BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1132 Length=576 Score E Sequences producing significant alignments: (Bits) Value gi|15840570|ref|NP_335607.1| hypothetical protein MT1164 [Mycoba... 1169 0.0 gi|15608272|ref|NP_215648.1| hypothetical protein Rv1132 [Mycoba... 1169 0.0 gi|306781798|ref|ZP_07420135.1| conserved membrane protein [Myco... 1168 0.0 gi|340626144|ref|YP_004744596.1| hypothetical protein MCAN_11411... 1168 0.0 gi|289446722|ref|ZP_06436466.1| conserved membrane protein [Myco... 1167 0.0 gi|31792326|ref|NP_854819.1| hypothetical protein Mb1163 [Mycoba... 1167 0.0 gi|289442562|ref|ZP_06432306.1| conserved membrane protein [Myco... 1166 0.0 gi|254550130|ref|ZP_05140577.1| hypothetical protein Mtube_06679... 1136 0.0 gi|167969269|ref|ZP_02551546.1| hypothetical protein MtubH3_1506... 1070 0.0 gi|118616036|ref|YP_904368.1| hypothetical protein MUL_0139 [Myc... 1014 0.0 gi|183984300|ref|YP_001852591.1| hypothetical protein MMAR_4329 ... 1013 0.0 gi|240170232|ref|ZP_04748891.1| hypothetical protein MkanA1_1302... 987 0.0 gi|296170006|ref|ZP_06851611.1| conserved hypothetical protein [... 931 0.0 gi|254823169|ref|ZP_05228170.1| hypothetical protein MintA_24789... 925 0.0 gi|342861729|ref|ZP_08718375.1| hypothetical protein MCOL_22686 ... 904 0.0 gi|336458750|gb|EGO37710.1| Transmembrane protein of unknown fun... 896 0.0 gi|41408760|ref|NP_961596.1| hypothetical protein MAP2662c [Myco... 895 0.0 gi|118464709|ref|YP_880506.1| hypothetical protein MAV_1261 [Myc... 894 0.0 gi|254774138|ref|ZP_05215654.1| hypothetical protein MaviaA2_056... 892 0.0 gi|145222701|ref|YP_001133379.1| hypothetical protein Mflv_2113 ... 882 0.0 gi|120405543|ref|YP_955372.1| hypothetical protein Mvan_4591 [My... 879 0.0 gi|333989724|ref|YP_004522338.1| hypothetical protein JDM601_108... 876 0.0 gi|108801046|ref|YP_641243.1| hypothetical protein Mmcs_4082 [My... 862 0.0 gi|169631626|ref|YP_001705275.1| hypothetical protein MAB_4552 [... 861 0.0 gi|126436883|ref|YP_001072574.1| hypothetical protein Mjls_4312 ... 860 0.0 gi|315443165|ref|YP_004076044.1| hypothetical protein Mspyr1_153... 855 0.0 gi|118472311|ref|YP_889448.1| hypothetical protein MSMEG_5202 [M... 847 0.0 gi|343926347|ref|ZP_08765852.1| hypothetical protein GOALK_060_0... 830 0.0 gi|183983926|ref|YP_001852217.1| hypothetical protein MMAR_3954 ... 766 0.0 gi|41408425|ref|NP_961261.1| hypothetical protein MAP2327 [Mycob... 763 0.0 gi|296170413|ref|ZP_06852001.1| conserved hypothetical protein [... 763 0.0 gi|254774483|ref|ZP_05215999.1| hypothetical protein MaviaA2_074... 762 0.0 gi|254823134|ref|ZP_05228135.1| hypothetical protein MintA_24610... 761 0.0 gi|118462498|ref|YP_880889.1| hypothetical protein MAV_1654 [Myc... 761 0.0 gi|336461001|gb|EGO39881.1| Transmembrane protein of unknown fun... 761 0.0 gi|118619046|ref|YP_907378.1| hypothetical protein MUL_3809 [Myc... 746 0.0 gi|289569128|ref|ZP_06449355.1| conserved membrane protein [Myco... 690 0.0 gi|29827886|ref|NP_822520.1| hypothetical protein SAV_1345 [Stre... 553 2e-155 gi|311744358|ref|ZP_07718160.1| conserved hypothetical protein [... 541 2e-151 gi|296170702|ref|ZP_06852277.1| conserved hypothetical protein [... 525 1e-146 gi|342858726|ref|ZP_08715381.1| hypothetical protein MCOL_07611 ... 523 4e-146 gi|254775788|ref|ZP_05217304.1| hypothetical protein MaviaA2_141... 522 6e-146 gi|240171802|ref|ZP_04750461.1| hypothetical protein MkanA1_2098... 519 5e-145 gi|118464229|ref|YP_882525.1| hypothetical protein MAV_3343 [Myc... 519 5e-145 gi|41407260|ref|NP_960096.1| hypothetical protein MAP1162 [Mycob... 519 7e-145 gi|254818397|ref|ZP_05223398.1| hypothetical protein MintA_00642... 513 4e-143 gi|183982249|ref|YP_001850540.1| hypothetical protein MMAR_2236 ... 509 4e-142 gi|340626445|ref|YP_004744897.1| hypothetical protein MCAN_14471... 499 5e-139 gi|31792625|ref|NP_855118.1| hypothetical protein Mb1466 [Mycoba... 496 4e-138 gi|289442876|ref|ZP_06432620.1| conserved membrane protein [Myco... 496 6e-138 >gi|15840570|ref|NP_335607.1| hypothetical protein MT1164 [Mycobacterium tuberculosis CDC1551] gi|13880749|gb|AAK45421.1| hypothetical protein MT1164 [Mycobacterium tuberculosis CDC1551] Length=593 Score = 1169 bits (3025), Expect = 0.0, Method: Compositional matrix adjust. Identities = 576/576 (100%), Positives = 576/576 (100%), Gaps = 0/576 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL Sbjct 18 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 77 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW Sbjct 78 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 137 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL Sbjct 138 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 197 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW Sbjct 198 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 257 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE Sbjct 258 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 317 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL Sbjct 318 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 377 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI Sbjct 378 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 437 Query 421 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY 480 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY Sbjct 438 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY 497 Query 481 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR 540 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR Sbjct 498 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR 557 Query 541 LVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG 576 LVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG Sbjct 558 LVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG 593 >gi|15608272|ref|NP_215648.1| hypothetical protein Rv1132 [Mycobacterium tuberculosis H37Rv] gi|121637064|ref|YP_977287.1| hypothetical protein BCG_1193 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660918|ref|YP_001282441.1| hypothetical protein MRA_1141 [Mycobacterium tuberculosis H37Ra] 46 more sequence titles Length=576 Score = 1169 bits (3024), Expect = 0.0, Method: Compositional matrix adjust. Identities = 576/576 (100%), Positives = 576/576 (100%), Gaps = 0/576 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL Sbjct 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW Sbjct 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL Sbjct 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW Sbjct 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE Sbjct 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL Sbjct 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI Sbjct 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 Query 421 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY 480 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY Sbjct 421 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY 480 Query 481 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR 540 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR Sbjct 481 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR 540 Query 541 LVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG 576 LVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG Sbjct 541 LVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG 576 >gi|306781798|ref|ZP_07420135.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|306783844|ref|ZP_07422166.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|306788206|ref|ZP_07426528.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] 13 more sequence titles Length=576 Score = 1168 bits (3022), Expect = 0.0, Method: Compositional matrix adjust. Identities = 575/576 (99%), Positives = 576/576 (100%), Gaps = 0/576 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL Sbjct 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFE+IGLGCGFGPLNNRFFPPMGSILYW Sbjct 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFELIGLGCGFGPLNNRFFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL Sbjct 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW Sbjct 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE Sbjct 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL Sbjct 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI Sbjct 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 Query 421 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY 480 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY Sbjct 421 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY 480 Query 481 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR 540 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR Sbjct 481 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR 540 Query 541 LVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG 576 LVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG Sbjct 541 LVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG 576 >gi|340626144|ref|YP_004744596.1| hypothetical protein MCAN_11411 [Mycobacterium canettii CIPT 140010059] gi|340004334|emb|CCC43477.1| conserved membrane protein [Mycobacterium canettii CIPT 140010059] Length=576 Score = 1168 bits (3021), Expect = 0.0, Method: Compositional matrix adjust. Identities = 575/576 (99%), Positives = 575/576 (99%), Gaps = 0/576 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL Sbjct 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW Sbjct 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL Sbjct 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW Sbjct 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE Sbjct 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL Sbjct 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI Sbjct 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 Query 421 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY 480 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY Sbjct 421 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY 480 Query 481 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR 540 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR Sbjct 481 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR 540 Query 541 LVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG 576 LVDAATGEFERGYVRVADMV RQPWDDDVPVHVLPG Sbjct 541 LVDAATGEFERGYVRVADMVTRQPWDDDVPVHVLPG 576 >gi|289446722|ref|ZP_06436466.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] gi|289419680|gb|EFD16881.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] Length=576 Score = 1167 bits (3020), Expect = 0.0, Method: Compositional matrix adjust. Identities = 575/576 (99%), Positives = 575/576 (99%), Gaps = 0/576 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL Sbjct 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW Sbjct 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDG GPIPELGTTVGLL Sbjct 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGTGPIPELGTTVGLL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW Sbjct 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE Sbjct 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL Sbjct 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI Sbjct 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 Query 421 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY 480 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY Sbjct 421 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY 480 Query 481 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR 540 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR Sbjct 481 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR 540 Query 541 LVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG 576 LVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG Sbjct 541 LVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG 576 >gi|31792326|ref|NP_854819.1| hypothetical protein Mb1163 [Mycobacterium bovis AF2122/97] gi|31617914|emb|CAD94024.1| CONSERVED MEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] Length=576 Score = 1167 bits (3018), Expect = 0.0, Method: Compositional matrix adjust. Identities = 575/576 (99%), Positives = 575/576 (99%), Gaps = 0/576 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL Sbjct 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW Sbjct 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGT VGLL Sbjct 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTMVGLL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW Sbjct 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE Sbjct 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL Sbjct 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI Sbjct 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 Query 421 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY 480 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY Sbjct 421 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY 480 Query 481 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR 540 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR Sbjct 481 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR 540 Query 541 LVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG 576 LVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG Sbjct 541 LVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG 576 >gi|289442562|ref|ZP_06432306.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289749669|ref|ZP_06509047.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289415481|gb|EFD12721.