TREEI+ A + +LSRVL L DALTTPE LA L+ E RR+ + EH LINQ+ Q Sbjct 5 TREEISAALDAYHASLSRVLDLKCDALTTPELLACLQRLEVERRRQGAAEHALINQLAGQ 64 Query 64 STEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHG 123 + EEELGG L LA+RL IT EA RR+AEA DLG+RRALTGEPLP LTATA AQR G Sbjct 65 ACEEELGGTLRTALANRLHITPGEASRRIAEAEDLGERRALTGEPLPAQLTATAAAQREG 124 Query 124 LIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDG 183 IG H++ I+AF L + VDL E AE LA+ AT RPD L LA ++MD L+PDG Sbjct 125 KIGREHIKEIQAFFKELSAAVDLGIREAAEAQLAELATSRRPDHLHGLATQLMDWLHPDG 184 Query 184 DYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCV 243 +++D++RAR+RG+T+GKQ+ DGMSR+SG +TPELRATIEAV AKLAAPG CNP+ + P V Sbjct 185 NFSDQERARKRGITMGKQEFDGMSRISGLLTPELRATIEAVLAKLAAPGACNPDDQTPLV 244 Query 244 NGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAA 303 + P + RRDTRS QRNHDA A LR LL SG LGQH GLP +I+V+TTLK+LEAA Sbjct 245 DDTPDADAVRRDTRSQAQRNHDAFLAALRGLLASGELGQHKGLPVTIVVSTTLKELEAAT 304 Query 304 GAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGC 363 G G+TGGG+ +P+SD+IR+A +ANHYLA+FD K LALYHTKRLASPAQRIMLYAKD GC Sbjct 305 GKGVTGGGSRVPMSDLIRMASNANHYLALFDGAKPLALYHTKRLASPAQRIMLYAKDRGC 364 Query 364 SAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWLP 423 S PGCD P Y+ EVHHVTP+ TD+NDLTL CG + L E+GW TRKNAHGDTEWLP Sbjct 365 SRPGCDAPAYHSEVHHVTPWTTTHRTDINDLTLACGPDNRLVEKGWKTRKNAHGDTEWLP 424 Query 424 PPHLDHGQPRVNTFHHPEKLLADDEGD 450 PPHLDHGQPR+N +HHPEK+L + + D Sbjct 425 PPHLDHGQPRINRYHHPEKILCEPDDD 451 >gi|148822364|ref|YP_001287118.1| hypothetical protein TBFG_11173 [Mycobacterium tuberculosis F11] gi|148720891|gb|ABR05516.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] Length=499 Score = 543 bits (1399), Expect = 2e-152, Method: Compositional matrix adjust. Identities = 282/447 (64%), Positives = 338/447 (76%), Gaps = 0/447 (0%) Query 4 TREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQ 63 TREEI+ A + +LSRVL L DALTTPE LA L+ E RR+ + EH LINQ+ Q Sbjct 50 TREEISAALDAYHASLSRVLDLKCDALTTPELLACLQRLEVERRRQGAAEHALINQLAGQ 109 Query 64 STEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHG 123 + EEELGG L LA+RL IT EA RR+AEA DLG+RRALTGEPLP LTATA AQR G Sbjct 110 ACEEELGGTLRTALANRLHITPGEASRRIAEAEDLGERRALTGEPLPAQLTATAAAQREG 169 Query 124 LIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDG 183 IG H++ I+AF L + VDL E AE LA+ AT RPD L LA ++MD L+PDG Sbjct 170 KIGREHIKEIQAFFKELSAAVDLGIREAAEAQLAELATSRRPDHLHGLATQLMDWLHPDG 229 Query 184 DYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCV 243 +++D++RAR+RG+T+GKQ+ DGMSR+SG +TPELRATIEAV AKLAAPG CNP+ + P V Sbjct 230 NFSDQERARKRGITMGKQEFDGMSRISGLLTPELRATIEAVLAKLAAPGACNPDDQTPLV 289 Query 244 NGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAA 303 + P + RRDTRS QRNHDA A LR LL SG LGQH GLP +I+V+TTLK+LEAA Sbjct 290 DDTPDADAVRRDTRSQAQRNHDAFLAALRGLLASGELGQHKGLPVTIVVSTTLKELEAAT 349 Query 304 GAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGC 363 G G+TGGG+ +P+SD+IR+A HA+HYLA+FD K LALYHTKRLASPAQRIMLYAKD GC Sbjct 350 GKGVTGGGSRVPMSDLIRMASHAHHYLALFDGAKPLALYHTKRLASPAQRIMLYAKDRGC 409 Query 364 SAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWLP 