BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1144
Length=250
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608284|ref|NP_215660.1| short-chain type dehydrogenase/redu... 488 4e-136
gi|240172480|ref|ZP_04751139.1| short-chain type dehydrogenase/r... 440 8e-122
gi|183984277|ref|YP_001852568.1| short-chain type dehydrogenase/... 435 3e-120
gi|118616739|ref|YP_905071.1| short-chain type dehydrogenase/red... 434 6e-120
gi|296170033|ref|ZP_06851637.1| 3-hydroxyacyl-CoA dehydrogenase ... 414 5e-114
gi|41408735|ref|NP_961571.1| hypothetical protein MAP2637c [Myco... 408 5e-112
gi|336458776|gb|EGO37736.1| dehydrogenase of unknown specificity... 405 3e-111
gi|118468032|ref|YP_889429.1| 3-hydroxyacyl-CoA dehydrogenase [M... 405 3e-111
gi|333989763|ref|YP_004522377.1| short-chain dehydrogenase [Myco... 404 8e-111
gi|342861758|ref|ZP_08718404.1| 3-hydroxyacyl-CoA dehydrogenase ... 400 7e-110
gi|254820697|ref|ZP_05225698.1| 3-hydroxyacyl-CoA dehydrogenase ... 398 3e-109
gi|108801032|ref|YP_641229.1| short-chain dehydrogenase/reductas... 388 4e-106
gi|145222715|ref|YP_001133393.1| short-chain dehydrogenase/reduc... 382 3e-104
gi|120405529|ref|YP_955358.1| short-chain dehydrogenase/reductas... 380 1e-103
gi|226309110|ref|YP_002769070.1| 3-hydroxyacyl-CoA dehydrogenase... 380 1e-103
gi|229491638|ref|ZP_04385459.1| 3-hydroxyacyl-coa dehydrogenase ... 378 4e-103
gi|312138197|ref|YP_004005533.1| 3-hydroxy-2-methylbutyryl-CoA d... 371 6e-101
gi|111025231|ref|YP_707651.1| short chain dehydrogenase [Rhodoco... 363 1e-98
gi|111020935|ref|YP_703907.1| 3-hydroxyacyl-CoA dehydrogenase [R... 362 3e-98
gi|288924059|ref|ZP_06418119.1| short-chain dehydrogenase/reduct... 360 9e-98
gi|54312032|dbj|BAD66658.1| 3-Hydroxyacyl-CoA dehydrogenase [Myc... 359 2e-97
gi|300785743|ref|YP_003766034.1| 3-hydroxyacyl-CoA dehydrogenase... 357 8e-97
gi|311743448|ref|ZP_07717254.1| 3-hydroxyacyl-CoA dehydrogenase ... 352 3e-95
gi|333921887|ref|YP_004495468.1| putative short chain dehydrogen... 352 4e-95
gi|226363231|ref|YP_002781013.1| 3-hydroxyacyl-CoA dehydrogenase... 351 7e-95
gi|134099983|ref|YP_001105644.1| short-chain dehydrogenase/reduc... 351 7e-95
gi|288917011|ref|ZP_06411382.1| short-chain dehydrogenase/reduct... 350 1e-94
gi|111222531|ref|YP_713325.1| 3-hydroxyacyl-CoA dehydrogenase [F... 348 4e-94
gi|86740262|ref|YP_480662.1| short-chain dehydrogenase/reductase... 347 8e-94
gi|312199515|ref|YP_004019576.1| short-chain dehydrogenase/reduc... 346 2e-93
gi|54024393|ref|YP_118635.1| putative short chain dehydrogenase ... 345 3e-93
gi|297162055|gb|ADI11767.1| putative short chain dehydrogenase [... 337 1e-90
gi|324997654|ref|ZP_08118766.1| putative short chain dehydrogena... 336 2e-90
gi|111224169|ref|YP_714963.1| putative oxidoreductase [Frankia a... 334 8e-90
gi|296141781|ref|YP_003649024.1| short-chain dehydrogenase/reduc... 329 2e-88
gi|331697779|ref|YP_004334018.1| 3-hydroxy-2-methylbutyryl-CoA d... 328 3e-88
gi|297154086|gb|ADI03798.1| putative short chain dehydrogenase [... 323 2e-86
gi|336179316|ref|YP_004584691.1| 3-hydroxy-2-methylbutyryl-CoA d... 321 8e-86
gi|77404553|ref|YP_345129.1| putative 3-hydroxyacyl-CoA dehydrog... 321 8e-86
gi|297189984|ref|ZP_06907382.1| 3-hydroxyacyl-CoA dehydrogenase ... 316 2e-84
gi|111020381|ref|YP_703353.1| 3-hydroxyacyl-CoA dehydrogenase [R... 313 1e-83
gi|333919401|ref|YP_004492982.1| putative 3-hydroxyacyl-CoA dehy... 313 2e-83
gi|302546884|ref|ZP_07299226.1| short-chain dehydrogenase/reduct... 312 2e-83
gi|88856493|ref|ZP_01131151.1| 3-hydroxyacyl-CoA dehydrogenase [... 306 2e-81
gi|325962069|ref|YP_004239975.1| dehydrogenase of unknown specif... 305 3e-81
gi|260904165|ref|ZP_05912487.1| short-chain dehydrogenase/reduct... 304 8e-81
gi|149180891|ref|ZP_01859393.1| 3-hydroxyacyl-CoA dehydrogenase ... 300 1e-79
gi|220911515|ref|YP_002486824.1| short-chain dehydrogenase/reduc... 299 3e-79
gi|335039687|ref|ZP_08532839.1| short-chain dehydrogenase/reduct... 298 5e-79
gi|119962904|ref|YP_946556.1| 3-hydroxyacyl-CoA dehydrogenase [A... 298 5e-79
>gi|15608284|ref|NP_215660.1| short-chain type dehydrogenase/reductase [Mycobacterium tuberculosis
H37Rv]
gi|15840585|ref|NP_335622.1| short chain dehydrogenase/reductase family oxidoreductase [Mycobacterium
tuberculosis CDC1551]
gi|31792339|ref|NP_854832.1| short-chain type dehydrogenase/reductase [Mycobacterium bovis
AF2122/97]
80 more sequence titles
Length=250
Score = 488 bits (1255), Expect = 4e-136, Method: Compositional matrix adjust.
Identities = 250/250 (100%), Positives = 250/250 (100%), Gaps = 0/250 (0%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDDVVGGLGDRARFAQADVTDE 60
MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDDVVGGLGDRARFAQADVTDE
Sbjct 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDDVVGGLGDRARFAQADVTDE 60
Query 61 AAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVLRL 120
AAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVLRL
Sbjct 61 AAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVLRL 120
Query 121 GAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASKLIR 180
GAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASKLIR
Sbjct 121 GAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASKLIR 180
Query 181 VVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGEVIR 240
VVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGEVIR
Sbjct 181 VVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGEVIR 240
Query 241 LDGAIRMAPR 250
LDGAIRMAPR
Sbjct 241 LDGAIRMAPR 250
>gi|240172480|ref|ZP_04751139.1| short-chain type dehydrogenase/reductase [Mycobacterium kansasii
ATCC 12478]
Length=250
Score = 440 bits (1132), Expect = 8e-122, Method: Compositional matrix adjust.
Identities = 222/250 (89%), Positives = 237/250 (95%), Gaps = 0/250 (0%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDDVVGGLGDRARFAQADVTDE 60
M+ +DAVAVVTGGASGLGLATTKRLLDAGAQVVV+DLRGDDVV LGDRARFAQADVTDE
Sbjct 1 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDLRGDDVVAELGDRARFAQADVTDE 60
Query 61 AAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVLRL 120
AAV+ AL+LA+SLGP+R+VVNCAGTGNAIRVL RDGVFPLAAFRK+VDINLVGTFNVLRL
Sbjct 61 AAVTGALDLAESLGPLRIVVNCAGTGNAIRVLGRDGVFPLAAFRKVVDINLVGTFNVLRL 120
Query 121 GAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASKLIR 180
GAERIAKTEPIGEERGVI+NTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLA LIR
Sbjct 121 GAERIAKTEPIGEERGVIVNTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLAGHLIR 180
Query 181 VVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGEVIR 240
V+TIAPGLFDTPLLA LP A+ SLG+QVPHPSRLG+PDEY AL +HIIENPMLNGEVIR
Sbjct 181 VMTIAPGLFDTPLLAGLPEPARESLGKQVPHPSRLGSPDEYAALAVHIIENPMLNGEVIR 240
Query 241 LDGAIRMAPR 250
LDGAIRMAPR
Sbjct 241 LDGAIRMAPR 250
>gi|183984277|ref|YP_001852568.1| short-chain type dehydrogenase/reductase [Mycobacterium marinum
M]
gi|183177603|gb|ACC42713.1| short-chain type dehydrogenase/reductase [Mycobacterium marinum
M]
Length=253
Score = 435 bits (1118), Expect = 3e-120, Method: Compositional matrix adjust.
Identities = 220/253 (87%), Positives = 240/253 (95%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDDVVGGLGDRARFAQADVTDE 60
M+ +DAVAVVTGGASGLGLATTKRLLDAGAQVVV+D+RG+DVV LGDRARFA ADVTDE
Sbjct 1 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGDRARFAAADVTDE 60
Query 61 AAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVLRL 120
AAV++AL+LA+++G +R+VVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVG+FNVLRL
Sbjct 61 AAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGSFNVLRL 120
Query 121 GAERIAKTEPIG---EERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
AERIAKTEP+G EERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLAS
Sbjct 121 AAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASH 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
IRV+TIAPGLFDTPLLASLP EA+ASLG+QVPHPSRLG+PDEYGAL +HIIENPMLNGE
Sbjct 181 RIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGSPDEYGALAVHIIENPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
VIRLDGAIRMAPR
Sbjct 241 VIRLDGAIRMAPR 253
>gi|118616739|ref|YP_905071.1| short-chain type dehydrogenase/reductase [Mycobacterium ulcerans
Agy99]
gi|118568849|gb|ABL03600.1| short-chain type dehydrogenase/reductase [Mycobacterium ulcerans
Agy99]
Length=253
Score = 434 bits (1116), Expect = 6e-120, Method: Compositional matrix adjust.
Identities = 220/253 (87%), Positives = 239/253 (95%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDDVVGGLGDRARFAQADVTDE 60
M+ +DAVAVVTGGASGLGLATTKRLLDAGAQVVV+D+RG+DVV LGDRARFA ADVTDE
Sbjct 1 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGDRARFAAADVTDE 60
Query 61 AAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVLRL 120
AAV++AL+LA+++G +R+VVNCAGTGNAIRVLSRDGVF LAAFRKIVDINLVG+FNVLRL
Sbjct 61 AAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRL 120
Query 121 GAERIAKTEPIG---EERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
AERIAKTEP+G EERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLAS
Sbjct 121 AAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASH 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
IRV+TIAPGLFDTPLLASLP EA+ASLG+QVPHPSRLGNPDEYGAL +HIIENPMLNGE
Sbjct 181 RIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHIIENPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
VIRLDGAIRMAPR
Sbjct 241 VIRLDGAIRMAPR 253
>gi|296170033|ref|ZP_06851637.1| 3-hydroxyacyl-CoA dehydrogenase FadB2x [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895301|gb|EFG75010.1| 3-hydroxyacyl-CoA dehydrogenase FadB2x [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=250
Score = 414 bits (1065), Expect = 5e-114, Method: Compositional matrix adjust.
