BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1149 Length=135 Score E Sequences producing significant alignments: (Bits) Value gi|15608182|ref|NP_215558.1| IS like-2 transposase [Mycobacteriu... 274 4e-72 gi|31792233|ref|NP_854726.1| putative IS like-2 transposase [Myc... 271 2e-71 gi|339294042|gb|AEJ46153.1| putative IS like-2 transposase [Myco... 266 1e-69 gi|340626163|ref|YP_004744615.1| transposase [Mycobacterium cane... 262 1e-68 gi|298524539|ref|ZP_07011948.1| transposase [Mycobacterium tuber... 256 1e-66 gi|323720499|gb|EGB29582.1| transposase [Mycobacterium tuberculo... 247 5e-64 gi|581366|emb|CAA46571.1| transposase [Mycobacterium tuberculosi... 244 2e-63 gi|307079017|ref|ZP_07488187.1| hypothetical protein TMKG_01535 ... 243 5e-63 gi|308378803|ref|ZP_07483950.2| hypothetical protein TMJG_02716 ... 233 6e-60 gi|308370588|ref|ZP_07422067.2| transposase [Mycobacterium tuber... 232 1e-59 gi|308374180|ref|ZP_07435134.2| hypothetical protein TMFG_02865 ... 224 3e-57 gi|308371840|ref|ZP_07426420.2| hypothetical protein TMDG_03654 ... 209 1e-52 gi|308398325|ref|ZP_07492692.2| hypothetical protein TMLG_01752 ... 208 3e-52 gi|308373010|ref|ZP_07430732.2| hypothetical protein TMEG_00930 ... 207 4e-52 gi|308231710|ref|ZP_07413520.2| transposase [Mycobacterium tuber... 177 6e-43 gi|308376595|ref|ZP_07439388.2| hypothetical protein TMHG_00220 ... 175 2e-42 gi|296164081|ref|ZP_06846703.1| IS5 family transposase [Mycobact... 173 8e-42 gi|33867219|ref|NP_898777.1| putative transposase [Rhodococcus e... 155 2e-36 gi|226349998|ref|YP_002777111.1| putative transposase orfA for i... 150 5e-35 gi|211907913|gb|ACJ12433.1| transposase [Rhodococcus sp. T104] 137 5e-31 gi|340793158|ref|YP_004758621.1| transposase for insertion seque... 133 7e-30 gi|111026161|ref|YP_708444.1| transposase [Rhodococcus jostii RH... 127 5e-28 gi|336325708|ref|YP_004605674.1| transposase for insertion seque... 127 5e-28 gi|240170681|ref|ZP_04749340.1| transposase [Mycobacterium kansa... 125 3e-27 gi|260904068|ref|ZP_05912390.1| transposase [Brevibacterium line... 124 4e-27 gi|289705296|ref|ZP_06501695.1| conserved hypothetical protein [... 120 6e-26 gi|325963571|ref|YP_004241477.1| ATP dependent DNA ligase-like p... 120 1e-25 gi|226349345|ref|YP_002776459.1| putative transposase orfA for i... 119 1e-25 gi|226349578|ref|YP_002776692.1| putative transposase orfA for i... 119 2e-25 gi|315063831|gb|ADT78170.1| transposase [Rhodococcus sp. NCIMB 1... 118 3e-25 gi|319947792|ref|ZP_08021987.1| transposase [Dietzia cinnamea P4... 118 3e-25 gi|145296939|ref|YP_001139760.1| hypothetical protein cgR_2839 [... 115 2e-24 gi|108805310|ref|YP_645247.1| putative transposase [Rubrobacter ... 112 2e-23 gi|344043336|gb|EGV39033.1| hypothetical protein CgS9114_15093 [... 110 9e-23 gi|50954104|ref|YP_061392.1| transposase [Leifsonia xyli subsp. ... 110 9e-23 gi|257067256|ref|YP_003153511.1| transposase [Brachybacterium fa... 109 1e-22 gi|120401312|ref|YP_951141.1| transposase [Mycobacterium vanbaal... 109 1e-22 gi|315501927|ref|YP_004080814.1| transposase [Micromonospora sp.... 109 2e-22 gi|29831009|ref|NP_825643.1| IS1648-like transposase [Streptomyc... 109 2e-22 gi|257069701|ref|YP_003155956.1| transposase [Brachybacterium fa... 108 2e-22 gi|336117268|ref|YP_004572035.1| putative transposase [Microluna... 108 2e-22 gi|308377594|ref|ZP_07479761.2| hypothetical protein TMIG_03610 ... 108 3e-22 gi|108805303|ref|YP_645240.1| transposase [Rubrobacter xylanophi... 108 3e-22 gi|345008073|ref|YP_004810427.1| transposase IS4 family protein ... 107 4e-22 gi|344999700|ref|YP_004802554.1| putative IS1648 transposase [St... 107 7e-22 gi|296164148|ref|ZP_06846760.1| transposase [Mycobacterium paras... 107 7e-22 gi|291444284|ref|ZP_06583674.1| transposase [Streptomyces roseos... 106 1e-21 gi|21233965|ref|NP_639744.1| putative is1648 transposase [Strept... 106 1e-21 gi|182433880|ref|YP_001821599.1| putative transposase [Streptomy... 105 2e-21 gi|167006331|ref|YP_001661554.1| transposase [Streptomyces sp. H... 105 2e-21 >gi|15608182|ref|NP_215558.1| IS like-2 transposase [Mycobacterium tuberculosis H37Rv] gi|15608289|ref|NP_215665.1| transposase [Mycobacterium tuberculosis H37Rv] gi|31792343|ref|NP_854836.1| transposase [Mycobacterium bovis AF2122/97] 58 more sequence titles Length=135 Score = 274 bits (700), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 134/135 (99%), Positives = 135/135 (100%), Gaps = 0/135 (0%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 +TRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW Sbjct 1 MTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD Sbjct 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 Query 121 TLATGGTVGLQEIRR 135 TLATGGTVGLQEIRR Sbjct 121 TLATGGTVGLQEIRR 135 >gi|31792233|ref|NP_854726.1| putative IS like-2 transposase [Mycobacterium bovis AF2122/97] gi|121636971|ref|YP_977194.1| putative IS like-2 transposase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|289442581|ref|ZP_06432325.1| transposase [Mycobacterium tuberculosis T46] 16 more sequence titles Length=135 Score = 271 bits (693), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 133/135 (99%), Positives = 134/135 (99%), Gaps = 0/135 (0%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 +TRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW Sbjct 1 MTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD Sbjct 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 Query 121 TLATGGTVGLQEIRR 135 TLATGGTV LQEIRR Sbjct 121 TLATGGTVELQEIRR 135 >gi|339294042|gb|AEJ46153.1| putative IS like-2 transposase [Mycobacterium tuberculosis CCDC5079] gi|339294140|gb|AEJ46251.1| putative IS like-2 transposase [Mycobacterium tuberculosis CCDC5079] gi|339297682|gb|AEJ49792.1| putative IS like-2 transposase [Mycobacterium tuberculosis CCDC5180] gi|339297781|gb|AEJ49891.1| putative IS like-2 transposase [Mycobacterium tuberculosis CCDC5180] Length=132 Score = 266 bits (679), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 130/132 (99%), Positives = 131/132 (99%), Gaps = 0/132 (0%) Query 4 VGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTV 63 +GVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTV Sbjct 1 MGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTV 60 Query 64 WKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTLA 123 WKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTLA Sbjct 61 WKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTLA 120 Query 124 TGGTVGLQEIRR 135 TGGTV LQEIRR Sbjct 121 TGGTVELQEIRR 132 >gi|340626163|ref|YP_004744615.1| transposase [Mycobacterium canettii CIPT 140010059] gi|340004353|emb|CCC43496.1| transposase [Mycobacterium canettii CIPT 140010059] Length=308 Score = 262 bits (670), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 124/132 (94%), Positives = 127/132 (97%), Gaps = 0/132 (0%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 +TRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW Sbjct 1 MTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD Sbjct 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 Query 121 TLATGGTVGLQE 132 TLATG ++ Sbjct 121 TLATGALSNYKK 132 >gi|298524539|ref|ZP_07011948.1| transposase [Mycobacterium tuberculosis 94_M4241A] gi|298494333|gb|EFI29627.1| transposase [Mycobacterium tuberculosis 94_M4241A] Length=305 Score = 256 bits (653), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 121/122 (99%), Positives = 122/122 (100%), Gaps = 0/122 (0%) Query 4 VGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTV 63 +GVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTV Sbjct 1 MGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTV 60 Query 64 WKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTLA 123 WKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTLA Sbjct 61 WKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTLA 120 Query 124 TG 125 TG Sbjct 121 TG 122 >gi|323720499|gb|EGB29582.1| transposase [Mycobacterium tuberculosis CDC1551A] Length=133 Score = 247 bits (630), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 124/133 (94%), Positives = 125/133 (94%), Gaps = 1/133 (0%) Query 4 VGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTV 63 +GVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTV Sbjct 1 MGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTV 60 Query 64 WKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGAC-SDTL 122 WKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGA Sbjct 61 WKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGAVLGHAR 120 Query 123 ATGGTVGLQEIRR 135 GGTVGLQEIRR Sbjct 121 HDGGTVGLQEIRR 133 >gi|581366|emb|CAA46571.1| transposase [Mycobacterium tuberculosis H37Rv] Length=308 Score = 244 bits (624), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 116/118 (99%), Positives = 117/118 (99%), Gaps = 0/118 (0%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 +TRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW Sbjct 1 MTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGAC 118 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGA Sbjct 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGAA 118 >gi|307079017|ref|ZP_07488187.1| hypothetical protein TMKG_01535 [Mycobacterium tuberculosis SUMu011] gi|308363083|gb|EFP51934.1| hypothetical protein TMKG_01535 [Mycobacterium tuberculosis SUMu011] Length=134 Score = 243 bits (621), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 120/134 (90%), Positives = 122/134 (92%), Gaps = 0/134 (0%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 +TRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW Sbjct 1 MTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRA GACSD Sbjct 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRARPAFGGACSD 120 Query 121 TLATGGTVGLQEIR 134 TLATG + R Sbjct 121 TLATGALSDYKNRR 134 >gi|308378803|ref|ZP_07483950.2| hypothetical protein TMJG_02716 [Mycobacterium tuberculosis SUMu010] gi|308359172|gb|EFP48023.1| hypothetical protein TMJG_02716 [Mycobacterium tuberculosis SUMu010] Length=113 Score = 233 bits (594), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 113/113 (100%), Positives = 113/113 (100%), Gaps = 0/113 (0%) Query 19 MPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWKRHHRWSLDGTCDE 78 MPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWKRHHRWSLDGTCDE Sbjct 1 MPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWKRHHRWSLDGTCDE 60 Query 79 VFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTLATGGTVGLQ 131 VFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTLATGGTVGLQ Sbjct 61 VFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTLATGGTVGLQ 113 >gi|308370588|ref|ZP_07422067.2| transposase [Mycobacterium tuberculosis SUMu003] gi|308331472|gb|EFP20323.1| transposase [Mycobacterium tuberculosis SUMu003] Length=113 Score = 232 bits (591), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 112/113 (99%), Positives = 113/113 (100%), Gaps = 0/113 (0%) Query 14 VVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWKRHHRWSLD 73 +VEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWKRHHRWSLD Sbjct 1 MVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWKRHHRWSLD 60 Query 74 GTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTLATGG 126 GTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTLATGG Sbjct 61 GTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTLATGG 113 >gi|308374180|ref|ZP_07435134.2| hypothetical protein TMFG_02865 [Mycobacterium tuberculosis SUMu006] gi|308342761|gb|EFP31612.1| hypothetical protein TMFG_02865 [Mycobacterium tuberculosis SUMu006] Length=110 Score = 224 bits (571), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 109/110 (99%), Positives = 110/110 (100%), Gaps = 0/110 (0%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 +TRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW Sbjct 1 MTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRA 110 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRA Sbjct 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRA 110 >gi|308371840|ref|ZP_07426420.2| hypothetical protein TMDG_03654 [Mycobacterium tuberculosis SUMu004] gi|308335282|gb|EFP24133.1| hypothetical protein TMDG_03654 [Mycobacterium tuberculosis SUMu004] Length=102 Score = 209 bits (531), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 101/102 (99%), Positives = 102/102 (100%), Gaps = 0/102 (0%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 +TRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW Sbjct 1 MTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLS 102 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLS Sbjct 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLS 102 >gi|308398325|ref|ZP_07492692.2| hypothetical protein TMLG_01752 [Mycobacterium tuberculosis SUMu012] gi|308366735|gb|EFP55586.1| hypothetical protein TMLG_01752 [Mycobacterium tuberculosis SUMu012] Length=108 Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 101/101 (100%), Positives = 101/101 (100%), Gaps = 0/101 (0%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW Sbjct 8 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 67 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLL 101 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLL Sbjct 68 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLL 108 >gi|308373010|ref|ZP_07430732.2| hypothetical protein TMEG_00930 [Mycobacterium tuberculosis SUMu005] gi|308339089|gb|EFP27940.1| hypothetical protein TMEG_00930 [Mycobacterium tuberculosis SUMu005] Length=101 Score = 207 bits (527), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 100/101 (99%), Positives = 101/101 (100%), Gaps = 0/101 (0%) Query 6 VISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWK 65 +ISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWK Sbjct 1 MISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWK 60 Query 66 RHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDST 106 RHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDST Sbjct 61 RHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDST 101 >gi|308231710|ref|ZP_07413520.2| transposase [Mycobacterium tuberculosis SUMu001] gi|308216282|gb|EFO75681.1| transposase [Mycobacterium tuberculosis SUMu001] Length=91 Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 84/84 (100%), Positives = 84/84 (100%), Gaps = 0/84 (0%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW Sbjct 8 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 67 Query 61 QTVWKRHHRWSLDGTCDEVFAHVA 84 QTVWKRHHRWSLDGTCDEVFAHVA Sbjct 68 QTVWKRHHRWSLDGTCDEVFAHVA 91 >gi|308376595|ref|ZP_07439388.2| hypothetical protein TMHG_00220 [Mycobacterium tuberculosis SUMu008] gi|308350562|gb|EFP39413.1| hypothetical protein TMHG_00220 [Mycobacterium tuberculosis SUMu008] Length=84 Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 83/84 (99%), Positives = 84/84 (100%), Gaps = 0/84 (0%) Query 18 LMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWKRHHRWSLDGTCD 77 +MPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWKRHHRWSLDGTCD Sbjct 1 MMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWKRHHRWSLDGTCD 60 Query 78 EVFAHVAAVFGVDAEVAEDIEKLL 101 EVFAHVAAVFGVDAEVAEDIEKLL Sbjct 61 EVFAHVAAVFGVDAEVAEDIEKLL 84 >gi|296164081|ref|ZP_06846703.1| IS5 family transposase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900566|gb|EFG79950.1| IS5 