423 S PGCD P Y+ EVHHVTP+ TD+NDLTL CG + L E+GW TRKNAHGDTEWLP Sbjct 410 SRPGCDAPAYHSEVHHVTPWTTTHRTDINDLTLACGPDNRLVEKGWKTRKNAHGDTEWLP 469 Query 424 PPHLDHGQPRVNTFHHPEKLLADDEGD 450 PPHLDHGQPR+N +HHP K+L + + D Sbjct 470 PPHLDHGQPRINRYHHPAKILCEQDDD 496 >gi|41407563|ref|NP_960399.1| hypothetical protein MAP1465c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395916|gb|AAS03782.1| hypothetical protein MAP_1465c [Mycobacterium avium subsp. paratuberculosis K-10] Length=484 Score = 543 bits (1399), Expect = 3e-152, Method: Compositional matrix adjust. Identities = 297/455 (66%), Positives = 339/455 (75%), Gaps = 12/455 (2%) Query 2 CSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIG 61 CS+REEI + F +L A+ R+ L+FDALT E L+LL+ CET RR+LP EH LIN + Sbjct 3 CSSREEIVKVFDALDAAVDRLGELSFDALTPRECLSLLQRCETVRRRLPVPEHPLINALA 62 Query 62 EQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQR 121 ++ ELGG+L +A+ I+R+EA RRV AADLG R LTGEPLPPLL ATA AQR Sbjct 63 RDASPAELGGRLSHAIAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAAAQR 122 Query 122 HGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNP 181 GL+G V VIR F H+LP W+D T E+AE DLA Q QYRP+QLA LA + DCLNP Sbjct 123 AGLLGLEQVAVIRKFCHQLPGWIDQATRERAETDLANQGGQYRPEQLAALAGTLADCLNP 182 Query 182 DGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAP 241 DG Y DEDRARRR LTLG Q DGMS L G+++PELRAT+EAV AKLAAPGMCN ++P Sbjct 183 DGLYRDEDRARRRSLTLGNQQADGMSELRGWLSPELRATLEAVLAKLAAPGMCNSLDESP 242 Query 242 CVNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEA 301 CV G PS+ D RS QRNHD L A LR+LL SGNLGQHNGLPASIIVTTTL DLE Sbjct 243 CVEGTPSQHAIDGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLET 302 Query 302 AAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALA-LYHTKRLASPAQRIMLYAKD 360 AAG LTGGGT+LP+SDVIRL+RHA+HYLAIFD+GKALA LYHTKRLASPAQRI+LYAKD Sbjct 303 AAGRRLTGGGTLLPMSDVIRLSRHAHHYLAIFDQGKALALLYHTKRLASPAQRIVLYAKD 362 Query 361 S----------GCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERG-W 409 GC+APGC VPGYY EVHH T YA C TD+NDLT CG HH L + G W Sbjct 363 RGCTAPGCTAPGCTAPGCTVPGYYSEVHHCTDYATCHTTDINDLTFACGPHHRLLQPGAW 422 Query 410 TTRKNAHGDTEWLPPPHLDHGQPRVNTFHHPEKLL 444 TT KNA G+TEW+PPPHLD QPR NTFHHPEKLL Sbjct 423 TTHKNAKGETEWIPPPHLDRNQPRTNTFHHPEKLL 457 >gi|121637080|ref|YP_977303.1| hypothetical protein BCG_1209c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989553|ref|YP_002644240.1| hypothetical protein JTY_1182 [Mycobacterium bovis BCG str. Tokyo 172] gi|121492727|emb|CAL71196.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772666|dbj|BAH25472.1| hypothetical protein JTY_1182 [Mycobacterium bovis BCG str. Tokyo 172] gi|341601096|emb|CCC63768.1| conserved hypothetical protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=482 Score = 543 bits (1398), Expect = 3e-152, Method: Compositional matrix adjust. Identities = 282/447 (64%), Positives = 338/447 (76%), Gaps = 0/447 (0%) Query 4 TREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQ 63 TREEI+ A + +LSRVL L DALTTPE LA L+ E RR+ + EH LINQ+ Q Sbjct 33 TREEISAALDAYHASLSRVLDLKCDALTTPELLACLQRLEVERRRQGAAEHALINQLAGQ 