BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1166 Length=635 Score E Sequences producing significant alignments: (Bits) Value gi|15608306|ref|NP_215682.1| lipoprotein LpqW [Mycobacterium tub... 1256 0.0 gi|308377651|ref|ZP_07479908.2| lipoprotein lpqW [Mycobacterium ... 1255 0.0 gi|308376648|ref|ZP_07439527.2| lipoprotein lpqW [Mycobacterium ... 1255 0.0 gi|289442600|ref|ZP_06432344.1| lipoprotein lpqW [Mycobacterium ... 1254 0.0 gi|308231763|ref|ZP_07413673.2| lipoprotein lpqW [Mycobacterium ... 1145 0.0 gi|183984258|ref|YP_001852549.1| lipoprotein LpqW [Mycobacterium... 1021 0.0 gi|41408713|ref|NP_961549.1| LpqW [Mycobacterium avium subsp. pa... 1021 0.0 gi|336458650|gb|EGO37612.1| ABC-type dipeptide transport system,... 1017 0.0 gi|118616761|ref|YP_905093.1| lipoprotein LpqW [Mycobacterium ul... 1009 0.0 gi|296170057|ref|ZP_06851660.1| ABC superfamily ATP binding cass... 1007 0.0 gi|254774185|ref|ZP_05215701.1| LpqW [Mycobacterium avium subsp.... 1007 0.0 gi|118467073|ref|YP_880553.1| extracellular solute-binding prote... 1006 0.0 gi|254818777|ref|ZP_05223778.1| LpqW [Mycobacterium intracellula... 996 0.0 gi|15827788|ref|NP_302051.1| hypothetical protein ML1497 [Mycoba... 995 0.0 gi|240171698|ref|ZP_04750357.1| lipoprotein LpqW [Mycobacterium ... 992 0.0 gi|342862058|ref|ZP_08718701.1| LpqW [Mycobacterium colombiense ... 986 0.0 gi|315443219|ref|YP_004076098.1| peptide ABC transporter, peripl... 875 0.0 gi|118471180|ref|YP_889376.1| extracellular solute-binding prote... 869 0.0 gi|108801003|ref|YP_641200.1| extracellular solute-binding prote... 858 0.0 gi|333989797|ref|YP_004522411.1| hypothetical protein JDM601_115... 858 0.0 gi|145222752|ref|YP_001133430.1| extracellular solute-binding pr... 855 0.0 gi|112490880|pdb|2GRV|A Chain A, Crystal Structure Of Lpqw >gi|1... 839 0.0 gi|120405491|ref|YP_955320.1| extracellular solute-binding prote... 801 0.0 gi|169628408|ref|YP_001702057.1| putative lipoprotein LpqW [Myco... 714 0.0 gi|325676457|ref|ZP_08156135.1| ABC superfamily ATP binding cass... 573 3e-161 gi|312138841|ref|YP_004006177.1| high affinity substrate-binding... 573 4e-161 gi|229493892|ref|ZP_04387664.1| bacterial extracellular solute-b... 562 6e-158 gi|226307678|ref|YP_002767638.1| hypothetical protein RER_41910 ... 559 7e-157 gi|226365404|ref|YP_002783187.1| hypothetical protein ROP_59950 ... 556 4e-156 gi|111022897|ref|YP_705869.1| hypothetical protein RHA1_ro05934 ... 548 1e-153 gi|54026732|ref|YP_120974.1| hypothetical protein nfa47580 [Noca... 531 1e-148 gi|333921033|ref|YP_004494614.1| family 5 extracellular solute-b... 463 3e-128 gi|262203219|ref|YP_003274427.1| extracellular solute-binding pr... 404 3e-110 gi|317506361|ref|ZP_07964172.1| extracellular solute-binding pro... 396 5e-108 gi|296393258|ref|YP_003658142.1| family 5 extracellular solute-b... 395 2e-107 gi|326381442|ref|ZP_08203136.1| extracellular solute-binding pro... 377 5e-102 gi|296138872|ref|YP_003646115.1| family 5 extracellular solute-b... 363 7e-98 gi|343926944|ref|ZP_08766437.1| hypothetical protein GOALK_072_0... 359 7e-97 gi|134097602|ref|YP_001103263.1| extracellular solute-binding pr... 323 4e-86 gi|256374908|ref|YP_003098568.1| family 5 extracellular solute-b... 317 3e-84 gi|257057085|ref|YP_003134917.1| ABC-type dipeptide transport sy... 304 4e-80 gi|300789844|ref|YP_003770135.1| oligopeptide/dipeptide ABC tran... 286 8e-75 gi|331694865|ref|YP_004331104.1| ABC transporter periplasmic sub... 267 4e-69 gi|302530057|ref|ZP_07282399.1| predicted protein [Streptomyces ... 263 7e-68 gi|237785226|ref|YP_002905931.1| hypothetical protein ckrop_0625... 231 2e-58 gi|319950844|ref|ZP_08024728.1| high affinity substrate binding ... 221 2e-55 gi|325002610|ref|ZP_08123722.1| extracellular solute-binding pro... 216 1e-53 gi|258654436|ref|YP_003203592.1| family 1 extracellular solute-b... 202 1e-49 gi|340794837|ref|YP_004760300.1| hypothetical protein CVAR_1876 ... 202 2e-49 gi|334565094|ref|ZP_08518085.1| putative secreted protein [Coryn... 199 1e-48 >gi|15608306|ref|NP_215682.1| lipoprotein LpqW [Mycobacterium tuberculosis H37Rv] gi|15840609|ref|NP_335646.1| putative lipoprotein [Mycobacterium tuberculosis CDC1551] gi|31792360|ref|NP_854853.1| putative lipoprotein LPQW [Mycobacterium bovis AF2122/97] 54 more sequence titles Length=635 Score = 1256 bits (3250), Expect = 0.0, Method: Compositional matrix adjust. Identities = 635/635 (100%), Positives = 635/635 (100%), Gaps = 0/635 (0%) Query 1 MGVPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGID 60 MGVPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGID Sbjct 1 MGVPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGID 60 Query 61 WIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNH 120 WIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNH Sbjct 61 WIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNH 120 Query 121 PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAV 180 PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAV Sbjct 121 PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAV 180 Query 181 VTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIA 240 VTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIA Sbjct 181 VTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIA 240 Query 241 RNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 300 RNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR Sbjct 241 RNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 300 Query 301 IVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDP 360 IVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDP Sbjct 301 IVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDP 360 Query 361 GYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISK 420 GYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISK Sbjct 361 GYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISK 420 Query 421 DGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIV 480 DGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIV Sbjct 421 DGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIV 480 Query 481 GWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPR 540 GWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPR Sbjct 481 GWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPR 540 Query 541 RPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQD 600 RPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQD Sbjct 541 RPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQD 600 Query 601 TTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTGQ 635 TTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTGQ Sbjct 601 TTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTGQ 635 >gi|308377651|ref|ZP_07479908.2| lipoprotein lpqW [Mycobacterium tuberculosis SUMu009] gi|308355071|gb|EFP43922.1| lipoprotein lpqW [Mycobacterium tuberculosis SUMu009] Length=666 Score = 1255 bits (3248), Expect = 0.0, Method: Compositional matrix adjust. Identities = 635/635 (100%), Positives = 635/635 (100%), Gaps = 0/635 (0%) Query 1 MGVPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGID 60 MGVPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGID Sbjct 32 MGVPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGID 91 Query 61 WIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNH 120 WIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNH Sbjct 92 WIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNH 151 Query 121 PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAV 180 PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAV Sbjct 152 PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAV 211 Query 181 VTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIA 240 VTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIA Sbjct 212 VTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIA 271 Query 241 RNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 300 RNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR Sbjct 272 RNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 331 Query 301 IVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDP 360 IVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDP Sbjct 332 IVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDP 391 Query 361 GYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISK 420 GYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISK Sbjct 392 GYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISK 451 Query 421 DGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIV 480 DGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIV Sbjct 452 DGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIV 511 Query 481 GWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPR 540 GWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPR Sbjct 512 GWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPR 571 Query 541 RPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQD 600 RPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQD Sbjct 572 RPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQD 631 Query 601 TTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTGQ 635 TTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTGQ Sbjct 632 TTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTGQ 666 >gi|308376648|ref|ZP_07439527.2| lipoprotein lpqW [Mycobacterium tuberculosis SUMu008] gi|308398807|ref|ZP_07492832.2| lipoprotein lpqW [Mycobacterium tuberculosis SUMu012] gi|308350424|gb|EFP39275.1| lipoprotein lpqW [Mycobacterium tuberculosis SUMu008] gi|308366604|gb|EFP55455.1| lipoprotein lpqW [Mycobacterium tuberculosis SUMu012] gi|323720329|gb|EGB29425.1| lipoprotein lpqW [Mycobacterium tuberculosis CDC1551A] Length=642 Score = 1255 bits (3248), Expect = 0.0, Method: Compositional matrix adjust. Identities = 635/635 (100%), Positives = 635/635 (100%), Gaps = 0/635 (0%) Query 1 MGVPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGID 60 MGVPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGID Sbjct 8 MGVPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGID 67 Query 61 WIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNH 120 WIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNH Sbjct 68 WIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNH 127 Query 121 PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAV 180 PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAV Sbjct 128 PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAV 187 Query 181 VTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIA 240 VTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIA Sbjct 188 VTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIA 247 Query 241 RNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 300 RNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR Sbjct 248 RNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 307 Query 301 IVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDP 360 IVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDP Sbjct 308 IVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDP 367 Query 361 GYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISK 420 GYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISK Sbjct 368 GYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISK 427 Query 421 DGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIV 480 DGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIV Sbjct 428 DGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIV 487 Query 481 GWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPR 540 GWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPR Sbjct 488 GWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPR 547 Query 541 RPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQD 600 RPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQD Sbjct 548 RPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQD 607 Query 601 TTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTGQ 635 TTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTGQ Sbjct 608 TTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTGQ 642 >gi|289442600|ref|ZP_06432344.1| lipoprotein lpqW [Mycobacterium tuberculosis T46] gi|289569170|ref|ZP_06449397.1| lipoprotein lpqW [Mycobacterium tuberculosis T17] gi|289415519|gb|EFD12759.1| lipoprotein lpqW [Mycobacterium tuberculosis T46] gi|289542924|gb|EFD46572.1| lipoprotein lpqW [Mycobacterium tuberculosis T17] Length=635 Score = 1254 bits (3244), Expect = 0.0, Method: Compositional matrix adjust. Identities = 634/635 (99%), Positives = 634/635 (99%), Gaps = 0/635 (0%) Query 1 MGVPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGID 60 MGVPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGID Sbjct 1 MGVPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGID 60 Query 61 WIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNH 120 WIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNH Sbjct 61 WIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNH 120 Query 121 PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAV 180 PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAV Sbjct 121 PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAV 180 Query 181 VTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIA 240 VTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIA Sbjct 181 VTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIA 240 Query 241 RNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 300 RNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR Sbjct 241 RNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 300 Query 301 IVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDP 360 IVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDP Sbjct 301 IVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDP 360 Query 361 GYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISK 420 GYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIR RISK Sbjct 361 GYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRSRISK 420 Query 421 DGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIV 480 DGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIV Sbjct 421 DGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIV 480 Query 481 GWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPR 540 GWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPR Sbjct 481 GWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPR 540 Query 541 RPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQD 600 RPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQD Sbjct 541 RPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQD 600 Query 601 TTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTGQ 635 TTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTGQ Sbjct 601 TTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTGQ 635 >gi|308231763|ref|ZP_07413673.2| lipoprotein lpqW [Mycobacterium tuberculosis SUMu001] gi|308370039|ref|ZP_07420093.2| lipoprotein lpqW [Mycobacterium tuberculosis SUMu002] gi|308370643|ref|ZP_07422207.2| lipoprotein lpqW [Mycobacterium tuberculosis SUMu003] 9 more sequence titles Length=579 Score = 1145 bits (2963), Expect = 0.0, Method: Compositional matrix adjust. Identities = 579/579 (100%), Positives = 579/579 (100%), Gaps = 0/579 (0%) Query 57 MGIDWIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADV 116 MGIDWIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADV Sbjct 1 MGIDWIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADV 60 Query 117 TNNHPFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGG 176 TNNHPFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGG Sbjct 61 TNNHPFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGG 120 Query 177 KQAVVTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDE 236 KQAVVTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDE Sbjct 121 KQAVVTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDE 180 Query 237 ILIARNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDV 296 ILIARNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDV Sbjct 181 ILIARNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDV 240 Query 297 RTARIVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRS 356 RTARIVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRS Sbjct 241 RTARIVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRS 300 Query 357 PSDPGYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRG 416 PSDPGYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRG Sbjct 301 PSDPGYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRG 360 Query 417 RISKDGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRV 476 RISKDGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRV Sbjct 361 RISKDGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRV 420 Query 477 DAIVGWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPP 536 DAIVGWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPP Sbjct 421 DAIVGWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPP 480 Query 537 TAPRRPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLP 596 TAPRRPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLP Sbjct 481 TAPRRPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLP 540 Query 597 ILQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTGQ 635 ILQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTGQ Sbjct 541 ILQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTGQ 579 >gi|183984258|ref|YP_001852549.1| lipoprotein LpqW [Mycobacterium marinum M] gi|183177584|gb|ACC42694.1| conserved lipoprotein LpqW [Mycobacterium marinum M] Length=635 Score = 1021 bits (2640), Expect = 0.0, Method: Compositional matrix adjust. Identities = 537/634 (85%), Positives = 572/634 (91%), Gaps = 0/634 (0%) Query 1 MGVPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGID 60 MGV SPVRRVC+TVG L+ + L+GCTVSPPPAPQSTDT +TPPPP PTQIIMGID Sbjct 1 MGVFSPVRRVCLTVGVLITALGVALSGCTVSPPPAPQSTDTTHNTPPPPPHPTQIIMGID 60 Query 61 WIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNH 120 IG GFNPHLLSDLSPVNAAISALVLPSAFRP+PDPN+PTGSRW+MDPTLLVSA+VT Sbjct 61 SIGAGFNPHLLSDLSPVNAAISALVLPSAFRPVPDPNSPTGSRWDMDPTLLVSAEVTGQS 120 Query 121 PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAV 180 PFTVTYKIRPEAQWTDNAPIAADDFWYLW+QMV+QPGVVDPAGY LIT+VQSLEGGKQAV Sbjct 121 PFTVTYKIRPEAQWTDNAPIAADDFWYLWRQMVSQPGVVDPAGYDLITAVQSLEGGKQAV 180 Query 181 VTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIA 240 VTFAQPYPAWRELF ++LPAHIVKD+PGGFA+GLAR LPVTGGQFRVENIDPQRDEILIA Sbjct 181 VTFAQPYPAWRELFDNLLPAHIVKDVPGGFAAGLARTLPVTGGQFRVENIDPQRDEILIA 240 Query 241 RNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 300 RNDRYWGPP+KP +ILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR Sbjct 241 RNDRYWGPPAKPSLILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 300 Query 301 IVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDP 360 IVTPRVMQ TLRAN PKLA+ QVRKAILGLLDVDLLAAVGAG+DNTVTLDQAQ+RSPSDP Sbjct 301 IVTPRVMQLTLRANQPKLAEAQVRKAILGLLDVDLLAAVGAGSDNTVTLDQAQVRSPSDP 360 Query 361 GYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISK 420 GYVPTAPPA+S++AAL LLE +G+Q+++NTSVSPAP P STTT VSTGPPEVIRG ISK Sbjct 361 GYVPTAPPALSTSAALALLEGAGYQIESNTSVSPAPPGPGSTTTPVSTGPPEVIRGGISK 420 Query 421 DGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIV 480 DG QLTLVIGVAANDPTSVAVANTAADQLR+VGIAA+VLALDPVTLY DALNDNRVDAIV Sbjct 421 DGRQLTLVIGVAANDPTSVAVANTAADQLRNVGIAASVLALDPVTLYGDALNDNRVDAIV 480 Query 481 GWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPR 540 GW QAGGNLATLLASRYGCPALQ T V P P+A G PSA P TP P AP Sbjct 481 GWHQAGGNLATLLASRYGCPALQTTEVWEPTIPANTPAATTGSMPSAVPSAVTPVPPAPS 540 Query 541 RPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQD 600 P P AL +APSNLTGICD SIQSNIDAALNGTKNINDVITAVEPRLWNM TVLPILQD Sbjct 541 EPPGPNALFRAPSNLTGICDPSIQSNIDAALNGTKNINDVITAVEPRLWNMWTVLPILQD 600 Query 601 TTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTG 634 TTIVA GPSV+NVSLSG+VPVGIVGDAGQWVKTG Sbjct 601 TTIVAVGPSVRNVSLSGSVPVGIVGDAGQWVKTG 634 >gi|41408713|ref|NP_961549.1| LpqW [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397071|gb|AAS04932.1| LpqW [Mycobacterium avium subsp. paratuberculosis K-10] Length=647 Score = 1021 bits (2640), Expect = 0.0, Method: Compositional matrix adjust. Identities = 528/637 (83%), Positives = 573/637 (90%), Gaps = 7/637 (1%) Query 1 MGVPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGID 60 + VP VRRV + +G LV++ +VL+ CTV+PPPAPQSTDTP ++ PPP R +QIIMGID Sbjct 14 ISVPRRVRRVFMVLGGLVSVVGLVLSACTVNPPPAPQSTDTPHNSVPPPPRVSQIIMGID 73 Query 61 WIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNH 120 IG GFNPHLLSDLSPVNAAISALVLPSAFRP+PDPNTPTGSRWEMDPTLLVSA+VT+ + Sbjct 74 SIGAGFNPHLLSDLSPVNAAISALVLPSAFRPVPDPNTPTGSRWEMDPTLLVSAEVTSQN 133 Query 121 PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAV 180 PFTVTYKIRPEAQWTDNAPIAADDFWYLW QMV+QPGVVDPAGY LIT VQSLEGGKQAV Sbjct 134 PFTVTYKIRPEAQWTDNAPIAADDFWYLWHQMVSQPGVVDPAGYDLITGVQSLEGGKQAV 193 Query 181 VTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIA 240 VTF++PYPAW+ELF +ILPAHIVKD+PGGFA+GLARALPVTGGQFRVE+IDPQRDEILIA Sbjct 194 VTFSEPYPAWKELFNNILPAHIVKDVPGGFAAGLARALPVTGGQFRVESIDPQRDEILIA 253 Query 241 RNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 300 RNDRYWGPP+KPG+ILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR Sbjct 254 RNDRYWGPPAKPGLILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 313 Query 301 IVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDP 360 IVTPRVMQ TLRA PKLADTQVRKAILGLLDVDLLAAVGAG+DNTVTLDQAQIR+PSDP Sbjct 314 IVTPRVMQLTLRATQPKLADTQVRKAILGLLDVDLLAAVGAGSDNTVTLDQAQIRAPSDP 373 Query 361 GYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISK 420 GY PTAPPAM++ AAL LLE +G++V+ NTS SPA P +TGPPEVIRGRISK Sbjct 374 GYEPTAPPAMTTPAALALLEGAGYKVEPNTSASPATPAPGPP----NTGPPEVIRGRISK 429 Query 421 DGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIV 480 DG+QL+L IGVAANDPT+VAVANTAADQLR+VGIAATVLALDPVTLY DALNDNRVDAIV Sbjct 430 DGQQLSLAIGVAANDPTAVAVANTAADQLRNVGIAATVLALDPVTLYRDALNDNRVDAIV 489 Query 481 GWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTA-- 538 GW QAGGNLAT LA+RYGCPALQ+T VPA+ PT AP GP PS P T + PT+ Sbjct 490 GWHQAGGNLATRLAARYGCPALQSTQVPASTEPTPTSPAPGGPAPSTGPATRSATPTSTA 549 Query 539 -PRRPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPI 597 P RP+DP ALV+APSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPI Sbjct 550 PPSRPADPNALVQAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPI 609 Query 598 LQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTG 634 LQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQW KTG Sbjct 610 LQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWTKTG 646 >gi|336458650|gb|EGO37612.1| ABC-type dipeptide transport system, periplasmic component [Mycobacterium avium subsp. paratuberculosis S397] Length=641 Score = 1017 bits (2630), Expect = 0.0, Method: Compositional matrix adjust. Identities = 527/637 (83%), Positives = 572/637 (90%), Gaps = 7/637 (1%) Query 1 MGVPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGID 60 + VP VRRV + +G LV++ +VL+ CTV+PPPAPQSTDTP ++ PPP R +QIIMGID Sbjct 8 ISVPRRVRRVFMVLGGLVSVVGLVLSACTVNPPPAPQSTDTPHNSVPPPPRVSQIIMGID 67 Query 61 WIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNH 120 IG GFNPHLLSDLSPVNAAISALVLPSAFRP+PDPNTPTGSRWEMDPTLLVSA+VT+ + Sbjct 68 SIGAGFNPHLLSDLSPVNAAISALVLPSAFRPVPDPNTPTGSRWEMDPTLLVSAEVTSQN 127 Query 121 PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAV 180 PFTVTYKIRPEAQWTDNAPIAADDFWYLW QMV+QPGVVDPAGY LIT VQ LEGGKQAV Sbjct 128 PFTVTYKIRPEAQWTDNAPIAADDFWYLWHQMVSQPGVVDPAGYDLITGVQPLEGGKQAV 187 Query 181 VTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIA 240 VTF++PYPAW+ELF +ILPAHIVKD+PGGFA+GLARALPVTGGQFRVE+IDPQRDEILIA Sbjct 188 VTFSEPYPAWKELFNNILPAHIVKDVPGGFAAGLARALPVTGGQFRVESIDPQRDEILIA 247 Query 241 RNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 300 RNDRYWGPP+KPG+ILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR Sbjct 248 RNDRYWGPPAKPGLILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 307 Query 301 IVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDP 360 IVTPRVMQ TLRA PKLADTQVRKAILGLLDVDLLAAVGAG+DNTVTLDQAQIR+PSDP Sbjct 308 IVTPRVMQLTLRATQPKLADTQVRKAILGLLDVDLLAAVGAGSDNTVTLDQAQIRAPSDP 367 Query 361 GYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISK 420 GY PTAPPAM++ AAL LLE +G++V+ NTS SPA P +TGPPEVIRGRISK Sbjct 368 GYEPTAPPAMTTPAALALLEGAGYKVEPNTSASPATPAPGPP----NTGPPEVIRGRISK 423 Query 421 DGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIV 480 DG+QL+L IGVAANDPT+VAVANTAADQLR+VGIAATVLALDPVTLY DALNDNRVDAIV Sbjct 424 DGQQLSLAIGVAANDPTAVAVANTAADQLRNVGIAATVLALDPVTLYRDALNDNRVDAIV 483 Query 481 GWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTA-- 538 GW QAGGNLAT LA+RYGCPALQ+T VPA+ PT AP GP PS P T + PT+ Sbjct 484 GWHQAGGNLATRLAARYGCPALQSTQVPASTEPTPTSPAPGGPAPSTGPATRSATPTSTA 543 Query 539 -PRRPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPI 597 P RP+DP ALV+APSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPI Sbjct 544 PPSRPADPNALVQAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPI 603 Query 598 LQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTG 634 LQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQW KTG Sbjct 604 LQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWTKTG 640 >gi|118616761|ref|YP_905093.1| lipoprotein LpqW [Mycobacterium ulcerans Agy99] gi|118568871|gb|ABL03622.1| conserved lipoprotein LpqW [Mycobacterium ulcerans Agy99] Length=632 Score = 1009 bits (2608), Expect = 0.0, Method: Compositional matrix adjust. Identities = 531/630 (85%), Positives = 566/630 (90%), Gaps = 1/630 (0%) Query 5 SPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGIDWIGP 64 SPVRRVC+TVG L+ + L+GCTVSPPPAPQSTDT +TPPPP TQIIMGID IG Sbjct 3 SPVRRVCLTVGVLITALGVALSGCTVSPPPAPQSTDTTHNTPPPPHP-TQIIMGIDSIGA 61 Query 65 GFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPFTV 124 GFNPHLLSDLSPVNAAISALVLPSAFRP+PDPN+PTGSRW+MDPTLLVSA+VT PFTV Sbjct 62 GFNPHLLSDLSPVNAAISALVLPSAFRPVPDPNSPTGSRWDMDPTLLVSAEVTGQSPFTV 121 Query 125 TYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFA 184 TYKIRPEAQWTDNAPIAADDFWYLW+QMV+QPGVVDPAGY LIT+VQSLEGGKQAVVTFA Sbjct 122 TYKIRPEAQWTDNAPIAADDFWYLWRQMVSQPGVVDPAGYDLITAVQSLEGGKQAVVTFA 181 Query 185 QPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIARNDR 244 QPYPAWRELF ++LPAHIVKD+PGGFA+GLAR LPVTGGQFRVENIDPQRDEILIARNDR Sbjct 182 QPYPAWRELFDNLLPAHIVKDVPGGFAAGLARTLPVTGGQFRVENIDPQRDEILIARNDR 241 Query 245 YWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTP 304 YWGPP+KP +ILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTP Sbjct 242 YWGPPAKPSLILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTP 301 Query 305 RVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGYVP 364 RVMQ TLRAN PKLA+ QVRKAILGLLDVDLLAAVGAG+DNTVTLDQAQ+RSPSDPGYVP Sbjct 302 RVMQLTLRANQPKLAEAQVRKAILGLLDVDLLAAVGAGSDNTVTLDQAQVRSPSDPGYVP 361 Query 365 TAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDGEQ 424 TAPPA+S++AAL LLE +G+Q+++NTSVSPAP P STTT VSTGPPEVI G ISKDG Q Sbjct 362 TAPPALSTSAALALLEGAGYQIESNTSVSPAPPGPGSTTTPVSTGPPEVIPGGISKDGRQ 421 Query 425 LTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIVGWRQ 484 LTLVIGVAANDPTSVAVANTAADQLR+VGIAA+VLALDPVTLY DALNDNRVDAIVGW Q Sbjct 422 LTLVIGVAANDPTSVAVANTAADQLRNVGIAASVLALDPVTLYGDALNDNRVDAIVGWHQ 481 Query 485 AGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPRRPSD 544 AGGNLATLLASRYGCPALQ T V P P+A G PSA P TP P AP P Sbjct 482 AGGNLATLLASRYGCPALQTTEVWEPTIPANTPAATTGSMPSAVPSAVTPVPPAPSEPPG 541 Query 545 PGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIV 604 AL +APSNLTGICD SIQSNIDAALNGTKNINDVITAVEPRLWNM TVLPILQDTTIV Sbjct 542 ANALFRAPSNLTGICDPSIQSNIDAALNGTKNINDVITAVEPRLWNMWTVLPILQDTTIV 601 Query 605 AAGPSVQNVSLSGAVPVGIVGDAGQWVKTG 634 A GPSV+NVSLSG+VPVGIVGDAGQWVKTG Sbjct 602 AVGPSVRNVSLSGSVPVGIVGDAGQWVKTG 631 >gi|296170057|ref|ZP_06851660.1| ABC superfamily ATP binding cassette transporter, binding protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895267|gb|EFG74977.1| ABC superfamily ATP binding cassette transporter, binding protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=642 Score = 1007 bits (2604), Expect = 0.0, Method: Compositional matrix adjust. Identities = 519/635 (82%), Positives = 568/635 (90%), Gaps = 8/635 (1%) Query 1 MGVPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGID 60 +G+P VRR VTVG + +LA + LA CTV+PPPAPQSTDTP ++PPPP RPTQIIMGID Sbjct 14 IGMPRRVRRFFVTVGVVGSLAGLALAACTVNPPPAPQSTDTPHNSPPPPPRPTQIIMGID 73 Query 61 WIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNH 120 IG GFNPHLLSDLSPVNAAISALVLPSAFRP+PDP TPTGSRWEMDPTLL SA+VT+ Sbjct 