Identities = 204/250 (82%), Positives = 230/250 (92%), Gaps = 0/250 (0%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDDVVGGLGDRARFAQADVTDE 60
M+ KDAVAVVTGGASGLGLATTKRLLDAGAQVVV+DLRG++ V LG+RARF QADVTDE
Sbjct 1 MEIKDAVAVVTGGASGLGLATTKRLLDAGAQVVVIDLRGEEAVRELGERARFVQADVTDE 60
Query 61 AAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVLRL 120
AAV AL++A+SLGP+R+ VNCAG GNAI+ LS+DG FPL AF+K++ +NL+GTFNVLRL
Sbjct 61 AAVGKALDVAESLGPLRINVNCAGIGNAIKTLSKDGPFPLDAFKKVIGVNLIGTFNVLRL 120
Query 121 GAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASKLIR 180
AERIAKTEPIGEERGVIINTASVAAF+GQIGQAAYSASKGGVVGMTLPIARDL+ +LIR
Sbjct 121 AAERIAKTEPIGEERGVIINTASVAAFEGQIGQAAYSASKGGVVGMTLPIARDLSRELIR 180
Query 181 VVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGEVIR 240
VVTIAPGLF TPLL SLP EA+ SLG+QVPHP+RLG+PDEYGAL +HI+ENPMLNGEVIR
Sbjct 181 VVTIAPGLFKTPLLGSLPEEAQKSLGKQVPHPARLGDPDEYGALAVHIVENPMLNGEVIR 240
Query 241 LDGAIRMAPR 250
LDGAIRMAPR
Sbjct 241 LDGAIRMAPR 250
>gi|41408735|ref|NP_961571.1| hypothetical protein MAP2637c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118465282|ref|YP_880530.1| 3-hydroxyacyl-CoA dehydrogenase [Mycobacterium avium 104]
gi|254774161|ref|ZP_05215677.1| 3-hydroxyacyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
ATCC 25291]
gi|41397093|gb|AAS04954.1| hypothetical protein MAP_2637c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118166569|gb|ABK67466.1| 3-Hydroxyacyl-CoA dehydrogenase [Mycobacterium avium 104]
Length=254
Score = 408 bits (1048), Expect = 5e-112, Method: Compositional matrix adjust.
Identities = 206/254 (82%), Positives = 228/254 (90%), Gaps = 4/254 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDDVVGGLGDRARFAQADVTDE 60
M+ KDAVAVVTGGASGLGLATTKRLLD GAQVVV+DLRG+D V LGDRARF QADVTDE
Sbjct 1 MEIKDAVAVVTGGASGLGLATTKRLLDRGAQVVVIDLRGEDAVRELGDRARFVQADVTDE 60
Query 61 AAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVLRL 120
AAV AL+ A+S+GP+R+ VNCAG GNAI+ LS+DG FPL AF+K+V +NL+GTFNVLRL
Sbjct 61 AAVGKALDTAESMGPLRINVNCAGIGNAIKTLSKDGPFPLDAFKKVVGVNLIGTFNVLRL 120
Query 121 GAERIAKTEPIGE----ERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLAS 176
AERIAKTEPIG ERGVIINTASVAAF+GQIGQAAYSASKGGVVGMTLPIARDLA
Sbjct 121 AAERIAKTEPIGPGTSPERGVIINTASVAAFEGQIGQAAYSASKGGVVGMTLPIARDLAR 180
Query 177 KLIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNG 236
+LIRVVTIAPGLF TPLL SLP EA+ASLG+QVPHP+RLG+PDEYGAL +HI+ENPMLNG
Sbjct 181 ELIRVVTIAPGLFKTPLLGSLPEEAQASLGKQVPHPARLGDPDEYGALAVHIVENPMLNG 240
Query 237 EVIRLDGAIRMAPR 250
EVIRLDGAIRMAPR
Sbjct 241 EVIRLDGAIRMAPR 254
>gi|336458776|gb|EGO37736.1| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase
like protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=254
Score = 405 bits (1041), Expect = 3e-111, Method: Compositional matrix adjust.
Identities = 205/254 (81%), Positives = 227/254 (90%), Gaps = 4/254 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDDVVGGLGDRARFAQADVTDE 60
M+ KDAVAVVTGGASGLGLATTKRLLD GAQVVV+DLRG+D V LGDRARF QADV DE
Sbjct 1 MEIKDAVAVVTGGASGLGLATTKRLLDRGAQVVVIDLRGEDAVRELGDRARFVQADVADE 60
Query 61 AAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVLRL 120
AAV AL+ A+S+GP+R+ VNCAG GNAI+ LS+DG FPL AF+K+V +NL+GTFNVLRL
Sbjct 61 AAVGKALDTAESMGPLRINVNCAGIGNAIKTLSKDGPFPLDAFKKVVGVNLIGTFNVLRL 120
Query 121 GAERIAKTEPIGE----ERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLAS 176
AERIAKTEPIG ERGVIINTASVAAF+GQIGQAAYSASKGGVVGMTLPIARDLA
Sbjct 121 AAERIAKTEPIGPGTSPERGVIINTASVAAFEGQIGQAAYSASKGGVVGMTLPIARDLAR 180
Query 177 KLIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNG 236
+LIRVVTIAPGLF TPLL SLP EA+ASLG+QVPHP+RLG+PDEYGAL +HI+ENPMLNG
Sbjct 181 ELIRVVTIAPGLFKTPLLGSLPEEAQASLGKQVPHPARLGDPDEYGALAVHIVENPMLNG 240
Query 237 EVIRLDGAIRMAPR 250
EVIRLDGAIRMAPR
Sbjct 241 EVIRLDGAIRMAPR 254
>gi|118468032|ref|YP_889429.1| 3-hydroxyacyl-CoA dehydrogenase [Mycobacterium smegmatis str.
MC2 155]
gi|118169319|gb|ABK70215.1| 3-Hydroxyacyl-CoA dehydrogenase [Mycobacterium smegmatis str.
MC2 155]
Length=253
Score = 405 bits (1041), Expect = 3e-111, Method: Compositional matrix adjust.
Identities = 203/253 (81%), Positives = 226/253 (90%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDDVVGGLGDRARFAQADVTDE 60
M+ KDAVAVVTGGASGLGLATTKRLLDAGAQVVV+DL+G++VV LGDRA+F DVTDE
Sbjct 1 MEIKDAVAVVTGGASGLGLATTKRLLDAGAQVVVIDLKGEEVVAELGDRAKFVATDVTDE 60
Query 61 AAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVLRL 120
A V+ AL +A+SLGPVR+ VNCAG GNAI+ LS++G FPL FRK+V++NL+GTFNV+RL
Sbjct 61 AGVTEALNVAESLGPVRINVNCAGIGNAIKTLSKNGPFPLDGFRKVVEVNLIGTFNVIRL 120
Query 121 GAERIAKTEPIG---EERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
AERIAKTEPIG EERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDL+ +
Sbjct 121 SAERIAKTEPIGPNGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLSRE 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
LIRVVTIAPGLF TPLL SLP EA+ SLG QVPHP+RLG+PDEYGAL HIIENPMLNGE
Sbjct 181 LIRVVTIAPGLFKTPLLGSLPEEAQKSLGAQVPHPARLGDPDEYGALAQHIIENPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
VIRLDGAIRMAPR
Sbjct 241 VIRLDGAIRMAPR 253
>gi|333989763|ref|YP_004522377.1| short-chain dehydrogenase [Mycobacterium sp. JDM601]
gi|333485731|gb|AEF35123.1| short-chain type dehydrogenase/reductase [Mycobacterium sp. JDM601]
Length=250
Score = 404 bits (1037), Expect = 8e-111, Method: Compositional matrix adjust.
Identities = 201/250 (81%), Positives = 223/250 (90%), Gaps = 0/250 (0%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDDVVGGLGDRARFAQADVTDE 60
M+ KDAVAVVTGGASGLGLATTKRLLDAGAQVVV+DLRG D V LGDRARFA+A+VTD
Sbjct 1 MQIKDAVAVVTGGASGLGLATTKRLLDAGAQVVVIDLRGADAVAELGDRARFAEANVTDA 60
Query 61 AAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVLRL 120
AV+ AL++A+SLGP+R+ VNCAG GNAI+ LS++G FPL F K+V +NL+GTFNVLRL
Sbjct 61 EAVTAALDVAESLGPLRINVNCAGIGNAIKTLSKNGAFPLEEFTKVVQVNLIGTFNVLRL 120
Query 121 GAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASKLIR 180
AERIAKTEP+GEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDL+ +LIR
Sbjct 121 AAERIAKTEPVGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLSRELIR 180
Query 181 VVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGEVIR 240
V TIAPGLF TPLL SLP EA+ SLG QVPHP+RLG+PDEYGAL HII NPMLNGEVIR
Sbjct 181 VCTIAPGLFKTPLLGSLPEEAQRSLGGQVPHPARLGDPDEYGALAEHIISNPMLNGEVIR 240
Query 241 LDGAIRMAPR 250
LDGAIRMAPR
Sbjct 241 LDGAIRMAPR 250
>gi|342861758|ref|ZP_08718404.1| 3-hydroxyacyl-CoA dehydrogenase [Mycobacterium colombiense CECT
3035]
gi|342130892|gb|EGT84188.1| 3-hydroxyacyl-CoA dehydrogenase [Mycobacterium colombiense CECT
3035]
Length=253
Score = 400 bits (1029), Expect = 7e-110, Method: Compositional matrix adjust.
Identities = 200/253 (80%), Positives = 227/253 (90%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDDVVGGLGDRARFAQADVTDE 60
M+ KDAVAVVTGGASGLGLATTKRLLD GAQVVV+DLRG++ V LGDRARF +ADVTDE
Sbjct 1 MEIKDAVAVVTGGASGLGLATTKRLLDRGAQVVVIDLRGEEAVRELGDRARFVEADVTDE 60
Query 61 AAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVLRL 120
AAV AL+ A+S+G +R+ VNCAG GNAI+ LS+DG FPL F+K++ +NL+GTFNVLRL
Sbjct 61 AAVGKALDAAESMGTLRINVNCAGIGNAIKTLSKDGPFPLDGFKKVIGVNLIGTFNVLRL 120
Query 121 GAERIAKTEPIG---EERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
AERIAKTEP+G EERGVIINTASVAAF+GQIGQAAYSASKGGVVGMTLPIARDL+ +
Sbjct 121 AAERIAKTEPVGPKGEERGVIINTASVAAFEGQIGQAAYSASKGGVVGMTLPIARDLSRE 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
LIRVVTIAPGLF TPLL SLP EA+ASLG+QVPHP+RLG+PDEYGAL +HI+ENPMLNGE
Sbjct 181 LIRVVTIAPGLFKTPLLGSLPEEAQASLGKQVPHPARLGDPDEYGALAVHIVENPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
VIRLDGAIRMAPR
Sbjct 241 VIRLDGAIRMAPR 253
>gi|254820697|ref|ZP_05225698.1| 3-hydroxyacyl-CoA dehydrogenase [Mycobacterium intracellulare
ATCC 13950]
Length=254
Score = 398 bits (1023), Expect = 3e-109, Method: Compositional matrix adjust.