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289690256|gb|EFD57685.1| conserved membrane protein [Mycobacterium tuberculosis T92] Length=576 Score = 1166 bits (3017), Expect = 0.0, Method: Compositional matrix adjust. Identities = 574/576 (99%), Positives = 575/576 (99%), Gaps = 0/576 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFLQP LPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL Sbjct 1 MGFLQPGLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW Sbjct 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL Sbjct 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW Sbjct 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE Sbjct 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTA+PMGVPLEWNVFMIFGVLSLFVGHACL Sbjct 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAVPMGVPLEWNVFMIFGVLSLFVGHACL 360 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI Sbjct 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 Query 421 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY 480 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY Sbjct 421 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY 480 Query 481 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR 540 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR Sbjct 481 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR 540 Query 541 LVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG 576 LVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG Sbjct 541 LVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG 576 >gi|254550130|ref|ZP_05140577.1| hypothetical protein Mtube_06679 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289761272|ref|ZP_06520650.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289708778|gb|EFD72794.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=589 Score = 1136 bits (2938), Expect = 0.0, Method: Compositional matrix adjust. Identities = 576/589 (98%), Positives = 576/589 (98%), Gaps = 13/589 (2%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL Sbjct 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW Sbjct 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL Sbjct 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW Sbjct 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE Sbjct 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL Sbjct 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI Sbjct 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 Query 421 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY 480 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY Sbjct 421 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY 480 Query 481 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR 540 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR Sbjct 481 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR 540 Query 541 LVDAA-------------TGEFERGYVRVADMVNRQPWDDDVPVHVLPG 576 LVDAA TGEFERGYVRVADMVNRQPWDDDVPVHVLPG Sbjct 541 LVDAATGEFERGYVRVAETGEFERGYVRVADMVNRQPWDDDVPVHVLPG 589 >gi|167969269|ref|ZP_02551546.1| hypothetical protein MtubH3_15065 [Mycobacterium tuberculosis H37Ra] Length=632 Score = 1070 bits (2767), Expect = 0.0, Method: Compositional matrix adjust. Identities = 529/530 (99%), Positives = 530/530 (100%), Gaps = 0/530 (0%) Query 35 VGFGTPVLLHLFYVAKILLYVLVGWLIVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLF 94 +GFGTPVLLHLFYVAKILLYVLVGWLIVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLF Sbjct 1 MGFGTPVLLHLFYVAKILLYVLVGWLIVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLF 60 Query 95 EVIGLGCGFGPLNNRFFPPMGSILYWMRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALL 154 EVIGLGCGFGPLNNRFFPPMGSILYWMRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALL Sbjct 61 EVIGLGCGFGPLNNRFFPPMGSILYWMRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALL 120 Query 155 VMMLLSALFTDGAGPIPELGTTVGLLPAWQIVLILLLLGVLGLRDKVIFLAARGEVYATL 214 VMMLLSALFTDGAGPIPELGTTVGLLPAWQIVLILLLLGVLGLRDKVIFLAARGEVYATL Sbjct 121 VMMLLSALFTDGAGPIPELGTTVGLLPAWQIVLILLLLGVLGLRDKVIFLAARGEVYATL 180 Query 215 TVTFLFGRLNGIDMIVAAKLVFLVIWIGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRM 274 TVTFLFGRLNGIDMIVAAKLVFLVIWIGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRM Sbjct 181 TVTFLFGRLNGIDMIVAAKLVFLVIWIGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRM 240 Query 275 FFKKFPGDLRPGLLSRIVAHVSTVIEMCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAI 334 FFKKFPGDLRPGLLSRIVAHVSTVIEMCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAI Sbjct 241 FFKKFPGDLRPGLLSRIVAHVSTVIEMCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAI 300 Query 335 PMGVPLEWNVFMIFGVLSLFVGHACLGLADVKNPVPLAILIAVVAGIVIAGNVFPRKISF 394 PMGVPLEWNVFMIFGVLSLFVGHACLGLADVKNPVPLAILIAVVAGIVIAGNVFPRKISF Sbjct 301 PMGVPLEWNVFMIFGVLSLFVGHACLGLADVKNPVPLAILIAVVAGIVIAGNVFPRKISF 360 Query 395 LAAMRYYAGNWDTTLWCIKPSAEDKINRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAF 454 LAAMRYYAGNWDTTLWCIKPSAEDKINRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAF Sbjct 361 LAAMRYYAGNWDTTLWCIKPSAEDKINRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAF 420 Query 455 RAMNSHGRALFTLAHRAMAGHDEDDYVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQR 514 RAMNSHGRALFTLAHRAMAGHDEDDYVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQR Sbjct 421 RAMNSHGRALFTLAHRAMAGHDEDDYVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQR 480 Query 515 CGFQPGEVRVVLLDAQPIHRQTQEYRLVDAATGEFERGYVRVADMVNRQP 564 CGFQPGEVRVVLLDAQPIHRQTQEYRLVDAATGEFERGYVRVADMVNRQP Sbjct 481 CGFQPGEVRVVLLDAQPIHRQTQEYRLVDAATGEFERGYVRVADMVNRQP 530 >gi|118616036|ref|YP_904368.1| hypothetical protein MUL_0139 [Mycobacterium ulcerans Agy99] gi|118568146|gb|ABL02897.1| conserved hypothetical membrane protein [Mycobacterium ulcerans Agy99] Length=573 Score = 1014 bits (2621), Expect = 0.0, Method: Compositional matrix adjust. Identities = 483/573 (85%), Positives = 530/573 (93%), Gaps = 3/573 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL+P LP +D+ EW +G+RS+KIRPMA+HWAEVGFGTPV++HLFYV KILLY+LVGWL Sbjct 1 MGFLKPVLPQVDIVEWGKGTRSEKIRPMARHWAEVGFGTPVVMHLFYVGKILLYILVGWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 IV +TKGI+GFTD +WY EPIVF+KVVLYTMLFEV+GLGCGFGPLNNRFFPPMGS LYW Sbjct 61 IVFSTKGIEGFTDVKSWYTEPIVFQKVVLYTMLFEVVGLGCGFGPLNNRFFPPMGSSLYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +RFGTIRLPPWP+RVPWT GTKRKPVDVALYALL++ML++ALFTDG+GP+PELG+ VGLL Sbjct 121 LRFGTIRLPPWPERVPWTAGTKRKPVDVALYALLLIMLVTALFTDGSGPMPELGSKVGLL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 P W+IV+ILLLL ++GLRDKVIFLAARGEVY TLTVTFL G GIDMIVAAKLVFLVIW Sbjct 181 PMWEIVMILLLLAMVGLRDKVIFLAARGEVYGTLTVTFLLG---GIDMIVAAKLVFLVIW 237 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFF KFP DLRPGLLSR++AH+ST IE Sbjct 238 MGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFAKFPDDLRPGLLSRMLAHLSTFIE 297 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 M VPV LF++HGGWPT AA MVCFHLGILTAIPMGVPLEWNVFMIFGVL+LFVGHA L Sbjct 298 MFVPVALFLSHGGWPTTAAAIAMVCFHLGILTAIPMGVPLEWNVFMIFGVLALFVGHADL 357 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GL DVK+PVP+AIL AVVAGIVI GN+FPRKISFL MRYYAGNWDTTLWCIKPSA+ KI Sbjct 358 GLTDVKSPVPVAILFAVVAGIVILGNLFPRKISFLPGMRYYAGNWDTTLWCIKPSADAKI 417 Query 421 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY 480 RGIVAIASMP AQLERFYGKDRAQIPMYLGYAFRAMN+HGRALFTLAHRAMAG DEDDY Sbjct 418 KRGIVAIASMPQAQLERFYGKDRAQIPMYLGYAFRAMNTHGRALFTLAHRAMAGQDEDDY 477 Query 481 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR 540 VITDGER+CSTAVGWNFGDGH+HNEQLIAAMQQRC F+PGEVR+VLLDAQPIH+QTQ YR Sbjct 478 VITDGERICSTAVGWNFGDGHMHNEQLIAAMQQRCNFEPGEVRIVLLDAQPIHKQTQAYR 537 Query 541 LVDAATGEFERGYVRVADMVNRQPWDDDVPVHV 573 LVDAATGEFERG+VRV+DMV RQPW DDVPV V Sbjct 538 LVDAATGEFERGWVRVSDMVTRQPWADDVPVQV 570 >gi|183984300|ref|YP_001852591.1| hypothetical protein MMAR_4329 [Mycobacterium marinum M] gi|183177626|gb|ACC42736.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=577 Score = 1013 bits (2620), Expect = 0.0, Method: Compositional matrix adjust. Identities = 483/573 (85%), Positives = 530/573 (93%), Gaps = 3/573 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL+P LP +D+ EW +G+RS+KIRPMA+HWAEVGFGTPV++HLFYV KILLY+LVGWL Sbjct 5 MGFLKPVLPQVDIVEWGKGTRSEKIRPMARHWAEVGFGTPVVMHLFYVGKILLYILVGWL 64 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 IV +TKGI+GFTD +WY EPIVF+KVVLYTMLFEV+GLGCGFGPLNNRFFPPMGS LYW Sbjct 65 IVFSTKGIEGFTDVKSWYTEPIVFQKVVLYTMLFEVVGLGCGFGPLNNRFFPPMGSSLYW 124 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +RFGTIRLPPWP+RVPWT GTKRKPVDVALYALL++ML++ALFTDG+GP+PELG+ VGLL Sbjct 125 LRFGTIRLPPWPERVPWTAGTKRKPVDVALYALLLIMLVTALFTDGSGPMPELGSKVGLL 184 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 P W+IV+ILLLL ++GLRDKVIFLAARGEVY TLTVTFL G GIDMIVAAKLVFLVIW Sbjct 185 PMWEIVMILLLLAMVGLRDKVIFLAARGEVYGTLTVTFLLG---GIDMIVAAKLVFLVIW 241 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFF KFP DLRPGLLSR++AH+ST IE Sbjct 242 MGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFAKFPDDLRPGLLSRMLAHLSTFIE 301 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 M VPV LF++HGGWPT AA MVCFHLGILTAIPMGVPLEWNVFMIFGVL+LFVGHA L Sbjct 302 MFVPVALFLSHGGWPTTAAAIAMVCFHLGILTAIPMGVPLEWNVFMIFGVLALFVGHADL 361 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GL DVK+PVP+AIL AVVAGIVI GN+FPRKISFL MRYYAGNWDTTLWCIKPSA+ KI Sbjct 362 GLTDVKSPVPVAILFAVVAGIVILGNLFPRKISFLPGMRYYAGNWDTTLWCIKPSADAKI 421 Query 421 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY 480 RGIVAIASMP AQLERFYGKDRAQIPMYLGYAFRAMN+HGRALFTLAHRAMAG DEDDY Sbjct 422 KRGIVAIASMPQAQLERFYGKDRAQIPMYLGYAFRAMNTHGRALFTLAHRAMAGQDEDDY 481 Query 481 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR 540 VITDGER+CSTAVGWNFGDGH+HNEQLIAAMQQRC F+PGEVR+VLLDAQPIH+QTQ YR Sbjct 482 VITDGERICSTAVGWNFGDGHMHNEQLIAAMQQRCNFEPGEVRIVLLDAQPIHKQTQAYR 541 Query 541 LVDAATGEFERGYVRVADMVNRQPWDDDVPVHV 573 LVDAATGEFERG+VRV+DMV RQPW DDVPV V Sbjct 542 LVDAATGEFERGWVRVSDMVTRQPWADDVPVQV 574 >gi|240170232|ref|ZP_04748891.1| hypothetical protein MkanA1_13028 [Mycobacterium kansasii ATCC 12478] Length=578 Score = 987 bits (2551), Expect = 0.0, Method: Compositional matrix adjust. Identities = 475/574 (83%), Positives = 518/574 (91%), Gaps = 3/574 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL+P LP +D+AEWS+G+RS+KIRPMA+HWAEVGFGTPV LHLFYV KI LY+L WL Sbjct 1 MGFLKPELPQVDVAEWSKGTRSEKIRPMARHWAEVGFGTPVALHLFYVVKIGLYILGAWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 +VL+TKGIDGFT+ +WY+EPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPP+GSILYW Sbjct 61 VVLSTKGIDGFTNVRSWYSEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPLGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +R TIRLPPWP RV TRGT R P+DV LYA L++M L ALF+DG GP+PELGT VGLL Sbjct 121 LRPNTIRLPPWPGRVALTRGTARAPIDVLLYAALLVMTLWALFSDGTGPVPELGTKVGLL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 P WQI IL +L V GLRDKVIFLAARGEVYA+LTVTFLFG G D+IVAAKLVFLVIW Sbjct 181 PVWQIWTILAILAVAGLRDKVIFLAARGEVYASLTVTFLFG---GADLIVAAKLVFLVIW 237 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLN+HFPFVISTMMSNNPL RPRFIKR FF+KFP DLRPG LSRI+AHVST IE Sbjct 238 MGAATSKLNKHFPFVISTMMSNNPLIRPRFIKRRFFEKFPDDLRPGRLSRIIAHVSTFIE 297 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 M VPVVLF AHGGWPT VAA +MVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHA L Sbjct 298 MAVPVVLFFAHGGWPTAVAAFVMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHAEL 357 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GL DVKNPVP+ IL AVVAG V+ GNVFPRKISFL MRYYAGNWDTTLWCIKPSA +KI Sbjct 358 GLTDVKNPVPVGILFAVVAGTVVLGNVFPRKISFLPGMRYYAGNWDTTLWCIKPSASEKI 417 Query 421 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY 480 +GIVAIASMPAAQLERFYGKD+AQIPMYLGYAFRAMN+HGRALFTLAHRAMAG +EDDY Sbjct 418 GKGIVAIASMPAAQLERFYGKDKAQIPMYLGYAFRAMNTHGRALFTLAHRAMAGQNEDDY 477 Query 481 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR 540 VITDGER+CSTA+GWNFGDGH+HNEQLIAAMQ+RC F+PGEVR+VLLDAQPIH+QTQ YR Sbjct 478 VITDGERICSTAIGWNFGDGHMHNEQLIAAMQERCHFEPGEVRIVLLDAQPIHKQTQAYR 537 Query 541 LVDAATGEFERGYVRVADMVNRQPWDDDVPVHVL 574 LVDAATGEFERGYVRVADMV RQPW DDVPVH+L Sbjct 538 LVDAATGEFERGYVRVADMVTRQPWADDVPVHLL 571 >gi|296170006|ref|ZP_06851611.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895324|gb|EFG75032.