74 SIGAGFNPHLLSDLSPVNAAISALVLPSAFRPVPDPATPTGSRWEMDPTLLESAEVTSQD 133 Query 121 PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAV 180 PFTVTYKIRPEAQWTDNAPIAADDFWYLW QMV+QPGVVDPAGY LIT VQSLEGGKQAV Sbjct 134 PFTVTYKIRPEAQWTDNAPIAADDFWYLWHQMVSQPGVVDPAGYDLITGVQSLEGGKQAV 193 Query 181 VTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIA 240 VTFAQPYP+W+ELF++ILPAHIVKD+PGGFA+GLARALPVTGGQFRVE+IDPQRDEIL+A Sbjct 194 VTFAQPYPSWKELFSNILPAHIVKDVPGGFAAGLARALPVTGGQFRVESIDPQRDEILLA 253 Query 241 RNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 300 RNDRYWG P+KP +ILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR Sbjct 254 RNDRYWGTPAKPALILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 313 Query 301 IVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDP 360 IVTPRVMQ TLRAN KLAD QVRKAILGLLDVDLLAAVGAG+DNTVTLDQAQIR+PSDP Sbjct 314 IVTPRVMQLTLRANESKLADAQVRKAILGLLDVDLLAAVGAGSDNTVTLDQAQIRAPSDP 373 Query 361 GYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISK 420 GY PTAPPAM++ AAL LLE +G++V+ N S SPAP T + GPPEVIRGRISK Sbjct 374 GYEPTAPPAMTTPAALALLEGAGYKVEGNGSGSPAP-------TPANPGPPEVIRGRISK 426 Query 421 DGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIV 480 DG+QL+L IGVAANDPTSVAVANTAADQLR+VGIAA+V ALDPVTLY DALN+N+VDAIV Sbjct 427 DGQQLSLAIGVAANDPTSVAVANTAADQLRNVGIAASVRALDPVTLYRDALNNNQVDAIV 486 Query 481 GWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTA-P 539 GW QAGGNLAT LASRYGCPAL++T VP + P+T A GPT + +AT P +A P Sbjct 487 GWHQAGGNLATRLASRYGCPALESTQVPTSAGPSTTAPASGGPTTTGPNPSATTPTSAPP 546 Query 540 RRPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQ 599 RP+DP ALV+APSNLTGICDRS+QSNIDAALNGTKNINDV+TAVEPRLWNMSTVLPILQ Sbjct 547 SRPADPNALVQAPSNLTGICDRSVQSNIDAALNGTKNINDVVTAVEPRLWNMSTVLPILQ 606 Query 600 DTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTG 634 DTTIVAAGPSVQNVSL+GAVPVGIVGDAGQWVKTG Sbjct 607 DTTIVAAGPSVQNVSLTGAVPVGIVGDAGQWVKTG 641 >gi|254774185|ref|ZP_05215701.1| LpqW [Mycobacterium avium subsp. avium ATCC 25291] Length=641 Score = 1007 bits (2604), Expect = 0.0, Method: Compositional matrix adjust. Identities = 526/637 (83%), Positives = 569/637 (90%), Gaps = 7/637 (1%) Query 1 MGVPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGID 60 + VP VRRV + +G LV++ +VL+ CTV+PPPAPQSTDTP ++ PPP R +QIIMGID Sbjct 8 ISVPRRVRRVFMVLGGLVSVVGLVLSACTVNPPPAPQSTDTPHNSVPPPPRVSQIIMGID 67 Query 61 WIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNH 120 IG GFNPHLLSDLSPVNAAISALVLPSAFRP+PDPNTPTGSRWEMDPTLLVSA+VT+ + Sbjct 68 SIGAGFNPHLLSDLSPVNAAISALVLPSAFRPVPDPNTPTGSRWEMDPTLLVSAEVTSQN 127 Query 121 PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAV 180 PFTVTYKIRPEAQWTDNAPIAADDFWYLW QMV+QPGVVDPAGY LIT VQSLEGGKQAV Sbjct 128 PFTVTYKIRPEAQWTDNAPIAADDFWYLWHQMVSQPGVVDPAGYDLITGVQSLEGGKQAV 187 Query 181 VTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIA 240 VTF++PYPAW+ELF +ILPAHIVKD+PGGFA+GLARALPVTGGQFRVE+IDPQRDEILIA Sbjct 188 VTFSEPYPAWKELFNNILPAHIVKDVPGGFAAGLARALPVTGGQFRVESIDPQRDEILIA 247 Query 241 RNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 300 RNDRYWGPP+KPG+ILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR Sbjct 248 RNDRYWGPPAKPGLILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 307 Query 301 IVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDP 360 IVTPRVMQ TLRA PKLADTQVRKAILGLLDVDLLAAVGAG+DNTVTLDQAQIR+PSDP Sbjct 308 IVTPRVMQLTLRATQPKLADTQVRKAILGLLDVDLLAAVGAGSDNTVTLDQAQIRAPSDP 367 Query 361 GYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISK 420 GY PTAPPAM++ AAL LLE +G++V+ NTS SPA P +TGPPEVIRGRISK Sbjct 368 GYEPTAPPAMTTPAALALLEGAGYKVEPNTSASPATPAPGPP----NTGPPEVIRGRISK 423 Query 421 DGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIV 480 DG+QL+L IGVAANDPT+VAVANTAADQLR+VGIAATVLALDPVTLY DALNDNRVDAIV Sbjct 424 DGQQLSLAIGVAANDPTAVAVANTAADQLRNVGIAATVLALDPVTLYRDALNDNRVDAIV 483 Query 481 GWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDT---ATPPPT 537 GW QAGGNLAT LA+RYGCPALQ+T VPA+ PT AP GP PS P T Sbjct 484 GWHQAGGNLATRLAARYGCPALQSTQVPASTEPTPTSPAPGGPAPSTGPATRSATPTSTP 543 Query 538 APRRPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPI 597 P RP+DP ALV+APSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPI Sbjct 544 PPSRPADPNALVQAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPI 603 Query 598 LQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTG 634 LQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQW KTG Sbjct 604 LQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWTKTG 640 >gi|118467073|ref|YP_880553.1| extracellular solute-binding protein, family protein 5 [Mycobacterium avium 104] gi|118168360|gb|ABK69257.1| bacterial extracellular solute-binding protein, family protein 5 [Mycobacterium avium 104] Length=647 Score = 1006 bits (2601), Expect = 0.0, Method: Compositional matrix adjust. Identities = 526/637 (83%), Positives = 569/637 (90%), Gaps = 7/637 (1%) Query 1 MGVPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGID 60 + VP VRRV + +G LV++ +VL+ CTV+PPPAPQSTDTP ++ PPP R +QIIMGID Sbjct 14 ISVPRRVRRVFMVLGGLVSVVGLVLSACTVNPPPAPQSTDTPHNSVPPPPRVSQIIMGID 73 Query 61 WIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNH 120 IG GFNPHLLSDLSPVNAAISALVLPSAFRP+PDPNTPTGSRWEMDPTLLVSA+VT+ + Sbjct 74 SIGAGFNPHLLSDLSPVNAAISALVLPSAFRPVPDPNTPTGSRWEMDPTLLVSAEVTSQN 133 Query 121 PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAV 180 PFTVTYKIRPEAQWTDNAPIAADDFWYLW QMV+QPGVVDPAGY LIT VQSLEGGKQAV Sbjct 134 PFTVTYKIRPEAQWTDNAPIAADDFWYLWHQMVSQPGVVDPAGYDLITGVQSLEGGKQAV 193 Query 181 VTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIA 240 VTF++PYPAW+ELF +ILPAHIVKD+PGGFA+GLARALPVTGGQFRVE+IDPQRDEILIA Sbjct 194 VTFSEPYPAWKELFNNILPAHIVKDVPGGFAAGLARALPVTGGQFRVESIDPQRDEILIA 253 Query 241 RNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 300 RNDRYWGPP+KPG+ILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR Sbjct 254 RNDRYWGPPAKPGLILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 313 Query 301 IVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDP 360 IVTPRVMQ TLRA PKLADTQVRKAILGLLDVDLLAAVGAG+DNTVTLDQAQIR+PSDP Sbjct 314 IVTPRVMQLTLRATQPKLADTQVRKAILGLLDVDLLAAVGAGSDNTVTLDQAQIRAPSDP 373 Query 361 GYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISK 420 GY PTAPPAM++ AAL LLE +G++V+ NTS SPA P +TGPPEVIRGRISK Sbjct 374 GYEPTAPPAMTTPAALALLEGAGYKVEPNTSASPATPAPGPP----NTGPPEVIRGRISK 429 Query 421 DGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIV 480 DG+QL+L IGVAANDPT+VAVANTAADQLR+VGIAATVLALDPVTLY DALNDNRVDAIV Sbjct 430 DGQQLSLAIGVAANDPTAVAVANTAADQLRNVGIAATVLALDPVTLYRDALNDNRVDAIV 489 Query 481 GWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDT---ATPPPT 537 GW QAGGNLAT LA+RYGCPALQ+T VPA+ PT AP GP PS P T Sbjct 490 GWHQAGGNLATRLAARYGCPALQSTQVPASTEPTPTSPAPGGPAPSTGPATRSATPTSTP 549 Query 538 APRRPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPI 597 P RP+DP ALV+APSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPI Sbjct 550 PPSRPADPNALVQAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPI 609 Query 598 LQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTG 634 LQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQW KTG Sbjct 610 LQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWTKTG 646 >gi|254818777|ref|ZP_05223778.1| LpqW [Mycobacterium intracellulare ATCC 13950] Length=644 Score = 996 bits (2574), Expect = 0.0, Method: Compositional matrix adjust. Identities = 517/637 (82%), Positives = 566/637 (89%), Gaps = 10/637 (1%) Query 1 MGVPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGID 60 + VP VRR+ + +G LV+L +V++ CTV+PPPAPQSTDTP ++ PPP R ++IIMGID Sbjct 14 ISVPRRVRRLFMVLGGLVSLVGLVVSACTVNPPPAPQSTDTPHNSVPPPPRVSEIIMGID 73 Query 61 WIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNH 120 IG GFNPHLLSDLSPVNAAISALVLPSAFRP+PD PTGSRWEMDPTLLVSADVT+ + Sbjct 74 SIGAGFNPHLLSDLSPVNAAISALVLPSAFRPVPDTAAPTGSRWEMDPTLLVSADVTSQN 133 Query 121 PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAV 180 PFTVTYKIRPEAQWTDNAPIAADDFWYLW+QMV+QPGVVDPAGY LIT VQSLEGGKQAV Sbjct 134 PFTVTYKIRPEAQWTDNAPIAADDFWYLWRQMVSQPGVVDPAGYDLITGVQSLEGGKQAV 193 Query 181 VTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIA 240 VTFAQPYPAW+ELF++ILPAHIVKD+PGGFA+GLARALPVTGGQFRVE+IDPQRDEIL+A Sbjct 194 VTFAQPYPAWKELFSNILPAHIVKDVPGGFAAGLARALPVTGGQFRVESIDPQRDEILVA 253 Query 241 RNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 300 RNDRYWGPP+KP +ILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR Sbjct 254 RNDRYWGPPAKPALILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 313 Query 301 IVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDP 360 IVTPRVMQ TLRAN PKL+DTQVRKAILGLLDVDLLAAVGAG+DNTVTLDQAQIR+PSDP Sbjct 314 IVTPRVMQLTLRANEPKLSDTQVRKAILGLLDVDLLAAVGAGSDNTVTLDQAQIRAPSDP 373 Query 361 GYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISK 420 GY PTAPPAM++AAAL LL+ +G++V+ N+S SPAP T +TGPPEVIRGRISK Sbjct 374 GYEPTAPPAMTTAAALTLLQGAGYRVEPNSSASPAP-------TPANTGPPEVIRGRISK 426 Query 421 DGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIV 480 DG+QL+L IGVAANDPTSVAVANTAADQLR+VGIAATVLALDPVTLY DALND RVDAIV Sbjct 427 DGQQLSLAIGVAANDPTSVAVANTAADQLRNVGIAATVLALDPVTLYRDALNDGRVDAIV 486 Query 481 GWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTP---SAAPDTATPPPT 537 GW QAGGNLAT LASRYGCPALQ+T VP+ T SAP GP P Sbjct 487 GWHQAGGNLATRLASRYGCPALQSTQVPSTGETTPVSSAPAGPPPSTGPGTTTATPTSAP 546 Query 538 APRRPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPI 597 P RP+DP ALV+APSNLTGICDRS+QSNIDAALNGTK+INDVITAVEPRLWNMSTVLPI Sbjct 547 PPSRPADPNALVQAPSNLTGICDRSVQSNIDAALNGTKSINDVITAVEPRLWNMSTVLPI 606 Query 598 LQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTG 634 LQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQW+KTG Sbjct 607 LQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWIKTG 643 >gi|15827788|ref|NP_302051.1| hypothetical protein ML1497 [Mycobacterium leprae TN] gi|221230265|ref|YP_002503681.1| putative secreted protein [Mycobacterium leprae Br4923] gi|13093340|emb|CAC30447.1| possible secreted protein [Mycobacterium leprae] gi|219933372|emb|CAR71591.1| possible secreted protein [Mycobacterium leprae Br4923] Length=617 Score = 995 bits (2572), Expect = 0.0, Method: Compositional matrix adjust. Identities = 507/632 (81%), Positives = 553/632 (88%), Gaps = 16/632 (2%) Query 3 VPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGIDWI 62 +P RRV T+ L++L ++L CTVS PPAPQST+TPRS+ PPR TQIIMGID I Sbjct 1 MPRRARRVVTTMSVLISLVDLMLVACTVSTPPAPQSTETPRSSLLPPRI-TQIIMGIDSI 59 Query 63 GPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPF 122 G GFNPHLLSDLS VNAAISALVLPSAFRP DPN+PTG RW+MDPT+LVSADVTN +PF Sbjct 60 GAGFNPHLLSDLSAVNAAISALVLPSAFRPATDPNSPTGLRWDMDPTVLVSADVTNQNPF 119 Query 123 TVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVT 182 TVTYKIRPEAQWTDNAPIAADDFWYLW+QMV+QPGVVDPAGY LIT VQSLEGGKQAVVT Sbjct 120 TVTYKIRPEAQWTDNAPIAADDFWYLWRQMVSQPGVVDPAGYDLITGVQSLEGGKQAVVT 179 Query 183 FAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIARN 242 FAQPYPAWRELF++ILPAHIVKD+PGGFA+GLAR LPVTGGQFRVENIDPQRDEILIARN Sbjct 180 FAQPYPAWRELFSNILPAHIVKDVPGGFAAGLARTLPVTGGQFRVENIDPQRDEILIARN 239 Query 243 DRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIV 302 DRYWGPP+KPG+ILFRRAGAPA LADSVRNGDTQ+AQVHGGSAAFAQLSAIP VRTARIV Sbjct 240 DRYWGPPAKPGLILFRRAGAPATLADSVRNGDTQLAQVHGGSAAFAQLSAIPGVRTARIV 299 Query 303 TPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGY 362 TPRVMQFTLRANVPKLAD ++RKAILGLLDVDLLAAVGAG+DNTVTLDQAQ RSPSDPGY Sbjct 300 TPRVMQFTLRANVPKLADIRIRKAILGLLDVDLLAAVGAGSDNTVTLDQAQTRSPSDPGY 359 Query 363 VPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDG 422 PTAPPA+++ AA+ LL ASGFQ+D T SP P ++T SVSTGP EVI GRISKDG Sbjct 360 EPTAPPALTTPAAMALLIASGFQIDPITLASPTP----NSTASVSTGPLEVIHGRISKDG 415 Query 423 EQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIVGW 482 EQL+LVIGVA+NDPTSVAVANTAADQLR+VGIAATVLALDPV LY DALNDN VDAIVGW Sbjct 416 EQLSLVIGVASNDPTSVAVANTAADQLRNVGIAATVLALDPVVLYRDALNDNLVDAIVGW 475 Query 483 RQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPRRP 542 QAGGNLATLLASRYGCPALQAT V +N PT + P+GP P++ +P Sbjct 476 HQAGGNLATLLASRYGCPALQATEVSTSNTPTASFVGPVGPM--QPPNSHSP-------- 525 Query 543 SDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTT 602 +PG LV+APSNLTGICD SIQ+ IDAALNG+KNINDVITAVEPRLWNMSTVLPILQDTT Sbjct 526 -EPGTLVRAPSNLTGICDHSIQATIDAALNGSKNINDVITAVEPRLWNMSTVLPILQDTT 584 Query 603 IVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTG 634 IV AGPSVQN+SLSGAVP+GIVGDAGQW K G Sbjct 585 IVVAGPSVQNISLSGAVPIGIVGDAGQWTKIG 616 >gi|240171698|ref|ZP_04750357.1| lipoprotein LpqW [Mycobacterium kansasii ATCC 12478] Length=630 Score = 992 bits (2564), Expect = 0.0, Method: Compositional matrix adjust. Identities = 539/634 (86%), Positives = 576/634 (91%), Gaps = 5/634 (0%) Query 1 MGVPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGID 60 MGV R V VTVG L++ + L+GCTVSPPPAPQSTDT TPPPP PTQIIMGID Sbjct 1 MGVLHQARHVLVTVGVLISTLGVALSGCTVSPPPAPQSTDTTHVTPPPPPHPTQIIMGID 60 Query 61 WIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNH 120 IG GFNPHLLSDLSPVNAAISALVLPSAFRP+PD ++PTGSRWEMDPTLLVSADVT+ + Sbjct 61 SIGAGFNPHLLSDLSPVNAAISALVLPSAFRPVPDASSPTGSRWEMDPTLLVSADVTSEN 120 Query 121 PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAV 180 PFTV+YKIRPEAQWTDNAPIAADDFWYLW+QMV+QPGVVDPAGY LIT VQSLEGGKQAV Sbjct 121 PFTVSYKIRPEAQWTDNAPIAADDFWYLWRQMVSQPGVVDPAGYDLITGVQSLEGGKQAV 180 Query 181 VTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIA 240 VTFAQPYPAWRELF ++LPAHIVKD+PGGFA+GLARALPVTGGQFRVENIDPQRDEILIA Sbjct 181 VTFAQPYPAWRELFNNLLPAHIVKDVPGGFAAGLARALPVTGGQFRVENIDPQRDEILIA 240 Query 241 RNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 300 RNDRYWGPP+KPG+ILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR Sbjct 241 RNDRYWGPPAKPGLILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 300 Query 301 IVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDP 360 IVTPRVMQ TLRANVPKLADTQVRKAILGLLD+DLLAAVGAG+DNTVTLDQAQIRSPSDP Sbjct 301 IVTPRVMQLTLRANVPKLADTQVRKAILGLLDIDLLAAVGAGSDNTVTLDQAQIRSPSDP 360 Query 361 GYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISK 420 GYVPTAPPAM++ ALGLL ASG+++D+NTS S AP P S TT VSTGPPEVIRGR+SK Sbjct 361 GYVPTAPPAMTTTTALGLLAASGYEIDSNTSASTAPPGPGS-TTPVSTGPPEVIRGRVSK 419 Query 421 DGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIV 480 DG+QL+LVIGVAANDPTSVAVANTAADQLR+VGI ATVLALDPV LY DALNDNR+DAIV