Identities = 200/254 (79%), Positives = 226/254 (89%), Gaps = 4/254 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDDVVGGLGDRARFAQADVTDE 60
M+ KDAVAVVTGGASGLGLATTKRLLD GAQVVV+DLRG+D V LG+RARF +ADVTDE
Sbjct 1 MEIKDAVAVVTGGASGLGLATTKRLLDRGAQVVVIDLRGEDAVRELGERARFVEADVTDE 60
Query 61 AAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVLRL 120
AAV AL+ A+S+G +R+ VNCAG GNAI+ LS+DG FPL F+K++ +NL+GTFNVLRL
Sbjct 61 AAVGKALDAAESMGTLRINVNCAGIGNAIKTLSKDGPFPLDGFKKVIGVNLIGTFNVLRL 120
Query 121 GAERIAKTEPIGEE----RGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLAS 176
AERIAKTEPIG E RGVIINTASVAAF+GQIGQAAYSASKGGVVGMTLPIARDL+
Sbjct 121 AAERIAKTEPIGPETSPERGVIINTASVAAFEGQIGQAAYSASKGGVVGMTLPIARDLSR 180
Query 177 KLIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNG 236
+LIRVVTIAPGLF TPLL SLP EA+ASLG+QVPHP+RLG+PDEYGAL +HI+ENPMLNG
Sbjct 181 ELIRVVTIAPGLFKTPLLGSLPEEAQASLGKQVPHPARLGDPDEYGALAVHIVENPMLNG 240
Query 237 EVIRLDGAIRMAPR 250
EVIRLDGAIRMAPR
Sbjct 241 EVIRLDGAIRMAPR 254
>gi|108801032|ref|YP_641229.1| short-chain dehydrogenase/reductase SDR [Mycobacterium sp. MCS]
gi|119870173|ref|YP_940125.1| short-chain dehydrogenase/reductase SDR [Mycobacterium sp. KMS]
gi|126436868|ref|YP_001072559.1| short-chain dehydrogenase/reductase SDR [Mycobacterium sp. JLS]
gi|108771451|gb|ABG10173.1| short-chain dehydrogenase/reductase SDR [Mycobacterium sp. MCS]
gi|119696262|gb|ABL93335.1| short-chain dehydrogenase/reductase SDR [Mycobacterium sp. KMS]
gi|126236668|gb|ABO00069.1| short-chain dehydrogenase/reductase SDR [Mycobacterium sp. JLS]
Length=250
Score = 388 bits (997), Expect = 4e-106, Method: Compositional matrix adjust.
Identities = 190/250 (76%), Positives = 216/250 (87%), Gaps = 0/250 (0%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDDVVGGLGDRARFAQADVTDE 60
M+ KDA AVVTGGASGLGLATTKRLLD GA VVV+DL+G++ V LGDRA+F QA+VTD
Sbjct 1 MEIKDAAAVVTGGASGLGLATTKRLLDRGASVVVIDLKGEEAVKELGDRAKFVQANVTDP 60
Query 61 AAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVLRL 120
VS AL+ A+ +GP+R+ VNCAG GNAI+ LS++G FPL F K++ +NLVGTFNVLRL
Sbjct 61 EQVSAALDAAEEMGPLRINVNCAGIGNAIKTLSKNGAFPLDEFNKVIQVNLVGTFNVLRL 120
Query 121 GAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASKLIR 180
AERIAKTEPI ERGVIINTASVAAF+GQIGQAAYSASKGGVVGMTLPIARDL+ + IR
Sbjct 121 SAERIAKTEPINGERGVIINTASVAAFEGQIGQAAYSASKGGVVGMTLPIARDLSREFIR 180
Query 181 VVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGEVIR 240
V TIAPGLF TPLL SLP EA+ SLGQQVPHP+RLG+PDEYGAL +HI+ENPMLNGE IR
Sbjct 181 VCTIAPGLFKTPLLGSLPEEAQKSLGQQVPHPARLGDPDEYGALAVHIVENPMLNGETIR 240
Query 241 LDGAIRMAPR 250
LDGAIRMAPR
Sbjct 241 LDGAIRMAPR 250
>gi|145222715|ref|YP_001133393.1| short-chain dehydrogenase/reductase SDR [Mycobacterium gilvum
PYR-GCK]
gi|315443180|ref|YP_004076059.1| hypothetical protein Mspyr1_15540 [Mycobacterium sp. Spyr1]
gi|145215201|gb|ABP44605.1| short-chain dehydrogenase/reductase SDR [Mycobacterium gilvum
PYR-GCK]
gi|315261483|gb|ADT98224.1| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase
like protein [Mycobacterium sp. Spyr1]
Length=250
Score = 382 bits (980), Expect = 3e-104, Method: Compositional matrix adjust.
Identities = 187/250 (75%), Positives = 215/250 (86%), Gaps = 0/250 (0%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDDVVGGLGDRARFAQADVTDE 60
M+ KDA AVVTGGASGLGLATTKRLLD GA VVV+DL+G+DVV LG RA+F +A+VTD
Sbjct 1 MEIKDAAAVVTGGASGLGLATTKRLLDRGASVVVIDLKGEDVVAELGPRAKFVEANVTDP 60
Query 61 AAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVLRL 120
V+ AL+ A+ GP+R+ VNCAG GNAI+ LS+DG FPL F K++ +NL+GTFNVLRL
Sbjct 61 EQVAAALDAAEEFGPLRINVNCAGIGNAIKTLSKDGPFPLDGFTKVIQVNLIGTFNVLRL 120
Query 121 GAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASKLIR 180
AER+AK EPI ERGVIINTASVAAF+GQIGQAAYSASKGGVVGMTLPIARDL+ + IR
Sbjct 121 AAERMAKQEPINGERGVIINTASVAAFEGQIGQAAYSASKGGVVGMTLPIARDLSREFIR 180
Query 181 VVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGEVIR 240
V TIAPGLF TPLL SLP EA+ASLG+QVPHP+RLG+PDEYGAL +HI+ENPMLNGE IR
Sbjct 181 VCTIAPGLFKTPLLGSLPEEAQASLGKQVPHPARLGDPDEYGALAVHIVENPMLNGETIR 240
Query 241 LDGAIRMAPR 250
LDGAIRMAPR
Sbjct 241 LDGAIRMAPR 250
>gi|120405529|ref|YP_955358.1| short-chain dehydrogenase/reductase SDR [Mycobacterium vanbaalenii
PYR-1]
gi|119958347|gb|ABM15352.1| short-chain dehydrogenase/reductase SDR [Mycobacterium vanbaalenii
PYR-1]
Length=250
Score = 380 bits (976), Expect = 1e-103, Method: Compositional matrix adjust.
Identities = 187/250 (75%), Positives = 217/250 (87%), Gaps = 0/250 (0%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDDVVGGLGDRARFAQADVTDE 60
M+ KDAVAVVTGGASGLGLATTKRLLD GA VVV+DLRG++ V L RA+F + +VTD
Sbjct 1 MEIKDAVAVVTGGASGLGLATTKRLLDRGASVVVMDLRGEEAVKELDARAKFVETNVTDP 60
Query 61 AAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVLRL 120
V+ AL+ A+ +GP+R+ VNCAG GNA + LS+DG FPL AF+K+V++NL+GTFNV+RL
Sbjct 61 EQVAAALDAAEEMGPLRIDVNCAGIGNAAKTLSKDGPFPLDAFKKVVEVNLIGTFNVIRL 120
Query 121 GAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASKLIR 180
AERIAK EPI ERGVIINTASVAAF+GQIGQAAYSASKGGVVGMTLPIARDL+ +LIR
Sbjct 121 AAERIAKQEPINGERGVIINTASVAAFEGQIGQAAYSASKGGVVGMTLPIARDLSRELIR 180
Query 181 VVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGEVIR 240
V TIAPGLF TPLL SLP EA+ASLG+QVPHP+RLG+PDEYGAL +HI+ENPMLNGE IR
Sbjct 181 VCTIAPGLFKTPLLGSLPEEAQASLGKQVPHPARLGDPDEYGALAVHIVENPMLNGETIR 240
Query 241 LDGAIRMAPR 250
LDGAIRMAPR
Sbjct 241 LDGAIRMAPR 250
>gi|226309110|ref|YP_002769070.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
gi|226188227|dbj|BAH36331.1| putative 3-hydroxyacyl-CoA dehydrogenase [Rhodococcus erythropolis
PR4]
Length=253
Score = 380 bits (975), Expect = 1e-103, Method: Compositional matrix adjust.
Identities = 191/253 (76%), Positives = 215/253 (85%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDL---RGDDVVGGLGDRARFAQADV 57
M D+VAVVTGGASGLGLATTK LL GA VV++DL G+ + LGDR RFA ADV
Sbjct 1 MIVNDSVAVVTGGASGLGLATTKALLADGASVVIIDLPSSNGEAIAKELGDRVRFAAADV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
TDEAAV+ AL++A+SLGP+RV VNCAG GNA++ +S+ G FPL AF+K++D+NL+GTFNV
Sbjct 61 TDEAAVTAALDVAESLGPLRVAVNCAGIGNAVKTVSKKGAFPLDAFKKVIDVNLIGTFNV 120
Query 118 LRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
LRL AERI+KTEPI ERGVIINTASVAA+DGQIGQAAYSASKGGVVGMTLPIARDLAS
Sbjct 121 LRLAAERISKTEPIDSERGVIINTASVAAYDGQIGQAAYSASKGGVVGMTLPIARDLASL 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
LIRV TIAPGLF TPLLA LP A+ASLGQQVPHPSRLG+P EYGAL HI+ NPMLNGE
Sbjct 181 LIRVNTIAPGLFKTPLLAGLPEAAQASLGQQVPHPSRLGDPSEYGALAAHIVSNPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
IRLDGAIRMAPR
Sbjct 241 TIRLDGAIRMAPR 253
>gi|229491638|ref|ZP_04385459.1| 3-hydroxyacyl-coa dehydrogenase type-2 (short-chain typedehydrogenase/reductase
x [Rhodococcus erythropolis SK121]
gi|229321319|gb|EEN87119.1| 3-hydroxyacyl-coa dehydrogenase type-2 (short-chain typedehydrogenase/reductase
x [Rhodococcus erythropolis SK121]
Length=253
Score = 378 bits (971), Expect = 4e-103, Method: Compositional matrix adjust.
Identities = 191/253 (76%), Positives = 215/253 (85%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDL---RGDDVVGGLGDRARFAQADV 57
M D+VAVVTGGASGLGLATTK LL GA VV++DL G+ + LGDR RFA ADV
Sbjct 1 MIVNDSVAVVTGGASGLGLATTKALLADGASVVIIDLPSSNGEAIAKELGDRVRFAAADV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
TDEAAV+ AL++A+SLGP+RV VNCAG GNA++ +S+ G FPL AF+K++D+NL+GTFNV
Sbjct 61 TDEAAVTAALDVAESLGPLRVAVNCAGIGNAVKTVSKKGAFPLDAFKKVIDVNLIGTFNV 120
Query 118 LRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
LRL AERI+KTEPI ERGVIINTASVAA+DGQIGQAAYSASKGGVVGMTLPIARDLAS
Sbjct 121 LRLAAERISKTEPIDGERGVIINTASVAAYDGQIGQAAYSASKGGVVGMTLPIARDLASL 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
LIRV TIAPGLF TPLLA LP A+ASLGQQVPHPSRLG+P EYGAL HI+ NPMLNGE
Sbjct 181 LIRVNTIAPGLFKTPLLAGLPEAAQASLGQQVPHPSRLGDPSEYGALAAHIVSNPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
IRLDGAIRMAPR
Sbjct 241 TIRLDGAIRMAPR 253
>gi|312138197|ref|YP_004005533.1| 3-hydroxy-2-methylbutyryl-CoA dehydrogenase [Rhodococcus equi
103S]
gi|325674898|ref|ZP_08154585.1| 3-hydroxyacyl-CoA dehydrogenase FadB2x [Rhodococcus equi ATCC
33707]
gi|311887536|emb|CBH46848.1| secreted 3-hydroxy-2-methylbutyryl-CoA dehydrogenase [Rhodococcus
equi 103S]
gi|325554484|gb|EGD24159.1| 3-hydroxyacyl-CoA dehydrogenase FadB2x [Rhodococcus equi ATCC
33707]
Length=253
Score = 371 bits (952), Expect = 6e-101, Method: Compositional matrix adjust.