family transposase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=99 Score = 173 bits (438), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 83/99 (84%), Positives = 87/99 (88%), Gaps = 0/99 (0%) Query 14 VVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWKRHHRWSLD 73 +VEPLMPSH+GK G RF DHRLILE IAW FRTG PWRDLPAEFGPWQTVWKRHHRWSLD Sbjct 1 MVEPLMPSHDGKRGNRFRDHRLILEAIAWHFRTGCPWRDLPAEFGPWQTVWKRHHRWSLD 60 Query 74 GTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQ 112 GT DE+FA VAA FG DA+V DIEKLLSVDSTNVRAHQ Sbjct 61 GTYDEMFARVAASFGFDADVHADIEKLLSVDSTNVRAHQ 99 >gi|33867219|ref|NP_898777.1| putative transposase [Rhodococcus erythropolis] gi|33669053|gb|AAP74047.1| putative transposase [Rhodococcus erythropolis] Length=147 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 78/128 (61%), Positives = 95/128 (75%), Gaps = 4/128 (3%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 V R ISD+ WAV+EP++P+ G+ GR ++DHRL LEGIAWRFRTGSPWRDLP FGPW Sbjct 23 VLRADEISDDLWAVIEPVLPASAGRRGRPWNDHRLTLEGIAWRFRTGSPWRDLPEYFGPW 82 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 Q++W+RH RWS DGT +F AAV E E +E+LLS+DST VRAHQHSAGA +D Sbjct 83 QSIWERHRRWSDDGTYIRMF---AAVRAAAPEREEQLERLLSIDSTIVRAHQHSAGALTD 139 Query 121 TLATGGTV 128 TGG+V Sbjct 140 A-HTGGSV 146 >gi|226349998|ref|YP_002777111.1| putative transposase orfA for insertion sequence element [Rhodococcus opacus B4] gi|226245910|dbj|BAH47174.1| putative transposase orfA for insertion sequence element [Rhodococcus opacus B4] Length=125 Score = 150 bits (380), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 76/128 (60%), Positives = 94/128 (74%), Gaps = 4/128 (3%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 + R I D+ WAV+EP++P+ G+ GR ++DHRL LEGIAWRFRTGSPWRDLP FGPW Sbjct 1 MLRADEIPDDLWAVIEPVLPALAGRRGRPWNDHRLTLEGIAWRFRTGSPWRDLPEYFGPW 60 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 Q++W+RH RWS DGT +F AAV E E +E+LLS+DST VRAHQHSAGA +D Sbjct 61 QSIWERHRRWSDDGTYIRMF---AAVRAAAPEREEQLERLLSIDSTIVRAHQHSAGALTD 117 Query 121 TLATGGTV 128 TGG+V Sbjct 118 A-HTGGSV 124 >gi|211907913|gb|ACJ12433.1| transposase [Rhodococcus sp. T104] Length=122 Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 69/126 (55%), Positives = 92/126 (74%), Gaps = 4/126 (3%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 +TR GVISD+ W V+ +MP+ + GR ++DHR+ LE I WRFRTGSPWRD+P EFG W Sbjct 1 MTRSGVISDDLWEVLAEVMPTSCPRRGRPWNDHRVTLEAICWRFRTGSPWRDIPDEFGAW 60 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 Q++W+RH RWS+DGT + +F V AV VD E + L+S+DST+VRAHQH+AGA + Sbjct 61 QSIWERHKRWSIDGTYEAMFRAVHAVRDVDDEA---LAALVSIDSTSVRAHQHAAGAPA- 116 Query 121 TLATGG 126 +TGG Sbjct 117 ARSTGG 122 >gi|340793158|ref|YP_004758621.1| transposase for insertion sequence element [Corynebacterium variabile DSM 44702] gi|340794332|ref|YP_004759795.1| hypothetical protein CVAR_1366 [Corynebacterium variabile DSM 44702] gi|340795452|ref|YP_004760915.1| hypothetical protein CVAR_2497 [Corynebacterium variabile DSM 44702] 13 more sequence titles Length=135 Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 66/130 (51%), Positives = 87/130 (67%), Gaps = 4/130 (3%) Query 3 RVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQT 62 R ++D+ WA +EPL+PS +G+ GR F + R ILEG+ +R+RTG PWRDLP FGPWQT Sbjct 6 RYQQLTDDQWARIEPLLPSSDGRRGRPFRNSRQILEGVIYRYRTGIPWRDLPEYFGPWQT 65 Query 63 VWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTL 122 VWKRH R+++DGT D + + A DA+ A I ++SVD+T RAHQH+ Sbjct 66 VWKRHRRYTVDGTWDRILQSLLA----DADAAGLISWIVSVDATINRAHQHATNTTRPEQ 121 Query 123 ATGGTVGLQE 132 TGGTV LQE Sbjct 122 HTGGTVELQE 131 >gi|111026161|ref|YP_708444.1| transposase [Rhodococcus jostii RHA1] gi|111026183|ref|YP_708466.1| transposase [Rhodococcus jostii RHA1] gi|110825004|gb|ABH00286.1| possible transposase [Rhodococcus jostii RHA1] gi|110825026|gb|ABH00308.1| possible transposase [Rhodococcus jostii RHA1] Length=131 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 65/132 (50%), Positives = 88/132 (67%), Gaps = 7/132 (5%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 V R V++D+ W ++ L+PS +G GR+F + RL++EG+ +R RTG PWRDLPA FGPW Sbjct 5 VNRFEVLTDKQWELLALLLPSSDGLRGRKFQNSRLVVEGMLYRLRTGLPWRDLPAHFGPW 64 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 +TVWKRH R++ DGT D V +AA+ A+ D++ +SVDST VR HQH A A D Sbjct 65 KTVWKRHRRYAGDGTWDRVLIALAAM----ADAGGDLDWAVSVDSTVVRVHQHGANAARD 120 Query 121 TLATGGTVGLQE 132 TGG+ L E Sbjct 121 ---TGGSTELHE 129 >gi|336325708|ref|YP_004605674.1| transposase for insertion sequence element [Corynebacterium resistens DSM 45100] gi|336325713|ref|YP_004605679.1| hypothetical protein CRES_1160 [Corynebacterium resistens DSM 45100] gi|336101690|gb|AEI09510.1| transposase for insertion sequence element [Corynebacterium resistens DSM 45100] gi|336101695|gb|AEI09515.1| hypothetical protein CRES_1160 [Corynebacterium resistens DSM 45100] Length=149 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 65/132 (50%), Positives = 87/132 (66%), Gaps = 5/132 (3%) Query 2 TRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLP-AEFGPW 60 +R +DE W +EPL+PS+EG+ G F D+R ++EGIA+R+RTG PWRDLP EFGPW Sbjct 16 SRFRQFTDEQWERIEPLLPSNEGRQGHPFRDNRKVVEGIAYRYRTGIPWRDLPREEFGPW 75 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 QTVWKRH R++ DGT D + + A +A+ A +++ +SVD+T RAHQH Sbjct 76 QTVWKRHARYARDGTWDRILQTILA----EADAAGEVDWNVSVDATICRAHQHGTNTTRP 131 Query 121 TLATGGTVGLQE 132 TGGTV QE Sbjct 132 EQDTGGTVESQE 143 >gi|240170681|ref|ZP_04749340.1| transposase [Mycobacterium kansasii ATCC 12478] Length=131 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 66/133 (50%), Positives = 86/133 (65%), Gaps = 7/133 (5%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 ++R+ V+SDE W+ +EP MP K GR F DHR ++E I WR+RTG PWRDLPAEFG W Sbjct 1 MSRLQVLSDEMWSQIEPSMPVASAKGGRPFRDHRTVVEAIIWRYRTGCPWRDLPAEFGAW 60 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 +T W+RH ++ DGT D + AV A A+ I+ +SVDST RAHQH A + Sbjct 61 KTAWRRHDQYGKDGTWDAIL----AVVLTAAADADRIDWAVSVDSTVNRAHQH---ATNL 113 Query 121 TLATGGTVGLQEI 133 TGGT+ LQE+ Sbjct 114 PRHTGGTLELQEL 126 >gi|260904068|ref|ZP_05912390.1| transposase [Brevibacterium linens BL2] Length=134 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 66/128 (52%), Positives = 83/128 (65%), Gaps = 5/128 (3%) Query 6 VISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAE-FGPWQTVW 64 V +DE W +EPL+PS+ GK R F ++R I+EGI +R+R G WRDLP E FGPWQTVW Sbjct 9 VFTDEQWEKIEPLLPSNVGKRARPFENNRRIVEGIVYRYRAGIAWRDLPREHFGPWQTVW 68 Query 65 KRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTLAT 124 KRH R++ DGT D V A V + DA+ A DI+ +SVD T RAHQH+ T Sbjct 69 KRHRRYAADGTWDRVLARVLS----DADAAGDIDWNISVDGTINRAHQHATNTTRLDQDT 124 Query 125 GGTVGLQE 132 GG V LQ+ Sbjct 125 GGYVELQK 132 >gi|289705296|ref|ZP_06501695.1| conserved hypothetical protein [Micrococcus luteus SK58] gi|289558046|gb|EFD51338.1| conserved hypothetical protein [Micrococcus luteus SK58] Length=137 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 64/133 (49%), Positives = 84/133 (64%), Gaps = 5/133 (3%) Query 2 TRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAE-FGPW 60 +R V +D W +EPL+PS++G+ G F +HR ++EGIA+R+RTG PWRDLP E FGPW Sbjct 6 SRYQVFTDAQWERIEPLLPSNQGRRGHPFGEHRRVVEGIAYRYRTGVPWRDLPREQFGPW 65 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 QTV KRH R++ DGT D V V A +A+ A I+ +SVD+T RAHQH+ Sbjct 66 QTVRKRHRRYAADGTWDRVLTQVLA----EADAAGMIDWAVSVDATIARAHQHATNTTRP 121 Query 121 TLATGGTVGLQEI 133 TGG QE Sbjct 122 DQDTGGRGESQET 134 >gi|325963571|ref|YP_004241477.1| ATP dependent DNA ligase-like protein [Arthrobacter phenanthrenivorans Sphe3] gi|323469658|gb|ADX73343.1| ATP dependent DNA ligase-like protein [Arthrobacter phenanthrenivorans Sphe3] Length=225 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 65/135 (49%), Positives = 87/135 (65%), Gaps = 7/135 (5%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 ++R V+SD WA ++PL+PS G+ GR F D R ++EGI +R+R G WRD+P EFGPW Sbjct 95 MSRSSVLSDSQWARIQPLLPSSAGRAGRPFRDDRRVVEGIIYRYRCGIAWRDVPTEFGPW 154 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 QT+WKRH R+S DGT D + + VDA+ A ++ +SVDST RAHQH A + Sbjct 155 QTLWKRHRRYSGDGTWDRLLDRLL----VDADDAGVLDWSVSVDSTINRAHQH---ATNL 207 Query 121 TLATGGTVGLQEIRR 135 TGG+V L E R Sbjct 208 PRTTGGSVELHESAR 222 >gi|226349345|ref|YP_002776459.1| putative transposase orfA for insertion sequence element [Rhodococcus opacus B4] gi|226349371|ref|YP_002776485.1| putative transposase orfA for insertion sequence element [Rhodococcus opacus B4] gi|226245260|dbj|BAH55607.1| putative transposase orfA for insertion sequence element [Rhodococcus opacus B4] gi|226245286|dbj|BAH55633.1| putative transposase orfA for insertion sequence element [Rhodococcus opacus B4] Length=131 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 61/134 (46%), Positives = 88/134 (66%), Gaps = 7/134 (5%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 V R V++D+ W ++ L+PS +G GR+F ++R+++EG+ +R RTG PWRDLP+ FGPW Sbjct 5 VDRFEVLTDKQWELLALLLPSSDGLRGRKFRNNRVVVEGMLYRLRTGLPWRDLPSHFGPW 64 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 +TVWKRH R++ DGT D V + A+ A+ +++ +SVDST VR HQH A A Sbjct 65 KTVWKRHRRYAGDGTWDRVLTALVAM----ADAGGNLDWAVSVDSTVVRVHQHGANAARH 120 Query 121 TLATGGTVGLQEIR 134 TGG+ L E R Sbjct 121 ---TGGSTELHEPR 131 >gi|226349578|ref|YP_002776692.1| putative transposase orfA for insertion sequence element [Rhodococcus opacus B4] gi|226245493|dbj|BAH55840.1| putative transposase orfA for insertion sequence element [Rhodococcus opacus B4] Length=131 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 60/132 (46%), Positives = 87/132 (66%), Gaps = 7/132 (5%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 V R V++D+ W ++ L+PS +G GR+F ++R+++EG+ +R RTG PWRDLP+ FGPW Sbjct 5 VDRFEVLTDKQWELLALLLPSSDGLRGRKFRNNRVVVEGMLYRLRTGLPWRDLPSHFGPW 64 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 +TVWKRH R++ DGT D V + A+ A+ +++ +SVDST VR HQH A A Sbjct 65 KTVWKRHRRYAGDGTWDRVLTALVAM----ADAGGNLDWAVSVDSTVVRVHQHGANAARH 120 Query 121 TLATGGTVGLQE 132 TGG+ L E Sbjct 121 ---TGGSTELHE 129 >gi|315063831|gb|ADT78170.1| transposase [Rhodococcus sp. NCIMB 12038] Length=138 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 60/134 (45%), Positives = 88/134 (66%), Gaps = 7/134 (5%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 V R V++D+ W ++ L+PS +G GR+F ++R+++EG+ +R RTG PWRDLP+ FGPW Sbjct 12 VDRFEVLTDKQWELLALLLPSSDGLRGRKFRNNRVVVEGMLYRLRTGLPWRDLPSHFGPW 71 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 +TVWKRH R++ DGT D V + A+ A+ +++ ++VDST VR HQH A A Sbjct 72 KTVWKRHRRYAGDGTWDRVLTALVAM----ADAGGNLDWAVAVDSTVVRVHQHGANAARH 127 Query 121 TLATGGTVGLQEIR 134 TGG+ L E R Sbjct 128 ---TGGSTELHEPR 138 >gi|319947792|ref|ZP_08021987.1| transposase [Dietzia cinnamea P4] gi|319438542|gb|EFV93467.1| transposase [Dietzia cinnamea P4] Length=139 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 63/132 (48%), Positives = 82/132 (63%), Gaps = 5/132 (3%) Query 2 TRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLP-AEFGPW 60 +R +DE W +EPL+PS+EG+ G F D+R ++EGI +R+R G PWRDLP EFG W Sbjct 6 SRFRQFTDEQWERIEPLLPSNEGRQGHPFRDNRKVVEGIIYRYRAGIPWRDLPREEFGAW 65 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 QTVWKRH R++ DGT D + + A DA+ A I+ +SVD+T RAHQH Sbjct 66 QTVWKRHARYARDGTWDRILHVILA----DADAAGKIDWNVSVDATICRAHQHGTNTTRP 121 Query 121 TLATGGTVGLQE 132 TGG V QE Sbjct 122 EQDTGGRVESQE 133 >gi|145296939|ref|YP_001139760.1| hypothetical protein cgR_2839 [Corynebacterium glutamicum R] gi|140846859|dbj|BAF55858.1| hypothetical protein [Corynebacterium glutamicum R] Length=144 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 58/126 (47%), Positives = 83/126 (66%), Gaps = 8/126 (6%) Query 7 ISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWKR 66 IS+E WAV+EPLMP+ G+ R ++DHRL +EG+AW++RTG+PWRD+P FG W +++KR Sbjct 21 ISNEVWAVMEPLMPTVTGR-SRPWTDHRLAVEGMAWKYRTGAPWRDVPERFGKWNSIYKR 79 Query 67 HHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTLATGG 126 +RW+ DGT + + V A+ A I+ ++S+DST R HQH A D TGG Sbjct 80 FNRWAEDGTWENLLTEVQE----QADAAGKIDWVVSIDSTIARVHQHGASLARD---TGG 132 Query 127 TVGLQE 132 + QE Sbjct 133 SAESQE 138 >gi|108805310|ref|YP_645247.1| putative transposase [Rubrobacter xylanophilus DSM 9941] gi|108766553|gb|ABG05435.1| putative transposase [Rubrobacter xylanophilus DSM 9941] Length=125 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 54/120 (45%), Positives = 78/120 (65%), Gaps = 5/120 (4%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 + + G I+D W +EPL+P + G+ G ++ DHR ++ GI W+ RTGSPWRDLP +GPW Sbjct 1 MVQRGEITDRAWQEIEPLLPEY-GQSGGQWRDHRTVVNGILWKLRTGSPWRDLPERYGPW 59 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 QT + R +RW DGT D + AH ++ ++E +SVD T +RAHQH+AGA S+ Sbjct 60 QTCFDRFNRWRRDGTWDRLLAHAQ----TKSDAVGEVEWEVSVDETLIRAHQHAAGARSE 115 >gi|344043336|gb|EGV39033.1| hypothetical protein CgS9114_15093 [Corynebacterium glutamicum S9114] Length=120 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 55/122 (46%), Positives = 79/122 (65%), Gaps = 8/122 (6%) Query 11 FWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWKRHHRW 70 WAV+EPLMP+ G+ R ++DHRL +EG+AW++RTG+PWRD+P FG W +++KR +RW Sbjct 1 MWAVMEPLMPTVTGR-SRPWTDHRLAVEGMAWKYRTGAPWRDVPERFGKWNSIYKRFNRW 59 Query 71 SLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTLATGGTVGL 130 + DGT + + V A+ A I+ ++S+DST R HQH A D TGG+ Sbjct 60 AEDGTWENLLTEVQE----QADAAGKIDWVVSIDSTIARVHQHGASLARD---TGGSAES 112 Query 131 QE 132 QE Sbjct 113 QE 114 >gi|50954104|ref|YP_061392.1| transposase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950586|gb|AAT88287.1| transposase [Leifsonia xyli subsp. xyli str. CTCB07] Length=131 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 60/131 (46%), Positives = 80/131 (62%), Gaps = 7/131 (5%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 ++R ++SD W ++E ++ G+PGR+FS RL++EGI +R+RTG WRDLP FG W Sbjct 1 MSRFQMLSDSQWVLIEGMLQRPTGRPGRKFSVARLMVEGIVYRYRTGIAWRDLPEVFGLW 60 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 QTVW H R + DG D V A V AV A+ A ++ LSVDST R HQH A + Sbjct 61 QTVWTWHRRMAFDGMWDRVLAKVTAV----ADTAGMVDWSLSVDSTIARVHQH---ATNM 113 Query 121 TLATGGTVGLQ 131 TGG + LQ Sbjct 114 KRLTGGWIELQ 124 >gi|257067256|ref|YP_003153511.1| transposase [Brachybacterium faecium DSM 4810] gi|257067717|ref|YP_003153972.1| transposase [Brachybacterium faecium DSM 4810] gi|256558074|gb|ACU83921.1| transposase [Brachybacterium faecium DSM 4810] gi|256558535|gb|ACU84382.1| transposase [Brachybacterium faecium DSM 4810] Length=303 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/128 (47%), Positives = 79/128 (62%), Gaps = 5/128 (3%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAE-FGP 59 + R V++D+ W +EP++PS+ G+ GR F D+R I+EGI +R RTG PWRDLP E FGP Sbjct 6 IPRHQVLTDKQWERIEPMLPSNTGRKGRPFHDNRKIVEGIIYRARTGIPWRDLPREQFGP 65 Query 60 WQTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACS 119 WQTVWKRH+ ++ G D + A + A DIE ++SVDST RAHQH Sbjct 66 WQTVWKRHYLYARLGVWDRIHAALMAQADAAG----DIEWMVSVDSTINRAHQHGTNTTR 121 Query 120 DTLATGGT 127 TG T Sbjct 122 PDQPTGAT 129 >gi|120401312|ref|YP_951141.1| transposase [Mycobacterium vanbaalenii PYR-1] gi|120401519|ref|YP_951348.1| transposase [Mycobacterium vanbaalenii PYR-1] gi|119954130|gb|ABM11135.1| transposase [Mycobacterium vanbaalenii PYR-1] gi|119954337|gb|ABM11342.1| transposase [Mycobacterium vanbaalenii PYR-1] Length=131 