Sbjct 420 DGKQLSLVIGVAANDPTSVAVANTAADQLRNVGIDATVLALDPVVLYRDALNDNRIDAIV 479 Query 481 GWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPR 540 GW QAGGNLATLLASRY CPALQAT VP +P P+ G TP+ APDT P P P Sbjct 480 GWHQAGGNLATLLASRYSCPALQATQVPPPASPAVTPT---GATPTVAPDTVVPTPQ-PG 535 Query 541 RPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQD 600 P+DPGALVKAPSNLTGICDRSIQSNIDAAL+GTKNINDVITA+EPRLWNMSTVLPILQD Sbjct 536 PPADPGALVKAPSNLTGICDRSIQSNIDAALDGTKNINDVITAIEPRLWNMSTVLPILQD 595 Query 601 TTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTG 634 TTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTG Sbjct 596 TTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTG 629 >gi|342862058|ref|ZP_08718701.1| LpqW [Mycobacterium colombiense CECT 3035] gi|342130362|gb|EGT83677.1| LpqW [Mycobacterium colombiense CECT 3035] Length=632 Score = 986 bits (2549), Expect = 0.0, Method: Compositional matrix adjust. Identities = 513/635 (81%), Positives = 559/635 (89%), Gaps = 7/635 (1%) Query 3 VPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGIDWI 62 +P VRR+ + + LV+ VL+ CTV+PPPAPQSTDTP ++ PPP R ++IIMGID I Sbjct 1 MPRRVRRLFMVLAGLVSSVGFVLSACTVNPPPAPQSTDTPHNSVPPPPRVSEIIMGIDSI 60 Query 63 GPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPF 122 G GFNPHLLSDLSPVNAAISALVLPSAFRP+PDPN PTGSRWEMDPTLLVSA+VT+ +PF Sbjct 61 GAGFNPHLLSDLSPVNAAISALVLPSAFRPVPDPNAPTGSRWEMDPTLLVSAEVTSQNPF 120 Query 123 TVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVT 182 TVTYKIRPEAQWTDNAPIAADDFWYLW QMV+QPGVVDPAGY LIT VQSLEGGKQAVVT Sbjct 121 TVTYKIRPEAQWTDNAPIAADDFWYLWHQMVSQPGVVDPAGYDLITGVQSLEGGKQAVVT 180 Query 183 FAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIARN 242 FA+PYP+W+ELF++ILPAHIVKD+PGGFA+GLARA+PVTGGQFRVE+IDPQRDEIL+ARN Sbjct 181 FAEPYPSWKELFSNILPAHIVKDVPGGFAAGLARAMPVTGGQFRVESIDPQRDEILVARN 240 Query 243 DRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIV 302 DRYWG P+KP +ILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIV Sbjct 241 DRYWGSPAKPALILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIV 300 Query 303 TPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGY 362 TPRVMQ TLRAN KLADTQVRKAILGLLDVDLLAAVGAG+DNTVTLDQAQIR+PSDPGY Sbjct 301 TPRVMQLTLRANEAKLADTQVRKAILGLLDVDLLAAVGAGSDNTVTLDQAQIRAPSDPGY 360 Query 363 VPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDG 422 PTAPPAM++ AAL LLE +G++V+ N S S AP P T EVIRGRISKDG Sbjct 361 EPTAPPAMTTPAALALLEGAGYKVEPNASPSGAPPAPTPPNTGPP----EVIRGRISKDG 416 Query 423 EQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIVGW 482 +QL+LVIGVAANDPTSVAVANTAAD+LR+VGIAATVLALDPVTLYHDALNDNRVDAIVGW Sbjct 417 QQLSLVIGVAANDPTSVAVANTAADRLRNVGIAATVLALDPVTLYHDALNDNRVDAIVGW 476 Query 483 RQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIG---PTPSAAPDTATPPPTAP 539 QAGGNLA LASRYGC AL++T VP +NAP AP+ G T AA T P Sbjct 477 HQAGGNLAARLASRYGCRALESTQVPISNAPAPAPTTSAGPTPSTSPAATSTTPTTTPPP 536 Query 540 RRPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQ 599 RP+DP ALV+APSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQ Sbjct 537 SRPADPNALVQAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQ 596 Query 600 DTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTG 634 DTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTG Sbjct 597 DTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTG 631 >gi|315443219|ref|YP_004076098.1| peptide ABC transporter, periplasmic component [Mycobacterium sp. Spyr1] gi|315261522|gb|ADT98263.1| ABC-type dipeptide transport system, periplasmic component [Mycobacterium sp. Spyr1] Length=600 Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust. Identities = 454/619 (74%), Positives = 508/619 (83%), Gaps = 24/619 (3%) Query 22 CMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGIDWIGPGFNPHLLSDLSPVNAAI 81 ++++GCTVSPPPAPQSTDT STPPPP + TQII+ ID IGPGFN HLLSD SPVNAAI Sbjct 1 MLLVSGCTVSPPPAPQSTDTTESTPPPPMKATQIIVAIDSIGPGFNSHLLSDQSPVNAAI 60 Query 82 SALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPFTVTYKIRPEAQWTDNAPIA 141 SALVLPS+FRPIPD TPTGSRWEMD TLL SA+VT+ +PFTVTYKIRPEAQWTDNAPI Sbjct 61 SALVLPSSFRPIPDSQTPTGSRWEMDTTLLESAEVTSQNPFTVTYKIRPEAQWTDNAPIG 120 Query 142 ADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFAQPYPAWRELFTDILPAH 201 ADDFWYLW+QMV+QPG VDPAGY LIT VQS+EGGK AVVTFAQPYPAWRELF DILPAH Sbjct 121 ADDFWYLWRQMVSQPGAVDPAGYDLITGVQSVEGGKTAVVTFAQPYPAWRELFNDILPAH 180 Query 202 IVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIARNDRYWGPPSKPGIILFRRAG 261 IVKD+PGGF++GLA+ALPVTGGQFRV+ IDPQRDEIL+ARNDRYWG P+ P +ILFRR G Sbjct 181 IVKDVPGGFSAGLAQALPVTGGQFRVDTIDPQRDEILLARNDRYWGVPATPDLILFRRGG 240 Query 262 APAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTPRVMQFTLRANVPKLADT 321 APAALADS+RNGDTQVAQVHGGSA FAQLSAIPDVRTARIVTPRVMQ TLRA P L++ Sbjct 241 APAALADSIRNGDTQVAQVHGGSAVFAQLSAIPDVRTARIVTPRVMQLTLRARRPALSEA 300 Query 322 QVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGYVPTAPPAMSSAAALGLLEA 381 VRKAILGLLDVDLLAAVGAG DNTVTL QAQ+RSPSDPGYVPT+PPAM+ A+ LL Sbjct 301 PVRKAILGLLDVDLLAAVGAGDDNTVTLAQAQVRSPSDPGYVPTSPPAMAREEAISLLAE 360 Query 382 SGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDGEQLTLVIGVAANDPTSVAV 441 +G++++ + S PPE RGRI +DGE LTLV+GVAANDPTS+AV Sbjct 361 AGYEIEPSES---------------GVTPPESDRGRIVRDGEPLTLVLGVAANDPTSLAV 405 Query 442 ANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIVGWRQAGGNLATLLASRYGCPA 501 ANTAADQLR+VGI A+V ALDPVTLY +AL D+ VDA+VGW AGG+LAT LASRYGCPA Sbjct 406 ANTAADQLRNVGIQASVSALDPVTLYGEALVDDTVDAVVGWHPAGGDLATSLASRYGCPA 465 Query 502 LQAT---TVPAANAPTTAPS-APIG-PTPSAAPDTATPPPTAPRRPSDPGALVKAPSNLT 556 L+AT T P A P+ P+ AP G P P TPP AP +PG LV+APSN+T Sbjct 466 LEATAVPTTPGAKTPSPPPTDAPAGTPPPRTTATQTTPPSPAP----EPGELVQAPSNIT 521 Query 557 GICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVAAGPSVQNVSLS 616 GICD +IQ IDAAL GT +I +VI VEPRLW MSTVLPILQDTTIVAAGPSV+NVSL+ Sbjct 522 GICDHTIQPRIDAALRGTADIAEVIDEVEPRLWEMSTVLPILQDTTIVAAGPSVENVSLT 581 Query 617 GAVPVGIVGDAGQWVKTGQ 635 GAVPVGIVGDAG WVK Q Sbjct 582 GAVPVGIVGDAGDWVKLPQ 600 >gi|118471180|ref|YP_889376.1| extracellular solute-binding protein, family protein 5 [Mycobacterium smegmatis str. MC2 155] gi|294956587|sp|A0R2I8.1|LPQW_MYCS2 RecName: Full=Probable monoacyl phosphatidylinositol tetramannoside-binding protein LpqW; Flags: Precursor gi|118172467|gb|ABK73363.1| bacterial extracellular solute-binding protein, family protein 5 [Mycobacterium smegmatis str. MC2 155] Length=627 Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust. Identities = 476/636 (75%), Positives = 534/636 (84%), Gaps = 13/636 (2%) Query 1 MGVPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRR-PTQIIMGI 59 MGVP+P RR +T GAL+A+ ++L GCTVSPPPAPQST+T +TPPPP + PTQIIM I Sbjct 1 MGVPTPARRARLTFGALLAVPTLLLGGCTVSPPPAPQSTETTETTPPPPPKAPTQIIMAI 60 Query 60 DWIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNN 119 D IGPGFNPHLLSD SPVNAAI++LVLPS+FRP+PDP +PTGSRWE+D TLL SA+VTN Sbjct 61 DSIGPGFNPHLLSDQSPVNAAIASLVLPSSFRPVPDPTSPTGSRWELDTTLLESAEVTNE 120 Query 120 HPFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQA 179 +PFTVTYKIRPEAQWTDNAPIAADD+WYLW+QMV+QPGVVDPAGY LIT VQS+EGGKQA Sbjct 121 NPFTVTYKIRPEAQWTDNAPIAADDYWYLWRQMVSQPGVVDPAGYDLITGVQSVEGGKQA 180 Query 180 VVTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILI 239 VVTF+QPYPAWRELF DILPAHIVKDIPGGF +GLARA+PVTGGQFRVE IDPQRDEIL+ Sbjct 181 VVTFSQPYPAWRELFNDILPAHIVKDIPGGFGAGLARAMPVTGGQFRVETIDPQRDEILL 240 Query 240 ARNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTA 299 ARNDR+W P+KP ++LFRR GAPAALADS+RNGDTQVAQVHGG+A FAQLSAIPDVRTA Sbjct 241 ARNDRFWSVPAKPDLVLFRRGGAPAALADSIRNGDTQVAQVHGGAATFAQLSAIPDVRTA 300 Query 300 RIVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSD 359 RIVTPRVMQ TLRA PKLAD QVRKAILGL+DVDLLA+VGAG DNTVTL QAQ+RSPSD Sbjct 301 RIVTPRVMQLTLRAQQPKLADPQVRKAILGLIDVDLLASVGAGDDNTVTLAQAQVRSPSD 360 Query 360 PGYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRIS 419 PGYVPTAPPAM+ AL LL +G+ + P P PD+T PP+ R RI Sbjct 361 PGYVPTAPPAMTRDDALELLRDAGYVSE------PVPP-PDNTA---DDPPPDNGRERIV 410 Query 420 KDGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAI 479 KDG LT+V+GVA+NDPTSVAVANTAADQLR+VGI A+VLALDPV LY DAL +NRVDA+ Sbjct 411 KDGVPLTIVLGVASNDPTSVAVANTAADQLRNVGIDASVLALDPVALYGDALVNNRVDAV 470 Query 480 VGWRQAGGNLATLLASRYGCPALQATTVPAA--NAPTTAPSAPIGPTPSAAPDTATPPPT 537 VGWRQAGG+LAT+LASRYGC AL+AT V A TT AP T + P T TP PT Sbjct 471 VGWRQAGGDLATVLASRYGCRALEATPVATAVPGPATTTSQAPTTTTTTTPPATTTPTPT 530 Query 538 APRRPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPI 597 AP + G LV+APSN+TGICDRSIQ IDAAL+GT +I DVI AVEPRLWNM+TVLPI Sbjct 531 APIPAPESGELVQAPSNITGICDRSIQPRIDAALDGTDDIADVIQAVEPRLWNMATVLPI 590 Query 598 LQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKT 633 LQDTTIVAAGPSVQNVSL+GAVPVGIVGDAG W KT Sbjct 591 LQDTTIVAAGPSVQNVSLTGAVPVGIVGDAGDWTKT 626 >gi|108801003|ref|YP_641200.1| extracellular solute-binding protein [Mycobacterium sp. MCS] gi|119870144|ref|YP_940096.1| extracellular solute-binding protein [Mycobacterium sp. KMS] gi|126436839|ref|YP_001072530.1| extracellular solute-binding protein [Mycobacterium sp. JLS] gi|108771422|gb|ABG10144.1| extracellular solute-binding protein, family 5 [Mycobacterium sp. MCS] gi|119696233|gb|ABL93306.1| extracellular solute-binding protein, family 5 [Mycobacterium sp. KMS] gi|126236639|gb|ABO00040.1| extracellular solute-binding protein, family 5 [Mycobacterium sp. JLS] Length=624 Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/642 (72%), Positives = 526/642 (82%), Gaps = 27/642 (4%) Query 3 VPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGIDWI 62 +P+ RR VT+GALV+ ++L GCTVSPPPAPQST+TP++TPPP + TQII+ ID I Sbjct 1 MPTRPRRHRVTLGALVSAVALLLGGCTVSPPPAPQSTETPQTTPPPAPKATQIIVAIDSI 60 Query 63 GPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPF 122 GPGFNPHLLSD SPVNAAI+ALVLPS+FRPIPDPNTPTGSRWE+DPTLL SA+VTN +PF Sbjct 61 GPGFNPHLLSDQSPVNAAIAALVLPSSFRPIPDPNTPTGSRWELDPTLLESAEVTNENPF 120 Query 123 TVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVT 182 TVTY IRPEAQWTDNAPI ADD+WYLW+QMV+QPGVVDPAGY LIT VQS+EG KQ VVT Sbjct 121 TVTYNIRPEAQWTDNAPIGADDYWYLWRQMVSQPGVVDPAGYDLITGVQSVEGAKQVVVT 180 Query 183 FAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIARN 242 F+QPYPAWRELF +ILPAHIVKD+PGGF +GLA A+PVTGGQFRVE+IDPQRDEIL+ARN Sbjct 181 FSQPYPAWRELFNNILPAHIVKDVPGGFGAGLAEAMPVTGGQFRVESIDPQRDEILLARN 240 Query 243 DRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIV 302 DRYW P+KP ++LFRR GAPAALADS+RNGDTQVAQVHGG+A FAQLSAIPDVRTARIV Sbjct 241 DRYWSAPAKPDLVLFRRGGAPAALADSIRNGDTQVAQVHGGAATFAQLSAIPDVRTARIV 300 Query 303 TPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGY 362 TPRVMQ TLR +PKLAD VR+AILGLLDVDLLA+VGAG DNTVTL QAQ+RSPSDPGY Sbjct 301 TPRVMQVTLRGQLPKLADPSVRRAILGLLDVDLLASVGAGDDNTVTLAQAQVRSPSDPGY 360 Query 363 VPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDG 422 VPTAPPA+ + AAL LL +G+Q+ +P PD + RGR+SKDG Sbjct 361 VPTAPPALGTEAALELLAEAGYQMAPVGDGAPGAPAPDHS------------RGRLSKDG 408 Query 423 EQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIVGW 482 LTLV+GVAANDPTSVAVANTAADQLR VGI A+VLALDPV LY +AL +NRVDA+VGW Sbjct 409 APLTLVLGVAANDPTSVAVANTAADQLRSVGIEASVLALDPVKLYGEALAENRVDAVVGW 468 Query 483 RQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPT---------PSAAPDTAT 533 QAGG+LAT LASRYGCPAL+AT V TAP+AP G + +A Sbjct 469 HQAGGDLATALASRYGCPALEATPV------QTAPAAPPGSSRPTTTAAPATTAPATPTA 522 Query 534 PPPTAPRRPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMST 593 P T P + GALV+APSN+TG+CDRSIQ IDAAL+G++ I +VI AVEPRLWNM T Sbjct 523 TPTTTPSPAPESGALVQAPSNITGVCDRSIQPKIDAALDGSEPIAEVIDAVEPRLWNMWT 582 Query 594 VLPILQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKTGQ 635 VLPILQDTTIVAAGPSV+NVSL+GAVPVGIVGDAG WVKT Q Sbjct 583 VLPILQDTTIVAAGPSVRNVSLTGAVPVGIVGDAGSWVKTPQ 624 >gi|333989797|ref|YP_004522411.1| hypothetical protein JDM601_1157 [Mycobacterium sp. JDM601] gi|333485765|gb|AEF35157.1| lipoprotein LpqW [Mycobacterium sp. JDM601] Length=615 Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/618 (75%), Positives = 527/618 (86%), Gaps = 8/618 (1%) Query 17 LVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGIDWIGPGFNPHLLSDLSP 76 ++ + + A CTV+PPPAPQST+TP+ST PPP+R +QIIMGID IG GFNPHL SDLS Sbjct 2 MLLVLTQLTAACTVNPPPAPQSTETPKSTAPPPKRVSQIIMGIDSIGAGFNPHLRSDLSA 61 Query 77 VNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPFTVTYKIRPEAQWTD 136 V AAISALVLPSAFRPIPD TPTGSRWEMDPTLLVSA VT PFTVTY+IRPEA WTD Sbjct 62 VTAAISALVLPSAFRPIPDAGTPTGSRWEMDPTLLVSAAVTAEAPFTVTYRIRPEASWTD 121 Query 137 NAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFAQPYPAWRELFTD 196 NAPIAADDFWYLWQQMV+QPGVVDPAGY LIT V S+EGGKQ VVTFA+PYPAWRELF++ Sbjct 122 NAPIAADDFWYLWQQMVSQPGVVDPAGYDLITGVHSVEGGKQVVVTFAKPYPAWRELFSN 181 Query 197 ILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIARNDRYWGPPSKPGIIL 256 ILPAHIVKD+PGGF +GLARALPVTGGQFRVENIDPQRD IL+ARNDRYWGPP+KP ++L Sbjct 182 ILPAHIVKDVPGGFPAGLARALPVTGGQFRVENIDPQRDAILLARNDRYWGPPAKPDLVL 241 Query 257 FRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTPRVMQFTLRANVP 316 FRRAG+PAALADS+RNGDTQVAQVHGGSAAFAQLS IP V+T+R+VTPRVMQ LRA P Sbjct 242 FRRAGSPAALADSIRNGDTQVAQVHGGSAAFAQLSVIPGVQTSRVVTPRVMQLALRAGQP 301 Query 317 KLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGYVPTAPPAMSSAAAL 376 KLAD +VR+A+LGLLDV LLA VGAG+DNTVTL QAQIR+PSDPGYVPTAPPAMS +AAL Sbjct 302 KLADVRVRRAVLGLLDVGLLATVGAGSDNTVTLAQAQIRAPSDPGYVPTAPPAMSDSAAL 361 Query 377 GLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDGEQLTLVIGVAANDP 436 LL+A+G++V+ + P+ VP + PPE+ RGRISKDGEQL+LVIGVAANDP Sbjct 362 ALLQAAGYRVEKDA--PPSALVPPAGAEPAPPHPPEITRGRISKDGEQLSLVIGVAANDP 419 Query 437 TSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIVGWRQAGGNLATLLASR 496 TSVAVANTAADQLR+VGIAATVL LDPV LY +AL ++VDAIVGW+QAGG+LATLLASR Sbjct 420 TSVAVANTAADQLRNVGIAATVLPLDPVKLYREALVTHQVDAIVGWQQAGGDLATLLASR 479 Query 497 YGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPT--APRRPSDPGALVKAPSN 554 YGC AL++TTVP ++ P AP PS+ P T +P PT AP RP+ GALV+APSN Sbjct 480 YGCIALESTTVPTSSGPAPAPVP----APSSPPVTGSPTPTSQAPPRPAGSGALVQAPSN 535 Query 555 LTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVAAGPSVQNVS 614 +TG+CD IQ+ IDAAL+G K I +VI+AVEPRLW+M+TVLPILQDTTIVA GPSV NVS Sbjct 536 VTGVCDHGIQTEIDAALDGGKTIGEVISAVEPRLWSMATVLPILQDTTIVAVGPSVANVS 595 Query 615 LSGAVPVGIVGDAGQWVK 632 L+GAVPVGIVGDAG WVK Sbjct 596 LTGAVPVGIVGDAGTWVK 613 >gi|145222752|ref|YP_001133430.1| extracellular