Identities = 191/253 (76%), Positives = 213/253 (85%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDL---RGDDVVGGLGDRARFAQADV 57
M KD+VA+VTGGASGLGLAT K L D GA VV++DL G+ V LGDR RFA DV
Sbjct 1 MIVKDSVALVTGGASGLGLATVKALHDQGASVVILDLPSSNGEVVAKELGDRVRFAAGDV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
TDEA+V AL+LA+SLGP+RV VNCAG GNAI+ + + G FPLA F+++V+INLVGTFNV
Sbjct 61 TDEASVVAALDLAESLGPLRVTVNCAGIGNAIKTVGKQGAFPLAEFQRVVNINLVGTFNV 120
Query 118 LRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
LRL AERIAKT+PI ERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLAS
Sbjct 121 LRLAAERIAKTDPIEGERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASM 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
LIRVVTIAPGLF TPLLA LP A+ SLG+QVPHPSRLG+P EYG+L HI+ NPMLNGE
Sbjct 181 LIRVVTIAPGLFKTPLLAGLPEPAQESLGKQVPHPSRLGDPAEYGSLAAHIVSNPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
VIRLDGAIRMAPR
Sbjct 241 VIRLDGAIRMAPR 253
>gi|111025231|ref|YP_707651.1| short chain dehydrogenase [Rhodococcus jostii RHA1]
gi|110824210|gb|ABG99493.1| short chain dehydrogenase [Rhodococcus jostii RHA1]
Length=253
Score = 363 bits (932), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 183/253 (73%), Positives = 208/253 (83%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDL---RGDDVVGGLGDRARFAQADV 57
M D+ V+TGGASGLGLA K LL+ GA VV+VDL RGD + LGDR RF ADV
Sbjct 1 MLIPDSACVITGGASGLGLAAAKSLLNEGAAVVIVDLPTSRGDSIAERLGDRVRFVAADV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
TDE A+S+AL++A++LGPVRV +NCAG NAI+ + + G FPLA F K+V +NL+GTFNV
Sbjct 61 TDEQAISSALDVAETLGPVRVAINCAGITNAIKTVGKSGPFPLADFAKVVSVNLIGTFNV 120
Query 118 LRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
LRL AERIA+T+PI ERGVIINTASVAAFDGQIGQAAYSASKGGV GMTLPIARDLAS
Sbjct 121 LRLAAERIAQTKPIDGERGVIINTASVAAFDGQIGQAAYSASKGGVAGMTLPIARDLASL 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
+IRVVTIAPGLF TPLLASLP EA+ SLG QVPHPSRLG+P EYGAL HI+ NPMLNGE
Sbjct 181 MIRVVTIAPGLFKTPLLASLPLEAQRSLGAQVPHPSRLGDPSEYGALAAHIVSNPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
IRLDGAIRM+PR
Sbjct 241 TIRLDGAIRMSPR 253
>gi|111020935|ref|YP_703907.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
gi|110820465|gb|ABG95749.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
Length=253
Score = 362 bits (929), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 186/253 (74%), Positives = 208/253 (83%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDL---RGDDVVGGLGDRARFAQADV 57
M D+VA+VTGGASGLGLATTK LL GA VV++DL G+ V LGDR RFA DV
Sbjct 1 MIVNDSVALVTGGASGLGLATTKALLADGASVVIIDLPSSNGETVAKELGDRVRFAAGDV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
T EA VS AL++A+SLGP+RV VNCAG GNAI+ +S++G FPLA F KIV +NL+GTFNV
Sbjct 61 TSEADVSAALDVAESLGPLRVAVNCAGIGNAIKTVSKNGAFPLADFTKIVTVNLIGTFNV 120
Query 118 LRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
+RL AERI+K EPI ERGVIINTASVAA++GQIGQAAYSASKGGVVGMTLPIARDLAS
Sbjct 121 IRLAAERISKNEPIDGERGVIINTASVAAYEGQIGQAAYSASKGGVVGMTLPIARDLASL 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
LIRV TIAPGLF TPLL SLP A+ SLG QVPHPSRLG+P EYGAL HI+ NPMLNGE
Sbjct 181 LIRVNTIAPGLFKTPLLGSLPEAAQQSLGGQVPHPSRLGDPSEYGALAAHIVSNPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
IRLDGAIRMAPR
Sbjct 241 TIRLDGAIRMAPR 253
>gi|288924059|ref|ZP_06418119.1| short-chain dehydrogenase/reductase SDR [Frankia sp. EUN1f]
gi|288344596|gb|EFC79065.1| short-chain dehydrogenase/reductase SDR [Frankia sp. EUN1f]
Length=253
Score = 360 bits (925), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 184/253 (73%), Positives = 211/253 (84%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDD---VVGGLGDRARFAQADV 57
M D+VA+VTGGASGLGLATT++LL+AGA VV++DL D V LG+R RFA DV
Sbjct 1 MNITDSVALVTGGASGLGLATTEKLLEAGASVVIIDLPSSDGAAVADKLGERVRFAPGDV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
EA V+ AL+LA LG +RV VNCAGTGN I+ + +DG FPL F++I+DINLVGTFNV
Sbjct 61 RSEADVTAALDLAAELGTLRVAVNCAGTGNGIKTVGKDGPFPLDQFQRIIDINLVGTFNV 120
Query 118 LRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
+RL A RIA EP+GEERGVI+NTASVAAF+GQIGQAAYSASK GV GMTLPIARDLAS
Sbjct 121 VRLAAARIAGAEPLGEERGVIVNTASVAAFEGQIGQAAYSASKSGVAGMTLPIARDLASL 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
IRVVTIAPGL+DTPLLA+LP EA+ASLG+QVPHPSRLGNP E+GALV HI+ NPMLNGE
Sbjct 181 KIRVVTIAPGLYDTPLLATLPEEARASLGRQVPHPSRLGNPVEFGALVAHIVSNPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
VIRLDGAIRMAPR
Sbjct 241 VIRLDGAIRMAPR 253
>gi|54312032|dbj|BAD66658.1| 3-Hydroxyacyl-CoA dehydrogenase [Mycobacterium sp. P101]
Length=250
Score = 359 bits (921), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 185/251 (74%), Positives = 212/251 (85%), Gaps = 2/251 (0%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDDVVGGLGDRARFAQADVTDE 60
M+ KD+VAVVTGGASGLGLATTKRLLDAGA VVV+DL+G++ V LG+RA+F A+VTDE
Sbjct 1 MEIKDSVAVVTGGASGLGLATTKRLLDAGASVVVIDLKGEEAVAELGERAKFVAANVTDE 60
Query 61 AAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVLRL 120
AVS AL++A+SLGPVR+ VNCAG GNAI+ L ++G FPL FRK+V++NL+GTFNVLRL
Sbjct 61 DAVSKALDVAESLGPVRINVNCAGIGNAIKTLGKEGPFPLDGFRKVVEVNLIGTFNVLRL 120
Query 121 GAERIAKTEPI-GEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASKLI 179
AERIAKTEP+ EERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIA DL+ LI
Sbjct 121 AAERIAKTEPLKNEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIAGDLSRSLI 180
Query 180 RVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGEVI 239
RV TIA A A +SLGQQVPHP+RLG+PDEYGAL +HI+ENPMLNGEVI
Sbjct 181 RVCTIARVCSRRRCWAHCRRGA-SSLGQQVPHPARLGDPDEYGALAVHIVENPMLNGEVI 239
Query 240 RLDGAIRMAPR 250
RLDGAIRMAPR
Sbjct 240 RLDGAIRMAPR 250
>gi|300785743|ref|YP_003766034.1| 3-hydroxyacyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
gi|299795257|gb|ADJ45632.1| 3-hydroxyacyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
gi|340527206|gb|AEK42411.1| 3-hydroxyacyl-CoA dehydrogenase [Amycolatopsis mediterranei S699]
Length=253
Score = 357 bits (916), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 180/253 (72%), Positives = 213/253 (85%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDD---VVGGLGDRARFAQADV 57
M +D VA+VTGGASGLGLATT+ L AGA+VV+VDL G D V GLG+ RFA ADV
Sbjct 1 MDIRDGVALVTGGASGLGLATTQALFGAGARVVIVDLPGSDGAQVAAGLGENVRFAPADV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
D V+ AL++ADSLG +RV VNCAGTGNA+R+L R+GVFPL F +IV+INL+GTFNV
Sbjct 61 RDPEQVAAALDVADSLGALRVTVNCAGTGNAVRMLGRNGVFPLPEFTRIVEINLIGTFNV 120
Query 118 LRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
+RL AER+AK E +GEERGV++NTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLA +
Sbjct 121 IRLAAERMAKQELLGEERGVVVNTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLAGQ 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
IRVVT+APGLFDTP +A+ P E +A+LG+QVPHPSRLG+P E+ ALV H++ NPMLNGE
Sbjct 181 QIRVVTVAPGLFDTPPMAAAPEELRAALGKQVPHPSRLGDPAEFAALVAHVVANPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
VIRLDGAIRM+PR
Sbjct 241 VIRLDGAIRMSPR 253
>gi|311743448|ref|ZP_07717254.1| 3-hydroxyacyl-CoA dehydrogenase FadB2x [Aeromicrobium marinum
DSM 15272]
gi|311312578|gb|EFQ82489.1| 3-hydroxyacyl-CoA dehydrogenase FadB2x [Aeromicrobium marinum
DSM 15272]
Length=254
Score = 352 bits (904), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 183/254 (73%), Positives = 210/254 (83%), Gaps = 4/254 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRG---DDVVGGLGDRARFAQADV 57
M VA+VTGGASGLGLATT LL AGA+VV++DL G DDV LG+ ARFA ADV
Sbjct 1 MDINHQVALVTGGASGLGLATTHALLAAGAKVVMLDLPGSPGDDVAAELGENARFAAADV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGV-FPLAAFRKIVDINLVGTFN 116
DEAAVS AL++A LG +R VVNCAGTG+AI+ + RD +PL F++I++INL+GTFN
Sbjct 61 RDEAAVSAALDVAAELGDLRAVVNCAGTGDAIKTVGRDNAPYPLDKFQRIIEINLIGTFN 120
Query 117 VLRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLAS 176
V+RL A R++ EP+GEERGVI+NTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLA
Sbjct 121 VIRLAAARMSALEPLGEERGVIVNTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLAK 180
Query 177 KLIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNG 236
IRV+TIAPGLFDTPLLASLP +AKASLG QVPHPSRLG+P E+GAL HI+ NPMLNG
Sbjct 181 TGIRVMTIAPGLFDTPLLASLPEDAKASLGAQVPHPSRLGDPAEFGALAAHIVANPMLNG 240
Query 237 EVIRLDGAIRMAPR 250
E IRLDGAIRMAPR
Sbjct 241 ETIRLDGAIRMAPR 254