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=620 Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust. Identities = 456/577 (80%), Positives = 513/577 (89%), Gaps = 4/577 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL+P LP +D+AEW++G+RS+KIRPMA+HWAEVGFGTPV LHLFYVAKILLY+L WL Sbjct 42 MGFLKPELPQLDMAEWNKGTRSEKIRPMAKHWAEVGFGTPVALHLFYVAKILLYILGAWL 101 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 T G+ GFT+ A W++EPIVFEKVVLYTMLFEV+GLGCGFGPLNNRFFPPMGSILYW Sbjct 102 FASATAGLGGFTNVAKWWSEPIVFEKVVLYTMLFEVVGLGCGFGPLNNRFFPPMGSILYW 161 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 MRFGTIRLPPWPDRVP T+GTKRKP+DVALYAL +++ LSALF DG GP+PELGTTVGLL Sbjct 162 MRFGTIRLPPWPDRVPLTKGTKRKPIDVALYALFLLVTLSALFADGTGPMPELGTTVGLL 221 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 PAW+IVLILLLL VLGLRDKVIFLAARGEVYAT+ VTFLFG G+DMIV +K+VFLVIW Sbjct 222 PAWKIVLILLLLAVLGLRDKVIFLAARGEVYATMAVTFLFG---GVDMIVGSKVVFLVIW 278 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLN+HFPFVISTMMSNNPL RPR++KR FF+KFP DLRPG LSR +AH+ST IE Sbjct 279 MGAATSKLNKHFPFVISTMMSNNPLVRPRWLKRQFFEKFPDDLRPGRLSRWLAHLSTAIE 338 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 M VP+ LF H GWP VAA +MVCFHLGIL +IPMGVPLEWNVFMIFGVLSLFV HA L Sbjct 339 MLVPLPLFFCHSGWPITVAAIVMVCFHLGILLSIPMGVPLEWNVFMIFGVLSLFVAHARL 398 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GL D+++PV +AIL V+AGIV+ GN+FPRKISFL MRYYAGNWDTTLWCIKPSA DKI Sbjct 399 GLRDLRHPVVVAILFVVIAGIVLLGNMFPRKISFLPGMRYYAGNWDTTLWCIKPSASDKI 458 Query 421 NRGIVAIASMPAAQLERFYGK-DRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 RG+VAIASMP AQLERFYG + AQIP+Y+GYAFR N+HGRALFTLAHRAMAG +EDD Sbjct 459 ARGVVAIASMPQAQLERFYGSPEAAQIPLYMGYAFRGFNTHGRALFTLAHRAMAGQNEDD 518 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 YV+TDGER+CSTA+GWNFGDGH+HNEQLIAA+Q+RC F+PGEVRVVLLDAQPIH+QTQ Y Sbjct 519 YVLTDGERICSTAIGWNFGDGHMHNEQLIAALQERCHFEPGEVRVVLLDAQPIHKQTQAY 578 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG 576 RLVDAATGEFERG VRVADMV RQPW DDVPV +L G Sbjct 579 RLVDAATGEFERGIVRVADMVTRQPWADDVPVELLSG 615 >gi|254823169|ref|ZP_05228170.1| hypothetical protein MintA_24789 [Mycobacterium intracellulare ATCC 13950] Length=574 Score = 925 bits (2391), Expect = 0.0, Method: Compositional matrix adjust. Identities = 453/577 (79%), Positives = 509/577 (89%), Gaps = 4/577 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL+P LP +D+AEW++GSRS KIRPMA+HWAEVGFGTPV LHLFYV KILLY+L W+ Sbjct 1 MGFLKPELPQLDMAEWNKGSRSDKIRPMAKHWAEVGFGTPVALHLFYVVKILLYILGAWV 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 T+G+ GFT A+W++EPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGS+LYW Sbjct 61 FASATRGLGGFTQVASWWSEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSVLYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 MRFGTIRLPPWPDRVP TRGTKRKP+DVALYAL +++ +ALF DG GPIPELGTT+GLL Sbjct 121 MRFGTIRLPPWPDRVPLTRGTKRKPIDVALYALFLLVTFAALFADGTGPIPELGTTIGLL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 PAW++VLILLLL VLGLRDKVIFLAARGEVYAT+ VTFLF DMIV +K+VFLVIW Sbjct 181 PAWKVVLILLLLAVLGLRDKVIFLAARGEVYATMAVTFLFA---APDMIVGSKVVFLVIW 237 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLN+HFPFVISTMMSNNPL RPR++KR FF+KFP DLRPG LSR +AH+ST IE Sbjct 238 MGAATSKLNKHFPFVISTMMSNNPLVRPRWLKRRFFEKFPDDLRPGWLSRWLAHLSTAIE 297 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 M VP+ LF HGGWP VAA +MVCFHLGIL +IPMGVPLEWNVFMIFGVLSLFV H L Sbjct 298 MLVPLPLFFCHGGWPVTVAAVVMVCFHLGILVSIPMGVPLEWNVFMIFGVLSLFVAHTQL 357 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GLAD+K+PV +AIL V+AGIV+ GN+FPRKISFL MRYYAGNWDTTLWCIKPSA DKI Sbjct 358 GLADLKHPVVVAILFVVIAGIVLLGNMFPRKISFLPGMRYYAGNWDTTLWCIKPSANDKI 417 Query 421 NRGIVAIASMPAAQLERFYGK-DRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 RGIVAIASMP AQLERFYG + AQIP+Y+GYAFR N+HGRALFTLAHRAMAG +EDD Sbjct 418 GRGIVAIASMPQAQLERFYGSPEAAQIPLYMGYAFRGFNTHGRALFTLAHRAMAGQNEDD 477 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 YV+TDGER+CSTA+GWNFGDGH+HNEQLI+A+Q+RC F+PGEVRVVLLDAQPIH+QTQ Y Sbjct 478 YVLTDGERICSTAIGWNFGDGHMHNEQLISALQERCHFEPGEVRVVLLDAQPIHKQTQAY 537 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG 576 RLVDAATGEFERG VRVADMV RQPW DDVPV V+ G Sbjct 538 RLVDAATGEFERGIVRVADMVTRQPWADDVPVEVVSG 574 >gi|342861729|ref|ZP_08718375.1| hypothetical protein MCOL_22686 [Mycobacterium colombiense CECT 3035] gi|342130863|gb|EGT84159.1| hypothetical protein MCOL_22686 [Mycobacterium colombiense CECT 3035] Length=577 Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust. Identities = 449/575 (79%), Positives = 506/575 (88%), Gaps = 4/575 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL+P LP +D+AEW++G+RS+KIRPMA+HWAEVGFGTPV+LHLFYV KILLY+L WL Sbjct 1 MGFLKPELPQLDMAEWNKGTRSEKIRPMAKHWAEVGFGTPVVLHLFYVVKILLYILGAWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 T G+ GFT A+W++EPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW Sbjct 61 FASATDGLGGFTRVASWWSEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 MRFGTIRLPPWPDRVP T+GTKRKPVDVALYAL +++ L+ALF DG GPIPELGTT+GLL Sbjct 121 MRFGTIRLPPWPDRVPLTKGTKRKPVDVALYALFLLVTLAALFADGTGPIPELGTTIGLL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 PAW+IVLILLLL V+GLRDKVIFLAARGEVYAT+ VTFLF DMIV +K+VFLVIW Sbjct 181 PAWKIVLILLLLAVVGLRDKVIFLAARGEVYATMAVTFLFA---APDMIVGSKVVFLVIW 237 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLN+HFPFVISTMMSNNPL RPR++KR FF+ FP DLRPG LSR +AH+ST IE Sbjct 238 MGAATSKLNKHFPFVISTMMSNNPLVRPRWLKRRFFESFPDDLRPGRLSRWLAHLSTAIE 297 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 M VP+ LF HGGWP +AA MVCFHLGIL +IPMGVPLEWNVFMIFGVLSLFV H + Sbjct 298 MLVPLPLFFCHGGWPVTIAAIAMVCFHLGILVSIPMGVPLEWNVFMIFGVLSLFVAHTHI 357 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GL D+++PV +A+L V+AGIV+ GN+FPRKISFL MRYYAGNWDTTLWCIK SA DKI Sbjct 358 GLRDLRHPVVVAVLFVVIAGIVVLGNMFPRKISFLPGMRYYAGNWDTTLWCIKGSANDKI 417 Query 421 NRGIVAIASMPAAQLERFYGK-DRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 RGIVAIASMP AQLERFYG + AQIP+Y+GYAFR N+HGRALFTLAHRAMAG +EDD Sbjct 418 GRGIVAIASMPQAQLERFYGSPEAAQIPIYMGYAFRGFNTHGRALFTLAHRAMAGQNEDD 477 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 YVITDGER+CSTA+GWNFGDGH+HNEQLIAA+Q+RC F+PGEVRVVLLDAQPIH+QTQ Y Sbjct 478 YVITDGERICSTAIGWNFGDGHMHNEQLIAALQERCHFEPGEVRVVLLDAQPIHKQTQTY 537 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVHVL 574 RLVDAATGEFERG VRVADMV RQPW DDVPV V+ Sbjct 538 RLVDAATGEFERGIVRVADMVVRQPWADDVPVQVV 572 >gi|336458750|gb|EGO37710.1| Transmembrane protein of unknown function (DUF3556) [Mycobacterium avium subsp. paratuberculosis S397] Length=593 Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust. Identities = 453/575 (79%), Positives = 512/575 (90%), Gaps = 4/575 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL+P LP +D+AEWS+G+RS KIRPMA+HWAEVGFGTPV LHLFYV KILLY+L GWL Sbjct 12 MGFLKPELPQLDMAEWSKGTRSDKIRPMAKHWAEVGFGTPVALHLFYVVKILLYILGGWL 71 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 T+G+ GFT A+W++EPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW Sbjct 72 FASATRGLGGFTHVASWWSEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 131 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 MRFGTIRLPPWPDRVP+T GTKRKPVDVALYAL +++ L+ALF DG GP+PELGTT+GLL Sbjct 132 MRFGTIRLPPWPDRVPFTAGTKRKPVDVALYALFLLLTLAALFADGTGPVPELGTTIGLL 191 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 PAW+IVLILL+L VLGLRDKVIFLAARGEVYA++ VTFLFG DMIV +K+VFLVIW Sbjct 192 PAWKIVLILLVLAVLGLRDKVIFLAARGEVYASMAVTFLFG---APDMIVGSKVVFLVIW 248 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLN+HFPFVISTMMSNNPL RPR++KR FF+KFP DLRPG LSR +AH+ST IE Sbjct 249 MGAATSKLNKHFPFVISTMMSNNPLVRPRWLKRRFFEKFPDDLRPGRLSRWIAHLSTAIE 308 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 M VP+ LF HGGWP VAA +MVCFHLGIL +IPMGVPLEWNVFMIFGVLSLFV H + Sbjct 309 MLVPLPLFFCHGGWPVTVAAVVMVCFHLGILVSIPMGVPLEWNVFMIFGVLSLFVAHTGI 368 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GL D+++PV +A+L V+AGIV+ GN+FPRKISFL MRYYAGNWDTTLWCIKPSA +KI Sbjct 369 GLGDLRHPVVVAVLFVVIAGIVVLGNMFPRKISFLPGMRYYAGNWDTTLWCIKPSASEKI 428 Query 421 NRGIVAIASMPAAQLERFYGK-DRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 +RGIVAIASMP AQLERFYG + AQIP+Y+GYAFR N+HGRALFTLAHRAMAG +EDD Sbjct 429 SRGIVAIASMPQAQLERFYGSPEAAQIPLYMGYAFRGFNTHGRALFTLAHRAMAGQNEDD 488 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 YVITDGER+CSTA+GWNFGDGH+HNEQLIAA+Q+RC F+PGEVRVVLLDAQPIH+QTQ Y Sbjct 489 YVITDGERICSTAIGWNFGDGHMHNEQLIAALQERCHFEPGEVRVVLLDAQPIHKQTQAY 548 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVHVL 574 RLVDAATGEFERG VRVADMV RQPWDDDVPV V+ Sbjct 549 RLVDAATGEFERGIVRVADMVVRQPWDDDVPVQVV 583 >gi|41408760|ref|NP_961596.1| hypothetical protein MAP2662c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397118|gb|AAS04979.1| hypothetical protein MAP_2662c [Mycobacterium avium subsp. paratuberculosis K-10] Length=582 Score = 895 bits (2314), Expect = 0.0, Method: Compositional matrix adjust. Identities = 453/575 (79%), Positives = 512/575 (90%), Gaps = 4/575 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL+P LP +D+AEWS+G+RS KIRPMA+HWAEVGFGTPV LHLFYV KILLY+L GWL Sbjct 1 MGFLKPELPQLDMAEWSKGTRSDKIRPMAKHWAEVGFGTPVALHLFYVVKILLYILGGWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 T+G+ GFT A+W++EPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW Sbjct 61 FASATRGLGGFTHVASWWSEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 MRFGTIRLPPWPDRVP+T GTKRKPVDVALYAL +++ L+ALF DG GP+PELGTT+GLL Sbjct 121 MRFGTIRLPPWPDRVPFTAGTKRKPVDVALYALFLLLTLAALFADGTGPVPELGTTIGLL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 PAW+IVLILL+L VLGLRDKVIFLAARGEVYA++ VTFLFG DMIV +K+VFLVIW Sbjct 181 PAWKIVLILLVLAVLGLRDKVIFLAARGEVYASMAVTFLFG---APDMIVGSKVVFLVIW 237 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLN+HFPFVISTMMSNNPL RPR++KR FF+KFP DLRPG LSR +AH+ST IE Sbjct 238 MGAATSKLNKHFPFVISTMMSNNPLVRPRWLKRRFFEKFPDDLRPGRLSRWIAHLSTAIE 297 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 M VP+ LF HGGWP VAA +MVCFHLGIL +IPMGVPLEWNVFMIFGVLSLFV H + Sbjct 298 MLVPLPLFFCHGGWPVTVAAVVMVCFHLGILVSIPMGVPLEWNVFMIFGVLSLFVAHTGI 357 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GL D+++PV +A+L V+AGIV+ GN+FPRKISFL MRYYAGNWDTTLWCIKPSA +KI Sbjct 358 GLGDLRHPVVVAVLFVVIAGIVVLGNMFPRKISFLPGMRYYAGNWDTTLWCIKPSASEKI 417 Query 421 NRGIVAIASMPAAQLERFYGK-DRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 +RGIVAIASMP AQLERFYG + AQIP+Y+GYAFR N+HGRALFTLAHRAMAG +EDD Sbjct 418 SRGIVAIASMPQAQLERFYGSPEAAQIPLYMGYAFRGFNTHGRALFTLAHRAMAGQNEDD 477 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 YVITDGER+CSTA+GWNFGDGH+HNEQLIAA+Q+RC F+PGEVRVVLLDAQPIH+QTQ Y Sbjct 478 YVITDGERICSTAIGWNFGDGHMHNEQLIAALQERCHFEPGEVRVVLLDAQPIHKQTQAY 537 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVHVL 574 RLVDAATGEFERG VRVADMV RQPWDDDVPV V+ Sbjct 538 RLVDAATGEFERGIVRVADMVVRQPWDDDVPVQVV 572 >gi|118464709|ref|YP_880506.1| hypothetical protein MAV_1261 [Mycobacterium avium 104] gi|118165996|gb|ABK66893.1| conserved membrane protein [Mycobacterium avium 104] Length=582 Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust. Identities = 452/575 (79%), Positives = 512/575 (90%), Gaps = 4/575 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL+P LP +D+AEW++G+RS KIRPMA+HWAEVGFGTPV LHLFYV KILLY+L GWL Sbjct 1 MGFLKPELPQLDMAEWNKGTRSDKIRPMAKHWAEVGFGTPVALHLFYVVKILLYILGGWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 T+G+ GFT A+W++EPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW Sbjct 61 FASATRGLGGFTHVASWWSEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 MRFGTIRLPPWPDRVP+T GTKRKPVDVALYAL +++ L+ALF DG GP+PELGTT+GLL Sbjct 121 MRFGTIRLPPWPDRVPFTAGTKRKPVDVALYALFLLLTLAALFADGTGPVPELGTTIGLL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 PAW+IVLILL+L VLGLRDKVIFLAARGEVYA++ VTFLFG DMIV +K+VFLVIW Sbjct 181 PAWKIVLILLVLAVLGLRDKVIFLAARGEVYASMAVTFLFG---APDMIVGSKVVFLVIW 237 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLN+HFPFVISTMMSNNPL RPR++KR FF+KFP DLRPG LSR +AH+ST IE Sbjct 238 MGAATSKLNKHFPFVISTMMSNNPLVRPRWLKRRFFEKFPDDLRPGRLSRWIAHLSTAIE 297 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 M VP+ LF HGGWP VAA +MVCFHLGIL +IPMGVPLEWNVFMIFGVLSLFV H + Sbjct 298 MLVPLPLFFCHGGWPVTVAAVVMVCFHLGILVSIPMGVPLEWNVFMIFGVLSLFVAHTGI 357 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GL D+++PV +A+L V+AGIV+ GN+FPRKISFL MRYYAGNWDTTLWCIKPSA +KI Sbjct 358 GLGDLRHPVVVAVLFVVIAGIVVLGNMFPRKISFLPGMRYYAGNWDTTLWCIKPSASEKI 417 Query 421 NRGIVAIASMPAAQLERFYGK-DRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 +RGIVAIASMP AQLERFYG + AQIP+Y+GYAFR N+HGRALFTLAHRAMAG +EDD Sbjct 418 SRGIVAIASMPQAQLERFYGSPEAAQIPLYMGYAFRGFNTHGRALFTLAHRAMAGQNEDD 477 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 YVITDGER+CSTA+GWNFGDGH+HNEQLIAA+Q+RC F+PGEVRVVLLDAQPIH+QTQ Y Sbjct 478 YVITDGERICSTAIGWNFGDGHMHNEQLIAALQERCHFEPGEVRVVLLDAQPIHKQTQAY 537 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVHVL 574 RLVDAATGEFERG VRVADMV RQPWDDDVPV V+ Sbjct 538 RLVDAATGEFERGIVRVADMVVRQPWDDDVPVQVV 572 >gi|254774138|ref|ZP_05215654.1| hypothetical protein MaviaA2_05615 [Mycobacterium avium subsp. avium ATCC 25291] Length=582 Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust. Identities = 452/575 (79%), Positives = 510/575 (89%), Gaps = 4/575 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL+P LP +D+AEWS+G+RS KIRPMA+HWAEVGFGTPV LHLFYV KILLY+L GWL Sbjct 1 MGFLKPELPQLDMAEWSKGTRSDKIRPMAKHWAEVGFGTPVALHLFYVVKILLYILGGWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 T+G+ GFT A+W++EPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW Sbjct 61 FASATRGLGGFTHVASWWSEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 MRFGTIRLPPWPDRVP+T GTKRKPVDVALYAL +++ L+ALF DG GP+PELGTT+GLL Sbjct 121 MRFGTIRLPPWPDRVPFTAGTKRKPVDVALYALFLLLTLAALFADGTGPVPELGTTIGLL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 PAW+IVLILL+L VLGLRDKVIFLAARGEVYA++ VTFLFG DMIV +K+VFLVIW Sbjct 181 PAWKIVLILLVLAVLGLRDKVIFLAARGEVYASMAVTFLFG---APDMIVGSKVVFLVIW 237 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLN+HFPFVISTMMSNNPL RPR++KR FF+KFP DLRPG LSR +AH+ST IE Sbjct 238 MGAATSKLNKHFPFVISTMMSNNPLVRPRWLKRRFFEKFPDDLRPGRLSRWIAHLSTAIE 297 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 M VP+ LF HGGWP VAA +MVCFHLGIL +IPMGVPLEWNV MIFGVLSLFV H + Sbjct 298 MLVPLPLFFCHGGWPVTVAAVVMVCFHLGILVSIPMGVPLEWNVLMIFGVLSLFVAHTGI 357 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GL D++ PV +A+L V+AGIV+ GN+FPRKISFL MRYYAGNWDTTLWCIKPSA +KI Sbjct 358 GLGDLRYPVVVAVLFVVIAGIVVLGNMFPRKISFLPGMRYYAGNWDTTLWCIKPSASEKI 417 Query 421 NRGIVAIASMPAAQLERFYGK-DRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 +RGIVAIASMP AQLERFYG + AQIP+Y+GYAFR N+HGRALFTLAHRAMAG +EDD Sbjct 418 SRGIVAIASMPQAQLERFYGSPEAAQIPLYMGYAFRGFNTHGRALFTLAHRAMAGQNEDD 477 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 YVITDGER+CSTA+GWNFGDGH+HNEQLIAA+Q+RC F+PGEVRVVLLDAQPIH+QTQ Y Sbjct 478 YVITDGERICSTAIGWNFGDGHMHNEQLIAALQERCHFEPGEVRVVLLDAQPIHKQTQAY 537 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVHVL 574 RLVDAATGEFERG VRVADMV RQPWDDDVPV V+ Sbjct 538 RLVDAATGEFERGIVRVADMVVRQPWDDDVPVQVV 572 >gi|145222701|ref|YP_001133379.1| hypothetical protein Mflv_2113 [Mycobacterium gilvum PYR-GCK] gi|145215187|gb|ABP44591.