solute-binding protein [Mycobacterium gilvum PYR-GCK] gi|145215238|gb|ABP44642.1| extracellular solute-binding protein, family 5 [Mycobacterium gilvum PYR-GCK] Length=599 Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust. Identities = 450/613 (74%), Positives = 498/613 (82%), Gaps = 15/613 (2%) Query 23 MVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGIDWIGPGFNPHLLSDLSPVNAAIS 82 ++++GCTVSPPPAPQSTDT STPPPP + TQII+ ID IGPGFN HLLSD SPVNAAIS Sbjct 2 LLVSGCTVSPPPAPQSTDTTESTPPPPMKATQIIVAIDSIGPGFNSHLLSDQSPVNAAIS 61 Query 83 ALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPFTVTYKIRPEAQWTDNAPIAA 142 ALVLPS+FRPIPD TPTGSRWEMD TLL SA+VT+ +PFTVTYKIRPEAQWTDNAPI A Sbjct 62 ALVLPSSFRPIPDSQTPTGSRWEMDTTLLESAEVTSQNPFTVTYKIRPEAQWTDNAPIGA 121 Query 143 DDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFAQPYPAWRELFTDILPAHI 202 DDFWYLW+QMV+QPG VDPAGY LIT VQS+EGGK AVVTFAQPYPAWRELF DILPAHI Sbjct 122 DDFWYLWRQMVSQPGAVDPAGYDLITGVQSVEGGKTAVVTFAQPYPAWRELFNDILPAHI 181 Query 203 VKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIARNDRYWGPPSKPGIILFRRAGA 262 VKD+PGGF++GLA+ALPVTGGQFRV+ IDPQRDEIL+ARNDRYWG P+ P +ILFRR GA Sbjct 182 VKDVPGGFSAGLAQALPVTGGQFRVDTIDPQRDEILLARNDRYWGVPATPDLILFRRGGA 241 Query 263 PAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTPRVMQFTLRANVPKLADTQ 322 PAALADS+RNGDTQVAQVHGGSA FAQLSAIPDVRTARIVTPRVM TLRA P L++ Sbjct 242 PAALADSIRNGDTQVAQVHGGSAVFAQLSAIPDVRTARIVTPRVMALTLRARQPALSEAP 301 Query 323 VRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGYVPTAPPAMSSAAALGLLEAS 382 VRKAILGLLDVDLLAAVGAG DNTVTL QAQ+RSPSDPGYVPTAPPAM+ AL LL + Sbjct 302 VRKAILGLLDVDLLAAVGAGDDNTVTLAQAQVRSPSDPGYVPTAPPAMTRDDALSLLAQA 361 Query 383 GFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDGEQLTLVIGVAANDPTSVAVA 442 G++V+ AP G RGRI++DGE LTLV+GVAANDPTS+AVA Sbjct 362 GYEVEPLEVAGQAP----------GNG-----RGRIARDGEPLTLVLGVAANDPTSLAVA 406 Query 443 NTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIVGWRQAGGNLATLLASRYGCPAL 502 NTAADQLR+VGIAA+V ALDPVTLY +AL DN VDA+VGW AGG+LAT LASRYGCPAL Sbjct 407 NTAADQLRNVGIAASVSALDPVTLYGEALVDNTVDAVVGWHPAGGDLATSLASRYGCPAL 466 Query 503 QATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPRRPSDPGALVKAPSNLTGICDRS 562 +AT VP P S P T PT P + G LV+APSN+TGICD + Sbjct 467 EATAVPTTPGAPPPDPPPSETPGSTPPPRTTATPTPPSPAPESGELVQAPSNITGICDHA 526 Query 563 IQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVAAGPSVQNVSLSGAVPVG 622 IQ IDAAL GT +I +VI VEPRLW MSTVLPILQDTTIVAAGPSV+NVSL+GAVPVG Sbjct 527 IQPRIDAALRGTADIAEVIDEVEPRLWEMSTVLPILQDTTIVAAGPSVENVSLTGAVPVG 586 Query 623 IVGDAGQWVKTGQ 635 IVGDAG WVK Q Sbjct 587 IVGDAGDWVKLPQ 599 >gi|112490880|pdb|2GRV|A Chain A, Crystal Structure Of Lpqw gi|112490881|pdb|2GRV|B Chain B, Crystal Structure Of Lpqw gi|112490882|pdb|2GRV|C Chain C, Crystal Structure Of Lpqw Length=621 Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/609 (76%), Positives = 513/609 (85%), Gaps = 13/609 (2%) Query 28 CTVSPPPAPQSTDTPRSTPPPPRR-PTQIIMGIDWIGPGFNPHLLSDLSPVNAAISALVL 86 CTVSPPPAPQST+T +TPPPP + PTQIIM ID IGPGFNPHLLSD SPVNAAI++LVL Sbjct 22 CTVSPPPAPQSTETTETTPPPPPKAPTQIIMAIDSIGPGFNPHLLSDQSPVNAAIASLVL 81 Query 87 PSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPFTVTYKIRPEAQWTDNAPIAADDFW 146 PS+FRP+PDP +PTGSRWE+D TLL SA+VT +PFTVTYKIRPEAQWTDNAPIAADD+W Sbjct 82 PSSFRPVPDPTSPTGSRWELDTTLLESAEVTQENPFTVTYKIRPEAQWTDNAPIAADDYW 141 Query 147 YLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFAQPYPAWRELFTDILPAHIVKDI 206 YLW+QMV+QPGVVDPAGY LIT VQS+EGGKQAVVTF+QPYPAWRELF DILPAHIVKDI Sbjct 142 YLWRQMVSQPGVVDPAGYDLITGVQSVEGGKQAVVTFSQPYPAWRELFNDILPAHIVKDI 201 Query 207 PGGFASGLARALPVTGGQFRVENIDPQRDEILIARNDRYWGPPSKPGIILFRRAGAPAAL 266 PGGF +GLARA+PVTGGQFRVE IDPQRDEIL+ARNDR+W P+KP ++LFRR GAPAAL Sbjct 202 PGGFGAGLARAMPVTGGQFRVETIDPQRDEILLARNDRFWSVPAKPDLVLFRRGGAPAAL 261 Query 267 ADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTPRVMQFTLRANVPKLADTQVRKA 326 ADS+RNGDTQVAQVHGG+A FAQLSAIPDVRTARIVTPRVMQ TLRA PKLAD QVRKA Sbjct 262 ADSIRNGDTQVAQVHGGAATFAQLSAIPDVRTARIVTPRVMQLTLRAQQPKLADPQVRKA 321 Query 327 ILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGYVPTAPPAMSSAAALGLLEASGFQV 386 ILGL+DVDLLA+VGAG DNTVTL QAQ+RSPSDPGYVPTAPPAM+ AL LL +G+ Sbjct 322 ILGLIDVDLLASVGAGDDNTVTLAQAQVRSPSDPGYVPTAPPAMTRDDALELLRDAGYVS 381 Query 387 DTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDGEQLTLVIGVAANDPTSVAVANTAA 446 + P P PD+T PP+ R RI KDG LT+V+GVA+NDPTSVAVANTAA Sbjct 382 E------PVPP-PDNTA---DDPPPDNGRERIVKDGVPLTIVLGVASNDPTSVAVANTAA 431 Query 447 DQLRDVGIAATVLALDPVTLYHDALNDNRVDAIVGWRQAGGNLATLLASRYGCPALQATT 506 DQLR+VGI A+VLALDPV LY DAL +NRVDA+VGWRQAGG+LAT+LASRYGC AL+AT Sbjct 432 DQLRNVGIDASVLALDPVALYGDALVNNRVDAVVGWRQAGGDLATVLASRYGCRALEATP 491 Query 507 VPAA--NAPTTAPSAPIGPTPSAAPDTATPPPTAPRRPSDPGALVKAPSNLTGICDRSIQ 564 V A TT AP T + P T TP PTAP + G LV+APSN+TGICDRSIQ Sbjct 492 VATAVPGPATTTSQAPTTTTTTTPPATTTPTPTAPIPAPESGELVQAPSNITGICDRSIQ 551 Query 565 SNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVAAGPSVQNVSLSGAVPVGIV 624 IDAAL+GT +I DVI AVEPRLWNM+TVLPILQDTTIVAAGPSVQNVSL+GAVPVGIV Sbjct 552 PRIDAALDGTDDIADVIQAVEPRLWNMATVLPILQDTTIVAAGPSVQNVSLTGAVPVGIV 611 Query 625 GDAGQWVKT 633 GDAG W KT Sbjct 612 GDAGDWTKT 620 >gi|120405491|ref|YP_955320.1| extracellular solute-binding protein [Mycobacterium vanbaalenii PYR-1] gi|119958309|gb|ABM15314.1| extracellular solute-binding protein, family 5 [Mycobacterium vanbaalenii PYR-1] Length=608 Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust. Identities = 449/622 (73%), Positives = 498/622 (81%), Gaps = 30/622 (4%) Query 30 VSPPPAPQSTDTPRSTPPPPRRPTQIIMGIDWIGPGFNPHLLSDLSPVNAAISALVLPSA 89 +SPPPAPQSTDT TPPPP + TQII+ ID IGPGFN HLLSD SPVNAAIS+LVLPS+ Sbjct 1 MSPPPAPQSTDTTEVTPPPPMKATQIIVAIDSIGPGFNSHLLSDQSPVNAAISSLVLPSS 60 Query 90 FRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPFTVTYKIRPEAQWTDNAPIAADDFWYLW 149 FRPIPD TPTGSRWE+D +LL SA+VT PFTVTYKIRPEAQWTDNAPI ADD+WYLW Sbjct 61 FRPIPDSRTPTGSRWELDTSLLESAEVTGEDPFTVTYKIRPEAQWTDNAPIGADDYWYLW 120 Query 150 QQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFAQPYPAWRELFTDILPAHIVKDIPGG 209 +QMV+QPG DPAGY LIT VQS+EGGK AVVTFAQPYPAWRE+F DILPAHIVKD+PGG Sbjct 121 RQMVSQPGAADPAGYDLITGVQSVEGGKTAVVTFAQPYPAWREMFNDILPAHIVKDVPGG 180 Query 210 FASGLARALPVTGGQFRVENIDPQRDEILIARNDRYWGPPSKPGIILFRRAGAPAALADS 269 F +GLA+ALPVTGGQFRV+ IDPQRDEIL+ARNDRYWG P+ P +ILFRR GAPAALADS Sbjct 181 FGAGLAQALPVTGGQFRVDTIDPQRDEILLARNDRYWGTPATPDLILFRRGGAPAALADS 240 Query 270 VRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTPRVMQFTLRANVPKLADTQVRKAILG 329 +RNGDTQVAQVHGGSA FAQLSAIPDVRTARIVTPRVM TLRA P LAD VRKA+LG Sbjct 241 IRNGDTQVAQVHGGSAVFAQLSAIPDVRTARIVTPRVMHLTLRAQQPMLADALVRKAVLG 300 Query 330 LLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGYVPTAPPAMSSAAALGLLEASGFQVD-- 387 LLDVDLLAAVGAG DNTVTL QAQ+RSPSDPGYVPTAPPAM+ A+ LL +G+QVD Sbjct 301 LLDVDLLAAVGAGDDNTVTLAQAQVRSPSDPGYVPTAPPAMTREDAMTLLAEAGYQVDPV 360 Query 388 -TNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDGEQLTLVIGVAANDPTSVAVANTAA 446 TS PAP P+S RGR++KDGE LTLV+GVAANDPT+VAVANTAA Sbjct 361 QVPTSPPPAPGAPESN------------RGRLTKDGEPLTLVLGVAANDPTAVAVANTAA 408 Query 447 DQLRDVGIAATVLALDPVTLYHDALNDNRVDAIVGWRQAGGNLATLLASRYGCPALQATT 506 DQLR VGIAATV ALDPV LY DA+ +N++DA++GW AGG+LAT LASRYGCPAL+AT Sbjct 409 DQLRSVGIAATVAALDPVVLYGDAMVNNQIDAVIGWHPAGGDLATSLASRYGCPALEATA 468 Query 507 VP---AANAPTTAPSAPIGPT----------PSAAPDTATPPPTAPRRPSDPGALVKAPS 553 V A APT+ P P G + S P TAT AP SD LV+APS Sbjct 469 VETTTGAPAPTSDPPRPSGTSGPRGPSDPPTTSTTPTTATQTSPAPEPDSD--QLVQAPS 526 Query 554 NLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVAAGPSVQNV 613 N+TGICD IQ IDAAL+GT +I +VI VEPRLW MSTVLPILQDTTIVAAGPSVQ+V Sbjct 527 NITGICDPHIQPRIDAALHGTADIAEVIDEVEPRLWEMSTVLPILQDTTIVAAGPSVQHV 586 Query 614 SLSGAVPVGIVGDAGQWVKTGQ 635 SL+GAVPVGIVGDAG WVK Q Sbjct 587 SLTGAVPVGIVGDAGSWVKLPQ 608 >gi|169628408|ref|YP_001702057.1| putative lipoprotein LpqW [Mycobacterium abscessus ATCC 19977] gi|169240375|emb|CAM61403.1| Putative lipoprotein LpqW [Mycobacterium abscessus] Length=600 Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/633 (63%), Positives = 463/633 (74%), Gaps = 35/633 (5%) Query 1 MGVPSPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGID 60 M SP R+C +G ++LAGC+VS PPA Q ++T ST PPP + QI++GID Sbjct 1 MPTDSPRLRLCAVLG------VVLLAGCSVSAPPAVQGSETTSSTTPPPPKKEQIVVGID 54 Query 61 WIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNH 120 IG GFNPHLLSD SPVN+AISALVLPSAFRP+PD T TGSRWEMDPTLLVSA+ T+ Sbjct 55 SIGAGFNPHLLSDQSPVNSAISALVLPSAFRPVPDSATTTGSRWEMDPTLLVSAEETSQE 114 Query 121 PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAV 180 PFTVTY IRPEAQWTDNAPI ADDF YLWQQM+TQPG VDPAGY IT VQS +GGK+ V Sbjct 115 PFTVTYTIRPEAQWTDNAPIGADDFSYLWQQMLTQPGTVDPAGYGNITDVQSRDGGKRVV 174 Query 181 VTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIA 240 VTF YPAWRELF D+LPAHIVKDIPGGFASGL +++P +GG+FRV+ IDPQRDEIL+A Sbjct 175 VTFDHKYPAWRELFNDLLPAHIVKDIPGGFASGLVKSMPASGGRFRVDTIDPQRDEILLA 234 Query 241 RNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTAR 300 RNDRYW + P ILFRRAGAP LADS+RNGDTQVAQVHG FAQLS IP VRTAR Sbjct 235 RNDRYWATQAVPDEILFRRAGAPTVLADSIRNGDTQVAQVHGSGVTFAQLSNIPGVRTAR 294 Query 301 IVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDP 360 IV PR +Q TLRA P L D +VR+ +LGLLDV LLAAV AG +N+VTL AQ+RSPSDP Sbjct 295 IVAPRTLQLTLRAGQPTLTDAKVRRGLLGLLDVGLLAAVAAGNENSVTLAAAQVRSPSDP 354 Query 361 GYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISK 420 GY PTAP A++ A+L LL+ +G++ N V PAP+ P +I+K Sbjct 355 GYKPTAPVALTRDASLALLKEAGYEAVENPVVPPAPNAPAGPP-------------QITK 401 Query 421 DGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIV 480 DG+ LTLVIG A+NDPTSVAVANTAADQLR+ G+ A+VLALDP TLY A+ D RVDAIV Sbjct 402 DGDPLTLVIGAASNDPTSVAVANTAADQLRNAGVRASVLALDPPTLYGQAIPDGRVDAIV 461 Query 481 GWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPR 540 GW QAGG+LAT LASRYGCPALQA +P T P + + + Sbjct 462 GWHQAGGDLATALASRYGCPALQAGRLPDTRTTTPPPPPASNTPAPPSREDS-------- 513 Query 541 RPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQD 600 V+APSNLTG+CD +Q++IDAAL G ++ V+ EP+LW M+TVLPI+QD Sbjct 514 --------VRAPSNLTGLCDEELQASIDAALTGHADVGKVVDQAEPQLWKMATVLPIMQD 565 Query 601 TTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKT 633 TTI AAGPSVQNV L+GAVPVGIV AG+W KT Sbjct 566 TTIAAAGPSVQNVELAGAVPVGIVATAGEWKKT 598 >gi|325676457|ref|ZP_08156135.1| ABC superfamily ATP binding cassette transporter, binding protein [Rhodococcus equi ATCC 33707] gi|325552635|gb|EGD22319.1| ABC superfamily ATP binding cassette transporter, binding protein [Rhodococcus equi ATCC 33707] Length=602 Score = 573 bits (1478), Expect = 3e-161, Method: Compositional matrix adjust. Identities = 320/607 (53%), Positives = 404/607 (67%), Gaps = 35/607 (5%) Query 28 CTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGIDWIGPGFNPHLLSDLSPVNAAISALVLP 87 CT +PPP +STD+P+ T P + T + + ID +G GFNPHLL+D SPVN+A+SALVLP Sbjct 28 CTANPPPPVESTDSPKPTTAVPTKNT-VAVAIDDVGIGFNPHLLADQSPVNSAVSALVLP 86 Query 88 SAFRPIPDPNTPTGSRWEMDPTLLVSAD-VTNNHPFTVTYKIRPEAQWTDNAPIAADDFW 146 S FRP DP P + W DP++LVSA V P T+TY++R EAQW+D APIAA+DF Sbjct 87 SPFRPALDPARPGVTLWVPDPSVLVSATAVPPEAPTTITYQLRNEAQWSDGAPIAAEDFR 146 Query 147 YLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFAQPYPAWRELFTDILPAHIVKDI 206 YLWQQM+TQPGVVDPAGY LI V+S GGK VT PYPAWRELFTD+LP+H+VKD Sbjct 147 YLWQQMITQPGVVDPAGYGLIDDVESSGGGKTVTVTLTAPYPAWRELFTDLLPSHLVKDT 206 Query 207 PGGFASGLARALPVTGGQFRVENIDPQRDEILIARNDRYWGPPSKPGIILFRRAGAPAAL 266 PGGFA GL ++PV+G QF ++++D RDEI++ RNDR+WG P+K IL RR G+PA L Sbjct 207 PGGFARGLGDSIPVSGAQFHIKSVDRGRDEIVLERNDRFWGTPAKADQILMRRGGSPAQL 266 Query 267 ADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTPRVMQFTLRANVPKLADTQVRKA 326 ADS+R+GD QVA+VHGG+A QLS IP VRT + PRV+ TL V LA+ VRK Sbjct 267 ADSIRSGDAQVARVHGGAATLGQLSVIPSVRTGTELQPRVLSVTLNGRVSTLAEPTVRKG 326 Query 327 ILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGYVPTAPPAMSSAAALGLLEASGFQV 386 + GLLD +LLA VGAG++++ T +AQ+ +PSDPGY PTAPP + A G L +GFQV Sbjct 327 LFGLLDPNLLATVGAGSESSATPARAQVLAPSDPGYAPTAPPPPTREQAFGALAGAGFQV 386 Query 387 DTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDGEQLTLVIGVAANDPTSVAVANTAA 446 VP T + P V GR+ +D EQLTLV+G ND ++AVANT A Sbjct 387 -----------VP---TLAEGNDPETVTVGRLVRDNEQLTLVLGAPENDDIAIAVANTVA 432 Query 447 DQLRDVGIAATVLALDPVTLYHDALNDNRVDAIVGWRQAGGNLATLLASRYGCPALQATT 506 DQ R GIAA+V AL LY +AL VDA+VGW +AG + AT LASR+GC L + Sbjct 433 DQWRGAGIAASVRALKAEDLYGEALTSGTVDAVVGWERAGSDPATSLASRFGCLPLDTSE 492 Query 507 VPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPRRPSDPGALVKAPSNLTGICDRSIQSN 566 +AP T P P P++A ATP P+ V++PSNL+G+CD +Q Sbjct 493 ----SAPDTTPQT-TSPAPTSA---ATPAPS-----------VRSPSNLSGLCDPGLQPG 533 Query 567 IDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVAAGPSVQNVSLSGAVPVGIVGD 626 IDAAL G + VI EPRLW ++ VLP+LQD IV AGP V+ VSL+G +PVGI GD Sbjct 534 IDAALRGLDDPARVIADAEPRLWELAAVLPVLQDNAIVVAGPGVEGVSLAGPIPVGIFGD 593 Query 627 AGQWVKT 633 AG W +T Sbjct 594 AGVWTRT 600 >gi|312138841|ref|YP_004006177.1| high affinity substrate-binding lipoprotein [Rhodococcus equi 103S] gi|311888180|emb|CBH47492.1| putative high affinity substrate binding lipoprotein [Rhodococcus equi 103S] Length=602 Score = 573 bits (1477), Expect = 4e-161, Method: Compositional matrix adjust. Identities = 320/607 (53%), Positives = 404/607 (67%), Gaps = 35/607 (5%) Query 28 CTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGIDWIGPGFNPHLLSDLSPVNAAISALVLP 87 CT +PPP +STD+P+ T P + T + + ID +G GFNPHLL+D SPVN+A+SALVLP Sbjct 28 CTANPPPPVESTDSPKPTTAVPTKNT-VAVAIDDVGIGFNPHLLADQSPVNSAVSALVLP 86 Query 88 SAFRPIPDPNTPTGSRWEMDPTLLVSAD-VTNNHPFTVTYKIRPEAQWTDNAPIAADDFW 146 S FRP DP P + W DP++LVSA V P T+TY++R EAQW+D APIAA+DF Sbjct 87 SPFRPALDPARPGVTLWVPDPSVLVSATAVPPEAPTTITYQLRNEAQWSDGAPIAAEDFR 146 Query 147 YLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFAQPYPAWRELFTDILPAHIVKDI 206 YLWQQM+TQPGVVDPAGY LI V+S GGK VT PYPAWRELFTD+LP+H+VKD Sbjct 147 YLWQQMITQPGVVDPAGYGLIDDVESSGGGKTVTVTLTAPYPAWRELFTDLLPSHLVKDT 206 Query 207 PGGFASGLARALPVTGGQFRVENIDPQRDEILIARNDRYWGPPSKPGIILFRRAGAPAAL 266 PGGFA GL ++PV+G QF ++++D RDEI++ RNDR+WG P+K IL RR G+PA L Sbjct 207 PGGFARGLGDSIPVSGAQFHIKSVDRGRDEIVLERNDRFWGTPAKADQILMRRGGSPAQL 266 Query 267 ADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTPRVMQFTLRANVPKLADTQVRKA 326 ADS+R+GD QVA+VHGG+A QLS IP VRT + PRV+ TL V