92 Query 64 STEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHG 123 + EEELGG L LA+RL IT EA RR+AEA DLG+RRALTGEPLP LTATA AQR G Sbjct 93 ACEEELGGTLRTALANRLHITPGEASRRIAEAEDLGERRALTGEPLPAQLTATAAAQREG 152 Query 124 LIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDG 183 IG H++ I+AF L + VDL E AE LA+ AT RPD L LA ++MD L+PDG Sbjct 153 KIGREHIKEIQAFFKELSAAVDLGIREAAEAQLAELATSRRPDHLHGLATQLMDWLHPDG 212 Query 184 DYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCV 243 +++D++RAR+RG+T+GKQ+ DGMSR+SG +TPELRATIEAV AKLAAPG CNP+ + P V Sbjct 213 NFSDQERARKRGITMGKQEFDGMSRISGLLTPELRATIEAVLAKLAAPGACNPDDQTPLV 272 Query 244 NGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAA 303 + P + RRDTRS QRNHDA A LR LL SG LGQH GLP +I+V+TTLK+LEAA Sbjct 273 DDTPDADAVRRDTRSQAQRNHDAFLAALRGLLASGELGQHKGLPVTIVVSTTLKELEAAT 332 Query 304 GAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGC 363 G G+TGGG+ +P+SD+IR+A +ANHYLA+FD K LALYHTKRLASPAQRIMLYAKD GC Sbjct 333 GKGVTGGGSRVPMSDLIRMASNANHYLALFDGAKPLALYHTKRLASPAQRIMLYAKDRGC 392 Query 364 SAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWLP 423 S PGCD P Y+ EVHHVTP+ TD+NDLTL CG + L E+GW TRKNAHGDTEWLP Sbjct 393 SRPGCDAPAYHSEVHHVTPWTTTHRTDINDLTLACGPDNRLVEKGWKTRKNAHGDTEWLP 452 Query 424 PPHLDHGQPRVNTFHHPEKLLADDEGD 450 PPHLDHGQPR+N +HHP K+L + + D Sbjct 453 PPHLDHGQPRINRYHHPAKILCEQDDD 479 >gi|240171017|ref|ZP_04749676.1| hypothetical protein MkanA1_17025 [Mycobacterium kansasii ATCC 12478] Length=471 Score = 542 bits (1397), Expect = 4e-152, Method: Compositional matrix adjust. Identities = 274/421 (66%), Positives = 319/421 (76%), Gaps = 0/421 (0%) Query 5 REEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQS 64 RE +T A +L A+ R++ L FDALTTPE LAL+E CE RR+LP EH LIN + Q+ Sbjct 9 RETVTAALDALDAAVDRLVELNFDALTTPEWLALVERCEKVRRRLPVAEHQLINHLARQA 68 Query 65 TEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHGL 124 + EELGGKL +AD I+R+EA RR+ AADLG RR LTGEP+ P+L A AQR G Sbjct 69 SAEELGGKLSHAIADWALISRTEAARRIKAAADLGPRRGLTGEPIAPVLAGAAAAQRDGK 128 Query 125 IGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDGD 184 +G ++VIR F H+LP+W+D T E+AE LA+Q +Q+RP+QLA LAA I DCLNPDG Sbjct 129 LGGESIQVIRRFYHQLPAWIDQATRERAEAQLARQGSQFRPEQLAGLAATIADCLNPDGI 188 Query 185 YTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCVN 244 Y DEDRARRRGLTLG Q DGMS L G +TPELRAT+EAV AKLAAPGM NPE + V+ Sbjct 189 YRDEDRARRRGLTLGNQQSDGMSELRGLITPELRATLEAVLAKLAAPGMGNPESQTLSVD 248 Query 245 GAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAAG 304 G PS+E DTRS PQRNHDAL A LR+LL SG LG+HNGLPASIIVTTTL +LEAAAG Sbjct 249 GTPSQEAIDTDTRSAPQRNHDALTAGLRALLASGELGRHNGLPASIIVTTTLAELEAAAG 308 Query 305 AGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGCS 364 GLTG GTILP+SDVIRLARHA HYLA+FD+GKALALYH+KRLA+P QRI+LYA+D GCS Sbjct 309 QGLTGAGTILPMSDVIRLARHARHYLAVFDKGKALALYHSKRLAAPGQRIVLYARDRGCS 368 Query 365 APGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWLPP 424 A GCDV GY+CEVHHV PYAQ TDVN LT C GHHP A++GWTTRKN P Sbjct 369 ASGCDVTGYFCEVHHVVPYAQSPTTDVNQLTFACSGHHPPADKGWTTRKNTTATANGHPH 428 Query 425 P 425 P Sbjct 