>gi|333921887|ref|YP_004495468.1| putative short chain dehydrogenase [Amycolicicoccus subflavus
DQS3-9A1]
gi|333484108|gb|AEF42668.1| Putative short chain dehydrogenase [Amycolicicoccus subflavus
DQS3-9A1]
Length=253
Score = 352 bits (902), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 180/253 (72%), Positives = 206/253 (82%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDD---VVGGLGDRARFAQADV 57
M+ VA+VTGGASGLGLAT + L GA+VV+VDL D + LGD A FA ADV
Sbjct 1 MEPSSTVALVTGGASGLGLATVRELHSKGAKVVIVDLPSSDGATIAKELGDGAIFAAADV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
T E+ V+ A+ AD+LG +RVVVNCAG GNAI+ + + G FPLA F K++++NLVGTFNV
Sbjct 61 TSESEVAAAISEADTLGDLRVVVNCAGIGNAIKTVGKSGAFPLADFTKVLNVNLVGTFNV 120
Query 118 LRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
+RL AER+AK+EPIGEERGVIINTASVAAFDGQ+GQAAYSASKGG+VGMTLPIARDLAS
Sbjct 121 IRLTAERMAKSEPIGEERGVIINTASVAAFDGQVGQAAYSASKGGIVGMTLPIARDLASL 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
IRVVTIAPGLF TPL A+LP EA SLG QVPHPSRLG+P EYGAL HI+ENPMLNGE
Sbjct 181 KIRVVTIAPGLFHTPLFAALPEEAINSLGAQVPHPSRLGDPVEYGALARHIVENPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
IRLDGAIRMAPR
Sbjct 241 TIRLDGAIRMAPR 253
>gi|226363231|ref|YP_002781013.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodococcus opacus B4]
gi|226241720|dbj|BAH52068.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodococcus opacus B4]
Length=253
Score = 351 bits (900), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 186/253 (74%), Positives = 208/253 (83%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDL---RGDDVVGGLGDRARFAQADV 57
M D+VA+VTGGASGLGLATTK LL GA VV+VDL G+ V LGDR RFA DV
Sbjct 1 MIVNDSVALVTGGASGLGLATTKALLADGASVVIVDLPSSNGETVAKELGDRVRFAAGDV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
T EA V+ AL++A+SLGP+RV VNCAG GNAI+ +S++G FPLA F KIV +NL+GTFNV
Sbjct 61 TSEADVAAALDVAESLGPLRVAVNCAGIGNAIKTVSKNGAFPLADFTKIVTVNLIGTFNV 120
Query 118 LRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
+RL AERI+K EPI ERGVIINTASVAA++GQIGQAAYSASKGGVVGMTLPIARDLAS
Sbjct 121 IRLAAERISKNEPIDGERGVIINTASVAAYEGQIGQAAYSASKGGVVGMTLPIARDLASL 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
LIRV TIAPGLF TPLL SLP A+ SLG QVPHPSRLG+P EYGAL HI+ NPMLNGE
Sbjct 181 LIRVNTIAPGLFKTPLLGSLPEAAQQSLGGQVPHPSRLGDPSEYGALAAHIVSNPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
IRLDGAIRMAPR
Sbjct 241 TIRLDGAIRMAPR 253
>gi|134099983|ref|YP_001105644.1| short-chain dehydrogenase/reductase SDR [Saccharopolyspora erythraea
NRRL 2338]
gi|291003025|ref|ZP_06560998.1| short-chain dehydrogenase/reductase SDR [Saccharopolyspora erythraea
NRRL 2338]
gi|133912606|emb|CAM02719.1| short-chain dehydrogenase/reductase SDR [Saccharopolyspora erythraea
NRRL 2338]
Length=254
Score = 351 bits (900), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 182/254 (72%), Positives = 209/254 (83%), Gaps = 4/254 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDL---RGDDVVGGLGDRARFAQADV 57
M +VA+VTGGASGLGLAT +RL+ AGA+VV++DL G+ V LG ARF ADV
Sbjct 1 MDISGSVALVTGGASGLGLATARRLVAAGARVVLLDLPDSAGERVAADLGAGARFVAADV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSR-DGVFPLAAFRKIVDINLVGTFN 116
TDE V AL+ AD+ G +R+VVNCAGTGNA+RV+SR G FPL AF +I+D+NLVGTFN
Sbjct 61 TDEKQVGAALDAADTAGTLRIVVNCAGTGNAMRVVSRGKGPFPLEAFSRIIDVNLVGTFN 120
Query 117 VLRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLAS 176
VLRLGAER+ + EP+G+ERGV+INTASVAAFDGQIGQAAYSASK GVVGMTLP+ARDLA
Sbjct 121 VLRLGAERMLRHEPVGQERGVVINTASVAAFDGQIGQAAYSASKAGVVGMTLPVARDLAE 180
Query 177 KLIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNG 236
IRVVTIAPGLFDTPLLA E KASLG QVPHP+RLG+PDE+GAL HI+ NPMLNG
Sbjct 181 HAIRVVTIAPGLFDTPLLAGASEEVKASLGAQVPHPARLGDPDEFGALAEHIVSNPMLNG 240
Query 237 EVIRLDGAIRMAPR 250
EVIRLDGAIRMAPR
Sbjct 241 EVIRLDGAIRMAPR 254
>gi|288917011|ref|ZP_06411382.1| short-chain dehydrogenase/reductase SDR [Frankia sp. EUN1f]
gi|288351551|gb|EFC85757.1| short-chain dehydrogenase/reductase SDR [Frankia sp. EUN1f]
Length=253
Score = 350 bits (898), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 179/253 (71%), Positives = 207/253 (82%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDD---VVGGLGDRARFAQADV 57
M D+V +VTGGASGLGLATT++L++AGA VV+ D G D V G LGDR RFA DV
Sbjct 1 MNVTDSVVLVTGGASGLGLATTEKLVEAGASVVIFDPPGSDGAAVAGKLGDRVRFAAGDV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
EA V+ AL++A LG +R VNCAGTGN I+ + +DG FPL F++IVDINLVGTFNV
Sbjct 61 RSEADVTAALDVAAELGTLRAAVNCAGTGNGIKTVGKDGPFPLDQFQRIVDINLVGTFNV 120
Query 118 LRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
+RL A RIA EPI ERGVI+NTASVAAFDGQIGQAAYSASKGGVVG+TLP+ARDL S
Sbjct 121 IRLAAARIAMAEPIDGERGVIVNTASVAAFDGQIGQAAYSASKGGVVGLTLPVARDLGSL 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
IRVVTIAPGLFDTPLLA+LP EAKASLG+QVPHPSRLGNP E+G++V +++ NPMLNGE
Sbjct 181 QIRVVTIAPGLFDTPLLAALPEEAKASLGRQVPHPSRLGNPVEFGSMVAYVLTNPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
IRLDGAIRMAPR
Sbjct 241 TIRLDGAIRMAPR 253
>gi|111222531|ref|YP_713325.1| 3-hydroxyacyl-CoA dehydrogenase [Frankia alni ACN14a]
gi|111150063|emb|CAJ61758.1| 3-hydroxyacyl-CoA dehydrogenase [Frankia alni ACN14a]
Length=253
Score = 348 bits (893), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 180/253 (72%), Positives = 205/253 (82%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDL---RGDDVVGGLGDRARFAQADV 57
M ++A+VTGGASGLGLAT +RLL AGA+VV++DL GD V LGD ARF ADV
Sbjct 1 MDISGSIALVTGGASGLGLATARRLLAAGARVVLLDLPSSAGDAVAKELGDDARFVAADV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
T V AL+ A + GP+RVVVNCAGTGNAIRVL R GVFPL AF K++ +NL+GTFNV
Sbjct 61 TQPEEVGAALDAAVAFGPLRVVVNCAGTGNAIRVLGRGGVFPLEAFAKVIHVNLIGTFNV 120
Query 118 LRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
+RL AERIA EP+ +RGVI+NTASVAAF+GQIGQAAYSASKGGV MTLPIARDLA K
Sbjct 121 IRLAAERIATVEPVDGDRGVIVNTASVAAFEGQIGQAAYSASKGGVAAMTLPIARDLADK 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
IRVVTIAPGLF+TP+L L +A+ SLG+QVPHPSRLGNPDEY ALV HI+ NPMLNGE
Sbjct 181 AIRVVTIAPGLFETPMLGGLSEQARESLGRQVPHPSRLGNPDEYAALVEHIVANPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
VIRLDGAIRMAPR
Sbjct 241 VIRLDGAIRMAPR 253
>gi|86740262|ref|YP_480662.1| short-chain dehydrogenase/reductase SDR [Frankia sp. CcI3]
gi|86567124|gb|ABD10933.1| short-chain dehydrogenase/reductase SDR [Frankia sp. CcI3]
Length=253
Score = 347 bits (890), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 177/253 (70%), Positives = 203/253 (81%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDL---RGDDVVGGLGDRARFAQADV 57
M+ D+VAVVTGGASGLGLAT RL+DAGA VV++DL G V G RF+ DV
Sbjct 1 MQITDSVAVVTGGASGLGLATATRLIDAGASVVLLDLPSSNGAAVAEKFGSSVRFSPGDV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
T E V+ AL++A LGP+R+ VNCAG NA + LS++G FPLA F ++V +NL+G+FNV
Sbjct 61 TSEQDVTAALDVAAELGPLRIAVNCAGISNAAKTLSKEGPFPLAIFERVVKVNLIGSFNV 120
Query 118 LRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
+RL AERI++TE I ERGVIINTASVAAF+GQIGQAAYSASKGG+VGMTLPIARDLAS
Sbjct 121 IRLAAERISRTEEIDGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARDLASL 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
IRVVTIAPGLFDTPLLASLP A+ SLGQQVPHPSRLG+PDEYG L II NPMLNGE
Sbjct 181 KIRVVTIAPGLFDTPLLASLPEPARVSLGQQVPHPSRLGSPDEYGLLATQIIANPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
IRLDGAIRMAPR
Sbjct 241 TIRLDGAIRMAPR 253
>gi|312199515|ref|YP_004019576.1| short-chain dehydrogenase/reductase SDR [Frankia sp. EuI1c]
gi|311230851|gb|ADP83706.1| short-chain dehydrogenase/reductase SDR [Frankia sp. EuI1c]
Length=254
Score = 346 bits (887), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 187/254 (74%), Positives = 211/254 (84%), Gaps = 4/254 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDL---RGDDVVGGLGDRARFAQADV 57
M+ A AVVTGGASGLGLAT KRL AGA VV++DL G+ +G+RARFA ADV
Sbjct 1 MEIAGATAVVTGGASGLGLATAKRLHKAGASVVLLDLPTSAGEKAAAEIGERARFAPADV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
TD AAV+ AL+LA+ LG +RVVVNCAG G RVL R GV PL AF K++++NLVG+FNV
Sbjct 61 TDPAAVAAALDLAEELGALRVVVNCAGIGPPTRVLGRGGVHPLEAFTKVINVNLVGSFNV 120
Query 118 LRLGAERIAKTEPI-GEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLAS 176
LRLGAERI ++EP+ G ERGVI+NTASVAAFDGQIGQAAY+ASKGG+VGMTLPIARDLA
Sbjct 121 LRLGAERIVRSEPLPGNERGVIVNTASVAAFDGQIGQAAYAASKGGIVGMTLPIARDLAD 180