LA+ VRK Sbjct 267 ADSIRSGDAQVARVHGGAATLGQLSVIPSVRTGTELQPRVLSVTLNGRVSTLAEPTVRKG 326 Query 327 ILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGYVPTAPPAMSSAAALGLLEASGFQV 386 + GLLD +LLA VGAG++++ T +AQ+ +PSDPGY PTAPP + A G L +GFQV Sbjct 327 LFGLLDPNLLATVGAGSESSATPARAQVLAPSDPGYAPTAPPPPTREQAFGALAGAGFQV 386 Query 387 DTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDGEQLTLVIGVAANDPTSVAVANTAA 446 VP T + P V GR+ +D EQLTLV+G ND ++AVANT A Sbjct 387 -----------VP---TLAEGNDPETVTVGRLVRDNEQLTLVLGAPENDDIAIAVANTVA 432 Query 447 DQLRDVGIAATVLALDPVTLYHDALNDNRVDAIVGWRQAGGNLATLLASRYGCPALQATT 506 DQ R GIAA+V AL LY +AL VDA+VGW +AG + AT LASR+GC L + Sbjct 433 DQWRGAGIAASVRALKAEDLYGEALTSGTVDAVVGWERAGSDPATSLASRFGCLPLDTSE 492 Query 507 VPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPRRPSDPGALVKAPSNLTGICDRSIQSN 566 +AP T P P P++A ATP P+ V++PSNL+G+CD +Q Sbjct 493 ----SAPDTTPQT-TSPAPTSA---ATPAPS-----------VRSPSNLSGLCDPVLQPG 533 Query 567 IDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVAAGPSVQNVSLSGAVPVGIVGD 626 IDAAL G + VI EPRLW ++ VLP+LQD IV AGP V+ VSL+G +PVGI GD Sbjct 534 IDAALRGLDDPARVIADAEPRLWELAAVLPVLQDNAIVVAGPGVEGVSLAGPIPVGIFGD 593 Query 627 AGQWVKT 633 AG W +T Sbjct 594 AGVWTRT 600 >gi|229493892|ref|ZP_04387664.1| bacterial extracellular solute-binding protein, family 5 [Rhodococcus erythropolis SK121] gi|229319169|gb|EEN85018.1| bacterial extracellular solute-binding protein, family 5 [Rhodococcus erythropolis SK121] Length=634 Score = 562 bits (1449), Expect = 6e-158, Method: Compositional matrix adjust. Identities = 307/617 (50%), Positives = 396/617 (65%), Gaps = 39/617 (6%) Query 18 VALACMVLAGCTVSPPPAPQSTDTPRSTPPP--PRRPTQIIMGIDWIGPGFNPHLLSDLS 75 VA+ + L CT PPP +ST+T + TP P P Q+ + ID +G GFNPHLL+D S Sbjct 52 VAVTALSLTACTADPPPPVESTETVKPTPTPVVPAM-KQVTVAIDEVGGGFNPHLLADQS 110 Query 76 PVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPFTVTYKIRPEAQWT 135 PVN+A+ LVLPSAFRPI P P + W +D + LVSA+VT+ PFT+ Y++R EAQW+ Sbjct 111 PVNSAVGNLVLPSAFRPINSPTQPGATEWAIDDSFLVSAEVTSEAPFTIRYQLRNEAQWS 170 Query 136 DNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFAQPYPAWRELFT 195 D APIAA+DF YLWQQM++ PGVV+PAGY +I V S GGK V PYPAWRELFT Sbjct 171 DGAPIAAEDFRYLWQQMISVPGVVNPAGYQMIDDVNSSGGGKTVNVVMRAPYPAWRELFT 230 Query 196 DILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIARNDRYWGPPSKPGII 255 DILP+H++KD PGGF++GL+ +PV+G F V ++D RDEI++ RNDR+WG PS P I Sbjct 231 DILPSHLIKDTPGGFSTGLSEGIPVSGAHFHVRSVDRGRDEIVLERNDRFWGKPSDPDQI 290 Query 256 LFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTPRVMQFTLRANV 315 + RR G A LAD++R D QVAQVH GSA QLSAIP VRTA PR + + Sbjct 291 VLRRGGTAAQLADALRTDDAQVAQVHSGSATDIQLSAIPGVRTAFSYVPRTLDINVNGRS 350 Query 316 PKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGYVPTAPPAMSSAAA 375 AD +VRK +LGLLD DLLA V AG+++ +AQI +PSDPGY PTAPP + A Sbjct 351 KNFADVRVRKGVLGLLDPDLLAVVAAGSESASAPVKAQILAPSDPGYAPTAPPKPTREQA 410 Query 376 LGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDGEQLTLVIGVAAND 435 LG L A+G+ AP T + TG V G I +DG QLTL+IG ND Sbjct 411 LGELTAAGYLT--------APP------TGIVTGTGTV--GSIVRDGAQLTLLIGAPEND 454 Query 436 PTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIVGWRQAGGNLATLLAS 495 ++AVANTAAD+LRDVGI ATV ++ P LY + L RVD IVGW +AG + AT LAS Sbjct 455 DIAIAVANTAADELRDVGILATVESVAPEELYGEDLTTGRVDMIVGWSRAGADTATSLAS 514 Query 496 RYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPRRPSDPGALVKAPSNL 555 R+ CP+ A + P T+ + P PTPS P+ P R + V+APSNL Sbjct 515 RFSCPS-------APSTPATSSAVP-APTPSQTPE--------PIRTTS----VEAPSNL 554 Query 556 TGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVAAGPSVQNVSL 615 +G+CD ++Q ID AL+G ++ +I EP+LW+++ VLPI+Q +VA G V+ V L Sbjct 555 SGLCDPALQGRIDEALSGIGDLGSLIADAEPKLWDLAAVLPIVQSRALVAVGTGVEGVVL 614 Query 616 SGAVPVGIVGDAGQWVK 632 G V VGI G+A WV+ Sbjct 615 DGPVQVGIFGNATDWVR 631 >gi|226307678|ref|YP_002767638.1| hypothetical protein RER_41910 [Rhodococcus erythropolis PR4] gi|226186795|dbj|BAH34899.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=594 Score = 559 bits (1440), Expect = 7e-157, Method: Compositional matrix adjust. Identities = 304/620 (50%), Positives = 394/620 (64%), Gaps = 39/620 (6%) Query 18 VALACMVLAGCTVSPPPAPQSTDTPRSTPPP--PRRPTQIIMGIDWIGPGFNPHLLSDLS 75 VA+ + L CT PPP +ST+T + TP P P Q+ + ID +G GFNPHLL+D S Sbjct 12 VAVTALSLTACTADPPPPVESTETVKPTPTPVVPAM-KQVTVAIDEVGGGFNPHLLADQS 70 Query 76 PVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPFTVTYKIRPEAQWT 135 PVN+A+ LVLPSAFRPI P P + W +D + LVSA+VT+ PFT+ Y++R EAQW+ Sbjct 71 PVNSAVGNLVLPSAFRPINSPTQPGATEWAIDDSFLVSAEVTSEAPFTIRYQLRNEAQWS 130 Query 136 DNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFAQPYPAWRELFT 195 D APIAA+DF YLWQQM++ PGVV+PAGY +I V S GGK V PYPAWRELFT Sbjct 131 DGAPIAAEDFRYLWQQMISVPGVVNPAGYQMIDDVNSSGGGKTVNVVMRAPYPAWRELFT 190 Query 196 DILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIARNDRYWGPPSKPGII 255 DILP+H++KD PGGF++GL+ +PV+G F V ++D RDEI++ RNDR+WG PS P I Sbjct 191 DILPSHLIKDTPGGFSTGLSEGIPVSGAHFHVRSVDRGRDEIVLERNDRFWGKPSDPDQI 250 Query 256 LFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTPRVMQFTLRANV 315 + RR G + LAD++R D QVAQVH GSA QLSAIP V TA PR + + Sbjct 251 VLRRGGTASQLADALRTDDAQVAQVHSGSATDIQLSAIPGVSTAFSYVPRTLDINVNGRS 310 Query 316 PKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGYVPTAPPAMSSAAA 375 AD +VRK +LGLLD DLLA V AG+++ +AQI +PSDPGY PTAPP + A Sbjct 311 KNFADVRVRKGVLGLLDPDLLAVVAAGSESASAPVKAQILAPSDPGYAPTAPPKPTREQA 370 Query 376 LGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDGEQLTLVIGVAAND 435 LG L A+G+ AP T + TG V G I +DG QLTL+IG ND Sbjct 371 LGELTAAGYLT--------APP------TGIVTGTGTV--GSIVRDGAQLTLLIGAPEND 414 Query 436 PTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIVGWRQAGGNLATLLAS 495 ++AVANTAAD+LRDVGI ATV ++ P LY + L RVD IVGW +AG + AT LAS Sbjct 415 DIAIAVANTAADELRDVGILATVESVPPEELYGEDLTTGRVDMIVGWSRAGADTATSLAS 474 Query 496 RYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPRRPSDPGALVKAPSNL 555 R+ CP +T + PT PTPS +P+ P R + V+APSNL Sbjct 475 RFSCPTAPSTPATGSAVPT--------PTPSQSPE--------PVRTTS----VEAPSNL 514 Query 556 TGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVAAGPSVQNVSL 615 +G+CD ++Q ID AL+G ++ +I EP+LW+++ VLPI+Q +VA G V+ V L Sbjct 515 SGLCDPALQGRIDEALSGIGDLGSLIADAEPKLWDLAAVLPIVQSRALVAVGTGVEGVVL 574 Query 616 SGAVPVGIVGDAGQWVKTGQ 635 G V VGI G+A WV+ + Sbjct 575 DGPVQVGIFGNATDWVRVAK 594 >gi|226365404|ref|YP_002783187.1| hypothetical protein ROP_59950 [Rhodococcus opacus B4] gi|226243894|dbj|BAH54242.1| hypothetical protein [Rhodococcus opacus B4] Length=583 Score = 556 bits (1433), Expect = 4e-156, Method: Compositional matrix adjust. Identities = 309/620 (50%), Positives = 398/620 (65%), Gaps = 42/620 (6%) Query 17 LVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGIDWIGPGFNPHLLSDLSP 76 ++AL+ L CT PPP +STD+P+ T P + +++ ID +G GFNPHLLSD SP Sbjct 5 VLALSTAALTACTADPPPPVESTDSPKPTVSPTEK-QPVVVAIDDVGSGFNPHLLSDQSP 63 Query 77 VNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPFTVTYKIRPEAQWTD 136 N+A+SALVLPS FRP+PDP P GS W D +L+VSADVT+ PFTVTY++R EAQW+D Sbjct 64 ANSAVSALVLPSPFRPVPDPAHPGGSTWIPDASLVVSADVTSQEPFTVTYQLRNEAQWSD 123 Query 137 NAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFAQPYPAWRELFTD 196 APIAA+DF YLWQQM++ PGVVDPAGY LI V+S GGK V YPAWRELFTD Sbjct 124 GAPIAAEDFRYLWQQMISAPGVVDPAGYDLIQDVRSSGGGKTVTVVMKAAYPAWRELFTD 183 Query 197 ILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIARNDRYWGPPSKPGIIL 256 +LP+H++KD PGGFA+GLA +PV+GG F +++ID RDEIL+ RNDR+W P+ P IL Sbjct 184 LLPSHLIKDSPGGFATGLAENIPVSGGHFHIKSIDRGRDEILLERNDRFWDKPATPDQIL 243 Query 257 FRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTPRVMQFTLRANVP 316 RR G P+ LADS+RN DTQ+ Q+HGG+A AQL+AIP VRT PR + TL VP Sbjct 244 MRRDGTPSQLADSMRNNDTQIVQIHGGTATSAQLAAIPTVRTGASFQPRGLDLTLNGRVP 303 Query 317 KLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGYVPTAPPAMSSAAAL 376 +LAD +VRK++L LLD DLLA VGAG++ + ++Q+ +PSDPGY TAP S L Sbjct 304 ELADVRVRKSLLNLLDTDLLAVVGAGSEASAVPARSQVYAPSDPGYTATAPARPSREQVL 363 Query 377 GLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDGEQLTLVIGVAANDP 436 L G+ +T P T T P R+ ++G LTLVIG D Sbjct 364 AQLAEYGYVAET----------PTGTVVPAGTAAPT----RLVREGVPLTLVIGTPEGDD 409 Query 437 TSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIVGWRQAGGNLATLLASR 496 T+ AVANTAADQLR GI ATV +L LY ++L+ + A+VGW +AG + AT LASR Sbjct 410 TASAVANTAADQLRGAGIDATVTSLPAEELYGESLSKGDIGAVVGWSRAGSDPATALASR 469 Query 497 YGC-PALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPRRPSDPGALVKAPSNL 555 + C PA+ ATT P N T P D + +APSNL Sbjct 470 HSCPPAVVATTQP--NTETAGPE------------------------RDSVSEAEAPSNL 503 Query 556 TGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVAAGPSVQNVSL 615 +G+CD ++Q +IDAAL G ++ + + RLW+++ VLPI+QD T+VAAGP V VSL Sbjct 504 SGVCDPTLQPSIDAALRGVGDVPQALAEADRRLWDLAAVLPIMQDRTLVAAGPGVDGVSL 563 Query 616 SGAVPVGIVGDAGQWVKTGQ 635 SGAVPVGI DA W + + Sbjct 564 SGAVPVGIFSDAADWSRIKE 583 >gi|111022897|ref|YP_705869.1| hypothetical protein RHA1_ro05934 [Rhodococcus jostii RHA1] gi|110822427|gb|ABG97711.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=606 Score = 548 bits (1412), Expect = 1e-153, Method: Compositional matrix adjust. Identities = 304/620 (50%), Positives = 401/620 (65%), Gaps = 42/620 (6%) Query 17 LVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGIDWIGPGFNPHLLSDLSP 76 L+A++ +L CT PPP +STD+P+ T P + +++ ID +G GFNPHLLSD SP Sbjct 28 LLAVSTAMLTSCTADPPPPVESTDSPKPTVSPTEK-QPVVVAIDDVGSGFNPHLLSDQSP 86 Query 77 VNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPFTVTYKIRPEAQWTD 136 N+A+SALVLPS FRP+PDP P G+ W D +L++SADVT+ PFTVTY++R EAQW+D Sbjct 87 ANSAVSALVLPSPFRPVPDPARPGGNTWIPDSSLVISADVTSQEPFTVTYQLRNEAQWSD 146 Query 137 NAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFAQPYPAWRELFTD 196 APIAA+DF YLWQQM++ PGVVDPAGY LI V+S GGK V YPAWRELFTD Sbjct 147 GAPIAAEDFRYLWQQMISAPGVVDPAGYELIEDVRSSGGGKTVSVVMKAAYPAWRELFTD 206 Query 197 ILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIARNDRYWGPPSKPGIIL 256 +LP+H++KD PGGFA+GL+ +PV+GG F +++ID RDEIL+ RNDR+W P+ P IL Sbjct 207 LLPSHLIKDSPGGFATGLSENIPVSGGHFHIKSIDRGRDEILLERNDRFWDKPATPDQIL 266 Query 257 FRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTPRVMQFTLRANVP 316 RR G P+ LA S+RN DT + Q+HGG+A AQL+AIP VRT PR + TL VP Sbjct 267 MRRDGTPSQLAGSMRNNDTHIVQIHGGTATSAQLAAIPTVRTGSSFQPRGLDLTLNGRVP 326 Query 317 KLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGYVPTAPPAMSSAAAL 376 +LAD +VRK++L LLD +LLA VGAG+++ ++Q+ +PSDPGY TA L Sbjct 327 ELADVRVRKSLLELLDTELLAVVGAGSESAAVPARSQVYAPSDPGYTATATARPGREQVL 386 Query 377 GLLEASGFQVDTNT-SVSPAPSVPDSTTTSVSTGPPEVIRGRISKDGEQLTLVIGVAAND 435 L G+ +T T +V PA + P + R+ +DG LTLVIG D Sbjct 387 AQLAEYGYVAETPTGTVVPAGAAPST---------------RLVRDGVPLTLVIGTPEGD 431 Query 436 PTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIVGWRQAGGNLATLLAS 495 T+ AVANTAADQLR G+ ATV +L LY ++L+ + A+VGW +AG + AT LAS Sbjct 432 DTASAVANTAADQLRGAGVDATVTSLPAEELYGESLSKGEIGAVVGWSRAGSDPATALAS 491 Query 496 RYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPRRPSDPGALVKAPSNL 555 R+ CP PA A T P+T T T P R D A +APSNL Sbjct 492 RHSCP-------PAVVAATQ-------------PNTET---TDPER--DSVAEAEAPSNL 526 Query 556 TGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVAAGPSVQNVSL 615 +G+CD ++Q +IDAAL G ++ + + +LW+++ VLPI+QD T+VAAGP V VSL Sbjct 527 SGVCDPTLQPSIDAALRGVGDVPQTLADADRKLWDLAAVLPIMQDRTLVAAGPGVDGVSL 586 Query 616 SGAVPVGIVGDAGQWVKTGQ 635 SGAVPVGI DA W + + Sbjct 587 SGAVPVGIFSDAADWSRIKE 606 >gi|54026732|ref|YP_120974.1| hypothetical protein nfa47580 [Nocardia farcinica IFM 10152] gi|54018240|dbj|BAD59610.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=593 Score = 531 bits (1368), Expect = 1e-148, Method: Compositional matrix adjust. Identities = 302/616 (50%), Positives = 387/616 (63%), Gaps = 44/616 (7%) Query 17 LVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGIDWIGPGFNPHLLSDLSP 76 L+A + +V+AGCT +PPP +STD+P++TP P + T +++ ID IG GFNPHL +D SP Sbjct 20 LLAASVLVVAGCTANPPPPIESTDSPKTTPAKPGKNT-VVVAIDDIGIGFNPHLRADQSP 78 Query 77 VNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPFTVTYKIRPEAQWTD 136 +A+SA+VLPS FRP+PDP P ++W D L+ +A+VT PFT+TY +R +A W+D Sbjct 79 ATSAVSAMVLPSPFRPVPDPAVPGATQWVPDTALVTAAEVTAQEPFTITYTLRNQANWSD 138 Query 137 NAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFAQPYPAWRELFTD 196 APIAA+DF +LWQQM+TQPGVVD A Y LI+ V S GGK V QPYPAWRELF + Sbjct 139 GAPIAAEDFRFLWQQMITQPGVVDSAAYRLISDVSSSGGGKTVTVVLTQPYPAWRELFAN 198 Query 197 ILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIARNDRYWGPPSKPGIIL 256 +LP+H++KD PGGF +GLA +PV+GG F ++++DP RDEIL+ RNDRYWG P+ P IL Sbjct 199 LLPSHLIKDQPGGFVNGLAEGIPVSGGNFSIKSVDPGRDEILLERNDRYWGTPAAPDQIL 258 Query 257 FRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTPRVMQFTLRANVP 316 RR G PA LADS+R GD Q+A VHGG A AQL+AIP VRTA + R +Q L P Sbjct 259 LRRGGTPAQLADSLRTGDAQMALVHGGVATQAQLAAIPSVRTAIMPQSRTLQLVLNGRNP 318 Query 317 KLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGYVPTAPPAMSSAAAL 376 LAD +VR+ +L LLD LLA VGA T V +AQI SPSDPGY PT PP S A Sbjct 319 DLADPRVRRGVLALLDPALLATVGAQTGGWVEPVRAQILSPSDPGYTPTQPPRPSPEEAF 378 Query 377 GLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDGEQLTLVIGVAANDP 436 LL +GF + AP P + + + P +++DG L + IG D Sbjct 379 ALLAEAGF--------ARAPEPPQAVSPTSPAPQPR----PLARDGRSLAVRIGAVVGDA 426 Query 437 TSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIVGWRQAGGNLATLLASR 496 T+ AVA+TAADQLR GI A+V L LY L D VDA+VGW AGG+ AT+LASR Sbjct 427 TAHAVASTAADQLRSAGIDASVRTLTADALYGKELVDGGVDAVVGWEVAGGDPATVLASR 486 Query 497 YGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPRRPSDPGALVKAPSNLT 556 YGCP P+ AP PD R +APSNL+ Sbjct 487 YGCP------------PSGAP----------VPDGEAEAVLEAAR--------RAPSNLS 516 Query 557 GICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVAAGPSVQNVSLS 616 G+CD ++Q IDAAL G ++ V+ EP LW +STVLPI+QD + AAGP V +L+ Sbjct 517 GLCDVALQPAIDAALRGI-DVPKVLADAEPALWGLSTVLPIVQDNLVAAAGPGVDGAALN 575 Query 617 GAVPVGIVGDAGQWVK 632 GA+ VGI GDA W + Sbjct 576 GAIQVGIFGDAAMWRR 591 >gi|333921033|ref|YP_004494614.1| family 5 extracellular solute-binding protein [Amycolicicoccus subflavus DQS3-9A1] gi|333483254|gb|AEF41814.1| Bacterial extracellular solute-binding protein, family 5 [Amycolicicoccus subflavus DQS3-9A1] Length=606 Score = 463 bits (1192), Expect = 3e-128, Method: Compositional matrix adjust. Identities = 283/629 (45%), Positives = 