429 P 429 >gi|339631213|ref|YP_004722855.1| hypothetical protein MAF_11650 [Mycobacterium africanum GM041182] gi|339330569|emb|CCC26237.1| conserved hypothetical protein [Mycobacterium africanum GM041182] Length=482 Score = 542 bits (1397), Expect = 4e-152, Method: Compositional matrix adjust. Identities = 282/447 (64%), Positives = 337/447 (76%), Gaps = 0/447 (0%) Query 4 TREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQ 63 TREEI+ A + +LSRVL L DALTTPE LA L+ E RR+ + EH LINQ+ Q Sbjct 33 TREEISAALDAYHASLSRVLDLKCDALTTPELLACLQRLEVERRRQGAAEHALINQLAGQ 92 Query 64 STEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHG 123 + EEELGG L LA+RL IT EA RR+AEA DLG+RRALTGEPLP LTATA AQR G Sbjct 93 ACEEELGGTLRTALANRLHITPGEASRRIAEAEDLGERRALTGEPLPAQLTATAAAQREG 152 Query 124 LIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDG 183 IG H++ I+AF L + VDL E AE LA+ AT RPD L LA ++MD L+PDG Sbjct 153 KIGREHIKEIQAFFKELSAAVDLGIREAAEAQLAELATSRRPDHLHGLATQLMDWLHPDG 212 Query 184 DYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCV 243 +++D++RAR+RG+T+GKQ+ DGMSR+SG +TPELRATIEAV AKLAAPG CNP+ + P V Sbjct 213 NFSDQERARKRGITMGKQEFDGMSRISGLLTPELRATIEAVLAKLAAPGACNPDDQTPLV 272 Query 244 NGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAA 303 + P + RRDTRS QRNHDA A LR LL SG LGQH GLP +I+V+TTLK+LEAA Sbjct 273 DDTPDADAVRRDTRSQAQRNHDAFLAALRGLLASGELGQHKGLPVTIVVSTTLKELEAAT 332 Query 304 GAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGC 363 G G+TGGG+ +P+SD+IR+A HANHYLA+FD K LALYHTKRLASPAQRIMLYAKD GC Sbjct 333 GKGVTGGGSRVPMSDLIRMASHANHYLALFDGAKPLALYHTKRLASPAQRIMLYAKDRGC 392 Query 364 SAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWLP 423 S PGCD P Y+ EVHHVTP+ TD+NDLTL CG + L E+GW TRKNA GDTEWLP Sbjct 393 SRPGCDAPAYHSEVHHVTPWTTTHRTDINDLTLACGPDNRLVEKGWKTRKNAKGDTEWLP 452 Query 424 PPHLDHGQPRVNTFHHPEKLLADDEGD 450 PPHLDHGQPR+N +HHP K+L + + D Sbjct 453 PPHLDHGQPRINRYHHPAKILCEQDDD 479 >gi|289573806|ref|ZP_06454033.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289538237|gb|EFD42815.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] Length=482 Score = 540 bits (1391), Expect = 2e-151, Method: Compositional matrix adjust. Identities = 281/447 (63%), Positives = 337/447 (76%), Gaps = 0/447 (0%) Query 4 TREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQ 63 TREEI+ A + +LSRVL L DALTTPE LA L+ E RR+ + EH LINQ+ Q Sbjct 33 TREEISAALDAYHASLSRVLDLKCDALTTPELLACLQRLEVERRRQGAAEHALINQLAGQ 92 Query 64 STEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHG 123 + EEELGG L LA+RL IT EA RR+AEA DLG+RRALTGEPLP LTATA AQR G Sbjct 93 ACEEELGGTLRTALANRLHITPGEASRRIAEAEDLGERRALTGEPLPAQLTATAAAQREG 152 Query 124 LIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDG 183 IG H++ I+AF L + VDL E AE LA+ AT RPD L LA ++MD L+PDG Sbjct 153 KIGREHIKEIQAFFKELSAAVDLGIREAAEAQLAELATSRRPDHLHGLATQLMDWLHPDG 212 Query 184 DYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCV 243 +++D++RAR+RG+T+GKQ+ DGMSR+SG +TPELRATIEAV AKLAAPG CNP+ + P V Sbjct 213 NFSDQERARKRGITMGKQEFDGMSRISGLLTPELRATIEAVLAKLAAPGACNPDDQTPLV 272 Query 244 NGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAA 303 + P + RRDTRS QRNHDA A LR LL SG LGQH GLP +I+V+TTLK+LEAA Sbjct 273 DDTPDADAVRRDTRSQAQRNHDAFLAALRGLLASGELGQHKGLPVTIVVSTTLKELEAAT 332 Query 304 GAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGC 363 G G+TGGG+ +P+SD+IR+A HA+HYLA+FD K LALYHTKRLASPAQRIMLYAKD GC Sbjct 333 GKGVTGGGSRVPMSDLIRMASHAHHYLALFDGAKPLALYHTKRLASPAQRIMLYAKDRGC 392 Query 364 SAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWLP 423 S PGCD P Y+ EVHHVTP+ TD+NDLTL CG + L E+GW TRKNA GDTEWLP Sbjct 393 SRPGCDAPAYHSEVHHVTPWTTTHRTDINDLTLACGPDNRLVEKGWKTRKNAKGDTEWLP 452 Query 424 PPHLDHGQPRVNTFHHPEKLLADDEGD 450 PPHLDHGQPR+N +HHP K+L + + D Sbjct 453 PPHLDHGQPRINRYHHPAKILCEQDDD 479 >gi|41407717|ref|NP_960553.1| hypothetical protein MAP1619 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396070|gb|AAS03936.1| hypothetical protein MAP_1619 [Mycobacterium avium subsp. paratuberculosis K-10] Length=469 Score = 538 bits (1386), Expect = 7e-151, Method: Compositional matrix adjust. Identities = 289/446 (65%), Positives = 338/446 (76%), Gaps = 0/446 (0%) Query 5 REEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQS 64 RE+I + + L ++R+ ++DALT ER+ LLE E R+L H LINQI + + Sbjct 7 REDIQDDYDVLRAVVARIQRHSYDALTNSERIRLLEVLEHQTRRLQVPGHQLINQIEQDA 66 Query 65 TEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHGL 124 T E+GGKL LADRL ITR+EA RR+ +A DLG RR LTGEPLPP ATA AQR G Sbjct 67 TPAEIGGKLAHLLADRLLITRAEAARRIDDARDLGVRRTLTGEPLPPRYAATAAAQRDGR 126 Query 125 IGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDGD 184 IG HV VIR F +LP WVD T + AE DLA+ A ++RP+ L K+A RI LNPDG Sbjct 127 IGASHVAVIRRFFDQLPCWVDAPTRDAAEADLARWAGEHRPESLRKVADRIACYLNPDGV 186 Query 185 YTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCVN 244 + DEDR R RGLTLG Q DGMS+L G++TPE RATIEAV AKLAA GMCNP+ AP V+ Sbjct 187 FHDEDRLRHRGLTLGAQQPDGMSQLRGWLTPEARATIEAVLAKLAAAGMCNPDDPAPVVD 246 Query 245 GAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAAG 304 G P +E +RD+RS QRNHD LNA LR+LL G LGQHNGLPASIIVTTTL+DLE+AAG Sbjct 247 GQPGQEAIQRDSRSAAQRNHDGLNAALRALLAGGKLGQHNGLPASIIVTTTLRDLESAAG 306 Query 305 AGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGCS 364 GLTGGGT+LP+SDVIRLARHA+HYLA+FD GK LALYHTKRLASP QRI+LYAKD GCS Sbjct 307 KGLTGGGTLLPMSDVIRLARHAHHYLAVFDNGKPLALYHTKRLASPGQRIVLYAKDRGCS 366 Query 365 APGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWLPP 424 PGCDV GY CEVHHVT YA+C TD++ LT CGGHHPLAE+GW TRKN G+TEW+PP Sbjct 367 HPGCDVSGYSCEVHHVTGYAKCGRTDIDQLTFACGGHHPLAEQGWITRKNGRGETEWIPP 426 Query 425 PHLDHGQPRVNTFHHPEKLLADDEGD 450 PHLDHG+PR N FHHPEKL+AD + D Sbjct 427 PHLDHGRPRTNAFHHPEKLVADSDND 452 >gi|342861192|ref|ZP_08717841.1| hypothetical protein MCOL_20012 [Mycobacterium colombiense CECT 3035] gi|342131636|gb|EGT84906.1| hypothetical protein MCOL_20012 [Mycobacterium colombiense CECT 3035] Length=453 Score = 538 bits (1386), Expect = 8e-151, Method: Compositional matrix adjust. Identities = 294/449 (66%), Positives = 344/449 (77%), Gaps = 1/449 (0%) Query 3 STREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGE 62 S ++++ E F +L A R+ L DAL ++LA+L+ CE RR+LP+VEH