Query 177 KLIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNG 236
KLIRVVTIAPGLF TPLLASLP A+ SLGQQ PHPSRLG+PDEY ALV HI+ NPMLNG
Sbjct 181 KLIRVVTIAPGLFKTPLLASLPEAAQESLGQQTPHPSRLGDPDEYAALVEHIVANPMLNG 240
Query 237 EVIRLDGAIRMAPR 250
EVIRLDGAIRMAPR
Sbjct 241 EVIRLDGAIRMAPR 254
>gi|54024393|ref|YP_118635.1| putative short chain dehydrogenase [Nocardia farcinica IFM 10152]
gi|54015901|dbj|BAD57271.1| putative short chain dehydrogenase [Nocardia farcinica IFM 10152]
Length=253
Score = 345 bits (886), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 178/253 (71%), Positives = 203/253 (81%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDL---RGDDVVGGLGDRARFAQADV 57
M+ ++VAVVTGGASGLGLAT K L G +VV++DL G+ V LGD FA ADV
Sbjct 1 MQIGNSVAVVTGGASGLGLATVKELHRNGGKVVIIDLPSSDGESVAKELGDGVVFAAADV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
T+E VS AL+ A LG +R+ VNCAG GNAI+ + + G FPLA F K+V++NL+GTFNV
Sbjct 61 TNEEQVSAALDAAQELGTLRIAVNCAGIGNAIKTVGKKGAFPLADFTKVVNVNLIGTFNV 120
Query 118 LRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
+RL AERIA T+P GEERGVIINTASVAAFDGQIGQAAYSASKGG+VGMTLPIARDLA+
Sbjct 121 IRLAAERIAATDPEGEERGVIINTASVAAFDGQIGQAAYSASKGGIVGMTLPIARDLAAL 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
IRVVTIAPGLF TPL A+LP EA ASLG QVPHPSRLG+P EY AL HI+ENPMLNGE
Sbjct 181 AIRVVTIAPGLFHTPLFATLPDEAIASLGAQVPHPSRLGDPGEYAALARHIVENPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
IRLDGAIRMAPR
Sbjct 241 TIRLDGAIRMAPR 253
>gi|297162055|gb|ADI11767.1| putative short chain dehydrogenase [Streptomyces bingchenggensis
BCW-1]
Length=255
Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 177/249 (72%), Positives = 198/249 (80%), Gaps = 5/249 (2%)
Query 7 VAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDD---VVGGLGDRARFAQADVTDEAAV 63
VA++TGGASGLGLAT +RLLDAGA VV+ DL D V LGDRA FA DVT EA V
Sbjct 7 VALITGGASGLGLATARRLLDAGASVVLADLPSSDGKAVAAELGDRAVFAPTDVTSEADV 66
Query 64 SNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVLRLGAE 123
AL+ A SLG R+ VNCAG G A R LS+ G FPL+ F + + +NL+GTFNV+RL AE
Sbjct 67 RAALDAAASLGEPRIAVNCAGIGTAARTLSKSGPFPLSDFARTIQVNLIGTFNVIRLAAE 126
Query 124 RIAKTEPIG--EERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASKLIRV 181
R+A E G EERGVIINTASVAA++GQIGQAAYSASKGGVVG+TLP+ARDLAS IRV
Sbjct 127 RMAAQELTGGGEERGVIINTASVAAYEGQIGQAAYSASKGGVVGLTLPVARDLASHRIRV 186
Query 182 VTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGEVIRL 241
+TIAPGLF+TP+LA LP EAKASLG QVPHPSRLG P EY ALV HI ENPMLNGEVIRL
Sbjct 187 MTIAPGLFETPMLAGLPEEAKASLGAQVPHPSRLGRPAEYAALVQHITENPMLNGEVIRL 246
Query 242 DGAIRMAPR 250
DGAIRMAPR
Sbjct 247 DGAIRMAPR 255
>gi|324997654|ref|ZP_08118766.1| putative short chain dehydrogenase [Pseudonocardia sp. P1]
Length=253
Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/253 (67%), Positives = 199/253 (79%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDL---RGDDVVGGLGDRARFAQADV 57
M +VAVVTGGASGLGLATT++L++ G +VV++DL +G+ V LGD RF ADV
Sbjct 1 MDINGSVAVVTGGASGLGLATTEKLVEQGGKVVIIDLPSSQGEAVADKLGDAVRFVPADV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
TDEA V AL+ A+ LG VR+ VNCAG GNA + + G FPL F K++++NL+GTFNV
Sbjct 61 TDEAQVGAALDAAEELGTVRIAVNCAGIGNAAKTYGKKGAFPLDGFTKVINVNLIGTFNV 120
Query 118 LRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
+RL AERIA EP+ +RGV+INTASVAAF+GQIGQAAYSASKGG+VGMTLPIARDLA
Sbjct 121 IRLAAERIATAEPVDGDRGVVINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARDLADL 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
IRV TIAPGLF+TPLL +LP + KASLG+QVPHPSRLG P EY L HI+ENPMLNGE
Sbjct 181 GIRVCTIAPGLFETPLLGALPEDVKASLGKQVPHPSRLGQPAEYAKLAAHIVENPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
IRLDGAIRM PR
Sbjct 241 TIRLDGAIRMQPR 253
>gi|111224169|ref|YP_714963.1| putative oxidoreductase [Frankia alni ACN14a]
gi|111151701|emb|CAJ63420.1| Putative oxidoreductase [Frankia alni ACN14a]
Length=253
Score = 334 bits (856), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 173/253 (69%), Positives = 199/253 (79%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDL---RGDDVVGGLGDRARFAQADV 57
M+ D+VAVVTGGASGLGLAT RL+DAGA VV++DL G V LG RF+ DV
Sbjct 1 MQIADSVAVVTGGASGLGLATATRLVDAGASVVLLDLPSSNGAAVAEKLGSAVRFSPGDV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
T V+ AL+ A LGP+R+ VNCAG GNA + L + G FPL F ++V +NL+G+FNV
Sbjct 61 TSPEDVTAALDAAAELGPLRIAVNCAGIGNAAKTLGKQGPFPLDLFERVVRVNLIGSFNV 120
Query 118 LRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
+RL AERI++ E I ERGVIINTASVAAF+GQIGQAAYSASKGG+VGMTLPIARDLA+
Sbjct 121 IRLAAERISQVEEIEGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARDLANL 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
IRVVTIAPGLFDTPLLASLP A+ SLGQQVPHPSRLG+PDEYG L II NPMLNGE
Sbjct 181 KIRVVTIAPGLFDTPLLASLPEPARISLGQQVPHPSRLGSPDEYGLLATQIIANPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
IRLDGAIRMAP+
Sbjct 241 TIRLDGAIRMAPK 253
>gi|296141781|ref|YP_003649024.1| short-chain dehydrogenase/reductase SDR [Tsukamurella paurometabola
DSM 20162]
gi|296029915|gb|ADG80685.1| short-chain dehydrogenase/reductase SDR [Tsukamurella paurometabola
DSM 20162]
Length=252
Score = 329 bits (844), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 172/252 (69%), Positives = 196/252 (78%), Gaps = 2/252 (0%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDL--RGDDVVGGLGDRARFAQADVT 58
M+ + A+VTGGASGLGLAT L AGA VV VDL + + LG RFA ADVT
Sbjct 1 MEIAGSTALVTGGASGLGLATVTALAGAGASVVAVDLPSANTEALDALGAAVRFAPADVT 60
Query 59 DEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVL 118
DE A++ A+E A++ G +R+ VNCAG GNAI+ + ++G FPLA F ++V +NL+GTFNV
Sbjct 61 DEDAITAAVEQANAEGTLRIAVNCAGIGNAIKTVGKNGPFPLADFERVVKVNLIGTFNVT 120
Query 119 RLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASKL 178
RL A I+K EP+GEERGVIINTASVAAFDGQIGQAAYSASKGGVVG TLPIARDLAS L
Sbjct 121 RLAAYAISKNEPVGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGSTLPIARDLASLL 180
Query 179 IRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGEV 238
IRV TIAPGLF TPLL SLP EA+ SLG QVPHPSRLG+P EY LV II NPMLNGE
Sbjct 181 IRVNTIAPGLFKTPLLGSLPEEAQRSLGAQVPHPSRLGDPSEYAQLVAAIITNPMLNGET 240
Query 239 IRLDGAIRMAPR 250
IRLDGAIRMAPR
Sbjct 241 IRLDGAIRMAPR 252
>gi|331697779|ref|YP_004334018.1| 3-hydroxy-2-methylbutyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans
CB1190]
gi|326952468|gb|AEA26165.1| 3-hydroxy-2-methylbutyryl-CoA dehydrogenase [Pseudonocardia dioxanivorans
CB1190]
Length=253
Score = 328 bits (842), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 181/253 (72%), Positives = 208/253 (83%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDL---RGDDVVGGLGDRARFAQADV 57
M VA+VTGGASGLGLAT + LL AGA+VV++DL G++V G LGD ARFA ADV
Sbjct 1 MDINGNVALVTGGASGLGLATAETLLAAGAKVVLLDLPGSAGEEVAGKLGDDARFAPADV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
DEAAV+ AL++A LG +RV VNCAG G A + + + G FPL F ++V+INL+GTFNV
Sbjct 61 RDEAAVAAALDVAAELGTLRVAVNCAGIGPAAKTVGKSGPFPLDLFSRVVEINLIGTFNV 120
Query 118 LRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
+RL AER+ + +P+ ERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLAS
Sbjct 121 IRLAAERMTQADPVDGERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASA 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
+IRVVTIAPGLFDTPLLASLP EA+ SLG QVPHPSRLG+P EYGAL HI+ NPMLNGE
Sbjct 181 MIRVVTIAPGLFDTPLLASLPEEARTSLGAQVPHPSRLGDPAEYGALAAHIVANPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
VIRLDGAIRMAPR
Sbjct 241 VIRLDGAIRMAPR 253
>gi|297154086|gb|ADI03798.1| putative short chain dehydrogenase [Streptomyces bingchenggensis
BCW-1]
Length=252
Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 164/252 (66%), Positives = 197/252 (79%), Gaps = 2/252 (0%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVV--DLRGDDVVGGLGDRARFAQADVT 58
M+ +VA+VTGGASGLGLAT + L D GA VV++ RG D+ LG+R F+ DVT
Sbjct 1 MRIGGSVALVTGGASGLGLATVRNLHDRGASVVILARSARGKDIAAELGERVVFSPGDVT 60
Query 59 DEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVL 118
E VS A+ELA SLG +R+ VNCAGTGNA++ + +DG FPL AF +IV +NL+GTFNV+
Sbjct 61 REEDVSAAIELAASLGTLRIAVNCAGTGNAVKTVGKDGPFPLDAFNEIVQVNLIGTFNVI 120
Query 119 RLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASKL 178
RL A RIA+ E GEERGVI+N ASVAAFDGQIGQAAY+ASK GV+GMTLPIARDLAS
Sbjct 121 RLAAARIAQAEDDGEERGVIVNAASVAAFDGQIGQAAYAASKAGVIGMTLPIARDLASLK 180