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/132 (46%), Positives = 81/132 (62%), Gaps = 7/132 (5%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 ++R +++D W+++E L+P+ GK GR F D R +LEGI +R+R G WRD+P FGPW Sbjct 1 MSRFQLLTDAQWSLIEELLPARTGKKGRPFRDARQMLEGIIYRYRCGIAWRDVPEVFGPW 60 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 QT+W H R S +GT D V A + A A+ A I+ +SVDST RAHQH+ D Sbjct 61 QTIWTWHRRMSAEGTWDLVLARLLAT----ADQAGIIDWSVSVDSTIARAHQHATNITRD 116 Query 121 TLATGGTVGLQE 132 TGG V L E Sbjct 117 ---TGGWVELHE 125 >gi|315501927|ref|YP_004080814.1| transposase [Micromonospora sp. L5] gi|315408546|gb|ADU06663.1| transposase [Micromonospora sp. L5] Length=288 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/118 (49%), Positives = 77/118 (66%), Gaps = 12/118 (10%) Query 3 RVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQT 62 R G ++DE WAV+ PL+P G GR + DHR ++ GI W+ RTG+PWRDLP FGPW+T Sbjct 2 RRGELTDEAWAVIAPLLPEPGGARGR-WRDHRQVINGILWKLRTGAPWRDLPERFGPWKT 60 Query 63 VWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAED---IEKLLSVDSTNVRAHQHSAGA 117 +R RWS DGT D + A A+V +D ++ +S+DS+ VRAHQH+AGA Sbjct 61 CHERLRRWSADGTWDRILAA--------AQVHDDGTPVQWTISIDSSIVRAHQHAAGA 110 >gi|29831009|ref|NP_825643.1| IS1648-like transposase [Streptomyces avermitilis MA-4680] gi|29608123|dbj|BAC72178.1| putative IS5 family ISMt1-like transposase [Streptomyces avermitilis MA-4680] Length=262 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 59/124 (48%), Positives = 77/124 (63%), Gaps = 5/124 (4%) Query 3 RVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAE-FGPWQ 61 R+ +++DE WA + P +P + GK G F+DHR I+EGI +R+RT PWRDLP E FGPWQ Sbjct 6 RMRLLTDEQWARLVPCLPHNTGKAGCPFADHRRIVEGIIYRYRTAIPWRDLPREAFGPWQ 65 Query 62 TVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDT 121 TV KR RW+ DGT D V A + A A+ ++ +SVDST RAHQH+ Sbjct 66 TVSKRPRRWAADGTWDTVLAQLTA----QADSIHRVDWTVSVDSTINRAHQHATNTVRPE 121 Query 122 LATG 125 TG Sbjct 122 KDTG 125 >gi|257069701|ref|YP_003155956.1| transposase [Brachybacterium faecium DSM 4810] gi|256560519|gb|ACU86366.1| transposase [Brachybacterium faecium DSM 4810] Length=303 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 59/129 (46%), Positives = 78/129 (61%), Gaps = 5/129 (3%) Query 6 VISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAE-FGPWQTVW 64 V++D+ W +EP++PS+ G+ GR F D+R I+EGI +R RTG PWRDLP E FGPWQTVW Sbjct 11 VLTDKQWERIEPMLPSNTGRKGRPFHDNRKIVEGIIYRARTGIPWRDLPREQFGPWQTVW 70 Query 65 KRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSDTLAT 124 KRH+ ++ G D + A + A DIE ++SVDST RAHQH T Sbjct 71 KRHYLYARLGVWDRIHAALMAQADAAG----DIEWMVSVDSTINRAHQHGTNTTRPDQPT 126 Query 125 GGTVGLQEI 133 G T + Sbjct 127 GATANHNNL 135 >gi|336117268|ref|YP_004572035.1| putative transposase [Microlunatus phosphovorus NM-1] gi|334685047|dbj|BAK34632.1| putative transposase [Microlunatus phosphovorus NM-1] Length=159 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/151 (45%), Positives = 89/151 (59%), Gaps = 27/151 (17%) Query 7 ISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWKR 66 ++D WA +EPL+PS + GR ++DHR +++G+ WR RTGSPWRDLP+ +GPW+TV+ R Sbjct 7 LTDAQWAALEPLLPSGGARRGRPWADHRRVVDGVLWRTRTGSPWRDLPSSYGPWKTVYNR 66 Query 67 HHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGA--------C 118 H RWS DGT + V A + G D V E + VDST VRAHQ +AGA Sbjct 67 HRRWSGDGTWEAVLAELQ--RGCD--VGESPWS-VGVDSTVVRAHQDAAGAPHLPPADVA 121 Query 119 SDTLA--------------TGGTVGLQEIRR 135 ++ LA TGG + LQEI R Sbjct 122 AERLAVALDDHVTRAAARPTGGRIELQEIGR 152 >gi|308377594|ref|ZP_07479761.2| hypothetical protein TMIG_03610 [Mycobacterium tuberculosis SUMu009] gi|308355215|gb|EFP44066.1| hypothetical protein TMIG_03610 [Mycobacterium tuberculosis SUMu009] Length=92 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 51/52 (99%), Positives = 51/52 (99%), Gaps = 0/52 (0%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRD 52 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRL LEGIAWRFRTGSPWRD Sbjct 41 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLXLEGIAWRFRTGSPWRD 92 >gi|108805303|ref|YP_645240.1| transposase [Rubrobacter xylanophilus DSM 9941] gi|108766546|gb|ABG05428.1| Transposase and inactivated derivatives-like protein [Rubrobacter xylanophilus DSM 9941] Length=125 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 53/120 (45%), Positives = 77/120 (65%), Gaps = 5/120 (4%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 + + G I+D W +EPL+P + G+ G ++ DHR ++ GI W+ RTGSPWRDL +GPW Sbjct 1 MVQRGEITDRAWQEIEPLLPEY-GQSGGQWRDHRTVVNGILWKLRTGSPWRDLLERYGPW 59 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 QT + R +RW DGT D + AH ++ ++E +SVD T +RAHQH+AGA S+ Sbjct 60 QTCFDRFNRWRRDGTWDRLLAHAQ----TKSDAVGEVEWEVSVDETLIRAHQHAAGARSE 115 >gi|345008073|ref|YP_004810427.1| transposase IS4 family protein [Streptomyces violaceusniger Tu 4113] gi|344034422|gb|AEM80147.1| transposase IS4 family protein [Streptomyces violaceusniger Tu 4113] Length=297 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 55/111 (50%), Positives = 72/111 (65%), Gaps = 10/111 (9%) Query 7 ISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVWKR 66 ++D W + PL+PS G+ GR ++DHR I+E I +R+RTG PWRDLPA FG W+TVW R Sbjct 7 LTDRQWDRIRPLLPSSTGRRGRPWADHRRIVEAIVYRYRTGIPWRDLPARFGSWKTVWAR 66 Query 67 HHRWSLDGTCDEVFAHVAAVFGVDAEVAED---IEKLLSVDSTNVRAHQHS 114 H RW+ DGT D V GV A+D I+ ++VDST RAHQH+ Sbjct 67 HRRWAADGTWDR-------VLGVLLARADDDGLIDWRVAVDSTITRAHQHA 110 >gi|344999700|ref|YP_004802554.1| putative IS1648 transposase [Streptomyces sp. SirexAA-E] gi|344315326|gb|AEN10014.1| putative IS1648 transposase [Streptomyces sp. SirexAA-E] Length=141 Score = 107 bits (267), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 58/114 (51%), Positives = 80/114 (71%), Gaps = 6/114 (5%) Query 5 GVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVW 64 G +++ WA +EP +P+ G+ G R+++HR ++ GI +R RTG PWRDLP FG W+TV+ Sbjct 4 GDLTNAEWARLEPHLPTF-GQRGGRWNNHRKVINGILFRVRTGIPWRDLPERFGRWKTVY 62 Query 65 KRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIE-KLLSVDSTNVRAHQHSAGA 117 +RH RWS DGT D V V A DA++A I+ L+SVDST+ RAHQH+AGA Sbjct 63 ERHRRWSADGTWDRVLRSVQA----DADLAGRIDWSLVSVDSTSCRAHQHAAGA 112 >gi|296164148|ref|ZP_06846760.1| transposase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900499|gb|EFG79893.1| transposase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=131 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 61/132 (47%), Positives = 81/132 (62%), Gaps = 7/132 (5%) Query 1 VTRVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPW 60 ++R ++SD W+++E L+P GK GR F D R ++EGI +R+R G WRD+P FGPW Sbjct 1 MSRFRLLSDAQWSLIEDLLPVRTGKKGRPFRDARQMVEGIIYRYRCGIAWRDVPEVFGPW 60 Query 61 QTVWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGACSD 120 QT+W H R S DGT D V A + A+ A I+ ++VDST RAHQH A + Sbjct 61 QTIWTWHRRLSEDGTWDVVLARLLTA----AQEAGIIDWAVAVDSTIARAHQH---ATNV 113 Query 121 TLATGGTVGLQE 132 T TGG V LQE Sbjct 114 TRHTGGWVELQE 125 >gi|291444284|ref|ZP_06583674.1| transposase [Streptomyces roseosporus NRRL 15998] gi|291347231|gb|EFE74135.1| transposase [Streptomyces roseosporus NRRL 15998] Length=133 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 54/113 (48%), Positives = 72/113 (64%), Gaps = 5/113 (4%) Query 5 GVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVW 64 G ++D W +EPL+P +G+ GR + DHR ++ G+ WR RTG+PWRDLP FGPWQTV+ Sbjct 21 GELTDAAWRRIEPLLPQVDGR-GRPWRDHRQVVNGVLWRLRTGAPWRDLPDRFGPWQTVY 79 Query 65 KRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSAGA 117 +R RW DGT + HV V + +E +SVDST RAHQH+ GA Sbjct 80 ERFARWEADGTWARLLEHVQ----VRDDALGRVEWTVSVDSTINRAHQHAVGA 128 >gi|21233965|ref|NP_639744.1| putative is1648 transposase [Streptomyces coelicolor A3(2)] gi|17026159|emb|CAD11995.1| putative IS1648 transposase [Streptomyces coelicolor A3(2)] Length=141 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 53/114 (47%), Positives = 79/114 (70%), Gaps = 6/114 (5%) Query 5 GVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVW 64 G +++ W+++EP +P G+ GR ++DHR ++ GI +R RTG PWRDLP +G W+T++ Sbjct 4 GDLTNREWSLLEPHLPPLGGRGGR-WNDHRTVVNGILFRVRTGVPWRDLPERYGSWKTIY 62 Query 65 KRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIE-KLLSVDSTNVRAHQHSAGA 117 +RH RWS DGT D + V A DA++A I+ ++ VDST+ RAHQH+AGA Sbjct 63 ERHRRWSADGTWDRILQSVQA----DADLAGRIDWSMVGVDSTSCRAHQHAAGA 112 >gi|182433880|ref|YP_001821599.1| putative transposase [Streptomyces griseus subsp. griseus NBRC 13350] gi|182434049|ref|YP_001821768.1| putative transposase [Streptomyces griseus subsp. griseus NBRC 13350] gi|182440843|ref|YP_001828562.1| putative transposase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178462396|dbj|BAG16916.1| putative transposase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178462565|dbj|BAG17085.1| putative transposase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178469359|dbj|BAG23879.1| putative transposase [Streptomyces griseus subsp. griseus NBRC 13350] Length=121 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/113 (51%), Positives = 74/113 (66%), Gaps = 9/113 (7%) Query 3 RVGVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQT 62 R G ISD WAV+ PL+P G+ R+ DHR +LEGI ++FRTG PWRDLP FGPWQT Sbjct 2 RDGEISDAAWAVMVPLLPP-AGRARGRWRDHRQVLEGIVFKFRTGLPWRDLPDRFGPWQT 60 Query 63 VWKRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIEKLLSVDSTNVRAHQHSA 115 V R RW+ DGT D + A A+ +++ L+++DST VRAHQH+A Sbjct 61 VHGRFARWAADGTFDRLLAA--------AQGRAEVDWLVAIDSTTVRAHQHTA 105 >gi|167006331|ref|YP_001661554.1| transposase [Streptomyces sp. HK1] gi|166162413|gb|ABY83534.1| probable transposase [Streptomyces sp. HK1] Length=141 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 53/114 (47%), Positives = 79/114 (70%), Gaps = 6/114 (5%) Query 5 GVISDEFWAVVEPLMPSHEGKPGRRFSDHRLILEGIAWRFRTGSPWRDLPAEFGPWQTVW 64 G +++ W+++EP +P G+ G R++DHR ++ G+ +R RTG PWRDLP +G W+TV+ Sbjct 4 GDLTNREWSLLEPHLPP-SGRRGGRWNDHRTVVNGVLFRVRTGVPWRDLPERYGSWKTVY 62 Query 65 KRHHRWSLDGTCDEVFAHVAAVFGVDAEVAEDIE-KLLSVDSTNVRAHQHSAGA 117 +RH RWS DGT D + V A DA++A I+ ++ VDST+ RAHQH+AGA Sbjct 63 ERHRRWSADGTWDRILHSVQA----DADLAGRIDWSMVGVDSTSCRAHQHAAGA 112 Lambda K H 0.321 0.136 0.447 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 129391415580 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40