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=576 Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust. Identities = 418/574 (73%), Positives = 492/574 (86%), Gaps = 5/574 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL+ P +D AEWS+G+R+++I PMA+HWAEVGFGTPV++HLFYV KILLYVLV WL Sbjct 1 MGFLKQDAPVVDYAEWSKGTRAERIVPMARHWAEVGFGTPVVIHLFYVVKILLYVLVAWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 IVL+T GIDGFTD AAWY EPIV++KVV YTMLFEV+GLGCGFGPLNNRFFPPMGS+LYW Sbjct 61 IVLSTSGIDGFTDVAAWYHEPIVYQKVVFYTMLFEVVGLGCGFGPLNNRFFPPMGSVLYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +R TIRLPPWP+RVP T G R PVDV LYA L+ +L+ ALF+DG GPIPE+G+ VG+L Sbjct 121 LRPRTIRLPPWPNRVPLTAGDTRTPVDVVLYAALLAVLVIALFSDGTGPIPEIGSEVGVL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 P WQ I+ LL V GLRDKVIFLAARGEVY +L V FLF +G D+I+AAKLV L IW Sbjct 181 PVWQTATIIGLLVVAGLRDKVIFLAARGEVYGSLAVCFLF---SGADIIIAAKLVCLTIW 237 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 IGAATSKLN+HFPFVISTMMSNNP+ RPR IKR FF+ FP DLRPG SR++AH ST IE Sbjct 238 IGAATSKLNKHFPFVISTMMSNNPVIRPRSIKRKFFEHFPDDLRPGRASRVLAHFSTAIE 297 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 M VP+VLF +HGGWPT +AA +M+ FH GIL+AIPMGVPLEWNVFM+F VL+LFVG+A + Sbjct 298 MLVPLVLFFSHGGWPTAIAAFVMLVFHFGILSAIPMGVPLEWNVFMMFSVLALFVGNAGI 357 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GL D+++P P+ +L AVVAG V+ GN+FPRK+SFL MRYYAGNWDTTLWC+KPSA +KI Sbjct 358 GLGDLQSPWPI-VLFAVVAGTVVIGNLFPRKVSFLPGMRYYAGNWDTTLWCVKPSASEKI 416 Query 421 NRGIVAIASMPAAQLERFYG-KDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 GIVAIASMPAAQ+E+FYG K+ A++ Y+GYAFR+ N+HGRA+FTLAHRAMAG DE + Sbjct 417 TSGIVAIASMPAAQMEKFYGSKETAEMYQYMGYAFRSFNTHGRAMFTLAHRAMAGQDEGE 476 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 YV+TDGER+CSTA+GWNFGDGH+HNEQLI A+Q+RC F+PGEVRV++LDAQPIH+Q QEY Sbjct 477 YVLTDGERICSTAIGWNFGDGHMHNEQLITALQKRCRFEPGEVRVLILDAQPIHKQRQEY 536 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVHV 573 RLVDAATGEFERGYV VADMV RQPWDD VPVHV Sbjct 537 RLVDAATGEFERGYVMVADMVTRQPWDDTVPVHV 570 >gi|120405543|ref|YP_955372.1| hypothetical protein Mvan_4591 [Mycobacterium vanbaalenii PYR-1] gi|119958361|gb|ABM15366.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=574 Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/574 (74%), Positives = 491/574 (86%), Gaps = 5/574 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL+ P +D AEWS+G+R+++I PMA+HWAEVGFGTPV+LHLFYV KILLY+LV WL Sbjct 1 MGFLKQDAPVVDYAEWSKGTRAERIVPMARHWAEVGFGTPVVLHLFYVVKILLYILVAWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 IVLTT GIDGFT+ AAWY EPIV++KVV YTMLFEV+GLGCGFGPLNNRFFPPMGSILYW Sbjct 61 IVLTTSGIDGFTNVAAWYHEPIVYQKVVFYTMLFEVVGLGCGFGPLNNRFFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +R TIRLPPWP+RVP T G R P DV LYA L++MLL ALF+DG GPIPELG+ VG+L Sbjct 121 LRPRTIRLPPWPNRVPLTAGDSRTPFDVLLYAALLVMLLFALFSDGTGPIPELGSEVGVL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 P WQ I+ LL V GLRDKVIFLAARGEVY +L V FLF +G D+I+AAKLV LVIW Sbjct 181 PVWQTATIIGLLVVAGLRDKVIFLAARGEVYGSLAVCFLF---SGADIIIAAKLVCLVIW 237 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLN+HFPFVISTMMSNNP+ RPR+IKR FF+ FP DLRPG SR +AH ST IE Sbjct 238 LGAATSKLNKHFPFVISTMMSNNPVMRPRWIKRKFFEHFPDDLRPGRASRFLAHFSTAIE 297 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 VP+VLF +HGGW T +AA +M+ FH GIL+AIPMGVPLEWNVFM+F VL+LFVG+A + Sbjct 298 GLVPLVLFFSHGGWATAIAAFVMLVFHFGILSAIPMGVPLEWNVFMMFSVLALFVGNAGI 357 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GLAD+++P P+ +L A VAG V+ GN+FPRK+SFL MRYYAGNWDTTLWC+KPSA +KI Sbjct 358 GLADLQSPWPI-LLFAAVAGTVVIGNLFPRKVSFLPGMRYYAGNWDTTLWCVKPSAAEKI 416 Query 421 NRGIVAIASMPAAQLERFYG-KDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 GIVAIASMPAAQ+E+FYG K+ A++ Y+GYAFR+ N+HGRA+FTLAHRAMA EDD Sbjct 417 ANGIVAIASMPAAQMEKFYGSKETAEVYQYMGYAFRSFNTHGRAMFTLAHRAMADGSEDD 476 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 YV+TDGER+CSTA+GWNFGDGH+HNEQLIAA+Q+RC F+PGEVRV+LLDAQPIHRQ QEY Sbjct 477 YVLTDGERICSTAIGWNFGDGHMHNEQLIAALQKRCQFEPGEVRVLLLDAQPIHRQRQEY 536 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVHV 573 RLVDAATGEFERGYV VADMV RQPWDD VPVHV Sbjct 537 RLVDAATGEFERGYVMVADMVTRQPWDDTVPVHV 570 >gi|333989724|ref|YP_004522338.1| hypothetical protein JDM601_1084 [Mycobacterium sp. JDM601] gi|333485692|gb|AEF35084.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=577 Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/574 (76%), Positives = 491/574 (86%), Gaps = 4/574 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL+P LP +D AEWS+G+RS+KIRPMA+HWAEVGFGTPV+LHLFYV KI LY+L WL Sbjct 1 MGFLKPELPVVDFAEWSKGTRSEKIRPMARHWAEVGFGTPVVLHLFYVLKIGLYILGAWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 L+T GIDGFT+ W++EPIVFEKVVLYT+LFEVIGLGCGFGPLNNRFFPPMGSILYW Sbjct 61 FALSTAGIDGFTEVRQWWSEPIVFEKVVLYTLLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +R GTIRLPPWP R+P T GT R P+D ALYA L++MLL AL +DG GPI L T VG+L Sbjct 121 LRPGTIRLPPWPRRIPLTTGTGRTPLDAALYAALLVMLLVALLSDGTGPIAALHTEVGVL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 P WQI+ +L +L + GLRDKVIFLAARGEVYA L FLF G+DMI+AAK +F+VIW Sbjct 181 PHWQILTVLGILALAGLRDKVIFLAARGEVYAPLAAAFLF---TGVDMIIAAKAIFMVIW 237 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLNRHFPFVISTMMSNNPL RP+ +KR FFK FP DLRPG S+ +AHVST IE Sbjct 238 LGAATSKLNRHFPFVISTMMSNNPLIRPKALKRAFFKDFPEDLRPGGPSKALAHVSTAIE 297 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 M VP+VLF +HGGWPT VAA +MVCFHLGIL AIPMGVPLEWNVFMIFGVLSLFV HA L Sbjct 298 MLVPLVLFFSHGGWPTAVAAFVMVCFHLGILAAIPMGVPLEWNVFMIFGVLSLFVAHADL 357 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GL DV N +A+L A+ AG V+ GN+FPRK+SFL MRYYAGNWDTTLWC+KPSAE+KI Sbjct 358 GLRDVNNAWAVALLFAISAGTVVLGNLFPRKVSFLPGMRYYAGNWDTTLWCLKPSAEEKI 417 Query 421 NRGIVAIASMPAAQLERFYGK-DRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 RGIVAIASMPAAQLERFYG + AQIP+Y+GYAFR N+HGRALFTLAHRAMAG DE D Sbjct 418 ARGIVAIASMPAAQLERFYGSAEAAQIPIYMGYAFRGFNTHGRALFTLAHRAMAGRDESD 477 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 Y +TDGER+CSTAVGWNFGDGH+ NEQLI A+QQRCGF+PGEVRVV+LDAQPIHRQTQ Y Sbjct 478 YTLTDGERICSTAVGWNFGDGHMTNEQLIEALQQRCGFEPGEVRVVILDAQPIHRQTQAY 537 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVHV 573 RLVDAATG FERG+V+VADMV RQPWDDD+PV+V Sbjct 538 RLVDAATGVFERGHVKVADMVARQPWDDDLPVYV 571 >gi|108801046|ref|YP_641243.1| hypothetical protein Mmcs_4082 [Mycobacterium sp. MCS] gi|119870188|ref|YP_940140.1| hypothetical protein Mkms_4158 [Mycobacterium sp. KMS] gi|108771465|gb|ABG10187.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696277|gb|ABL93350.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=592 Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/574 (73%), Positives = 486/574 (85%), Gaps = 3/574 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL+P +P +D AEWS+G+RS+KIRPMA+HWAEVGFGTPV++HLFYV KILLY+L GWL Sbjct 1 MGFLKPDMPVVDFAEWSKGTRSEKIRPMARHWAEVGFGTPVVMHLFYVVKILLYILGGWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 L T G+DGFTD A W+ EPIVF+KVVLYTMLFEV+GLGCGFGPLNNRFFPPMGSILYW Sbjct 61 FALATHGVDGFTDVAQWWTEPIVFQKVVLYTMLFEVVGLGCGFGPLNNRFFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +R GTIRLPPWPDRVP T+G R P D ALY L+++LL ALF+DG GP+P LGT +G+L Sbjct 121 LRPGTIRLPPWPDRVPLTKGDTRTPFDAALYGALLVVLLVALFSDGTGPVPALGTEIGVL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 P WQI IL LL VLGLRDKVIFLAARGEVY + TV FLF G+DM++AAKLV + IW Sbjct 181 PLWQIWTILGLLAVLGLRDKVIFLAARGEVYGSFTVAFLFVGY-GVDMLLAAKLVCVAIW 239 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLN+HFPFVISTMMSNNPL R + +KR FF+KFP DLRPG +SR++AH ST IE Sbjct 240 MGAATSKLNKHFPFVISTMMSNNPLIRTKSLKRRFFEKFPDDLRPGRVSRVIAHFSTAIE 299 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 M VP+ L +HGGWPT +AA +M+ FH GIL+AIPMGVPLEWNVFM+F V++LFVGHA L Sbjct 300 MLVPLALLFSHGGWPTAIAAFVMLVFHFGILSAIPMGVPLEWNVFMMFCVITLFVGHADL 359 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GLA++ P+P+ +L AV+A V GN+FPRKISFL MRYYAGNWDTT WCIKPSA +KI Sbjct 360 GLAELSTPLPV-VLFAVLALTVALGNLFPRKISFLPGMRYYAGNWDTTWWCIKPSANEKI 418 Query 421 NRGIVAIASMPAAQLERFYGK-DRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 RG+VAIASMPA+QLE+ YG ++A I +Y GYAFR NSHG+AL TL H A+AG +EDD Sbjct 419 ERGLVAIASMPASQLEKVYGSPEQAMIYLYKGYAFRGFNSHGKALLTLVHNALAGRNEDD 478 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 YVIT+GER+CSTAVGWNFGDGH+HNEQLIAAMQ+RC F+PGEVRV+LLDAQPIHRQ QEY Sbjct 479 YVITEGERLCSTAVGWNFGDGHMHNEQLIAAMQRRCQFEPGEVRVILLDAQPIHRQRQEY 538 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVHV 573 RLVDAATGEFERGYV V+DMV QPW DD+PVHV Sbjct 539 RLVDAATGEFERGYVNVSDMVTGQPWTDDIPVHV 572 >gi|169631626|ref|YP_001705275.1| hypothetical protein MAB_4552 [Mycobacterium abscessus ATCC 19977] gi|169243593|emb|CAM64621.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=561 Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust. Identities = 419/575 (73%), Positives = 482/575 (84%), Gaps = 18/575 (3%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL+P LP +D+A+W +G+R++KIRPMA+HWAEVGFGTPV LHLFYV KI LY+L GWL Sbjct 1 MGFLKPTLPVVDVADWGKGTRAEKIRPMARHWAEVGFGTPVALHLFYVLKIALYILGGWL 60 Query 61 IVL-TTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILY 119 + TT+GID +TD ++ PIVF+KVVLYTMLFEV+GLGCGFGPLNNRFFPP+GSILY Sbjct 61 FAMVTTEGIDRWTD----FSLPIVFQKVVLYTMLFEVVGLGCGFGPLNNRFFPPLGSILY 116 Query 120 WMRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGL 179 W+R TIRLPPWP R+P T+G+ R VD+ALYA + M+L AL + T GL Sbjct 117 WLRPNTIRLPPWP-RIPLTKGSARTAVDIALYAAFLGMVLVALLSQP--------TAAGL 167 Query 180 LPAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVI 239 LP WQ IL LL + GLRDKVIFLAARGEVY LTV FLF G DMI+AAKL+F+VI Sbjct 168 LPTWQTAAILGLLVITGLRDKVIFLAARGEVYGALTVAFLF---TGADMIMAAKLIFMVI 224 Query 240 WIGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVI 299 WIGAATSKLNRHFPFVISTMMSNNPL R R +KR FF+KFP DLRPG LSR+VAHVST + Sbjct 225 WIGAATSKLNRHFPFVISTMMSNNPLIRARRLKRAFFEKFPDDLRPGRLSRVVAHVSTAV 284 Query 300 EMCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHAC 359 E VP LF +HGGW T VAA +MVCFHLGILTAIPMGVPLEWNVFMIFGVL+LFV HA Sbjct 285 EGLVPFALFFSHGGWVTTVAAGVMVCFHLGILTAIPMGVPLEWNVFMIFGVLALFVSHAN 344 Query 360 LGLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDK 419 +GL+D+++P P+ +L+AV AG+V GN+ PRK+SFL MRYYAGNWDTTLWCIKPSA K Sbjct 345 VGLSDMQHPAPVLLLLAVSAGVVATGNLLPRKVSFLPGMRYYAGNWDTTLWCIKPSASAK 404 Query 420 INRGIVAIASMPAAQLERFYG-KDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDED 478 I +GIVAIASMP AQ+ER+YG KD AQI MY+GYAFRAMN+HGRA+FTLAHRAMAG DE Sbjct 405 IEKGIVAIASMPQAQMERYYGSKDAAQIYMYIGYAFRAMNTHGRAMFTLAHRAMAGQDES 464 Query 479 DYVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQE 538 +YVITDGER+CSTA+GWNFGDGH+HNEQLIAAMQ+RC F+PGEVR+VLLDAQPIHRQTQ Sbjct 465 EYVITDGERICSTAIGWNFGDGHMHNEQLIAAMQERCHFEPGEVRIVLLDAQPIHRQTQR 524 Query 539 YRLVDAATGEFERGYVRVADMVNRQPWDDDVPVHV 573 YRLVDAATGEFE GYVRVADMVNRQPWDD++PV V Sbjct 525 YRLVDAATGEFESGYVRVADMVNRQPWDDELPVQV 559 >gi|126436883|ref|YP_001072574.1| hypothetical protein Mjls_4312 [Mycobacterium sp. JLS] gi|126236683|gb|ABO00084.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=592 Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/574 (73%), Positives = 487/574 (85%), Gaps = 3/574 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL+P +P +D AEWS+G+RS+KIRPMA+HWAEVGFGTPV++HLFYV KILLY+L GWL Sbjct 1 MGFLKPDMPVVDFAEWSKGTRSEKIRPMARHWAEVGFGTPVVMHLFYVVKILLYILGGWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 L T G+DGFTD A W+ EPIVF+KVVLYTMLFEV+GLGCGFGPLNNRFFPPMGSILYW Sbjct 61 FALATHGVDGFTDVAQWWTEPIVFQKVVLYTMLFEVVGLGCGFGPLNNRFFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +R GTIRLPPWPDRVP T+G R P D ALY L+++LL ALF+DG GP+P LGT +G+L Sbjct 121 LRPGTIRLPPWPDRVPLTKGDTRTPFDAALYGALLVVLLVALFSDGTGPVPALGTEIGVL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 P WQI IL LL VLGLRDKVIFLAARGEVY + TV FLF G+DM++AAKLV + IW Sbjct 181 PLWQIWTILGLLAVLGLRDKVIFLAARGEVYGSFTVAFLFVGY-GVDMLLAAKLVCVAIW 239 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLN+HFPFVISTMMSN+PL R + +KR FF+KFP DLRPG +SR++AH ST IE Sbjct 240 MGAATSKLNKHFPFVISTMMSNHPLIRTKSLKRRFFEKFPDDLRPGRVSRVIAHFSTAIE 299 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 M VP+VL +HGGWPT +AA +M+ FH GIL+AIPMGVPLEWNVFM+F V++LFVGHA L Sbjct 300 MLVPLVLLFSHGGWPTAIAAFVMLVFHFGILSAIPMGVPLEWNVFMMFCVITLFVGHADL 359 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GLA++ P+P+ +L AV+A V GN+FPRKISFL MRYYAGNWDTT WCIKPSA +KI Sbjct 360 GLAELSTPLPV-VLFAVLALTVALGNLFPRKISFLPGMRYYAGNWDTTWWCIKPSANEKI 418 Query 421 NRGIVAIASMPAAQLERFYGK-DRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 RG+VAIASMPA+QLE+ YG ++A I +Y GYAFR NSHG+AL TL H A+AG +EDD Sbjct 419 ERGLVAIASMPASQLEKVYGSPEQAMIYLYKGYAFRGFNSHGKALLTLVHNALAGRNEDD 478 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 YVIT+GER+CSTAVGWNFGDGH+HNEQLIAAMQ+RC F+PGEVRV+LLDAQPIHRQ QEY Sbjct 479 YVITEGERLCSTAVGWNFGDGHMHNEQLIAAMQRRCQFEPGEVRVILLDAQPIHRQRQEY 538 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVHV 573 RLVDAATGEFERGYV V+DMV QPW DD+PVHV Sbjct 539 RLVDAATGEFERGYVNVSDMVTGQPWTDDIPVHV 572 >gi|315443165|ref|YP_004076044.1| hypothetical protein Mspyr1_15390 [Mycobacterium sp. Spyr1] gi|315261468|gb|ADT98209.1| hypothetical protein Mspyr1_15390 [Mycobacterium sp. Spyr1] Length=576 Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/574 (72%), Positives = 487/574 (85%), Gaps = 5/574 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL+ P +D AEWS+G+R+++I