LIN + Sbjct 2 SDQQDVDEVFDALDAAWDRLCALKLDALNPRQQLAVLQRCEQQRRRLPAVEHPLINSLAR 61 Query 63 QSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRH 122 QS EELGG + + + I+R+EA RR+ EA DLG R LTGEPLPPLL ATA AQR Sbjct 62 QSPSEELGGTVVHAITEATLISRAEASRRIKEARDLGPRHGLTGEPLPPLLAATAAAQRA 121 Query 123 GLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPD 182 G +G G V VIR F H+LP W+D+ T E+ E LAK+ +++RP+QLA LA+ + DCLNPD Sbjct 122 GTLGSGQVSVIRKFFHQLPGWIDMPTREQVEARLAKEGSRFRPEQLAALASTVADCLNPD 181 Query 183 GDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPC 242 G +TDEDRAR RGLTLG Q DGMS L G++TPE RAT+EAV AKLAAPGMCNP + PC Sbjct 182 GTFTDEDRARGRGLTLGNQQADGMSALRGWLTPEARATLEAVLAKLAAPGMCNPFDETPC 241 Query 243 VNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAA 302 V+GAP++E RD RS QRNHDALNA LR+LL SG LGQHNGLPASI+VTTTL++LE+A Sbjct 242 VDGAPTEEAIERDPRSAAQRNHDALNAALRALLASGELGQHNGLPASIVVTTTLQELESA 301 Query 303 AGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSG 362 AG GLTGGGT+LP+SDVIRLARHA HYLAIFD+GKALALYHTKRLASP QRI+LYAKD G Sbjct 302 AGRGLTGGGTLLPMSDVIRLARHARHYLAIFDKGKALALYHTKRLASPGQRIVLYAKDRG 361 Query 363 CSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAE-RGWTTRKNAHGDTEW 421 CS PGC VPGYY EVHHVT +A C TDVNDLT CG HH L GWTTRKN GDTEW Sbjct 362 CSNPGCTVPGYYSEVHHVTDWATCHTTDVNDLTFACGPHHRLLRPGGWTTRKNTRGDTEW 421 Query 422 LPPPHLDHGQPRVNTFHHPEKLLADDEGD 450 PPPHLD GQPR NTFHHPEKLL D + D Sbjct 422 KPPPHLDRGQPRTNTFHHPEKLLRDGDDD 450 >gi|118466658|ref|YP_882229.1| hypothetical protein MAV_3043 [Mycobacterium avium 104] gi|118167945|gb|ABK68842.1| conserved hypothetical protein [Mycobacterium avium 104] Length=447 Score = 537 bits (1384), Expect = 1e-150, Method: Compositional matrix adjust. Identities = 288/444 (65%), Positives = 334/444 (76%), Gaps = 1/444 (0%) Query 8 ITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQSTEE 67 ++ AF ++ AL +L + AL T E+LALL CE RR+LP++EH LIN + ++ Sbjct 1 MSAAFDAIDAALDDLLDCDYAALATREKLALLNRCERLRRRLPAIEHPLINALARDASPA 60 Query 68 ELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHGLIGD 127 ELGG+L +A+ I+R+EA RRV AADLG R LTGEPLPPLL ATA QR G +G Sbjct 61 ELGGRLSHAIAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAARQREGSLGL 120 Query 128 GHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDGDYTD 187 V VIR F H+LP W+D T E+AE DLA++ T+YRP+QLA LA + DCLNPDG Y D Sbjct 121 EQVAVIRKFCHQLPGWIDQATRERAEADLAREGTRYRPEQLAALAGTLADCLNPDGLYRD 180 Query 188 EDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCVNGAP 247 EDRARRR LTLG Q DGMS L G+++PELRAT+EAV AKLAAPGMCNP ++PCV G P Sbjct 181 EDRARRRSLTLGNQHADGMSELRGWLSPELRATLEAVLAKLAAPGMCNPLDESPCVEGTP 240 Query 248 SKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAAGAGL 307 S+ D RS QRNHD L A LR+LL SGNLGQHNGLPASIIVTTTL DLEAAAG GL Sbjct 241 SQTAIEGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLEAAAGRGL 300 Query 308 TGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGCSAPG 367 TGGGT+LP+SDVIRL+RHA HYLAIFD GKALALYHTKRLASP QRI+LYAKD GC+APG Sbjct 301 TGGGTLLPMSDVIRLSRHARHYLAIFDHGKALALYHTKRLASPGQRIVLYAKDRGCTAPG 360 Query 368 CDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERG-WTTRKNAHGDTEWLPPPH 426 C VPGYY EVHH T YA C TD+NDLT CG HH L + G WTT KNA G+TEW+PPPH Sbjct 361 CTVPGYYSEVHHCTDYATCHTTDINDLTFACGPHHRLLQPGAWTTHKNAKGETEWIPPPH 420 Query 427 LDHGQPRVNTFHHPEKLLADDEGD 450 LD QPR N FHHPEKLL ++ D Sbjct 421 LDRNQPRTNAFHHPEKLLQGEDDD 444 >gi|118464750|ref|YP_883326.1| hypothetical protein MAV_4180 [Mycobacterium avium 104] gi|118166037|gb|ABK66934.1| conserved hypothetical protein [Mycobacterium avium 104] Length=462 Score = 536 bits (1381), Expect = 2e-150, Method: Compositional matrix adjust. Identities = 293/445 (66%), Positives = 339/445 (77%), Gaps = 1/445 (0%) Query 1 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI 60 M S RE ++ AF + AL +L + L T E+LALL CE RR+LP+VEH LIN + Sbjct 1 MSSDREAVSAAFDVIDAALDDLLDCDYAVLATREKLALLNRCEKLRRRLPAVEHPLINAL 60 Query 61 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ 120 ++ ELGG+L +A+ I+R+EA RRV AADLG R LTGEPLPP+L ATA AQ Sbjct 61 ARDASPAELGGRLSHAIAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPVLAATAAAQ 120 Query 121 RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN 180 R G +G V VIR F H+LP W+D T E+AE DLA++ T+YRP+QLA LA + DCLN Sbjct 121 RAGSLGPEQVAVIRKFCHQLPGWIDQATRERAETDLAREGTRYRPEQLAALAGTLADCLN 180 Query 181 PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA 240 PDG Y DEDRARRR LTLG Q DGMS L G +TPELRAT+EAV AKLAAPGMCNP ++ Sbjct 181 PDGLYRDEDRARRRSLTLGNQHADGMSELRGLLTPELRATLEAVLAKLAAPGMCNPLDES 240 Query 241 PCVNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLE 300 PCV+G P+++ DTRS QRNHD L A LR+LL SGNLGQHNGLPASIIVTTTL DL+ Sbjct 241 PCVDGTPTEQAIEGDTRSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLQ 300 Query 301 AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKD 360 AAAG GLTGGGT+LP+SDVIRL+RHA+HYLAIFD GKALALYHTKRLASPAQRI+LYAKD Sbjct 301 AAAGKGLTGGGTLLPMSDVIRLSRHAHHYLAIFDHGKALALYHTKRLASPAQRIVLYAKD 360 Query 361 SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERG-WTTRKNAHGDT 419 GC+APGC VPGYY EVHH T YA C TD+NDLT CG HH L + G WTT KNA G+T Sbjct 361 RGCTAPGCTVPGYYAEVHHCTDYATCHTTDINDLTFACGPHHRLLQPGAWTTHKNARGET 420 Query 420 EWLPPPHLDHGQPRVNTFHHPEKLL 444 +WLPPPHLD QPR NTFHHPEKLL Sbjct 421 QWLPPPHLDRNQPRTNTFHHPEKLL 445 >gi|118465560|ref|YP_882185.1| hypothetical protein MAV_2999 [Mycobacterium avium 104] gi|118166847|gb|ABK67744.1| conserved hypothetical protein [Mycobacterium avium 104] Length=465 Score = 534 bits (1375), Expect = 1e-149, Method: Compositional matrix adjust. Identities = 295/445 (67%), Positives = 339/445 (77%), Gaps = 1/445 (0%) Query 1 MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI 60 M S RE ++ AF ++ AL +L + AL T E+LALL CE RR+LP++EH LIN + Sbjct 4 MSSDREAVSAAFDAIDAALDDLLDCDYAALATREKLALLNRCERLRRRLPAIEHPLINAL 63 Query 61 GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ 120 +T ELGG+L +A+ I+R+EA RRV AADLG R LTGEPLPPLL ATA AQ Sbjct 64 ARDATPAELGGRLSHAIAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAAAQ 123 Query 121 RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN 180 R G +G V VIR F H+LP W+D T E+AE DLA Q T+YRP+QLA LA + DCLN Sbjct 124 