364/629 (58%), Gaps = 45/629 (7%) Query 9 RVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPT-QIIMGIDWIGPGFN 67 R + A A + + CT SPPP +ST T T PP T ++++ ID IG GFN Sbjct 15 RYMPVLAAGSAAVVLAITSCTASPPPPIESTGTVTPTAAPPAEMTNEVVVAIDDIGLGFN 74 Query 68 PHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNH----PFT 123 PHLLS LSPV+ A++ LVLPS FRP+ DP G WE DP+L+VSADV ++ PFT Sbjct 75 PHLLSHLSPVSRAVADLVLPSPFRPVHDPAVAGGVAWEPDPSLIVSADVIDDETGELPFT 134 Query 124 VTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTF 183 V Y +R EAQW+D APIAA+DF YLW+QM TQPGVVDPAGY LI S+ S GGK V F Sbjct 135 VEYVLRNEAQWSDAAPIAAEDFQYLWRQMTTQPGVVDPAGYDLIESITSSSGGKTVNVRF 194 Query 184 AQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIARND 243 +PYPAWRELFT +LPAH++KD PGGF +GL +PV+G +F ++ +D RD+I + RND Sbjct 195 TEPYPAWRELFTYLLPAHLIKDSPGGFDAGLTDTIPVSGSRFHIDRVDRGRDDIRLERND 254 Query 244 RYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVT 303 R+WG P++ I RR G A +AD++R+ D Q+A VHGG A AQLSAI + TAR Sbjct 255 RFWGVPAQLDQIHLRRGGTSAQIADTLRSQDAQIADVHGGGALQAQLSAIAGLETARSYQ 314 Query 304 PRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGYV 363 R +Q L V L VR A+L LD D+LA VG G TV DQAQI PS P YV Sbjct 315 TRSLQLVLNTRVTPLDSADVRTALLSFLDPDVLATVGGGGAATVAPDQAQILPPSSPAYV 374 Query 364 PTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDGE 423 TAP AL L ++G+++ V+R G Sbjct 375 STAPARWRYEDALIALNSAGYEMVDG-----------------------VLREGGIPTGP 411 Query 424 QLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIVGWR 483 LT+VIGV + D + AVANTAADQLR VG+ V + P LY +AL+ VDA+VGW Sbjct 412 ALTIVIGVPSGDEAARAVANTAADQLRQVGVRPRVTQMAPARLYGEALSGGEVDAVVGWV 471 Query 484 QAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPRRPS 543 QAG + AT+LASR+ CP PS + P + R S Sbjct 472 QAGYDPATVLASRWACPPPAPADE----------------APSLDGQESNDPAESDDRTS 515 Query 544 DPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTI 603 + +APSNL+G C + ID+ L G ++I DV+ +E +LW + VLPILQD T+ Sbjct 516 SRD-VARAPSNLSGACVPELAGLIDSVLTGRQDIRDVLPGIESQLWQLGAVLPILQDVTL 574 Query 604 VAAGPSVQNVSLSGAVPVGIVGDAGQWVK 632 +A SV V L VPVG+ A +WV+ Sbjct 575 LAVTDSVAGVQLDVPVPVGVFTSASEWVR 603 >gi|262203219|ref|YP_003274427.1| extracellular solute-binding protein family 5 protein [Gordonia bronchialis DSM 43247] gi|262086566|gb|ACY22534.1| extracellular solute-binding protein family 5 [Gordonia bronchialis DSM 43247] Length=614 Score = 404 bits (1037), Expect = 3e-110, Method: Compositional matrix adjust. Identities = 248/616 (41%), Positives = 327/616 (54%), Gaps = 36/616 (5%) Query 16 ALVALA-CMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGIDWIGPGFNPHLLSDL 74 A+VA+A + L+ CT PPP + T P TP + + D +G GFNPH+ +D Sbjct 31 AVVAVAFSLALSACTADPPPPVRDTG-PLPTPTEYPNAKTVYVATDSVGAGFNPHIAADQ 89 Query 75 SPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPFTVTYKIRPEAQW 134 SPV AI+A+ LPSAF P+ TP G RWE+ + SA+VT+ PFTV Y+I +AQW Sbjct 90 SPVTTAIAAMTLPSAFAPV---QTPDGVRWELQKDFVTSAEVTSQRPFTVIYRIHTDAQW 146 Query 135 TDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFAQPYPAWRELF 194 +D P+ DDF YLWQQM QP VV PAGY LI SVQS EGGK VTFAQPYPAWRELF Sbjct 147 SDGLPVTGDDFSYLWQQMSRQPNVVAPAGYRLIDSVQSREGGKVVNVTFAQPYPAWRELF 206 Query 195 TDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIARNDRYWGPPSKPGI 254 T +LP+H++K P GF +G+ PV+ G F + ID RDE+ +ARNDRYW PS+ Sbjct 207 TGLLPSHVLKGAPAGFQTGMDSGKPVSAGPFAIVGIDTTRDEVRLARNDRYWVTPSRLDQ 266 Query 255 ILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTPRVMQFTLRAN 314 I+ RRAG+ + + DSVR+GD+ V + G AQL+A+P + R ++ R + ++ A Sbjct 267 IVLRRAGSTSQMLDSVRSGDSSVVALGAGPGTQAQLAAVPGLTIQRNLSARSLGISINAR 326 Query 315 VPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGYVPTAPPAMSSAA 374 +A VR+AILGL+D L GAG D +VT + +PSDPGY P P + A Sbjct 327 TTTMASLPVRRAILGLVDPQLTTYAGAG-DWSVTQYANTVFAPSDPGYTPVNRPRPTPAQ 385 Query 375 ALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDGEQLTLVIGVAAN 434 GLL +G++ T P T P KDG L + +G + Sbjct 386 LGGLLAEAGYRKGVPT--------PKGATEDGEIRPLPAGIAPYQKDGRDLVVRVGAVSG 437 Query 435 DPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIVGWRQAGGNLATLLA 494 DP S A A + DQLR GI VL + LY AL RVD +VGW G A LA Sbjct 438 DPRSTAAAASIVDQLRGAGIRGQVLTMPNSELYGTALTRQRVDVVVGWNGLGVPPAASLA 497 Query 495 SRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPRRPSDPGALVKAPSN 554 S+ C P P P +TPP PSD A SN Sbjct 498 SQVDCDQ---------------------PKPGTEPSLSTPPTPTSVAPSDADADNSYASN 536 Query 555 LTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVAAGPSVQNVS 614 ++G+CD + AL+ + + +T EP L + LP+ QD+ + PSV V Sbjct 537 ISGLCDARLIELARQALSQEDPL-ETLTIAEPLLAGAAIYLPLYQDSLVTGTTPSVVGVP 595 Query 615 LSGAVPVGIVGDAGQW 630 +SG + V I G AG W Sbjct 596 VSGPIQVSIFGTAGTW 611 >gi|317506361|ref|ZP_07964172.1| extracellular solute-binding protein, family 5 [Segniliparus rugosus ATCC BAA-974] gi|316255324|gb|EFV14583.1| extracellular solute-binding protein, family 5 [Segniliparus rugosus ATCC BAA-974] Length=571 Score = 396 bits (1018), Expect = 5e-108, Method: Compositional matrix adjust. Identities = 239/626 (39%), Positives = 334/626 (54%), Gaps = 59/626 (9%) Query 5 SPVRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGIDWIGP 64 +P+RR T+G +ALA +GC S ST P + PP PR + G+ Sbjct 2 TPMRRAVRTLGFGLALAVGG-SGCYDSTADGRSSTSAPSAAPPGPRSVVVAVDGVGVGDG 60 Query 65 GFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPFTV 124 GFNPHL +DLS AA+++L LPS FRP+ DP+ P G W MD + L A+V ++ PFTV Sbjct 61 GFNPHLAADLSEATAAVASLTLPSPFRPVADPSAPGGVVWHMDRSFLTVAEVVSHAPFTV 120 Query 125 TYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFA 184 Y++R EAQW+D APIAA+DF YLW+QM TQPGV PAGY LI ++S GGK+ V F Sbjct 121 RYRVRDEAQWSDGAPIAAEDFQYLWRQMTTQPGVAAPAGYGLIDEIRSGSGGKEVTVVFR 180 Query 185 QPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIARNDR 244 YP W+ELF ++LPAH+ +D GGF A + V GG FRVE++D ++E+ + RNDR Sbjct 181 DEYPRWQELFANLLPAHVGRDDLGGFPRAFANGITVAGGSFRVEHMDRNKEEVELVRNDR 240 Query 245 YWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTP 304 YW P+ IL RR G+ LA ++R+ + Q+ VHG ++ AQL A+P VR Sbjct 241 YWDSPAWADKILLRRMGSGTQLAAALRSKEAQLVLVHGSASVLAQLQAVPQVRAEVQAGQ 300 Query 305 RVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGYVP 364 + TL A +L D + R+ +LG+LD LLA +GA Q + P++ P Sbjct 301 AALSITLNARAARLRDVETRRTLLGVLDQGLLARIGA---------QDAVALPAEGAEPP 351 Query 365 TAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDGEQ 424 M A LL+ G+ P + + G P + + KDG+ Sbjct 352 ER--IMPDQAREKLLQ-QGY-------------APLAASLPPGAGAPPI----LGKDGQP 391 Query 425 LTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIVGWRQ 484 T+VIGV ND + AVA+TAADQ R VG+AA+V P LY AL +N+ AIVGW + Sbjct 392 FTMVIGVEQNDSRAFAVASTAADQWRSVGVAASVAQFAPEELYGSALRENKAQAIVGWSE 451 Query 485 AGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPRRPSD 544 AGG+LA L SRYGCP T P D+A+ P Sbjct 452 AGGDLAAELYSRYGCP--DRTDRPGQQG-----------------DSASVDPVG------ 486 Query 545 PGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIV 604 V NL G+C +Q++ AL+G + +++ PRL ++ LP+++D ++ Sbjct 487 ----VGGVRNLAGVCLPDLQADFLRALSGRLSSSELQAEALPRLTALAVELPLMRDAGLL 542 Query 605 AAGPSVQNVSLSGAVPVGIVGDAGQW 630 AAGP + V+ VG + A W Sbjct 543 AAGPGISGVAFGTPSVVGPMAGAASW 568 >gi|296393258|ref|YP_003658142.1| family 5 extracellular solute-binding protein [Segniliparus rotundus DSM 44985] gi|296180405|gb|ADG97311.1| extracellular solute-binding protein family 5 [Segniliparus rotundus DSM 44985] Length=570 Score = 395 bits (1014), Expect = 2e-107, Method: Compositional matrix adjust. Identities = 239/614 (39%), Positives = 326/614 (54%), Gaps = 57/614 (9%) Query 18 VALACMVL-AGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGIDWIGPGFNPHLLSDLSP 76 V L+ ++L +GC+ S P ST T + PP PR + G+ GFNPHL++DLS Sbjct 10 VGLSLVLLGSGCSGSFAPQRSSTTTQSAAPPGPRSVIVAVDGVGVGDGGFNPHLVADLSQ 69 Query 77 VNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPFTVTYKIRPEAQWTD 136 V AA+++L LPS FRP DP+ P G W +D + L +ADV + PFTV Y++R EAQW+D Sbjct 70 VTAAVASLTLPSPFRPAADPSAPGGVAWNLDRSFLAAADVVGHAPFTVRYRVRGEAQWSD 129 Query 137 NAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFAQPYPAWRELFTD 196 APIAA+DF YLW+QM TQPGV D GY LI ++S GGK+ V F YP W+ELF D Sbjct 130 GAPIAAEDFQYLWRQMTTQPGVADAGGYGLIDEIRSGAGGKEVTVVFRDEYPRWKELFAD 189 Query 197 ILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIARNDRYWGPPSKPGIIL 256 +LPAH+ +D GGF + V G FRVE++D ++E+ + RNDRYW P+ IL Sbjct 190 LLPAHVGRDDLGGFPRAFQNGITVAGASFRVEHMDRNKEEVELVRNDRYWDSPAWADKIL 249 Query 257 FRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTPRVMQFTLRANVP 316 RR G+ LA ++RN + Q+ VHG ++ AQL A+P VR + L A Sbjct 250 LRRMGSGTQLAAALRNKEAQLVLVHGSASVLAQLQAVPQVRAEVRAGQAALSLILNARDA 309 Query 317 KLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGYVPTAPPAMSSAAAL 376 +L D + R+A+LG+LD LLA +GA + V L PG V + A Sbjct 310 RLRDQEARQALLGVLDQGLLARIGA--QDAVALP---------PGGVDPPERVLPDQARE 358 Query 377 GLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDGEQLTLVIGVAANDP 436 L++ + T PAP P +I G KDG L + IGVA ND Sbjct 359 KLVQLGYAPLPERTPSGPAPGAP-------------LILG---KDGRPLAMSIGVAQNDA 402 Query 437 TSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIVGWRQAGGNLATLLASR 496 + AVA+TAADQ R +G+AA+V+ L P LY AL DN+V AIVGW AGG+LAT L SR Sbjct 403 RAFAVASTAADQWRSIGVAASVVQLAPEELYGAALRDNKVQAIVGWSAAGGDLATSLYSR 462 Query 497 YGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPRRPSDPGALVKAPSNLT 556 Y CP A + P AP+ P + NL Sbjct 463 YACPD------NPGGASLSDPQAPVDPVG-----------------------LGGVRNLA 493 Query 557 GICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVAAGPSVQNVSLS 616 G+C +Q++ AL+G + D+ V R ++ LP+++D + A GP + V+ Sbjct 494 GVCAPELQTDFLRALSGKFSGADLQAEVIARFTPLAVELPLMRDAGLFAVGPGISGVAFG 553 Query 617 GAVPVGIVGDAGQW 630 G VG + A W Sbjct 554 GPSSVGPMAGAAGW 567 >gi|326381442|ref|ZP_08203136.1| extracellular solute-binding protein family 5 protein [Gordonia neofelifaecis NRRL B-59395] gi|326199689|gb|EGD56869.1| extracellular solute-binding protein family 5 protein [Gordonia neofelifaecis NRRL B-59395] Length=635 Score = 377 bits (967), Expect = 5e-102, Method: Compositional matrix adjust. Identities = 240/644 (38%), Positives = 340/644 (53%), Gaps = 36/644 (5%) Query 9 RVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGIDWIGPGFNP 68 R +T A+V + + C PPP P P TP + + D IG GFNP Sbjct 5 RARITAIAVVGVVGLSATACMADPPP-PVRETLPTHTPNEYPDERTVTVATDTIGAGFNP 63 Query 69 HLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPFTVTYKI 128 HL SD V AI+A+ LPS F P+ NTP G +W M+ LLVSA+VT+ PFTV YKI Sbjct 64 HLGSDQGTVTTAIAAMTLPSPFAPV---NTPDGVQWRMNDALLVSAEVTSYDPFTVEYKI 120 Query 129 RPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFAQPYP 188 +AQW+D P+ DDF YLW+QM QP V+ PAGY I+ VQ+ GGK VTF YP Sbjct 121 VNDAQWSDGLPVTGDDFHYLWEQMSRQPNVIGPAGYRAISDVQTSGGGKVVTVTFNNAYP 180 Query 189 AWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIARNDRYWGP 248 AWRELF ++LP+H ++ P GF G+ + PVT G F + +ID RDE+ + RNDRYW Sbjct 181 AWRELFDNLLPSHTLRSDPTGFQVGMDKGKPVTAGPFSIYSIDRARDEVRLIRNDRYWRK 240 Query 249 PSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTPRVMQ 308 P + ++ R+AG P +A ++RNGD+ +A + G+++ A+L AIP V ++R+ T R + Sbjct 241 PPEVDQVVLRKAGTPQQMAQTIRNGDSTLAALPTGASSAAELGAIPGVVSSRLPTTRALA 300 Query 309 FTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGYVPTAPP 368 + A + QVRKA+LG+LD L+ A AG + VT + +PSDPGY P Sbjct 301 VNVNARSETMRSQQVRKAVLGMLDGRLITAAAAG-ETVVTPFANTVYAPSDPGYTPVDRA 359 Query 369 AMSSAAALGLLEASGFQ---------VDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGR-- 417 S A L +L ++G++ ++ + P + P + G Sbjct 360 RPSEDAVLAMLASAGYRPGVPTPRPAPAAPSASASDTPTPTTPAAPAPADVPGLPYGVAP 419 Query 418 ISKDGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVD 477 I +G L + IG D +++ A T ADQLR G+ A+V+ + LY AL RVD Sbjct 420 IQSNGNDLVVRIGATNTDQRTMSAAETMADQLRSRGVRASVVGMSNTELYGQALTSGRVD 479 Query 478 AIVGWRQAGGNLATLLASRYGCPA------LQATTVP----AANAPTTAPSAPIGPTPSA 527 +VGW GG+ AT LAS+ C A A TV A+ T P++P G A Sbjct 480 LVVGWTGVGGSPATELASQVACQAPPKGTEAGAHTVEPERDKASDETVLPTSPSG----A 535 Query 528 APDTATPPPTAPRRPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPR 587 A TA+ P A D N++G+CD ++ + D+A++ D+ A E Sbjct 536 ATTTASEKPEANVSADD-----SYTGNISGLCDPALIALSDSAMSSEDPTADLQQA-EGL 589 Query 588 LWNMSTVLPILQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWV 631 L + + LPI QDT A + VSL G + +G+ G A +WV Sbjct 590 LADQAVYLPIFQDTMFSAVTDRIVGVSLDGPMQLGVFGGADRWV 633 >gi|296138872|ref|YP_003646115.1| family 5 extracellular solute-binding protein [Tsukamurella paurometabola DSM 20162] gi|296027006|gb|ADG77776.1| extracellular solute-binding protein family 5 [Tsukamurella paurometabola DSM 20162] Length=622 Score = 363 bits (931), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 244/653 (38%), Positives = 343/653 (53%), Gaps = 58/653 (8%) Query 7 VRRVCVTVGALVALACMVLAGCTVSPPPAPQSTDTPRSTPP--PPRRPTQIIMGIDWIGP 64 +RR + + + AL L GC PPPA ++T S PP P I++ ID +G Sbjct 1 MRRRSMGLTVMSALLAATLTGCVADPPPAVPGSET--SAPPQAPVVSGATILVAIDGLGA 58 Query 65 GFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPFTV 124 GFNPHL S+ SP A++++ LPS FR + P+ R E++ + + + P + Sbjct 59 GFNPHLASNSSPAARALASMTLPSVFREVKRPD----GRVELEQNTDLVPTIEHPAPKQI 114 Query 125 TYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFA 184 Y IR +AQW+D APIAA+DF YLW+ M T P V A Y I SVQS GGK+ +VT Sbjct 115 VYTIRQDAQWSDGAPIAAEDFVYLWESMTTAPDTVGSAPYRQIESVQSGAGGKRVIVTLK 174 Query 185 QPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIARNDR 244 P WR LF ++LP+H+VK PGGF + +P +G + V+ +D RDE+ + RNDR Sbjct 175 DDLPGWRTLFQNLLPSHLVKGSPGGFNGAMRDRIPASGAGYLVKKVDVARDEVTLERNDR 234 Query 245 YWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTP 304 YW P++ I+ R+ G+ A LA+SVR GD QV VHGG + AQL++I VR A P Sbjct 235 YWMNPARVERIVLRKGGSDAQLANSVRTGDVQVVAVHGGPSLLAQLTSIYQVRAAEQPAP 294 Query 305 RVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGYVP 364 R + TL P L+D VR+A+L ++VDLL VG+ D TV +AQ+ +PSDPGY P Sbjct 295 RTLSLTLNTRSPFLSDVAVRRALLEAVNVDLLTTVGSSGD-TVRPARAQVLAPSDPGYSP 353 Query 365 TAP----PAMSSAAALGLLEASGFQVD--------------------TNTSVSPAPSVPD 400 T P PA + L A+G+ + T S P Sbjct 354 TMPVPPAPAEAKRRLEQALGAAGYTLQDAPIPPTQSAPPTPAPTPVTPATPAPATSSDPS 413 Query 401 STTTSVSTGPPEVIRGRISKDGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLA 460 + S P + ++ + +DG + L IGV + + AVA+ A DQLR +G+ A+V+ Sbjct 414 ALPVPPSPSPGQNVQQYV-RDGVPMFLRIGVPQGNQEAFAVASNATDQLRSMGVFASVVI 472 Query 461 LDPVTLYHDALNDNRVDAIVGWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAP 520 +P L