PMA+HWAEVGFGTPV++HLFYV KILLY LV WL Sbjct 1 MGFLKQDAPVVDYAEWSKGTRAERIVPMARHWAEVGFGTPVVMHLFYVVKILLYALVAWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 IVL+T GIDGFT+ A WY EPIV++KVV YTMLFE++GLGCGFGPLNNRFFPPMGS+LYW Sbjct 61 IVLSTSGIDGFTNVADWYHEPIVYQKVVFYTMLFEIVGLGCGFGPLNNRFFPPMGSVLYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +R TIRLPPWP+RVP T G R P DVALY L++ LL ALF+DG GPI E+G+ VG+L Sbjct 121 LRPRTIRLPPWPNRVPLTAGDSRTPFDVALYGALLVALLFALFSDGTGPISEIGSEVGVL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 P WQ I+ LL + GLRDKV+FLAARGEVY +L V FLF +G D+I+AAKLV LVIW Sbjct 181 PVWQTATIIGLLVLAGLRDKVLFLAARGEVYGSLAVCFLF---SGADIIIAAKLVCLVIW 237 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 IGAATSKLN+HFPFVISTMMSNNP+ RPR IKR FF+ FP DLRPG SR++AH ST IE Sbjct 238 IGAATSKLNKHFPFVISTMMSNNPVIRPRSIKRKFFEHFPDDLRPGRASRVLAHFSTAIE 297 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 M VP+VLF +HGGWPT +AA +M+ FH GIL+AIPMGVPLEWNVFM+F VL+LFVG+A + Sbjct 298 MLVPLVLFFSHGGWPTAIAAFVMLVFHFGILSAIPMGVPLEWNVFMMFSVLALFVGNAGI 357 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 G+ D+++P P+ +L AVVAG V+ GN+FPRK+SFL MRYYAGNWDTTLWC+KPSA DKI Sbjct 358 GIGDLQSPWPI-VLFAVVAGTVVIGNLFPRKVSFLPGMRYYAGNWDTTLWCVKPSASDKI 416 Query 421 NRGIVAIASMPAAQLERFYG-KDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 GIVAIASMPAAQ+E+FYG K+ A++ Y+GYAFR+ N+HGRA+FTLAHR MA +E D Sbjct 417 TNGIVAIASMPAAQMEKFYGSKETAEMYQYMGYAFRSFNTHGRAMFTLAHRLMADGNEAD 476 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 YV+TDGER+CSTA+GWNFGDGH+HNEQLIAA+Q+RC F+PGEVRV++LDAQPIH+Q QEY Sbjct 477 YVLTDGERICSTAIGWNFGDGHMHNEQLIAALQKRCHFEPGEVRVLILDAQPIHKQRQEY 536 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVHV 573 RLVDAATGEFERGYV VADMV RQPWDD VP H+ Sbjct 537 RLVDAATGEFERGYVMVADMVTRQPWDDTVPAHI 570 >gi|118472311|ref|YP_889448.1| hypothetical protein MSMEG_5202 [Mycobacterium smegmatis str. MC2 155] gi|118173598|gb|ABK74494.1| conserved membrane protein [Mycobacterium smegmatis str. MC2 155] Length=584 Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust. Identities = 412/573 (72%), Positives = 483/573 (85%), Gaps = 3/573 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL+ P +D EWS+G+R++KIRPMA+HWAEVGFGTPV LHLFYV KI LYVL WL Sbjct 1 MGFLKQTAPQVDFEEWSKGTRAEKIRPMARHWAEVGFGTPVALHLFYVVKICLYVLGAWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 +VL+T+GIDGFT A W+ EPIVFEKVVLYTML+EV+GLGCGFGPLNNRFFPPMGSILYW Sbjct 61 VVLSTRGIDGFTAVADWWTEPIVFEKVVLYTMLYEVVGLGCGFGPLNNRFFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +R TIRLPPWPDRVP T+G R D LY L+++LL A+F+DG GP+P LGT +G+L Sbjct 121 LRPKTIRLPPWPDRVPLTKGDTRTVFDAVLYGALLVVLLIAIFSDGTGPLPALGTEIGVL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 P WQI +L+LL VLGLRDKVIFLAARGEVYA+ TV FLF +G+D I+AAKLV +VIW Sbjct 181 PMWQIAAVLVLLAVLGLRDKVIFLAARGEVYASFTVAFLFAG-HGVDAILAAKLVCMVIW 239 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLN+HFPFVISTMMSNNP+ RPRFIKR FF+ FP DLRPG SR +AHVST IE Sbjct 240 LGAATSKLNKHFPFVISTMMSNNPVLRPRFIKRKFFEHFPDDLRPGRPSRWLAHVSTAIE 299 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 M VP+ LF +HGGWPT +AAT+M+CFH GIL+AIPMGVPLEWNVFMIF V +LFVGHA + Sbjct 300 MLVPLALFFSHGGWPTALAATVMICFHFGILSAIPMGVPLEWNVFMIFCVATLFVGHADV 359 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 G+ D+ +L+AV+ V GN+FPRKISFL MRYYAGNWDT+LWC+KPSA +KI Sbjct 360 GITDLST-PLPLLLLAVLVTTVTLGNLFPRKISFLPGMRYYAGNWDTSLWCVKPSAAEKI 418 Query 421 NRGIVAIASMPAAQLERFYGK-DRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 + IVAIASMPAAQ+ER+YG + AQ+ +Y+GYAFR NSHGRALFTLAHRAMAGHDE + Sbjct 419 EKNIVAIASMPAAQMERYYGSPETAQMYLYMGYAFRGFNSHGRALFTLAHRAMAGHDEGE 478 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 YV+TDGER+ STA+GWNFGDGH+ NEQL+ A+Q+RC F+PGEVR+V+LDAQPI RQTQ Y Sbjct 479 YVLTDGERIVSTAIGWNFGDGHMSNEQLVDALQKRCHFEPGEVRIVMLDAQPIQRQTQNY 538 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVH 572 RLVDAATGEFERGYV+VADMV RQPWDDDVPVH Sbjct 539 RLVDAATGEFERGYVKVADMVTRQPWDDDVPVH 571 >gi|343926347|ref|ZP_08765852.1| hypothetical protein GOALK_060_00110 [Gordonia alkanivorans NBRC 16433] gi|343763585|dbj|GAA12778.1| hypothetical protein GOALK_060_00110 [Gordonia alkanivorans NBRC 16433] Length=582 Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/574 (70%), Positives = 470/574 (82%), Gaps = 6/574 (1%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL+ PDID WSQG+R++KIRPMA+HWAEVGFGTPV LHLFYV KIL Y+L+GW Sbjct 1 MGFLKQTTPDIDFPTWSQGTRAEKIRPMARHWAEVGFGTPVALHLFYVGKILAYILIGWA 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 IV++T GIDGF WY EPIVF+KVVLYTMLFEV+G GCGFGPLNNRFFPP GSILYW Sbjct 61 IVISTPGIDGFFAVTDWYNEPIVFQKVVLYTMLFEVVGFGCGFGPLNNRFFPPFGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +R TIR PPWP R+P T G R PVDVALY L++++L ALF+ G+G +P L TTVG+L Sbjct 121 LRPKTIRQPPWP-RIPLTTGDTRTPVDVALYGALIVVVLIALFSPGSGAVPALDTTVGVL 179 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 P WQI IL LL +GLRDK +FLAARGEVY LTVTFLF +G+DMI+ AKL+FL IW Sbjct 180 PVWQIWTILALLAAIGLRDKTVFLAARGEVYGALTVTFLF---SGVDMIIGAKLMFLCIW 236 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLN+HFPFVI+TMMSNNP++R IKR FF+ FP DLRPG SR +AH ST IE Sbjct 237 LGAATSKLNKHFPFVIATMMSNNPIWRSPKIKRKFFEDFPDDLRPGRRSRWIAHFSTAIE 296 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 VP+VLF +HGGW +AA IM+ FH GIL++IPMGVPLEWNVFM+FG+L++FVGH + Sbjct 297 GLVPIVLFFSHGGWVGGIAAAIMLVFHFGILSSIPMGVPLEWNVFMMFGILAIFVGHPGI 356 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GL D+++P P+ + AV A V+ GN+ PRK+SFL MRYYAGNWDT LWCIKPSA KI Sbjct 357 GLTDLESPWPI-LFFAVSATTVVVGNLMPRKVSFLPGMRYYAGNWDTGLWCIKPSASAKI 415 Query 421 NRGIVAIASMPAAQLERFYGK-DRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 GIVAIASMPAAQLERFYG + AQIP+Y+GYAFRA NSHGRALFTLAH+AMA E+ Sbjct 416 EAGIVAIASMPAAQLERFYGSPEAAQIPLYMGYAFRAFNSHGRALFTLAHKAMAPTPEEQ 475 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 YV+TDGER+CSTA+GWNFGDGHL NEQLI ++Q+RC F+PGEVR+VLLDAQPIHRQTQEY Sbjct 476 YVLTDGERICSTAMGWNFGDGHLSNEQLIESLQRRCHFEPGEVRIVLLDAQPIHRQTQEY 535 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVHV 573 RL+D ATG FERGYVRVAD+V RQPWDD+VP V Sbjct 536 RLLDPATGIFERGYVRVADLVTRQPWDDEVPTTV 569 >gi|183983926|ref|YP_001852217.1| hypothetical protein MMAR_3954 [Mycobacterium marinum M] gi|183177252|gb|ACC42362.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=579 Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/577 (65%), Positives = 458/577 (80%), Gaps = 5/577 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGF+QP LP +D+AEWS+G+R+Q+I PMA+H AE GFGTP+++ + Y KI+LYVL WL Sbjct 1 MGFIQPNLPVVDMAEWSKGTRAQRIVPMARHIAENGFGTPLVMPVMYGIKIVLYVLGAWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 L+T GI+GF++ AW+ EPIVFEK VLYTMLFEV+GLGC FGP+ R+FPPMGSILYW Sbjct 61 FALSTSGIEGFSNVGAWWTEPIVFEKAVLYTMLFEVVGLGCCFGPMAGRYFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +R GTIRLPPWP+RVP T+GT R +V LY L+ +L+ AL +DG GPIPEL T +G+L Sbjct 121 LRPGTIRLPPWPNRVPLTKGTNRTLFEVLLYGALLALLVVALVSDGTGPIPELNTMIGVL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 P WQ V IL +L VLGLRDK+ FLAARGEVYA LT+ FLF +G D++V AKLVF+VIW Sbjct 181 PRWQPVAILSVLAVLGLRDKITFLAARGEVYAPLTLVFLF---SGSDIVVGAKLVFMVIW 237 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLN+HFPFVISTM++NNP F+KR FK++P DLRP LS +AH ST +E Sbjct 238 LGAATSKLNKHFPFVISTMLANNPFIPSGFLKRSLFKRYPDDLRPSALSDFIAHFSTAVE 297 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 VP+ LF HGGWPT +AA +MV FHL IL A PMGVPLEWNVFMIFGVL LFV HA L Sbjct 298 GLVPLALFFCHGGWPTTIAAFVMVMFHLNILLAFPMGVPLEWNVFMIFGVLWLFVAHAHL 357 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GLAD+ P P+ +L A++A +V+ GN++PR +SFL MRYYAGNWDTT WC+KPSA++KI Sbjct 358 GLADLTGPWPV-VLCALIAAVVVIGNLYPRMVSFLPGMRYYAGNWDTTQWCVKPSADEKI 416 Query 421 NRGIVAIASMPAAQLERFYG-KDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 G A+ M QLER Y K++A +P++L +AFR MN+HGRAL+TL HRA+AG+DEDD Sbjct 417 RVGARALGPMYHLQLERLYNSKEQALVPIHLAFAFRGMNTHGRALYTLVHRALAGYDEDD 476 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 Y + +GE++C+ +GWNFGDGHLHNE LI A+QQRCGF+PGEVRVV+LD+QPIH Q Q+Y Sbjct 477 YNVCEGEQLCAMVLGWNFGDGHLHNECLIEALQQRCGFEPGEVRVVILDSQPIHIQRQQY 536 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG 576 RLVDAATGEFERGYV VADM QPW DD+P+HV G Sbjct 537 RLVDAATGEFERGYVDVADMAEAQPWVDDLPIHVESG 573 >gi|41408425|ref|NP_961261.1| hypothetical protein MAP2327 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396781|gb|AAS04644.1| hypothetical protein MAP_2327 [Mycobacterium avium subsp. paratuberculosis K-10] Length=579 Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust. Identities = 367/577 (64%), Positives = 454/577 (79%), Gaps = 4/577 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGF++P LP +D+AEWS R++++ PMA+H AE GFGTP+++H+ Y AKI LYVL GWL Sbjct 1 MGFIRPNLPVVDVAEWSARPRAERLVPMARHIAENGFGTPLVMHVMYGAKIALYVLGGWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 +T+GI GFT+ AW++EPIVF+K VLYTMLFEV+GLGC FGPL R+FPPMGSILYW Sbjct 61 FAWSTRGIGGFTEVGAWWSEPIVFQKAVLYTMLFEVVGLGCCFGPLAGRYFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +R GTIRLPPWP+R+P TRG+ R P+D ALY L+++L+ AL +DG+GPIP L T +G+L Sbjct 121 LRPGTIRLPPWPNRIPLTRGSTRTPLDAALYGALLVLLVGALVSDGSGPIPALETAIGVL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 P WQ IL +L + LRDKVIFLAARGEVYA L + FLFG G D++V AK+ F+VIW Sbjct 181 PRWQTAAILGVLAAIALRDKVIFLAARGEVYAPLALVFLFG---GADVVVGAKVAFMVIW 237 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLNRHFPFVISTM++NNP +KR F+++P DLRP L+ +AH ST +E Sbjct 238 LGAATSKLNRHFPFVISTMLANNPFIPSGPLKRSMFRRYPDDLRPSALAGFIAHFSTAVE 297 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 VP+VLF + GGWPT +AA +M+ FHL IL A PMGVPLEWNVFMIFGVL LF+ HA + Sbjct 298 GLVPLVLFCSTGGWPTALAAFVMIVFHLNILLAFPMGVPLEWNVFMIFGVLWLFLAHAPV 357 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GL+ V +P P+A+L V+AG V+ GN++PRK+SFL MRYYAGNWDTTLWC++PSA++KI Sbjct 358 GLSSVADPWPIALLFVVMAGTVVVGNLYPRKVSFLPGMRYYAGNWDTTLWCVRPSADEKI 417 Query 421 NRGIVAIASMPAAQLERFYG-KDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 G A+ M QLER YG K+ IP++L AFR MN+HGRAL TLAHRAMA +DEDD Sbjct 418 RVGARALGPMQHLQLERLYGSKEETLIPLHLALAFRGMNTHGRALLTLAHRAMADYDEDD 477 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 Y + +GE +C+ +GWNFGDGHLHNE LI A+QQRCGF+PGEVRVV+LDAQPIHRQTQEY Sbjct 478 YNLCEGEVLCAMVLGWNFGDGHLHNECLIEALQQRCGFEPGEVRVVILDAQPIHRQTQEY 537 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG 576 RLVDAATGEFERGY V DM QPW DD+PV+V G Sbjct 538 RLVDAATGEFERGYCTVDDMATAQPWADDIPVYVQTG 574 >gi|296170413|ref|ZP_06852001.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894884|gb|EFG74605.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=580 Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust. Identities = 375/577 (65%), Positives = 451/577 (79%), Gaps = 4/577 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGF+QP LP +D+AEWS+ +R+++I PM +H AE GFGTP+++H+ Y KI LYVL GW+ Sbjct 1 MGFIQPNLPVVDVAEWSKLNRAERIVPMVRHIAENGFGTPLVMHVMYGVKIALYVLGGWV 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 T GI FT A W++EPIVFEK VLYTMLFEV+GLGC FGPL R+FPPMGS+LYW Sbjct 61 FGWCTTGIGRFTGVAGWWSEPIVFEKAVLYTMLFEVVGLGCCFGPLAGRYFPPMGSVLYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +R GTIRLPPWPDRVP T+GT R P+D ALYA L+++L AL +DG+GPIP L T +G+L Sbjct 121 LRPGTIRLPPWPDRVPLTQGTVRSPIDAALYAALLVLLAIALVSDGSGPIPALHTEIGVL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 W V IL +L V+GLRDKVIFLAARGEVYA L + FLF G D I+ AK+VF+VIW Sbjct 181 APWHTVTILAVLAVMGLRDKVIFLAARGEVYAPLALVFLF---TGADSIIGAKVVFMVIW 237 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLNRHFPFVISTM++NNP +KR FK++P DLRP L+ +AH ST +E Sbjct 238 LGAATSKLNRHFPFVISTMLANNPFIPSGALKRSMFKRYPDDLRPSALAGFIAHFSTAVE 297 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 VP+ L +HGGWPT +AA +MV FHL IL A PMGVPLEWNVFMIFGVLSLFV HA L Sbjct 298 GLVPLALLFSHGGWPTAIAAFVMVVFHLNILLAFPMGVPLEWNVFMIFGVLSLFVAHAGL 357 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GL+DV NP P+AIL AV+AG+V GN++PRK+SFL MRYYAGNWDTT+WC+KPS ++K Sbjct 358 GLSDVANPWPIAILFAVMAGVVAVGNLYPRKVSFLPGMRYYAGNWDTTVWCVKPSVDEKF 417 Query 421 NRGIVAIASMPAAQLERFYG-KDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 G A+ M QLER YG K++ +P++L AFR MN+HGRALFTL HRA+AG+DEDD Sbjct 418 RTGSRALGPMQHLQLERLYGSKEQTLVPLHLAMAFRGMNTHGRALFTLVHRALAGYDEDD 477 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 Y + +GE +CS +GWNFGDGH+HNE LI A+QQRC FQPGEVRVV+LDAQPIH Q QEY Sbjct 478 YNLCEGEVLCSMVLGWNFGDGHMHNECLIEALQQRCDFQPGEVRVVILDAQPIHIQRQEY 537 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG 576 RLVDAATGEFERGYV V DMV QPW DD+PVHV G Sbjct 538 RLVDAATGEFERGYVDVDDMVTSQPWADDIPVHVQSG 574 >gi|254774483|ref|ZP_05215999.1| hypothetical protein MaviaA2_07408 [Mycobacterium avium subsp. avium ATCC 25291] Length=579 Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust. Identities = 367/577 (64%), Positives = 453/577 (79%), Gaps = 4/577 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGF++P LP +D+AEWS R++++ PMA+H AE GFGTP+++H+ Y KI LYVL GWL Sbjct 1 MGFIRPNLPVVDVAEWSARPRAERLVPMARHIAENGFGTPLVMHVMYGVKIALYVLGGWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 +T+GI GF + AW++EPIVF+K VLYTMLFEV+GLGC FGPL R+FPPMGSILYW Sbjct 61 FAWSTRGIGGFAEVGAWWSEPIVFQKAVLYTMLFEVVGLGCCFGPLAGRYFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +R GTIRLPPWP+R+P TRG+ R P+D ALY L+++L+ AL +DG+GPIP L T +G+L Sbjct 121 LRPGTIRLPPWPNRIPLTRGSTRTPLDAALYGALLVLLVGALVSDGSGPIPALDTAIGVL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 P WQ IL +L V+ LRDKVIFLAARGEVYA L + FLFG G D++V AK+ F+VIW Sbjct 181 PRWQTAAILGVLAVIALRDKVIFLAARGEVYAPLALVFLFG---GADVVVGAKVAFMVIW 237 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLNRHFPFVISTM++NNP +KR F+++P DLRP L+ +AH ST +E Sbjct 238 LGAATSKLNRHFPFVISTMLANNPFIPSGPLKRSMFRRYPDDLRPSALAGFIAHFSTAVE 297 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 VP+VLF + GGWPT +AA +M+ FHL IL A PMGVPLEWNVFMIFGVL LFV HA + Sbjct 298 GLVPLVLFCSTGGWPTALAAFVMIVFHLNILLAFPMGVPLEWNVFMIFGVLWLFVAHARV 357 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GL+ V +P P+A+L V+AG V+ GN++PRK+SFL MRYYAGNWDTTLWC++PSA++KI Sbjct 358 GLSSVADPWPIALLFVVMAGTVVVGNLYPRKVSFLPGMRYYAGNWDTTLWCVRPSADEKI 417 Query 421 NRGIVAIASMPAAQLERFYG-KDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 G A+ M QLER YG K+ IP++L AFR MN+HGRAL TLAHRAMA +DEDD Sbjct 418 RVGARALGPMQHLQLERLYGSKEETLIPLHLALAFRGMNTHGRALLTLAHRAMADYDEDD 477 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 Y + +GE +C+ +GWNFGDGHLHNE LI A+QQRCGF+PGEVRVV+LDAQPIHRQTQEY Sbjct 478 YNLCEGEVLCAMVLGWNFGDGHLHNECLIEALQQRCGFEPGEVRVVILDAQPIHRQTQEY 537 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG 576 RLVDAATGEFERGY V DM QPW DD+PV+V G Sbjct 538 RLVDAATGEFERGYCTVDDMATAQPWADDIPVYVQTG 574 >gi|254823134|ref|ZP_05228135.1| hypothetical protein MintA_24610 [Mycobacterium intracellulare ATCC 13950] Length=579 Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/574 (65%), Positives = 454/574 (80%), Gaps = 4/574 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGF++P LP +D+A+WS R+++I PMA+H A+ GFGTP+++H+ Y KI LY+L GWL Sbjct 1 MGFIRPNLPVVDVADWSARPRAERIVPMARHIAQHGFGTPLVMHVMYGVKIALYILGGWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 +T+GI GFT +AW+AEPIVF+K VLYTMLFEV+GLGC FGPL R+FPPMGSILYW Sbjct 61 FAWSTRGIGGFTQVSAWWAEPIVFQKAVLYTMLFEVVGLGCCFGPLAGRYFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +R GTIRLPPWPDRVP T+G+ R PVD LY +L+ +L+ AL +DG GPIP L T +G+L Sbjct 121 LRPGTIRLPPWPDRVPLTKGSNRTPVDALLYGILLALLVFALLSDGTGPIPALDTAIGVL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 P WQ V +L +L ++ LRDKVIFLAARGEVYA L +TFLF G D++V AK+VF+VIW Sbjct 181 PRWQTVAVLAVLALISLRDKVIFLAARGEVYAPLALTFLFA---GADIVVGAKVVFMVIW 237 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLN+HFPFVISTM++NNP +KR FK++P DLRP L+ +AH ST +E Sbjct 238 LGAATSKLNKHFPFVISTMLANNPFIPSGPLKRSMFKRYPDDLRPSALAGFIAHFSTAVE 297 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 VP+VL +HGGWPT +AA +M+ FHL IL A PMGVPLEWNVFMIFGVL LFV HA L Sbjct 298 GLVPLVLLFSHGGWPTALAAFVMIVFHLNILLAFPMGVPLEWNVFMIFGVLWLFVTHAPL 357 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GL+++ NP P+ IL AV+AG V AGN++PRK+SFL MRYYAGNWDTTLWC++PSA++K Sbjct 358 GLSNIGNPWPIGILFAVMAGTVAAGNLYPRKVSFLPGMRYYAGNWDTTLWCVRPSADEKF 417 Query 421 NRGIVAIASMPAAQLERFYG-KDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 G A+ M QLER YG K+ +P++L AFR MN+HGRAL TLAHRAMA +DEDD Sbjct 418 RVGSRALGPMQHLQLERLYGSKEETLVPLHLALAFRGMNTHGRALLTLAHRAMADYDEDD 477 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 Y + +GE +CS +GWNFGDGH+HNE LI A+QQRCGF+PGEVRVV+LDAQPIHRQ QEY Sbjct 478 YNLCEGEVLCSMVLGWNFGDGHMHNECLIEALQQRCGFEPGEVRVVILDAQPIHRQRQEY 537 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVHV 573 RLVDAATGEFERGY VADMV QPW D++PV+V Sbjct 538 RLVDAATGEFERGYCEVADMVVNQPWADNIPVYV 571 >gi|118462498|ref|YP_880889.1| hypothetical protein MAV_1654 [Mycobacterium avium 104] gi|118163785|gb|ABK64682.1| conserved membrane protein [Mycobacterium avium 104] Length=579 Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust. Identities = 367/577 (64%), Positives = 453/577 (79%), Gaps = 4/577 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGF++P LP +D+AEWS R++++ PMA+H AE GFGTP+++H+ Y KI LYVL GWL Sbjct 1 MGFIRPNLPVVDVAEWSARPRAERLVPMARHIAENGFGTPLVMHVMYGVKIALYVLGGWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 +T+GI GFT+ AW++EPIVF+K VLYTMLFEV+GLGC FGPL R+FPPMGSILYW Sbjct 61 FAWSTRGIGGFTEVGAWWSEPIVFQKAVLYTMLFEVVGLGCCFGPLAGRYFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +R GTIRLPPWP+R+P TR + R P+D ALY L+++L+ AL +DG+GPIP L T +G+L Sbjct 121 LRPGTIRLPPWPNRIPLTRCSTRTPLDAALYGALLVLLVGALVSDGSGPIPALDTAIGVL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 P WQ IL +L V+ LRDKVIFLAARGEVYA L + FLFG G D++V AK+ F+VIW Sbjct 181 PRWQTAAILGVLAVIALRDKVIFLAARGEVYAPLALVFLFG---GADVVVGAKVAFMVIW 237 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLNRHFPFVISTM++NNP +KR F+++P DLRP L+ +AH ST +E Sbjct 238 LGAATSKLNRHFPFVISTMLANNPFIPSGPLKRSMFRRYPDDLRPSALAGFIAHFSTAVE 297 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 VP+VLF + GGWPT +AA +M+ FHL IL A PMGVPLEWNVFMIFGVL LFV HA + Sbjct 298 GLVPLVLFCSTGGWPTALAAFVMIVFHLNILLAFPMGVPLEWNVFMIFGVLWLFVAHAPV 357 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GL+ V +P P+A+L V+AG V+ GN++PRK+SFL MRYYAGNWDTTLWC++PSA++KI Sbjct 358 GLSSVADPWPIALLFVVMAGTVVVGNLYPRKVSFLPGMRYYAGNWDTTLWCVRPSADEKI 417 Query 421 NRGIVAIASMPAAQLERFYG-KDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 G A+ M QLER YG K+ IP++L AFR MN+HGRAL TLAHRAMA +DEDD Sbjct 418 RVGARALGPMQHLQLERLYGSKEETLIPLHLALAFRGMNTHGRALLTLAHRAMADYDEDD 477 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 Y + +GE +C+ +GWNFGDGHLHNE LI A+QQRCGF+PGEVRVV+LDAQPIHRQTQEY Sbjct 478 YNLCEGEVLCAMVLGWNFGDGHLHNECLIEALQQRCGFEPGEVRVVILDAQPIHRQTQEY 537 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG 576 RLVDAATGEFERGY V DM QPW DD+PV+V G Sbjct 538 RLVDAATGEFERGYCNVDDMATAQPWADDIPVYVQTG 574 >gi|336461001|gb|EGO39881.1| Transmembrane protein of unknown function (DUF3556) [Mycobacterium avium subsp. paratuberculosis S397] Length=579 Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/577 (64%), Positives = 453/577 (79%), Gaps = 4/577 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGF++P LP +D+AEWS R++++ PMA+H AE GFGTP+++H+ Y KI LYVL GWL Sbjct 1 MGFIRPNLPVVDVAEWSARPRAERLVPMARHIAENGFGTPLVMHVMYGVKIALYVLGGWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 +T+GI GFT+ AW++EPIVF+K VLYTMLFEV+GLGC FGPL R+FPPMGSILYW Sbjct 61 FAWSTRGIGGFTEVGAWWSEPIVFQKAVLYTMLFEVVGLGCCFGPLAGRYFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +R GTIRLPPWP+R+P TRG+ R P+D ALY L+++L+ AL +DG+GPIP L T +G+L Sbjct 121 LRPGTIRLPPWPNRIPLTRGSTRTPLDAALYGALLVLLVGALVSDGSGPIPALETAIGVL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 P WQ IL +L + LRDKVIFLAARGEVYA L + FLFG G D++V AK+ F+VIW Sbjct 181 PRWQTAAILGVLAAIALRDKVIFLAARGEVYAPLALVFLFG---GADVVVGAKVAFMVIW 237 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLNRHFPFVISTM++NNP +KR F+++P DLRP L+ +AH ST +E Sbjct 238 LGAATSKLNRHFPFVISTMLANNPFIPSGPLKRSMFRRYPDDLRPSALAGFIAHFSTAVE 297 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 VP+VLF + GGWPT +AA +M+ FHL IL A PMGVPLEWNVFMIFGVL LF+ HA + Sbjct 298 GLVPLVLFCSTGGWPTALAAFVMIVFHLNILLAFPMGVPLEWNVFMIFGVLWLFLAHAPV 357 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GL+ V +P P+A+L V+AG V+ GN++PRK+SFL MRYYAGNWDTTLWC++PSA++KI Sbjct 358 GLSSVADPWPIALLFVVMAGTVVVGNLYPRKVSFLPGMRYYAGNWDTTLWCVRPSADEKI 417 Query 421 NRGIVAIASMPAAQLERFYG-KDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 G A+ M QLER YG K+ IP++L AFR MN+HGRAL TLAHRAMA +DEDD Sbjct 418 RVGARALGPMQHLQLERLYGSKEETLIPLHLALAFRGMNTHGRALLTLAHRAMADYDEDD 477 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 Y + +GE +C+ +GWNFGDGHLHNE LI A+QQRCGF+PGEVRVV+LDAQPIHRQTQEY Sbjct 478 YNLCEGEVLCAMVLGWNFGDGHLHNECLIEALQQRCGFEPGEVRVVILDAQPIHRQTQEY 537 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG 576 RLVDAATGEFERGY V DM QPW DD+PV+V G Sbjct 538 RLVDAATGEFERGYCTVDDMATAQPWADDIPVYVQTG 574 >gi|118619046|ref|YP_907378.1| hypothetical protein MUL_3809 [Mycobacterium ulcerans Agy99] gi|118571156|gb|ABL05907.1| conserved hypothetical membrane protein [Mycobacterium ulcerans Agy99] Length=579 Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/577 (63%), Positives = 449/577 (78%), Gaps = 5/577 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGF+QP LP +D+AEWS+G+R+Q+I PMA+H AE GFGTP+++ + Y I+LY+L WL Sbjct 1 MGFIQPNLPIVDMAEWSKGTRAQRIVPMARHIAENGFGTPLVMPVMYGINIVLYILGAWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 L+T G++GF++ AW+ EPIVFEK VLYTMLFEV+GLGC FGP+ R+FPPMGSILYW Sbjct 61 FALSTSGVEGFSNVGAWWTEPIVFEKAVLYTMLFEVVGLGCCFGPMAGRYFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +R GTIRLPPWP+RVP T+GT R +V LY L+ +L+ AL +DG GPIPE T +G+L Sbjct 121 LRPGTIRLPPWPNRVPLTKGTNRTLFEVLLYGALLALLVVALVSDGTGPIPERNTMIGVL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 P WQ V IL +L VLGLRDK+ FLAA GEVYA LT+ FL +G D++V AKLVF+VIW Sbjct 181 PRWQPVAILSVLAVLGLRDKITFLAAHGEVYAPLTLVFL---CSGSDIVVGAKLVFIVIW 237 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 +GAATSKLN+HFPFVISTM++NNP F+KR FK++P DLRP LS +AH ST +E Sbjct 238 LGAATSKLNKHFPFVISTMLANNPFIPSGFLKRSLFKRYPDDLRPSTLSDFIAHFSTAVE 297 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 VP+ LF HGGWPT +AA +MV FHL IL A PMGVPLEWNVFMIFGVL LFV HA L Sbjct 298 GLVPLALFFCHGGWPTTIAAFVMVMFHLNILLAFPMGVPLEWNVFMIFGVLWLFVAHAHL 357 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 GLAD+ P P+ +L A++A +V+ GN++PR +SFL MRYYAGNWD T WC+KPSA++KI Sbjct 358 GLADLTGPWPV-VLCALIAAVVVIGNLYPRMVSFLPGMRYYAGNWDATQWCVKPSADEKI 416 Query 421 NRGIVAIASMPAAQLERFYG-KDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDD 479 A+ M QLER Y K++A +P++L +AFR MN+HGRAL+TL HRA+AG+DEDD Sbjct 417 RVSARALGPMYHLQLERLYNSKEQALVPIHLAFAFRGMNTHGRALYTLVHRALAGYDEDD 476 Query 480 YVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEY 539 Y + +GE++C+ +GWNFGDGHLHNE LI A+QQRCGF+PGEVRVV+LD+QPI Q Q+Y Sbjct 477 YNVCEGEQLCAMVLGWNFGDGHLHNECLIEALQQRCGFEPGEVRVVILDSQPIQTQRQQY 536 Query 540 RLVDAATGEFERGYVRVADMVNRQPWDDDVPVHVLPG 576 RLVDAATGEFERGYV A+M PW DD+P+HV G Sbjct 537 RLVDAATGEFERGYVDAANMAEAHPWVDDLPIHVESG 573 >gi|289569128|ref|ZP_06449355.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289542882|gb|EFD46530.1| conserved membrane protein [Mycobacterium tuberculosis T17] Length=474 Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/347 (99%), Positives = 346/347 (99%), Gaps = 0/347 (0%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFLQP LPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL Sbjct 1 MGFLQPGLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW Sbjct 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL Sbjct 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW Sbjct 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE Sbjct 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMI 347 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTA+PMGVPLEWNVFMI Sbjct 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAVPMGVPLEWNVFMI 347 >gi|29827886|ref|NP_822520.1| hypothetical protein SAV_1345 [Streptomyces avermitilis MA-4680] gi|29604987|dbj|BAC69055.1| putative membrane protein [Streptomyces avermitilis MA-4680] Length=580 Score = 553 bits (1426), Expect = 2e-155, Method: Compositional matrix adjust. Identities = 284/571 (50%), Positives = 380/571 (67%), Gaps = 13/571 (2%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL P + D+D+ +W Q+IRP+A+HWA GFGTP ++HL Y+ KI Y L G Sbjct 1 MGFLAPNMADVDIRQWRTRPYQQRIRPLAEHWAGHGFGTPGIVHLLYLVKITAYALGGIA 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 +V T G+ G +W+AEP+V++K+V++T+L+EV+GLGCG GPL++ F PP+G+ L+W Sbjct 61 VVSLTPGVGGIAHFGSWWAEPLVYQKLVVWTLLYEVLGLGCGSGPLSSHFLPPVGAFLHW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +R GT+RLPPWPDR+P+T GT+R DV LYA ++ L G+ Sbjct 121 LRPGTVRLPPWPDRIPFTSGTRRTAADVTLYAAVLGAAGWLLCAP------GGPGAAGVA 174 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 W++ ++ L +LGLRDK +FLAAR E Y + FLF DM A KL+ L +W Sbjct 175 APWRVAVLAAALALLGLRDKTVFLAARAEHYGLTLLVFLF---PAADMTAALKLIMLALW 231 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVIE 300 GAATSKLNRHFPFV++ M+SN+PL RP ++KR ++ +P DLRP L+ AH TVIE Sbjct 232 WGAATSKLNRHFPFVVAVMISNSPL-RPAWLKRRLYRHYPDDLRPSGLAAAAAHGGTVIE 290 Query 301 MCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHACL 360 VP+VL ++HGG T VA +MV FHL I++ PMGVPLEWNVF I+ L LF A + Sbjct 291 YVVPLVLVLSHGGTVTTVALAVMVVFHLHIMSTFPMGVPLEWNVFFIYSALVLFGHDAAV 350 Query 361 GLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI 420 G + +P A+L+ + + + G+V P +SFL +MRYYAGNW T LWC + E ++ Sbjct 351 GAFALHSPALAAVLVLSLVMVPVLGHVRPDLVSFLPSMRYYAGNWATGLWCFRKGTEHRL 410 Query 421 NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDY 480 N IV + +P QL R YG D A++ ++ G A+RAM+SHGRAL L RA+ D + Y Sbjct 411 NEHIVKASGLPVDQLTRLYGADTAELVLHQGLAWRAMHSHGRALVGLLPRAV--DDVESY 468 Query 481 VITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYR 540 + +GE V +GWNFGDGHLHNEQL+AA+QQRCGF PGE+RVVLL++QP HR Q YR Sbjct 469 DVREGEMVAGAVLGWNFGDGHLHNEQLVAAVQQRCGFAPGELRVVLLESQPTHRSRQHYR 528 Query 541 LVDAATGEFERGYVRVADMVNRQPW-DDDVP 570 +VDAA+G E GYV V DMV RQPW DDD P Sbjct 529 IVDAASGLIEEGYVNVRDMVVRQPWLDDDTP 559 >gi|311744358|ref|ZP_07718160.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] gi|311312324|gb|EFQ82239.