Query 179 IRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGEV 238
IRVVTIAPGLF TP+ A P A +LG+QVPHP+RLG+P E+ +L HI+ENPMLNGE
Sbjct 181 IRVVTIAPGLFHTPMFAPFPRSAIDALGRQVPHPARLGDPAEFASLAAHIVENPMLNGET 240
Query 239 IRLDGAIRMAPR 250
IRLDGA+RMAPR
Sbjct 241 IRLDGALRMAPR 252
>gi|336179316|ref|YP_004584691.1| 3-hydroxy-2-methylbutyryl-CoA dehydrogenase [Frankia symbiont
of Datisca glomerata]
gi|334860296|gb|AEH10770.1| 3-hydroxy-2-methylbutyryl-CoA dehydrogenase [Frankia symbiont
of Datisca glomerata]
Length=253
Score = 321 bits (822), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 173/253 (69%), Positives = 199/253 (79%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDD---VVGGLGDRARFAQADV 57
M + +VA +TGGASGLGLAT RLLDAGA V + DL D V LGDRA F ADV
Sbjct 1 MNIEGSVAFITGGASGLGLATAHRLLDAGAFVALADLPSSDGAAVAAKLGDRAVFTPADV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
T E V+ AL+ A LGP+RV VNCAG G RVL +DG PL F ++V INL+GTFNV
Sbjct 61 TSEQDVTAALDTAGRLGPIRVAVNCAGVGTPGRVLGKDGPLPLELFARVVQINLIGTFNV 120
Query 118 LRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
+RL A RIA +P+ ERGVI+NTASVAA+DGQIGQAAYSASKGGVVG+TLP+ARDLA +
Sbjct 121 IRLAAARIAAHDPVDGERGVIVNTASVAAYDGQIGQAAYSASKGGVVGLTLPVARDLAGR 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
IRVVTIAPGLF+TP+LA+LP EA+ SLG QVPHPSRLG P+EY ALV HI++NPMLNGE
Sbjct 181 QIRVVTIAPGLFETPMLATLPEEARNSLGAQVPHPSRLGRPEEYAALVQHIVDNPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
VIRLDGAIRMAPR
Sbjct 241 VIRLDGAIRMAPR 253
>gi|77404553|ref|YP_345129.1| putative 3-hydroxyacyl-CoA dehydrogenase [Rhodococcus erythropolis
PR4]
gi|77019934|dbj|BAE46309.1| putative 3-hydroxyacyl-CoA dehydrogenase [Rhodococcus erythropolis
PR4]
Length=252
Score = 321 bits (822), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 163/245 (67%), Positives = 192/245 (79%), Gaps = 2/245 (0%)
Query 8 AVVTGGASGLGLATTKRLLDAGAQVVVVDL--RGDDVVGGLGDRARFAQADVTDEAAVSN 65
A+VTGGASGLGLAT L +GA+V+ VDL D + LGD FA ADVTDEAAV+
Sbjct 8 ALVTGGASGLGLATVTALAKSGARVIAVDLPTANTDALAALGDTVEFAPADVTDEAAVTE 67
Query 66 ALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVLRLGAERI 125
A+E A++ +R+ VNCAG GNA++ + ++G FPLA F KIV +NL GTFNV+RL A +
Sbjct 68 AVERANAESSLRITVNCAGIGNAVKTVGKNGPFPLAEFEKIVKVNLTGTFNVIRLAAHAM 127
Query 126 AKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASKLIRVVTIA 185
++ EP+ ERGVI+NTASVAAFDGQIGQAAYSASKGG+VG TLPIARDLAS LIRV TIA
Sbjct 128 SQNEPVDGERGVIVNTASVAAFDGQIGQAAYSASKGGIVGATLPIARDLASLLIRVNTIA 187
Query 186 PGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGEVIRLDGAI 245
PGLF TPLL +LP A+ SLGQQVPHP+RLG+P EY LV I+ NPMLNGE IRLDGAI
Sbjct 188 PGLFKTPLLGTLPEAAQISLGQQVPHPNRLGDPAEYAQLVEAIVTNPMLNGETIRLDGAI 247
Query 246 RMAPR 250
RMAPR
Sbjct 248 RMAPR 252
>gi|297189984|ref|ZP_06907382.1| 3-hydroxyacyl-CoA dehydrogenase [Streptomyces pristinaespiralis
ATCC 25486]
gi|197718641|gb|EDY62549.1| 3-hydroxyacyl-CoA dehydrogenase [Streptomyces pristinaespiralis
ATCC 25486]
Length=251
Score = 316 bits (809), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/253 (68%), Positives = 198/253 (79%), Gaps = 5/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDD---VVGGLGDRARFAQADV 57
M+T AVVTGGASGLGLAT +RL+ GAQVV++DL D V +G A F+ DV
Sbjct 1 MQTSGISAVVTGGASGLGLATARRLIAGGAQVVLLDLPSSDGEAVAKEIG--AVFSPGDV 58
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
T +A + A+ A +L P+RV VNCAGTGNAIR +DG FPL +F +I+ INLVGTFNV
Sbjct 59 TSQADAATAVRTAAALAPLRVAVNCAGTGNAIRTFGKDGPFPLDSFNRIIQINLVGTFNV 118
Query 118 LRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
LRL A +A+ + + ERGVI+NTASVAA+DGQIGQAAYSASKGGVVGMTLPIARDLA+
Sbjct 119 LRLAASAMAENDEVDGERGVIVNTASVAAYDGQIGQAAYSASKGGVVGMTLPIARDLATL 178
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
IRV+TIAPGLF TPLL +LP EA+ SLG QVPHPSRLG+PDEY AL HII NPMLNGE
Sbjct 179 KIRVMTIAPGLFRTPLLGALPQEAQDSLGAQVPHPSRLGDPDEYAALAEHIIHNPMLNGE 238
Query 238 VIRLDGAIRMAPR 250
VIRLDGAIRMAPR
Sbjct 239 VIRLDGAIRMAPR 251
>gi|111020381|ref|YP_703353.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
gi|110819911|gb|ABG95195.1| probable 3-hydroxyacyl-CoA dehydrogenase [Rhodococcus jostii
RHA1]
Length=253
Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 166/253 (66%), Positives = 192/253 (76%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDD---VVGGLGDRARFAQADV 57
MK AVAVVTGGASGLG AT + L + GAQVV++DL D +G A F ADV
Sbjct 1 MKIDGAVAVVTGGASGLGNATARALHERGAQVVLLDLPSSDGEVAAKEIGKGAYFTAADV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
T V++A++ A SLG +RVVVNCAG +VL + GV PLA F ++V INLVGTFNV
Sbjct 61 TSAGDVTSAIDFAASLGDLRVVVNCAGIATPGKVLGKAGVLPLADFERVVRINLVGTFNV 120
Query 118 LRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
LRL AE+IA+TEP+ ERGVII+TASVAAFDGQIGQ AY+ASKGGV MTLPIAR+LA
Sbjct 121 LRLAAEKIAQTEPVDGERGVIIDTASVAAFDGQIGQPAYAASKGGVAAMTLPIARELARH 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
LIRVVTIAPG+F+TP++A LP EA+ SLGQQVPHPSRLG EY AL HII+N MLNGE
Sbjct 181 LIRVVTIAPGIFETPMMAGLPEEAQKSLGQQVPHPSRLGKATEYAALAAHIIDNAMLNGE 240
Query 238 VIRLDGAIRMAPR 250
IRLDGAIRM PR
Sbjct 241 TIRLDGAIRMGPR 253
>gi|333919401|ref|YP_004492982.1| putative 3-hydroxyacyl-CoA dehydrogenase [Amycolicicoccus subflavus
DQS3-9A1]
gi|333481622|gb|AEF40182.1| putative 3-hydroxyacyl-CoA dehydrogenase [Amycolicicoccus subflavus
DQS3-9A1]
Length=253
Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 163/253 (65%), Positives = 191/253 (76%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDL---RGDDVVGGLGDRARFAQADV 57
M +VAV++GGASGLG AT K L GA+VV++DL RGDD +GD A F DV
Sbjct 1 MDINGSVAVISGGASGLGHATAKALNKLGAKVVLLDLPSPRGDDAAREIGDGAVFIPTDV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
T A+ A LG +RV VNCAG +VL R GV PL F ++V INLVGTFNV
Sbjct 61 TSAEQAEAAIGQAAELGDIRVAVNCAGVATPGKVLGRRGVLPLEDFERVVRINLVGTFNV 120
Query 118 LRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
+RL AE+++KTEPI ERGVII+TASVAAFDGQIGQAAY+ASKGGV +TLP+AR+LAS
Sbjct 121 IRLAAEKMSKTEPINGERGVIIDTASVAAFDGQIGQAAYAASKGGVAALTLPVARELASH 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
LIRVVT+APG+F+TP+L LP EA+ SLGQQVPHPSRLG P EY ALV HII+NPMLNGE
Sbjct 181 LIRVVTVAPGIFETPMLLGLPEEAQKSLGQQVPHPSRLGKPGEYAALVTHIIDNPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
IRLDGAIRMAP+
Sbjct 241 TIRLDGAIRMAPK 253
>gi|302546884|ref|ZP_07299226.1| short-chain dehydrogenase/reductase family oxidoreductase [Streptomyces
hygroscopicus ATCC 53653]
gi|302464502|gb|EFL27595.1| short-chain dehydrogenase/reductase family oxidoreductase [Streptomyces
himastatinicus ATCC 53653]
Length=252
Score = 312 bits (800), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 157/252 (63%), Positives = 192/252 (77%), Gaps = 2/252 (0%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVV--DLRGDDVVGGLGDRARFAQADVT 58
M+ + +VA+VTGGASGLGLA + L D GA+VV+V G +V LG + DVT
Sbjct 1 MRIEGSVALVTGGASGLGLAAVRELRDRGARVVIVGRSSTGKEVAEELGPGVHHSPGDVT 60
Query 59 DEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVL 118
E +++A+ELA++LGP+R+ V+CAG GNA R + R G FPLAAF K++ +NL+GTFNV+
Sbjct 61 SEEDIASAIELAETLGPLRIAVSCAGIGNAFRTVGRTGPFPLAAFSKVIQVNLIGTFNVI 120
Query 119 RLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASKL 178
RL A R+ + E GEERGVI+NTAS AAFDGQIGQAAY+ASKGG+VGMTLPIARDLA
Sbjct 121 RLAAARMHEREGDGEERGVIVNTASTAAFDGQIGQAAYAASKGGIVGMTLPIARDLAESG 180
Query 179 IRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGEV 238
IRVVTIAPGLF TP+ PA +LGQQVPHP+RLG P E+ LV HI+ENPMLNGE
Sbjct 181 IRVVTIAPGLFRTPMFDGFPASTLDALGQQVPHPARLGEPAEFATLVAHIVENPMLNGET 240
Query 239 IRLDGAIRMAPR 250
IRLDGA+RMAPR
Sbjct 241 IRLDGALRMAPR 252
>gi|88856493|ref|ZP_01131151.1| 3-hydroxyacyl-CoA dehydrogenase [marine actinobacterium PHSC20C1]
gi|88814360|gb|EAR24224.1| 3-hydroxyacyl-CoA dehydrogenase [marine actinobacterium PHSC20C1]
Length=251
Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 157/253 (63%), Positives = 187/253 (74%), Gaps = 5/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDL---RGDDVVGGLGDRARFAQADV 57
M +DA A++TGGASGLGLAT + L GA+V + DL RG ++ G +FA DV
Sbjct 1 MIIQDAAALITGGASGLGLATARALAAQGAKVTIADLPSSRGAEIAAEHG--FQFAPTDV 58
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
EA V A+ LA S GP+R+VVNCAG + L R GV PL F ++ INL GTFNV
Sbjct 59 RSEADVQAAVALATSTGPLRIVVNCAGVATPGKTLGRKGVLPLETFEMVIGINLTGTFNV 118