REGSLGLEQVAVIRKFCHQLPGWIDQATRERAEADLANQGTRYRPEQLAALAGTLADCLN 183 Query 181 PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA 240 PDG Y DEDRARRR LTLG Q DGMS L G +TPELRAT+EAV AKLAAPGMCNP ++ Sbjct 184 PDGLYRDEDRARRRSLTLGNQHADGMSELRGLLTPELRATLEAVLAKLAAPGMCNPLDES 243 Query 241 PCVNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLE 300 PCV+G P+++ DTRS QRNHD L A LR+LL SGNLGQHNGLPASIIVTTTL DLE Sbjct 244 PCVDGTPTEQAIEGDTRSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLE 303 Query 301 AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKD 360 AAG GLTGGGT+LP+SDVIRL+RHA+HYLAIFD+GKALALYHTKRLASP QRI+LYAKD Sbjct 304 TAAGKGLTGGGTLLPMSDVIRLSRHAHHYLAIFDKGKALALYHTKRLASPGQRIVLYAKD 363 Query 361 SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERG-WTTRKNAHGDT 419 GC+APGC VPGYY EVHH T YA C TD+NDLT CG HH L + G WTT KNA G+T Sbjct 364 RGCTAPGCTVPGYYAEVHHCTDYATCHTTDINDLTFACGPHHRLLQPGAWTTHKNARGET 423 Query 420 EWLPPPHLDHGQPRVNTFHHPEKLL 444 +WLPPPHLD QPR NTFHHPEKLL Sbjct 424 QWLPPPHLDRNQPRTNTFHHPEKLL 448 >gi|118464547|ref|YP_880668.1| hypothetical protein MAV_1426 [Mycobacterium avium 104] gi|118165834|gb|ABK66731.1| conserved hypothetical protein [Mycobacterium avium 104] Length=472 Score = 534 bits (1375), Expect = 2e-149, Method: Compositional matrix adjust. Identities = 297/447 (67%), Positives = 341/447 (77%), Gaps = 1/447 (0%) Query 5 REEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQS 64 R+ I+ AF +L AL V L FD LT E LALL CE ARR+LP EH LIN + Q+ Sbjct 9 RDAISAAFDALDAALDGVAALGFDGLTPRECLALLGRCEKARRRLPVAEHQLINLVARQA 68 Query 65 TEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHGL 124 + ELGG+L +A+ I+R+EA RRV AADLG R LTGEPLPP+L ATA AQR G Sbjct 69 SPAELGGRLSHAIAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPVLAATAAAQRAGS 128 Query 125 IGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDGD 184 +G V VIR F H+LP W+D T E+AE DLA++ T+YRP+QLA LA + DCLNPDG Sbjct 129 LGPEQVAVIRKFCHQLPGWIDQATRERAETDLAREGTRYRPEQLAALAGTLADCLNPDGL 188 Query 185 YTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCVN 244 Y DEDRARRR LTLG Q DGMS L G+++PELRAT+EAV AKLAAPGMCNP ++PCV+ Sbjct 189 YRDEDRARRRSLTLGNQHADGMSELRGWLSPELRATLEAVLAKLAAPGMCNPLDESPCVD 248 Query 245 GAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAAG 304 G P+++ DTRS QRNHD L A LR+LL SGNLGQHNGLPASIIVTTTL DLE AAG Sbjct 249 GTPTEQAIEGDTRSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLETAAG 308 Query 305 AGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGCS 364 GLTGGGT+LPISDVIRL+RHA+HYLAIFD GKALALYHTKRLASPAQRI+LYAKD GC+ Sbjct 309 KGLTGGGTLLPISDVIRLSRHAHHYLAIFDHGKALALYHTKRLASPAQRIVLYAKDRGCT 368 Query 365 APGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERG-WTTRKNAHGDTEWLP 423 APGC VPGYY EVHH T YA C TD+NDLT CG HH L + G WTT KNA G+T+WLP Sbjct 369 APGCTVPGYYAEVHHCTDYATCHTTDINDLTFACGPHHRLLQPGAWTTHKNAKGETQWLP 428 Query 424 PPHLDHGQPRVNTFHHPEKLLADDEGD 450 PPHLD QPR NTFHHPEKLL + G+ Sbjct 429 PPHLDRNQPRTNTFHHPEKLLRGEYGE 455 Lambda K H 0.317 0.134 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 936947369512 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40