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] Length=584 Score = 541 bits (1393), Expect = 2e-151, Method: Compositional matrix adjust. Identities = 286/577 (50%), Positives = 377/577 (66%), Gaps = 12/577 (2%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGF+ P LPD+D EWS+ S++++P+AQHW E GFGTP ++L YV KI LYV Sbjct 1 MGFVAPDLPDLDHDEWSRRPYSERLKPLAQHWVEHGFGTPSAIYLVYVLKIGLYVAGAAW 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 + T G+ G D W+ +PIV++K+V++T+LFEV G GCG+GPL +RF PPMG+ LYW Sbjct 61 FISMTPGLGGLGDIDVWWDQPIVYQKLVVWTLLFEVAGFGCGWGPLTSRFVPPMGAFLYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +R GTIRL PWPD+VP T GT R DVALYA ++ + L G G G TVGLL Sbjct 121 LRPGTIRLAPWPDKVPGTGGTTRTWFDVALYAGVLGTAVWLLAQPGDGVAVTAGDTVGLL 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVY-ATLTVTFLFGRLNGIDMIVAAKLVFLVI 239 + ++ LG+LGLRDK IFLAARGE Y TL V F L +DMI+A KLV L + Sbjct 181 DPVAALPLIATLGLLGLRDKTIFLAARGEQYWVTLFVFF----LPFVDMIIAFKLVMLAL 236 Query 240 WIGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHVSTVI 299 W GAATSKLN HFP V++ MMSN+PL R R++KR ++ P DL+P + R +AHV T + Sbjct 237 WWGAATSKLNHHFPHVVAVMMSNSPLIRSRWVKRKMYRNAPDDLQPSAIPRTMAHVGTAV 296 Query 300 EMCVPVVL-FVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFVGHA 358 E VP L F+ GG T A MV FHL IL+ +PMGVPLEWNVF IF + LF + Sbjct 297 EYLVPAYLVFLGDGGTLTWAALIFMVVFHLHILSTVPMGVPLEWNVFFIFSLFYLFGTYG 356 Query 359 CLGLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAED 418 + D+ P L +LI +V G+ + GNV P K+SFL AMRYYAGNW T+ W K AE Sbjct 357 ETQIWDMTTPATLLVLIPLV-GLPLLGNVRPEKVSFLPAMRYYAGNWATSAWYFKGDAEQ 415 Query 419 KINRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDED 478 +++ + + +P QL Y + Q+ + A+R+++SHGRA L R + D D Sbjct 416 RMDAALTTTSPLPVDQLRMLYPDETVQLFLAKVMAWRSLHSHGRAHAGLTRRIIG--DGD 473 Query 479 DYVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQE 538 + + DGE V A+GWNFG+GHLHN QL+AA+Q+RC F+PGE+ V++L++QPI QTQ+ Sbjct 474 GWTVRDGEIVAGYALGWNFGEGHLHNGQLLAAVQERCDFEPGELVVMVLESQPIQTQTQQ 533 Query 539 YRLVDAATGEFERGYVRVADMVNRQPW---DDDVPVH 572 YR+ DA G E GYVRV+DM++RQPW D PVH Sbjct 534 YRVYDANLGLLEEGYVRVSDMLSRQPWPEAGDVFPVH 570 >gi|296170702|ref|ZP_06852277.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894691|gb|EFG74425.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=593 Score = 525 bits (1351), Expect = 1e-146, Method: Compositional matrix adjust. Identities = 284/584 (49%), Positives = 376/584 (65%), Gaps = 14/584 (2%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGF+ P LPD+D W R+ +++ + +HWAE GFGTP ++L Y+ KI LY+ V Sbjct 1 MGFMTPDLPDVDRETWPTLPRATRLQIVTRHWAEHGFGTPSAVYLLYLTKIALYIAVPAA 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 I+ T G+ G A W+ +PIV++KV+++T+LFEV GLGCG GPL RF PP+G ILYW Sbjct 61 IISLTPGLGGLGRIADWWTQPIVYQKVIVFTLLFEVTGLGCGSGPLTGRFMPPIGGILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +R TIRLP WP +VP+T G R VDVALYA+++ L AL + G G VGL+ Sbjct 121 LRPNTIRLPAWPGKVPFTAGDNRTIVDVALYAIVLAGGLWALLSPGHGGPATAAGDVGLI 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 +++ ++ L VLGLRDK IFLAARGE Y + F F D I A KL+ L++W Sbjct 181 DPVRVIPTIVALAVLGLRDKTIFLAARGEHYWLKLLVFFFPF---TDQIAAYKLIMLLLW 237 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPRF---IKRMFFKKFPGDLRPGLLSRIVAHV-S 296 GAATSKLN HFP+V+S M SNN L RP+ IK M ++ DLRP L + +AHV Sbjct 238 WGAATSKLNHHFPYVVSVMTSNNALLRPKLFNPIKHMLYRDHINDLRPTWLPKAMAHVGG 297 Query 297 TVIEMCVPVVLFVAHGGWP-TVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFV 355 T E VP VL G P MV FHL I++ +PMGVPLEWNVF IF + LF Sbjct 298 TTAEFVVPTVLVFFAGDHPWRWFLIGFMVIFHLNIISNLPMGVPLEWNVFFIFSLFYLFG 357 Query 356 GHACLGLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPS 415 +A + D+++P+ L L+ +VIAGN+FP+KISFL AMRYYAGNW +++WC + Sbjct 358 HYASVQATDLRSPL-LWALVVAALAVVIAGNMFPKKISFLPAMRYYAGNWASSVWCFRAG 416 Query 416 AEDKINRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGH 475 AE+K++ +V +++ QL R Y + A+I AFRAM+ HGRAL L RA+ Sbjct 417 AEEKVDAEVVKSSALVINQLARLYDPETAEIMADKTAAFRAMHVHGRALNALVPRAI--D 474 Query 476 DEDDYVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQ 535 DE +Y I +GE V VGWNFG+GHLHNEQL+ A+Q+RC F+ G+VRV++L+ QPIH Q Sbjct 475 DEANYKIREGEIVAGPLVGWNFGEGHLHNEQLLEAVQRRCHFEDGDVRVIVLEGQPIHIQ 534 Query 536 TQEYRLVDAATGEFERGYVRVADMVNRQPW---DDDVPVHVLPG 576 Q YR+ DA G E GYV VADM+ RQPW D++PVHV+ G Sbjct 535 KQWYRIFDAKAGLIEEGYVNVADMLARQPWPEPGDELPVHVIDG 578 >gi|342858726|ref|ZP_08715381.1| hypothetical protein MCOL_07611 [Mycobacterium colombiense CECT 3035] gi|342134430|gb|EGT87610.1| hypothetical protein MCOL_07611 [Mycobacterium colombiense CECT 3035] Length=586 Score = 523 bits (1347), Expect = 4e-146, Method: Compositional matrix adjust. Identities = 284/585 (49%), Positives = 379/585 (65%), Gaps = 12/585 (2%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGF+ P PD+D W RS + + M +HW E GFG+P ++LFYV KI Y + Sbjct 1 MGFMAPEFPDVDPQTWLSLPRSTRRQIMTRHWVEHGFGSPYAVYLFYVFKIAGYAVGAAA 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 ++ T G+ G A W+ +PIV++K+V++T+LFE++GLGCG GPL RF+PP G LYW Sbjct 61 VISLTPGLGGLGHLADWWTQPIVYQKLVVFTLLFEILGLGCGSGPLTARFWPPFGGFLYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLL 180 +R TIRLP WPD+VP+TRG +R VDV LY +++ + AL + G G VGL+ Sbjct 121 LRPNTIRLPAWPDKVPFTRGDRRTVVDVGLYLVVLASGVWALLSPGRGGPVTGACDVGLI 180 Query 181 PAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIW 240 +V ++ L +LGLRDK +FLAARGE Y + F FG D I A K++ L +W Sbjct 181 DPMLVVPAIVALALLGLRDKTVFLAARGEHYGLTLLVFFFGF---TDQIAAFKIIMLALW 237 Query 241 IGAATSKLNRHFPFVISTMMSNNPLFRPR---FIKRMFFKKFPGDLRPGLLSRIVAHV-S 296 GAATSKLN HFP+V++ MMSN+PL R R + KR + DLRP + +++AHV Sbjct 238 WGAATSKLNHHFPYVVAVMMSNSPLLRGRAFNWFKRRLYLDPIDDLRPSWIPKVMAHVGG 297 Query 297 TVIEMCVPVVL-FVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLFV 355 T E VP+VL FVA G MV FHL I + IPMGVPLEWNVF IF + LF Sbjct 298 TTAEFLVPLVLVFVADGHRWAWFLIAFMVLFHLNITSTIPMGVPLEWNVFFIFSLFYLFG 357 Query 356 GHACLGLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPS 415 +A + A + +P+ L ILI +A + I GN+FP++ISFL AMRYYAGNW T+ WC++ Sbjct 358 HYAGVTAAGLSSPLLLVILIVALAVVPIMGNLFPQQISFLPAMRYYAGNWATSTWCLRRG 417 Query 416 AEDKINRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAM-AG 474 EDKI I +++ QL R Y A++ + A+R+M++HGRAL L RA+ AG Sbjct 418 TEDKIEANITKASALAPNQLARLYDPQTAELMIDKLMAWRSMHTHGRALGGLVPRALPAG 477 Query 475 HDEDDYVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHR 534 DE DY + DGE + +GWNFG+GHLHNEQL+AA+Q+RC F G+VRV++L+AQPIHR Sbjct 478 ADEADYRLRDGEIIAGPLIGWNFGEGHLHNEQLLAAVQRRCDFGDGDVRVIILEAQPIHR 537 Query 535 QTQEYRLVDAATGEFERGYVRVADMVNRQPW---DDDVPVHVLPG 576 QTQ YR+VDA +G E GYV VA M++RQPW DD PVHV+ G Sbjct 538 QTQAYRIVDAKSGLIEEGYVDVAAMLSRQPWPEPGDDYPVHVISG 582 >gi|254775788|ref|ZP_05217304.1| hypothetical protein MaviaA2_14120 [Mycobacterium avium subsp. avium ATCC 25291] Length=581 Score = 522 bits (1345), Expect = 6e-146, Method: Compositional matrix adjust. Identities = 288/583 (50%), Positives = 382/583 (66%), Gaps = 14/583 (2%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGF+ P PD+D W+ RS + + M +HW E GFG+P ++LFYV KI YV Sbjct 1 MGFMTPEFPDVDPQTWTGLPRSTRRQIMTRHWVEHGFGSPYAVYLFYVFKIAGYVAGAAA 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 ++ T G+ G A W+ +PIV++K+V++T+LFE++GLGCG GPL RF+PP G LYW Sbjct 61 VISLTPGLGGLGRIADWWTQPIVYQKLVVFTLLFEILGLGCGSGPLTARFWPPFGGFLYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDG-AGPIPELGTTVGL 179 +R TIRLPPWPD+VP+T G R VDVALY +++ ++AL + G GP+ G VGL Sbjct 121 LRPNTIRLPPWPDKVPFTAGDSRTVVDVALYLVVLGSGVAALLSPGRGGPVTAAG-DVGL 179 Query 180 LPAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVI 239 + +V ++ L +LGLRDK+IFLAARGE Y + F FG D I A K++ L + Sbjct 180 IDPILVVPAIVALALLGLRDKMIFLAARGEHYGLTLLVFFFGF---TDQIAAFKIIMLAL 236 Query 240 WIGAATSKLNRHFPFVISTMMSNNPLFRPR---FIKRMFFKKFPGDLRPGLLSRIVAHV- 295 W GAATSKLN HFP+V++ MMSN+PL R R + KR F+ DLRP + +++AHV Sbjct 237 WWGAATSKLNHHFPYVVAVMMSNSPLLRARAFNWFKRRFYLDPVDDLRPSWIPKVMAHVG 296 Query 296 STVIEMCVPVVL-FVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLF 354 T E VP+VL FVA G MV FHL I + IPMGVPLEWNVF IF + LF Sbjct 297 GTTAEFLVPLVLVFVADGHRWAWFLIAFMVLFHLNIASTIPMGVPLEWNVFFIFSLFYLF 356 Query 355 VGHACLGLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKP 414 +A + + +P+ L ILIA +A + I GN+FP++ISFL AMRYYAGNW T+ WC + Sbjct 357 GHYAGVTATGLSSPLLLVILIAALAVVPILGNLFPQQISFLPAMRYYAGNWATSTWCFRT 416 Query 415 SAEDKINRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAM-A 473 AEDKI I +++ QL R Y A++ + +R+M++HGRAL L RA+ Sbjct 417 GAEDKIEANITKASALVPNQLARLYDPQSAELMIDKLMGWRSMHTHGRALGGLVPRALPG 476 Query 474 GHDEDDYVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIH 533 G DE DY++ DGE V +GWNFG+GHLHNEQL+AA+Q+RC F GEVRV++L+AQPI Sbjct 477 GADEADYLLRDGEIVAGPLIGWNFGEGHLHNEQLLAAVQRRCNFDEGEVRVIILEAQPIQ 536 Query 534 RQTQEYRLVDAATGEFERGYVRVADMVNRQPW---DDDVPVHV 573 RQTQ YR+VDA TG E G+V VA M++RQPW D+ PVHV Sbjct 537 RQTQAYRIVDAKTGLIEAGHVDVASMLSRQPWPEPGDEYPVHV 579 >gi|240171802|ref|ZP_04750461.1| hypothetical protein MkanA1_20980 [Mycobacterium kansasii ATCC 12478] Length=588 Score = 519 bits (1337), Expect = 5e-145, Method: Compositional matrix adjust. Identities = 281/583 (49%), Positives = 375/583 (65%), Gaps = 15/583 (2%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGF+ P LPD D A W R+ +++ + +HW E GFGTP +L Y+ KI +Y+ Sbjct 1 MGFMSPELPDADPATWQTLPRATRLQIVTRHWVEHGFGTPYAAYLLYLFKIGVYIAAPAA 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 I+ T G+ G A W+ +PIV++KV+++T+LFEV+G GCG GPL RF PP+G LYW Sbjct 61 IISLTPGLGGLGHIADWWTQPIVYQKVIIFTLLFEVMGFGCGSGPLTGRFLPPVGGFLYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDG-AGPIPELGTTVGL 179 +R TIRLP WPD+VP+TRG R VDV LYA+++ + AL + G GP+ G VGL Sbjct 121 LRPKTIRLPAWPDKVPFTRGDSRTLVDVILYAVVLAGGVWALVSPGHGGPVTGAG-DVGL 179 Query 180 LPAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVI 239 + ++ ++ L +LGLRDK IFLAARGE Y F F D I A KL+ L + Sbjct 180 IDPVLVIPTIVALALLGLRDKTIFLAARGEHYWLKLFVFFFPF---TDQIAAFKLIMLAL 236 Query 240 WIGAATSKLNRHFPFVISTMMSNNPLFRPR---FIKRMFFKKFPGDLRPGLLSRIVAHV- 295 W GAATSKLN HFP+V+S M SNN L R R ++K + + DLRP L +++AHV Sbjct 237 WWGAATSKLNHHFPYVVSVMTSNNALLRSRLFNWLKHLLYLDPVNDLRPSWLPKLMAHVG 296 Query 296 STVIEMCVP-VVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLF 354 T E VP V++FVA G MV FHL IL+ +PMGVPLEWNVF IF + LF Sbjct 297 GTTAEFLVPGVLVFVADGHPWRWFLIGFMVIFHLNILSNLPMGVPLEWNVFFIFSLFYLF 356 Query 355 VGHACLGLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKP 414 + + +++P+ L ++ + +AGN+FP KISFL AMRYYAGNW T++WC +P Sbjct 357 GHYGAIQATGLQSPL-LLAIVLAAVAVAVAGNLFPEKISFLPAMRYYAGNWATSVWCFRP 415 Query 415 SAEDKINRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAG 474 AE+K+ +V +++ QL R YG D A+I M AFRAM++HGRAL L RA+ G Sbjct 416 GAEEKLEANVVKSSALVVNQLTRLYGADSAEIMMDKTAAFRAMHTHGRALNGLVSRAVGG 475 Query 475 H-DEDDYVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIH 533 DE DY + +GE + VGWNFG+GHLHNEQL+AA+Q+RC F+ G++RVV+L+ QPIH Sbjct 476 DVDETDYRVREGELIAGPLVGWNFGEGHLHNEQLLAAVQRRCNFEAGDIRVVILEGQPIH 535 Query 534 RQTQEYRLVDAATGEFERGYVRVADMVNRQPW---DDDVPVHV 573 Q Q YR+VDA G E GYV V DM++RQPW D+ PVHV Sbjct 536 VQKQWYRIVDAKAGVLETGYVEVKDMLSRQPWPEAGDEFPVHV 578 >gi|118464229|ref|YP_882525.1| hypothetical protein MAV_3343 [Mycobacterium avium 104] gi|118165516|gb|ABK66413.1| conserved membrane protein [Mycobacterium avium 104] Length=581 Score = 519 bits (1337), Expect = 5e-145, Method: Compositional matrix adjust. Identities = 287/583 (50%), Positives = 380/583 (66%), Gaps = 14/583 (2%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGF+ P PD+D W+ RS + + M +HW E GFG+P ++LFYV KI YV Sbjct 1 MGFMTPEFPDVDPQTWTGLPRSTRRQIMTRHWVEHGFGSPYAVYLFYVFKIAGYVAGAAA 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 ++ T G+ G A W+ +PIV++K+V++T+LFE++GLGCG GPL RF+PP G LYW Sbjct 61 VISLTPGLGGLGRIADWWTQPIVYQKLVVFTLLFEILGLGCGSGPLTARFWPPFGGFLYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDG-AGPIPELGTTVGL 179 +R TIRLPPWPD+VP+T G R VDVALY +++ ++AL + G GP+ G VGL Sbjct 121 LRPNTIRLPPWPDKVPFTAGDSRTVVDVALYLVVLGSGVAALLSPGRGGPVTAAG-DVGL 179 Query 180 LPAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVI 239 + +V ++ L +LGLRDK IFLAARGE Y + F FG D I A K++ L + Sbjct 180 IDPVLVVPAIVALALLGLRDKTIFLAARGEHYGLTLLVFFFGF---TDQIAAFKIIMLAL 236 Query 240 WIGAATSKLNRHFPFVISTMMSNNPLFRPR---FIKRMFFKKFPGDLRPGLLSRIVAHV- 295 W GAATSKLN HFP+V++ MMSN+PL R R + KR + DLRP + +++AHV Sbjct 237 WWGAATSKLNHHFPYVVAVMMSNSPLLRARAFNWFKRRLYLDPVDDLRPSWIPKVMAHVG 296 Query 296 STVIEMCVPVVL-FVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLF 354 T E VP+VL FVA G MV FHL I + IPMGVPLEWNVF IF + LF Sbjct 297 GTTAEFLVPLVLVFVADGHRWAWFLIAFMVLFHLNIASTIPMGVPLEWNVFFIFSLFYLF 356 Query 355 VGHACLGLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKP 414 +A + + +P+ L ILIA +A + I GN+FP++ISFL AMRYYAGNW T+ WC + Sbjct 357 GHYAGVTATGLSSPLLLVILIAALAVVPILGNLFPQQISFLPAMRYYAGNWATSTWCFRR 416 Query 415 SAEDKINRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAM-A 473 AEDKI I +++ QL R Y A++ + +R+M++HGRAL L RA+ Sbjct 417 GAEDKIEANITKASALVPNQLARLYDPQSAELMIDKLMGWRSMHTHGRALGGLVPRALPG 476 Query 474 GHDEDDYVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIH 533 G DE DY++ DGE V +GWNFG+GHLHNEQL+AA+Q+RC F GEVRV++L+AQPI Sbjct 477 GADEADYLLRDGEIVAGPLIGWNFGEGHLHNEQLLAAVQRRCNFDEGEVRVIILEAQPIQ 536 Query 534 RQTQEYRLVDAATGEFERGYVRVADMVNRQPW---DDDVPVHV 573 RQTQ YR+VDA TG E G+V VA M++RQPW D+ PVHV Sbjct 537 RQTQAYRIVDAKTGLIEAGHVDVASMLSRQPWPEPGDEYPVHV 579 >gi|41407260|ref|NP_960096.1| hypothetical protein MAP1162 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395612|gb|AAS03479.1| hypothetical protein MAP_1162 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336457989|gb|EGO36976.1| Transmembrane protein of unknown function (DUF3556) [Mycobacterium avium subsp. paratuberculosis S397] Length=581 Score = 519 bits (1336), Expect = 7e-145, Method: Compositional matrix adjust. Identities = 286/583 (50%), Positives = 380/583 (66%), Gaps = 14/583 (2%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGF+ P PD+D W+ RS + + M +HW E GFG+P ++LFYV KI Y+ Sbjct 1 MGFMTPEFPDVDPQTWTGLPRSTRRQIMTRHWVEHGFGSPYAVYLFYVFKIAGYIAGAAA 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 ++ T G+ G A W+ +PIV++K+V++T+LFE++GLGCG GPL RF+PP G LYW Sbjct 61 VISLTPGLGGLGRIADWWTQPIVYQKLVVFTLLFEILGLGCGSGPLTARFWPPFGGFLYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDG-AGPIPELGTTVGL 179 +R TIRLPPWPD+VP+T G R VDVALY +++ ++AL + G GP+ G VGL Sbjct 121 LRPNTIRLPPWPDKVPFTAGDSRTVVDVALYLVVLGSGVAALLSPGRGGPVTAAG-DVGL 179 Query 180 LPAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVI 239 + +V ++ L +LGLRDK IFLAARGE Y + F FG D I A K++ L + Sbjct 180 IDPVLVVPAIVALALLGLRDKTIFLAARGEHYGLTLLVFFFGF---TDQIAAFKIIMLAL 236 Query 240 WIGAATSKLNRHFPFVISTMMSNNPLFRPR---FIKRMFFKKFPGDLRPGLLSRIVAHV- 295 W GAATSKLN HFP+V++ MMSN+PL R R + KR + DLRP + +++AHV Sbjct 237 WWGAATSKLNHHFPYVVAVMMSNSPLLRARAFNWFKRRLYLDPVDDLRPSWIPKVMAHVG 296 Query 296 STVIEMCVPVVL-FVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLF 354 T E VP+VL FVA G MV FHL I + IPMGVPLEWNVF IF + LF Sbjct 297 GTTAEFLVPLVLVFVADGHRWAWFLIAFMVLFHLNIASTIPMGVPLEWNVFFIFSLFYLF 356 Query 355 VGHACLGLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKP 414 +A + + +P+ L ILIA +A + I GN+FP++ISFL AMRYYAGNW T+ WC + Sbjct 357 GHYAGVTATGLSSPLLLGILIAALAVVPILGNLFPQQISFLPAMRYYAGNWATSTWCFRR 416 Query 415 SAEDKINRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAM-A 473 AEDKI I +++ QL R Y A++ + +R+M++HGRAL L RA+ Sbjct 417 GAEDKIEANITKASALVPNQLARLYDPQSAELMIDKLMGWRSMHTHGRALGGLVPRALPG 476 Query 474 GHDEDDYVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIH 533 G DE DY++ DGE V +GWNFG+GHLHNEQL+AA+Q+RC F GEVRV++L+AQPI Sbjct 477 GADEADYLLRDGEIVAGPLIGWNFGEGHLHNEQLLAAVQRRCNFDEGEVRVIILEAQPIQ 536 Query 534 RQTQEYRLVDAATGEFERGYVRVADMVNRQPW---DDDVPVHV 573 RQTQ YR+VDA TG E G+V VA M++RQPW D+ PVHV Sbjct 537 RQTQAYRIVDARTGLIEAGHVDVASMLSRQPWPEPGDEYPVHV 579 >gi|254818397|ref|ZP_05223398.1| hypothetical protein MintA_00642 [Mycobacterium intracellulare ATCC 13950] Length=581 Score = 513 bits (1321), Expect = 4e-143, Method: Compositional matrix adjust. Identities = 281/584 (49%), Positives = 375/584 (65%), Gaps = 18/584 (3%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGF+ P LPD+D + W R+ +++ + +HWAE GFGTP ++L Y+ KI LYV Sbjct 1 MGFMSPELPDVDRSAWPTLPRATRLQVVTRHWAEHGFGTPYAVYLLYLLKIALYVAAPAA 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 I+ T G+ G W+ +PIV++KVV++T+LFEV GLGCG GPL RF PP+G ILYW Sbjct 61 IIALTPGLGGLGRIGDWWTQPIVYQKVVIFTLLFEVTGLGCGSGPLTGRFMPPIGGILYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDG-AGPIPELGTTVGL 179 +R TIRLP WP +VP+TRG R DVALYA++++ + AL + G GP+ G VGL Sbjct 121 LRPNTIRLPAWPGKVPFTRGDTRTAFDVALYAIVLIGGVWALLSPGHGGPVTTAG-DVGL 179 Query 180 LPAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVI 239 + +++ ++ L +LGLRDK +FLAARGE Y F F D + A KL+ L + Sbjct 180 IDPVRVIPTIVALALLGLRDKTVFLAARGEHYWLKLFVFFF---PFTDQVAACKLIMLCL 236 Query 240 WIGAATSKLNRHFPFVISTMMSNNPLFRPRF---IKRMFFKKFPGDLRPGLLSRIVAHV- 295 W GAA SKLN HFP+V++ M SNN L R R +K + + DLRP LL +++AHV Sbjct 237 WWGAAVSKLNHHFPYVVAVMTSNNALLRSRVFTPLKHLLYLDHVNDLRPSLLPKLMAHVG 296 Query 296 STVIEMCVPVVL--FVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSL 353 T E VP +L F A W + MV FHL I++ +PMGVPLEWNVF IF + L Sbjct 297 GTTAEFVVPTILVFFAADHPWRWFLIG-FMVLFHLNIISNLPMGVPLEWNVFFIFSLFYL 355 Query 354 FVGHACLGLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIK 413 F + + D+++PV L L+ + +VI GN+FP KISFL AMRYYAGNW T++WC + Sbjct 356 FGHYGAVRATDLRSPV-LLALVILAVVVVIVGNMFPEKISFLPAMRYYAGNWATSVWCFR 414 Query 414 PSAEDKINRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMA 473 AE+KI+ IV +++ QL R Y + A+I AFRAM+ HGRAL L RA+ Sbjct 415 AGAEEKIDADIVKSSALVVNQLARLYDPETAEILADKIAAFRAMHVHGRALNGLLPRAI- 473 Query 474 GHDEDDYVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIH 533 DE DY I +GE V VGWNFG+GHLHNEQL+ A+Q+RC F+ G++RV++L+ QPIH Sbjct 474 -DDEADYKIREGEIVAGPLVGWNFGEGHLHNEQLVEAVQRRCRFEDGDLRVIVLEGQPIH 532 Query 534 RQTQEYRLVDAATGEFERGYVRVADMVNRQPW---DDDVPVHVL 574 Q Q YR++DA TG E GYV V DM+ RQPW DD PVHV+ Sbjct 533 VQRQSYRILDAKTGLIEAGYVDVKDMLTRQPWPEPGDDCPVHVI 576 >gi|183982249|ref|YP_001850540.1| hypothetical protein MMAR_2236 [Mycobacterium marinum M] gi|183175575|gb|ACC40685.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=582 Score = 509 bits (1312), Expect = 4e-142, Method: Compositional matrix adjust. Identities = 277/582 (48%), Positives = 373/582 (65%), Gaps = 16/582 (2%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGF+ P LPD+D W R+ +++ + +HWAE GFGTP ++L Y+ KI +YV Sbjct 1 MGFMSPDLPDVDHETWHTLPRATRLQVVTRHWAEHGFGTPYAVYLLYLLKIGIYVAAPAA 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 I+ T G+ G A W+ +PIV++KV+++T+LFEV+G GCG GPL RF PP+G LYW Sbjct 61 IISLTPGLGGLGHIADWWTQPIVYQKVIIFTLLFEVLGFGCGSGPLTGRFMPPVGGFLYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDG-AGPIPELGTTVGL 179 +R TIRLPPWP +VP+T G R VDV LYA++++ ALF+ G AGP+ G VGL Sbjct 121 LRPKTIRLPPWPAKVPFTDGDTRTVVDVTLYAIVLISGGWALFSPGHAGPVTASG-DVGL 179 Query 180 LPAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVI 239 + +V ++ L +LGLRDK +FLAARGE Y + F F D I A K++ L + Sbjct 180 IDPILVVPTIIALALLGLRDKTVFLAARGEHYWLKLLVFFFPF---TDQIAAFKIIMLCL 236 Query 240 WIGAATSKLNRHFPFVISTMMSNNPLFRPRF---IKRMFFKKFPGDLRPGLLSRIVAHV- 295 W GAATSKLN HFP+V++ M SNN L R R IK + ++ DLRP L +I+AHV Sbjct 237 WWGAATSKLNHHFPYVVAVMTSNNALLRGRLFNPIKHLLYRDHVNDLRPSWLPKIMAHVG 296 Query 296 STVIEMCVPVVLFVAHGGWP-TVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVLSLF 354 T E VP VL + G P MV FHL IL+ +PMGVPLEWNVF IF + LF Sbjct 297 GTTAEFLVPAVLVLVAGDQPWRWFLIGFMVIFHLNILSNLPMGVPLEWNVFFIFSLFYLF 356 Query 355 VGHACLGLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKP 414 + + D+++P+ L ++ +V+AGN+FP KISFL AMRYYAGNW T++WC + Sbjct 357 GHYGSIRAIDLRSPL-LLAIVLAAVAVVVAGNLFPEKISFLPAMRYYAGNWATSVWCFRA 415 Query 415 SAEDKINRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAG 474 AE+KI +V +++ QL + Y + A+I AFRAM++HGRAL L RA+ Sbjct 416 GAEEKIEASVVKSSALVVNQLAKLYDANTAEIMADKTAAFRAMHTHGRALNGLLPRAIG- 474 Query 475 HDEDDYVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHR 534 +E +Y + +GE V VGWNFG+GHLHNEQL+ A+Q+RC F G++RV++L+ QPIH Sbjct 475 -NEAEYKVREGEIVAGPLVGWNFGEGHLHNEQLVQAVQRRCNFADGDLRVIILEGQPIHI 533 Query 535 QTQEYRLVDAATGEFERGYVRVADMVNRQPW---DDDVPVHV 573 Q Q YR+VDA TG E GYV V DM+ RQPW D+ PVHV Sbjct 534 QKQWYRIVDAKTGLIEAGYVTVEDMLARQPWPEPGDEFPVHV 575 >gi|340626445|ref|YP_004744897.1| hypothetical protein MCAN_14471 [Mycobacterium canettii CIPT 140010059] gi|340004635|emb|CCC43779.1| conserved membrane protein [Mycobacterium canettii CIPT 140010059] Length=589 Score = 499 bits (1285), Expect = 5e-139, Method: Compositional matrix adjust. Identities = 280/585 (48%), Positives = 375/585 (65%), Gaps = 18/585 (3%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL+P LPD+D W R +++ + +HW E GFGTP ++L Y+ KI +YV G Sbjct 1 MGFLKPDLPDVDHDTWLTQPRRTRLQVVTRHWVEHGFGTPYAVYLLYLTKIAVYVAAGAA 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 I+ T G+ G + W+ +PIV++KV+++T+LFEV+G GCG GPL RF+PP+G LYW Sbjct 61 IISLTPGLGGLSRIGDWWTQPIVYQKVIVFTLLFEVLGFGCGSGPLTGRFWPPIGGFLYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTT---- 176 +R TIRLP WPD+VP+T+G R VDVALYA++++ + AL + G+ T Sbjct 121 LRPNTIRLPAWPDKVPFTQGDTRTVVDVALYAIVLIGGVWALLSPGSPGPGGTPVTAAGD 180 Query 177 VGLLPAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVF 236 VGL+ +V ++ LGVLGLRDK IFLAARGE Y F F D I A K++ Sbjct 181 VGLINPVLVVPTIVALGVLGLRDKTIFLAARGEPYWLKLFVFFFPF---TDQIAAFKIIM 237 Query 237 LVIWIGAATSKLNRHFPFVISTMMSNNPLFRPRF---IKRMFFKKFPGDLRPGLLSRIVA 293 L +W GAATSKLN HFP+V++ M SNN L R R IK + ++ DLRP L +++A Sbjct 238 LCLWWGAATSKLNHHFPYVVAVMTSNNALLRSRVFNPIKHLLYRDHANDLRPSWLPKLMA 297 Query 294 H-VSTVIEMCVPVVLFVAHGGWP-TVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVL 351 H T E VP +L + G P MV FHL IL+ +PMGVPLEWNVF IF + Sbjct 298 HGGGTTAEFLVPGILVLVADGHPWRWFLIGFMVLFHLNILSNLPMGVPLEWNVFFIFSLC 357 Query 352 SLFVGHACLGLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWC 411 LF + + D+++P+ LAI+IAVVA +++ GN+ P KISFL AMRYYAGNW T++WC Sbjct 358 YLFGHYGAITATDLRSPLLLAIVIAVVAVVIM-GNLLPEKISFLPAMRYYAGNWATSIWC 416 Query 412 IKPSAEDKINRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRA 471 + AE + +V +++ QL + Y A+I AFRAM++HGRAL L RA Sbjct 417 FRGDAEATMETSVVKSSALVVNQLAKLYDGATAEIMTDKVAAFRAMHTHGRALNGLLPRA 476 Query 472 MAGHDEDDYVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQP 531 + DE Y I +GE V VGWNFG+GHLHNEQL+AA+Q+RC F G++RV++L+ QP Sbjct 477 L--DDEAHYRIREGEIVAGPLVGWNFGEGHLHNEQLVAAVQRRCNFADGDLRVIILEGQP 534 Query 532 IHRQTQEYRLVDAATGEFERGYVRVADMVNRQPW---DDDVPVHV 573 IH Q Q YR+VDA TG FE GYV V DM++RQPW D+ PVHV Sbjct 535 IHVQKQWYRIVDAKTGLFEAGYVTVEDMLSRQPWPEPGDEFPVHV 579 >gi|31792625|ref|NP_855118.1| hypothetical protein Mb1466 [Mycobacterium bovis AF2122/97] gi|121637361|ref|YP_977584.1| hypothetical protein BCG_1492 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989836|ref|YP_002644523.1| hypothetical protein JTY_1467 [Mycobacterium bovis BCG str. Tokyo 172] gi|31618214|emb|CAD94327.1| CONSERVED MEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] gi|121493008|emb|CAL71479.1| Conserved membrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772949|dbj|BAH25755.1| hypothetical protein JTY_1467 [Mycobacterium bovis BCG str. Tokyo 172] gi|341601380|emb|CCC64053.1| conserved membrane protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=589 Score = 496 bits (1277), Expect = 4e-138, Method: Compositional matrix adjust. Identities = 279/585 (48%), Positives = 374/585 (64%), Gaps = 18/585 (3%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL+P LPD+D W R +++ + + W E GFGTP ++L Y+ KI +YV G Sbjct 1 MGFLKPDLPDVDHDTWLTQPRRTRLQVVTRDWVEHGFGTPYAVYLLYLTKIAVYVAAGAA 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 I+ T G+ G + W+ +PIV++KV+++T+LFEV+G GCG GPL RF+PP+G LYW Sbjct 61 IISLTPGLGGLSRIGDWWTQPIVYQKVIVFTLLFEVLGFGCGSGPLTGRFWPPIGGFLYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTT---- 176 +R TIRLP WPD+VP+T+G R VDVALYA++++ + AL + G+ T Sbjct 121 LRPNTIRLPAWPDKVPFTQGDTRTVVDVALYAIVLIGGVWALLSPGSPGPGGTPVTAAGD 180 Query 177 VGLLPAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVF 236 VGL+ +V ++ LGVLGLRDK IFLAARGE Y F F D I A K++ Sbjct 181 VGLINPVLVVPTIVALGVLGLRDKTIFLAARGEHYWLKLFVFFFPF---TDQIAAFKIIM 237 Query 237 LVIWIGAATSKLNRHFPFVISTMMSNNPLFRPRF---IKRMFFKKFPGDLRPGLLSRIVA 293 L +W GAATSKLN HFP+V++ M SNN L R R IK + ++ DLRP L +++A Sbjct 238 LCLWWGAATSKLNHHFPYVVAVMTSNNALLRSRVFNPIKHLLYRDHANDLRPSWLPKLMA 297 Query 294 H-VSTVIEMCVPVVLFVAHGGWP-TVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVL 351 H T E VP +L + G P MV FHL IL+ +PMGVPLEWNVF IF + Sbjct 298 HGGGTTAEFLVPGILVLVADGHPWRWFLIGFMVLFHLNILSNLPMGVPLEWNVFFIFSLC 357 Query 352 SLFVGHACLGLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWC 411 LF + + D+++P+ LAI+IAVVA +++ GN+ P KISFL AMRYYAGNW T++WC Sbjct 358 YLFGHYGAITATDLRSPLLLAIVIAVVAVVIM-GNLLPEKISFLPAMRYYAGNWATSIWC 416 Query 412 IKPSAEDKINRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRA 471 + AE + +V +++ QL + Y A+I AFRAM++HGRAL L RA Sbjct 417 FRGDAEATMETSVVKSSALVVNQLAKLYDGATAEIMTDQVAAFRAMHTHGRALNGLLPRA 476 Query 472 MAGHDEDDYVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQP 531 + DE Y I +GE V VGWNFG+GHLHNEQL+AA+Q+RC F G++RV++L+ QP Sbjct 477 L--DDEAHYRIREGEIVAGPLVGWNFGEGHLHNEQLVAAVQRRCNFADGDLRVIILEGQP 534 Query 532 IHRQTQEYRLVDAATGEFERGYVRVADMVNRQPW---DDDVPVHV 573 IH Q Q YR+VDA TG FE GYV V DM++RQPW D+ PVHV Sbjct 535 IHVQKQWYRIVDAKTGLFEAGYVTVEDMLSRQPWPEPGDEFPVHV 579 >gi|289442876|ref|ZP_06432620.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289569451|ref|ZP_06449678.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289574100|ref|ZP_06454327.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] 19 more sequence titles Length=589 Score = 496 bits (1276), Expect = 6e-138, Method: Compositional matrix adjust. Identities = 279/585 (48%), Positives = 374/585 (64%), Gaps = 18/585 (3%) Query 1 MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWL 60 MGFL+P LPD+D W R +++ + + W E GFGTP ++L Y+ KI +YV G Sbjct 1 MGFLKPDLPDVDHDTWLTQPRRTRLQVVTRDWVEHGFGTPYAVYLLYLTKIAVYVAAGAA 60 Query 61 IVLTTKGIDGFTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYW 120 I+ T G+ G + W+ +PIV++KV+++T+LFEV+G GCG GPL RF+PP+G LYW Sbjct 61 IISLTPGLGGLSRIGDWWTQPIVYQKVIVFTLLFEVLGFGCGSGPLTGRFWPPIGGFLYW 120 Query 121 MRFGTIRLPPWPDRVPWTRGTKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTT---- 176 +R TIRLP WPD+VP+T+G R VDVALYA++++ + AL + G+ T Sbjct 121 LRPNTIRLPAWPDKVPFTQGDTRTVVDVALYAIVLIGGVWALLSPGSPGPGGTPVTAAGD 180 Query 177 VGLLPAWQIVLILLLLGVLGLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVF 236 VGL+ +V ++ LGVLGLRDK IFLAARGE Y F F D I A K++ Sbjct 181 VGLINPVLVVPTIVALGVLGLRDKTIFLAARGEHYWLKLFVFFFPF---TDQIAAFKIIM 237 Query 237 LVIWIGAATSKLNRHFPFVISTMMSNNPLFRPRF---IKRMFFKKFPGDLRPGLLSRIVA 293 L +W GAATSKLN HFP+V++ M SNN L R R IK + ++ DLRP L +++A Sbjct 238 LCLWWGAATSKLNHHFPYVVAVMTSNNALLRSRVFNPIKHLLYRDHANDLRPSWLPKLMA 297 Query 294 H-VSTVIEMCVPVVLFVAHGGWP-TVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGVL 351 H T E VP +L + G P MV FHL IL+ +PMGVPLEWNVF IF + Sbjct 298 HGGGTTAEFLVPGILVLVADGHPWRWFLIGFMVLFHLNILSNLPMGVPLEWNVFFIFSLC 357 Query 352 SLFVGHACLGLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWC 411 LF + + D+++P+ LAI+IAVVA +++ GN+ P KISFL AMRYYAGNW T++WC Sbjct 358 YLFGHYGAITATDLRSPLLLAIVIAVVAVVIM-GNLLPEKISFLPAMRYYAGNWATSIWC 416 Query 412 IKPSAEDKINRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRA 471 + AE + +V +++ QL + Y A+I AFRAM++HGRAL L RA Sbjct 417 FRGDAEATMETSVVKSSALVVNQLAKLYDGATAEIMTDKVAAFRAMHTHGRALNGLLPRA 476 Query 472 MAGHDEDDYVITDGERVCSTAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQP 531 + DE Y I +GE V VGWNFG+GHLHNEQL+AA+Q+RC F G++RV++L+ QP Sbjct 477 L--DDEAHYRIREGEIVAGPLVGWNFGEGHLHNEQLVAAVQRRCNFADGDLRVIILEGQP 534 Query 532 IHRQTQEYRLVDAATGEFERGYVRVADMVNRQPW---DDDVPVHV 573 IH Q Q YR+VDA TG FE GYV V DM++RQPW D+ PVHV Sbjct 535 IHVQKQWYRIVDAKTGLFEAGYVTVEDMLSRQPWPEPGDEFPVHV 579 Lambda K H 0.328 0.144 0.463 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1297990237818 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40