Query 118 LRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
+RL A + +TEPI ERGVI+NTASVAAFDGQIGQ AY+ASK GV GMTLP+AR+ AS
Sbjct 119 IRLAAAAMVETEPIDGERGVIVNTASVAAFDGQIGQPAYAASKAGVAGMTLPLAREFASA 178
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
+RV+TIAPG+F+TP++A LP EA+ SLG QVPHPSRLG PDEY ALV HI+ENPMLNGE
Sbjct 179 QVRVMTIAPGIFETPMMAGLPQEAQDSLGAQVPHPSRLGRPDEYAALVKHIVENPMLNGE 238
Query 238 VIRLDGAIRMAPR 250
VIRLDGAIRM PR
Sbjct 239 VIRLDGAIRMQPR 251
>gi|325962069|ref|YP_004239975.1| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase
-like protein [Arthrobacter phenanthrenivorans Sphe3]
gi|323468156|gb|ADX71841.1| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase
-like protein [Arthrobacter phenanthrenivorans Sphe3]
Length=264
Score = 305 bits (782), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 160/264 (61%), Positives = 189/264 (72%), Gaps = 14/264 (5%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDD---------VVGGLGDRAR 51
M VA+VTGGASGLG AT +RL D GA VV+VDL + G G A
Sbjct 1 MDVAGTVALVTGGASGLGAATARRLFDGGASVVLVDLPSSEGGTLADELNAAGTAGRSAV 60
Query 52 FAQADVTDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINL 111
F ADVT E V A+E A LGP+R+VVNCAG +VL R+GV PL AF +++ +NL
Sbjct 61 FCPADVTSEEEVRAAVETAAGLGPLRIVVNCAGIATPGKVLGREGVLPLEAFTRVIQVNL 120
Query 112 VGTFNVLRLGAERIAKTEPI-----GEERGVIINTASVAAFDGQIGQAAYSASKGGVVGM 166
VGTFNVLRL A+ +A TEP G ERGVIINTASVAAF+GQIGQ AY+ASKG V M
Sbjct 121 VGTFNVLRLAAQAMAATEPAVTLLGGPERGVIINTASVAAFEGQIGQPAYAASKGAVAAM 180
Query 167 TLPIARDLASKLIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVL 226
TLPIAR+LA L+RVVTIAPG+F+TP++A LP EA+ SLG QVPHPSRLG P+EY +LV
Sbjct 181 TLPIARELARSLVRVVTIAPGIFETPMMAGLPQEAQDSLGAQVPHPSRLGRPEEYASLVA 240
Query 227 HIIENPMLNGEVIRLDGAIRMAPR 250
HI++N MLNGE IRLDGAIRM P+
Sbjct 241 HIVDNAMLNGETIRLDGAIRMGPK 264
>gi|260904165|ref|ZP_05912487.1| short-chain dehydrogenase/reductase SDR [Brevibacterium linens
BL2]
Length=253
Score = 304 bits (779), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 156/253 (62%), Positives = 186/253 (74%), Gaps = 3/253 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLR---GDDVVGGLGDRARFAQADV 57
M + VA+VTGGASGLG ATT+RLL AGAQVV+VDL G V LG A F ADV
Sbjct 1 MDLNNTVALVTGGASGLGRATTERLLAAGAQVVMVDLNAEVGQQVAAELGSSAHFVSADV 60
Query 58 TDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNV 117
T+E V A++ A LG +RVVVNCAG +++SR G PL AF K++ IN+VGT NV
Sbjct 61 TNEEQVQAAVDTATGLGLLRVVVNCAGVATPGKLVSRKGPLPLDAFSKVLSINVVGTVNV 120
Query 118 LRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASK 177
RL A + E +GEERGVI+NTASVAAFDGQIGQ AYSASKG + +TLP+AR+LAS
Sbjct 121 CRLAAAAMQAQESVGEERGVIVNTASVAAFDGQIGQIAYSASKGAIASVTLPMARELASS 180
Query 178 LIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGE 237
IRVVTIAPG+F+TP++A LP EA+ SL + +PHPSRLG P EY LV I+ NPMLNGE
Sbjct 181 QIRVVTIAPGIFETPMMAGLPEEAQESLAKSIPHPSRLGKPAEYAQLVESIVANPMLNGE 240
Query 238 VIRLDGAIRMAPR 250
IRLDGAIRMAP+
Sbjct 241 TIRLDGAIRMAPK 253
>gi|149180891|ref|ZP_01859393.1| 3-hydroxyacyl-CoA dehydrogenase [Bacillus sp. SG-1]
gi|148851410|gb|EDL65558.1| 3-hydroxyacyl-CoA dehydrogenase [Bacillus sp. SG-1]
Length=255
Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/255 (60%), Positives = 191/255 (75%), Gaps = 5/255 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDL---RGDDVVGGLGDRARFAQADV 57
MK + +A+VTGGASGLG +T ++++ G + ++DL RG +VG LG++A F + DV
Sbjct 1 MKVSETIAIVTGGASGLGESTVRQIIKQGGKAAILDLSEERGQSLVGELGEKAIFVKTDV 60
Query 58 TDEAAVSNALELA-DSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFN 116
T E V+NA+++A +S G + VVNCAG G A ++LSR G+ L F K++ INL+G+FN
Sbjct 61 TSEKEVTNAIQIAVESFGSINAVVNCAGIGVASKLLSRKGIHSLDLFTKVISINLIGSFN 120
Query 117 VLRLGAERIAKTEPIGE-ERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLA 175
V+RL + +++K EP ERGVIINTASVAAF+GQIGQAAYSASKGG+VGMTLPIAR+LA
Sbjct 121 VIRLASHQMSKNEPNEHGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARELA 180
Query 176 SKLIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLN 235
S IRV+TIAPGLF TP+ SLPAEA SLG+ VP P RLG P EY LV II NPMLN
Sbjct 181 SYGIRVMTIAPGLFHTPMFESLPAEAIDSLGKMVPFPPRLGQPSEYALLVESIITNPMLN 240
Query 236 GEVIRLDGAIRMAPR 250
GE IRLDG IRM P+
Sbjct 241 GETIRLDGGIRMQPK 255
>gi|220911515|ref|YP_002486824.1| short-chain dehydrogenase/reductase SDR [Arthrobacter chlorophenolicus
A6]
gi|219858393|gb|ACL38735.1| short-chain dehydrogenase/reductase SDR [Arthrobacter chlorophenolicus
A6]
Length=267
Score = 299 bits (765), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 158/267 (60%), Positives = 189/267 (71%), Gaps = 17/267 (6%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDL---RGDDV---------VGGLGD 48
M + + A++TGGASGLG AT + L AGA VV+VDL G ++ G G
Sbjct 1 MDVRGSAALITGGASGLGAATARALFQAGASVVLVDLPSSAGAELAQELNASVETGTSGK 60
Query 49 RARFAQADVTDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVD 108
A FA ADVT E V A+ A LGP+R+VVNCAG +VL RDGV PL AF +++
Sbjct 61 SAVFAPADVTSETEVRAAVATASGLGPLRIVVNCAGIATPGKVLGRDGVLPLEAFTRVIQ 120
Query 109 INLVGTFNVLRLGAERIAKTEPI-----GEERGVIINTASVAAFDGQIGQAAYSASKGGV 163
+NL+GTFNV+RL AE + TEP G ERGVIINTASVAAF+GQIGQ AY+ASKG V
Sbjct 121 VNLIGTFNVIRLAAEAMVATEPASTELGGPERGVIINTASVAAFEGQIGQPAYAASKGAV 180
Query 164 VGMTLPIARDLASKLIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGA 223
MTLPIAR+LA L+RVVTIAPG+F+TP++A LP EA+ SLG QVPHPSRLG P EY
Sbjct 181 AAMTLPIARELARSLVRVVTIAPGIFETPMMAGLPQEAQDSLGAQVPHPSRLGRPGEYAN 240
Query 224 LVLHIIENPMLNGEVIRLDGAIRMAPR 250
LVLHI++N MLNGE IRLDGAIRM P+
Sbjct 241 LVLHIVDNAMLNGETIRLDGAIRMGPK 267
>gi|335039687|ref|ZP_08532839.1| short-chain dehydrogenase/reductase SDR [Caldalkalibacillus thermarum
TA2.A1]
gi|334180446|gb|EGL83059.1| short-chain dehydrogenase/reductase SDR [Caldalkalibacillus thermarum
TA2.A1]
Length=255
Score = 298 bits (763), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 153/255 (60%), Positives = 192/255 (76%), Gaps = 5/255 (1%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDL---RGDDVVGGLGDRARFAQADV 57
M ++ VAVVTGGASGLG AT K+++ G + V++DL +G + LG+ A F Q DV
Sbjct 1 MNIREKVAVVTGGASGLGEATVKKIVALGGKAVILDLAAEKGKQLSEALGEDALFIQTDV 60
Query 58 TDEAAVSNALELA-DSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFN 116
T EA V AL+ + ++ G + + VNCAG G A +VLS++ LA+F +++ +NL+GTFN
Sbjct 61 TSEADVQKALQQSLETFGAIHIAVNCAGIGIAEKVLSKNKTHSLASFSRVIQVNLIGTFN 120
Query 117 VLRLGAERIAKTEPIGE-ERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLA 175
V+RL AE++ P + ERGVIINTASVAAF+GQIGQAAYSASKGGVVGMTLPIAR+LA
Sbjct 121 VIRLAAEKMVDNTPTEDGERGVIINTASVAAFEGQIGQAAYSASKGGVVGMTLPIARELA 180
Query 176 SKLIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLN 235
IRV+TIAPGLFDTPL ASLP EA+ +LG VP PSRLG+P+EY LV I+ENPMLN
Sbjct 181 RYGIRVMTIAPGLFDTPLFASLPEEARKALGASVPFPSRLGHPEEYARLVQSIVENPMLN 240
Query 236 GEVIRLDGAIRMAPR 250
GE IRLDGA+RM PR
Sbjct 241 GETIRLDGALRMPPR 255
>gi|119962904|ref|YP_946556.1| 3-hydroxyacyl-CoA dehydrogenase [Arthrobacter aurescens TC1]
gi|119949763|gb|ABM08674.1| 3-hydroxyacyl-CoA dehydrogenase [Arthrobacter aurescens TC1]
Length=264
Score = 298 bits (763), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 159/261 (61%), Positives = 187/261 (72%), Gaps = 14/261 (5%)
Query 1 MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDL---RGD------DVVGGLGDRAR 51
M K VA+VTGGASGLG AT KRL DAGA VV+VDL GD + G RA
Sbjct 1 MDIKGTVALVTGGASGLGAATAKRLFDAGASVVLVDLPQSAGDAYAAELNAAGSGEARAV 60
Query 52 FAQADVTDEAAVSNALELADSLGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINL 111
FA ADVT+E+ V A+ A +LGP+R+VVNCAG +VL R+GV PL F K++ INL
Sbjct 61 FAPADVTNESQVQAAVHAAMALGPLRIVVNCAGIATPGKVLGREGVLPLETFNKVIQINL 120
Query 112 VGTFNVLRLGAERIAKTEPI-----GEERGVIINTASVAAFDGQIGQAAYSASKGGVVGM 166
VGTFNV+RL A + +TEP+ G ERGVIINTASVAAF+GQIGQ AY+ASKG V M
Sbjct 121 VGTFNVIRLAAAAMVETEPVSTELGGPERGVIINTASVAAFEGQIGQPAYAASKGAVAAM 180
Query 167 TLPIARDLASKLIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVL 226
TLP+AR+ A LIRV TIAPG+F+TP++A LP A+ SLGQQVPHP+RLG EY L
Sbjct 181 TLPLAREFARSLIRVATIAPGIFETPMMAGLPQSAQDSLGQQVPHPARLGRAAEYANLAA 240
Query 227 HIIENPMLNGEVIRLDGAIRM 247
HI+EN MLNGE IRLDGAIRM
Sbjct 241 HIVENAMLNGETIRLDGAIRM 261
Lambda K H
0.319 0.137 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 358945203960
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40