AL D VDA+VGW LASR CP +++ A P+A Sbjct 473 REPQVLTGTALLDGSVDAVVGWSGLAPTPVERLASRVECPPPPSSSSDA------TPTA- 525 Query 521 IGPTPSAAPDTATPPPTAPRRPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDV 580 TPSA P T DP A V NL G+CD ++Q AL+G + Sbjct 526 ---TPSARPSITT----------DPQA-VTVGGNLAGLCDPALQG---LALDGLRGGPID 568 Query 581 ITAVEPRLWNMSTVLPILQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVKT 633 + A++ LW+ +TVLPILQD T+ A GP+VQ V+L G G+ +W +T Sbjct 569 LGAIDADLWSKATVLPILQDVTLSATGPTVQGVTLDGPPVDGVFTGVDRWERT 621 >gi|343926944|ref|ZP_08766437.1| hypothetical protein GOALK_072_01660 [Gordonia alkanivorans NBRC 16433] gi|343763304|dbj|GAA13363.1| hypothetical protein GOALK_072_01660 [Gordonia alkanivorans NBRC 16433] Length=644 Score = 359 bits (922), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 239/645 (38%), Positives = 333/645 (52%), Gaps = 65/645 (10%) Query 20 LAC-----MVLAGCTVSPPPAPQSTDTPRSTPPPPRRP--TQIIMGIDWIGPGFNPHLLS 72 L+C + L CT PPP + T P P P P + + D +G GFNPH+ + Sbjct 28 LSCGAALLIALTACTADPPPPVRDTGPP---PTPTEYPVAKTVFIATDSVGNGFNPHIAA 84 Query 73 DLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPFTVTYKIRPEA 132 D +PV A++A+ LPSAF P+ TP G WE+ + +A+VT+ PFTVTY+I +A Sbjct 85 DQNPVTTAVAAMTLPSAFSPV---QTPAGPVWELQRHFVTTAEVTSRQPFTVTYRIHTDA 141 Query 133 QWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFAQPYPAWRE 192 QW+D P+ DDF YLWQQM QP VV PAGY LI SVQS EGGK V F +PYPAWRE Sbjct 142 QWSDGLPVTGDDFSYLWQQMSRQPNVVAPAGYRLIDSVQSREGGKLVEVRFERPYPAWRE 201 Query 193 LFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIARNDRYWGPPSKP 252 LFT +LP+H++K P GF +G+ PV+ G + + ID RDE+ +ARNDRYW P + Sbjct 202 LFTGLLPSHVLKGAPAGFQTGMDTGKPVSAGPYAIVGIDKTRDEVRLARNDRYWVTPPRL 261 Query 253 GIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTPRVMQFTLR 312 ++ RRAG A + DSVR+GD+++ + A A+LSA+P + T R +T R + ++ Sbjct 262 DQVVLRRAGNNAQMLDSVRSGDSEIVALGASPATAAELSALPGLETERSLTSRSLGISVN 321 Query 313 ANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGYVPTAPPAMSS 372 A ++ ++R+AILGL+D L GAG D V + +PSDPGY P + Sbjct 322 ARTDAMSSVELRRAILGLVDARLTTFAGAG-DWIVEPYANTVFAPSDPGYTPVSRARPDR 380 Query 373 AAALGLLEASGFQV---DTNTSVSP--------------------APSVPDSTTTSVSTG 409 AA LL +G++ +T SP PS P +T T + Sbjct 381 AAVDALLADAGYRRADPETAGEASPVPEPSTGAPASESPSASGSSTPSTPAATPTPGAVE 440 Query 410 PPEVIRGRI--SKDGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLY 467 ++ G + K+G+ L + +G A DP + + A + DQLR GI A V+ + LY Sbjct 441 VAKLPEGVLPFQKEGQDLLVRVGAVAGDPRATSAAASVVDQLRSAGIRAQVVTMPNSELY 500 Query 468 HDALNDNRVDAIVGWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSA 527 AL RVD +VGW G A LAS+ C P PS Sbjct 501 GSALTQKRVDLVVGWTGLGVPPAASLASQVDCNQ---------------------PKPST 539 Query 528 APDTATPPPTAPRRPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVIT--AVE 585 P ATPP PS SN++G+CD ++ I+ A N + + T E Sbjct 540 EPSPATPPTPTSIAPSGGDVGDSYASNISGLCDPTL---IELARNAMSEDDPISTLEQAE 596 Query 586 PRLWNMSTVLPILQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQW 630 P L + LP+ QD+ IV P V++V L+G + I G A W Sbjct 597 PLLAAQAIYLPLYQDSMIVGVTPEVRDVPLTGPIQESIFGTAVNW 641 >gi|134097602|ref|YP_001103263.1| extracellular solute-binding protein [Saccharopolyspora erythraea NRRL 2338] gi|133910225|emb|CAM00338.1| extracellular solute-binding protein, family 5 [Saccharopolyspora erythraea NRRL 2338] Length=582 Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 219/628 (35%), Positives = 307/628 (49%), Gaps = 99/628 (15%) Query 28 CTVSPPP--APQSTDTPRSTPPPPR-RPTQIIMGIDWIGPGFNPHLLSDLSPVNAAISAL 84 CT +PPP +T P +T + PT++++G+D + GFNPH L+DLSP ++A+S+L Sbjct 25 CTNAPPPPLVEPTTSAPETTSSSGQPMPTEVVVGLDHLEGGFNPHTLADLSPTSSALSSL 84 Query 85 VLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVT-NNHPFTVTYKIRPEAQWTDNAPIAAD 143 +LPS FRP D + ++D TL+ SA+V FTV Y+IR EA W+D APIAA+ Sbjct 85 MLPSVFRPAADGSL------QLDTTLMESAEVVPEAGKFTVRYRIRKEAGWSDGAPIAAE 138 Query 144 DFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFAQPYPAWRELFTDILPAHIV 203 DF YLW+Q+ +QPGV DP GY LI V S + GK VTFA+P+P W+ LF ++LPAH++ Sbjct 139 DFVYLWEQLRSQPGVADPGGYQLIEDVASRQAGKTVEVTFAKPFPGWKTLFNNLLPAHLL 198 Query 204 KDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIARNDRYWGPPSKPGIILFRRAGAP 263 +D P G+A+ L P +GG F + +D R EI++ RN+R+WG P+ I+FR A Sbjct 199 RDAPRGWATALDEGYPASGGPFAIRQVDLDRGEIILERNERWWGTPAVSDRIVFRAADKQ 258 Query 264 AALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTPR--VMQFTLRANVPKLADT 321 LA ++R+GDT +A + L + D R I PR MQ LR + +L+D Sbjct 259 GQLA-ALRSGDTHLAVFGADTETMNALREMGD-RVQLITVPRPATMQLLLRPSSRQLSDV 316 Query 322 QVRKAILGLLDVDLLAAVGAGTDNTVTLD-QAQIRSPSDPGYVPTAPPAM-----SSAAA 375 +VR A+ LD L G G L AQ+ +PS+PGYVPT P A Sbjct 317 RVRNAVAAALDRGALIDAGTGGGPADQLQAHAQVLAPSEPGYVPTEPAGAFPERPDPARV 376 Query 376 LGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDGEQLTLVIGVAAND 435 LL +G+Q + G S+DG L L+I Sbjct 377 DRLLREAGYQR---------------------------VGGVWSRDGRPLNLLIAAPFEH 409 Query 436 PTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDN----------RVDAIVGWRQA 485 V +A TAA QLRD GI ATV L+ + L N VD + R A Sbjct 410 EQYVRIAETAARQLRDQGIQATVTTPTGDQLFGEMLAANPKTEDPGSAVSVDMAIAPRPA 469 Query 486 GGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPRRPSDP 545 GG+ A ++A+ +GCP + APD+ P Sbjct 470 GGDPAAMMAASFGCPGV-------------------------APDSEQP----------- 493 Query 546 GALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVA 605 P N G CD +Q +DAA+ G VEP +WN + +P+ Q ++A Sbjct 494 -----FPYNAAGFCDELLQPTVDAAITGRLPFAAASARVEPAVWNAAVAVPLYQQAQVLA 548 Query 606 AGPSVQNVSLSGAVPVGIVGDAGQWVKT 633 G V+ V G G A QW+ T Sbjct 549 LGRDVRGVQ-PGHGFAGPFSTADQWLGT 575 >gi|256374908|ref|YP_003098568.1| family 5 extracellular solute-binding protein [Actinosynnema mirum DSM 43827] gi|255919211|gb|ACU34722.1| extracellular solute-binding protein family 5 [Actinosynnema mirum DSM 43827] Length=566 Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 213/598 (36%), Positives = 297/598 (50%), Gaps = 89/598 (14%) Query 48 PPRRPTQIIMGIDWIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMD 107 P + ++++G+D + G+NPH L+ S V A+S+L+LPSAFR PD +P+ +D Sbjct 42 PKEKLNEVVVGVDEVKGGYNPHTLAAQSTVTTALSSLLLPSAFRSNPD-GSPS-----LD 95 Query 108 PTLLVSADVTNNHPFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLI 167 TLLV A+VT P+TVTY +R +A W+D APIAA+DF YLWQ+M ++PGVV+PAGY LI Sbjct 96 RTLLVGAEVTGAAPYTVTYTLRRDASWSDAAPIAAEDFVYLWQRMRSEPGVVNPAGYRLI 155 Query 168 TSVQSLEGGKQAVVTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRV 227 + ++S EGGK V FA+PYPAWR+LF D+LPAH++KD PGG++S L + P T G F V Sbjct 156 SDIRSREGGKVVEVVFAEPYPAWRDLFRDLLPAHLLKDAPGGWSSALTESFPATAGPFAV 215 Query 228 ENIDPQRDEILIARNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAA- 286 +D R EI++ R+DRYW P+ ++ RRA A L D++R+GD QVA V S Sbjct 216 RTLDQPRGEIILERSDRYWEQPAALDRVILRRASQSATL-DALRSGDDQVALVRADSITT 274 Query 287 --FAQLSAIPDVRTARIVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGA-GT 343 A+L+ + T + V+Q R P LAD +VR A+ LL+ D L VGA G Sbjct 275 TNLAKLAETTPLTTEAVPRGEVVQVLFRPASPNLADVKVRTAVRALLNRDELIGVGARGG 334 Query 344 DNTVTLDQAQIRSPSDPGYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTT 403 + + PS PGY T P AAAL L +G + PD Sbjct 335 PGAALRADSLVVPPSRPGYRATVPQDGVDAAAL--LTEAGL------------TRPDG-- 378 Query 404 TSVSTGPPEVIRGRISKDGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDP 463 G+ +DG L LVI +AN QL GI + VL P Sbjct 379 ------------GKWGRDGRPLQLVIAAPGGVEPYATIANQVQRQLSLSGIESEVLTTPP 426 Query 464 VTLYHDAL---------NDNRVDAIVGWRQAGGNLATLLASRYGCPALQATTVPAANAPT 514 L+ + L D VD V G+ T+LAS +GCP Sbjct 427 DELFGELLADPGGTGGQGDRTVDIAVVPLVGSGDSGTVLASAFGCP-------------- 472 Query 515 TAPSAPIGPTPSAAPDTATPPPTAPRRPSDPGALVKAPSNLTGICDRSIQSNIDAALNGT 574 P + G+ P N G CD ++Q ++ AL G Sbjct 473 --------------------------EPDNAGSSTTFPGNPAGFCDPAVQKIVEEALTGR 506 Query 575 KNINDVITAVEPRLWNMSTVLPILQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVK 632 ++D + VEP LW + LP+ Q T ++ P Q V+ +GA G + A W + Sbjct 507 LLLSDALAQVEPLLWQQAVSLPLFQVTDLLVVLPQAQGVA-TGAPFAGPLSGAAAWRR 563 >gi|257057085|ref|YP_003134917.1| ABC-type dipeptide transport system, periplasmic component [Saccharomonospora viridis DSM 43017] gi|256586957|gb|ACU98090.1| ABC-type dipeptide transport system, periplasmic component [Saccharomonospora viridis DSM 43017] Length=622 Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 220/648 (34%), Positives = 322/648 (50%), Gaps = 73/648 (11%) Query 16 ALVALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGIDWIGPGFNPHLLSDLS 75 ALV VLA C+ +PPP S+ ++ PP P++I+ +D I G+NPHLL+D+S Sbjct 14 ALVLALVGVLAACSNTPPPPVVSSPVAETSEPPVETPSRIVAMVDDIVGGYNPHLLADVS 73 Query 76 PVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPFTVTYKIRPEAQWT 135 V A+S L+LPS FR + E+D +L+ SA+VT+ PFTVTY+IRP+A W+ Sbjct 74 TVTTALSQLLLPSVFRANEE------GELELDDSLMESAEVTSEDPFTVTYRIRPDASWS 127 Query 136 DNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFAQPYPAWRELFT 195 D APIA +DF YL M TQPGVV+PAGY LI+S++ EGGK VTF++PYP WR LF+ Sbjct 128 DGAPIAVEDFSYLANAMKTQPGVVNPAGYELISSIEPGEGGKLVRVTFSEPYPGWRTLFS 187 Query 196 DILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIARNDRYWGPPSKPGII 255 ++LPAH++KD PGG+ L+ + P GG F ++ ID R EI++ RN+RYW P+ + Sbjct 188 NLLPAHLMKDAPGGWRGALSESFPAYGGPFGIKTIDIARGEIVLERNERYWEKPAAVDRL 247 Query 256 LFRRAGAPAALADSVRNGDTQVA--QVHGGSAA-FAQLSAIPDVRTARIVTPRVMQFTLR 312 + +RA P + ++R+G Q A V+G + A +S D+ + + P V+ LR Sbjct 248 VLQRADGP-GMVSALRSGSAQFALGSVNGDTRKLLADVSE--DIGLSTVAHPYVVDVVLR 304 Query 313 ANVPKLADTQVRKAILGLLDVDLLAAVGA-GTDNTVTLDQAQIRSPSDPGYVPTAPPA-- 369 P L + +VR+A+ LLD D L G G D+ AQ+ PS+PGY T P + Sbjct 305 PIGPALVEDEVRQAVAALLDRDALIDEGTRGGDSADLRAGAQVLPPSEPGYKHTIPGSGP 364 Query 370 ---MSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDGEQLT 426 ++ A LL +G++ + + V +DG L+ Sbjct 365 PLERNAKKAYKLLAEAGYEREAGSWV---------------------------RDGRTLS 397 Query 427 LVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDN------------ 474 LV+ +A A+QL GI V+ L+ AL+ Sbjct 398 LVVASPGQKQPYARIAAKLAEQLIAEGIEVNVVHPPAQELFGSALSATVDLDGGAHGEPA 457 Query 475 ------RVDAIVGWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAA 528 +D V R + AT LAS +GC A T + T P + Sbjct 458 PVNGQVGIDIAVVPRAVSVDPATTLASWFGC---DAGTQDDDSGRTQDPDSGNDDAGKTD 514 Query 529 PDTATPPPTAPRRPSDPGALVKA----PSNLTGICDRSIQSNIDAALNGTKNINDVITAV 584 T PT +PS+ G +A P+N G CD +QS ID+ L G ++ + V Sbjct 515 GKRETAGPTT--KPSESGGAAEAKRVVPTNTAGFCDPELQSVIDSMLTGETSLRQGLAKV 572 Query 585 EPRLWNMSTVLPILQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWVK 632 EP LW+ +P+ Q +A G V V+ +G VG A W + Sbjct 573 EPELWDHMVSIPLFQLADTLAVGSGVSGVT-AGPPLVGPFSSAVNWTR 619 >gi|300789844|ref|YP_003770135.1| oligopeptide/dipeptide ABC transporter periplasmic protein [Amycolatopsis mediterranei U32] gi|299799358|gb|ADJ49733.1| periplasmic substrate-binding component of ABC-type oligopeptide/dipeptide transport system [Amycolatopsis mediterranei U32] gi|340531512|gb|AEK46717.1| oligopeptide/dipeptide ABC transporter periplasmic protein [Amycolatopsis mediterranei S699] Length=578 Score = 286 bits (732), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 201/606 (34%), Positives = 289/606 (48%), Gaps = 95/606 (15%) Query 50 RRPTQIIMGIDWIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPT 109 + P+QI++G+D + G+NPH L+D S V +A+S L+LPS FR D T ++D Sbjct 42 KTPSQIVVGVDDVLGGYNPHNLADSSQVTSALSQLLLPSVFRQKDDGAT------QLDKN 95 Query 110 LLVSADVTNNHPFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITS 169 L+ SA+V + PF V Y+IRP+A W+D APIAA+DF YL Q+ QPGV+ PAGY IT Sbjct 96 LMKSAEVISQQPFVVAYEIRPDASWSDGAPIAAEDFDYLRTQLRDQPGVLGPAGYRQITD 155 Query 170 VQSLEGGKQAVVTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVEN 229 +QS EGGK+ VTFA+PYP W+ LF+D+LPAH++KD P G+ LA P G F +++ Sbjct 156 LQSREGGKRVEVTFAKPYPGWQTLFSDLLPAHLLKDAPDGWRGALASNFPAVAGPFSIKS 215 Query 230 IDPQRDEILIARNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQ 289 +D R E+++ RN+RYW P+ I+ RR+ LA ++R+G+ Q A Sbjct 216 LDTARGEVILERNERYWEKPAAIDRIVLRRSDQNTLLA-ALRSGNDQFALARTTGDELKL 274 Query 290 LSAI-PDVRTARIVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLL--AAVGAGTDNT 346 L + VR + P V LR L D QVR + L+D L V G +T Sbjct 275 LGELGSSVRLHTVARPLVADVLLRPVSATLQDAQVRAGVAALIDRTKLITEGVNGGPSST 334 Query 347 VTLDQAQIRSPSDPGYVPTAPP----AMSSAAALGLLEASGFQVDTNTSVSPAPSVPDST 402 + D AQ+ +PS GY T PP A A A L A+G+ T T+ Sbjct 335 LHAD-AQVTAPSVKGYAATIPPGPPTAPDVAKAEQSLTAAGY---TKTA----------- 379 Query 403 TTSVSTGPPEVIRGRISKDGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALD 462 G K+G L+LVI A +A +L GI + Sbjct 380 -------------GTWRKNGRALSLVIASPATQEPYATIAKELTSELAAQGIEVNAITPQ 426 Query 463 PVTLYH----------------DALNDNRVDAIVGWRQAGGNLATLLASRYGCPALQATT 506 P L+ D+ + +D V + GG+ A++LAS +GC Q Sbjct 427 PRDLFSGLLAMPVVGGVQQPTGDSAGNVGIDIAVVPQAVGGDTASVLASTFGCRPEQT-- 484 Query 507 VPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPRRPSDPGALVKAPSNLTGICDRSIQSN 566 AA T P P N G CD ++Q + Sbjct 485 --AAGVDKTKPVVP--------------------------------GNAAGFCDPALQPS 510 Query 567 IDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVAAGPSVQNVSLSGAVPVGIVGD 626 IDAAL+G+ ++ + +T +EP LW + V+P+ Q +A G + V+ G VG G Sbjct 511 IDAALSGSTSVTEALTTLEPELWRQNVVIPLFQLADTLAIGSGISGVT-PGPPMVGPFGS 569 Query 627 AGQWVK 632 A W + Sbjct 570 AVNWTR 575 >gi|331694865|ref|YP_004331104.1| ABC transporter periplasmic subunit [Pseudonocardia dioxanivorans CB1190] gi|326949554|gb|AEA23251.1| ABC-type transporter, periplasmic subunit [Pseudonocardia dioxanivorans CB1190] Length=634 Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 204/597 (35%), Positives = 281/597 (48%), Gaps = 78/597 (13%) Query 51 RPTQIIMGIDWIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTL 110 PT + +G+ +G GFNPHLLSD SPV A+S LVLPS FRP + ++D T+ Sbjct 50 EPTTVTVGVPSLGAGFNPHLLSDQSPVTTALSTLVLPSVFRPDAE------GTLQLDQTI 103 Query 111 LVSADVTNNHPFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSV 170 SA VT+ PFTV+Y++ +A WT NAPIAA+DF YLW +M ++PG VD AGY LI+ V Sbjct 104 ATSARVTSTDPFTVSYELNVQASWTTNAPIAAEDFVYLWDRMRSEPGTVDAAGYRLISDV 163 Query 171 QSLEGGKQAVVTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENI 230 +S GGK V F+QPYP W++LF+ +LPAHI+KD PG + LA LP +GG FR+ ++ Sbjct 164 RSRAGGKAVDVVFSQPYPQWQQLFSGLLPAHILKDAPGSWTGALANGLPASGGPFRIASV 223 Query 231 DPQRDEILIARNDRYWGPPSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQL 290 D R E+++ RND YW P+ I+ RA + + D +R+GD A L Sbjct 224 DRARGEVVLTRNDLYWASPTTLDRIVL-RAVDDSTMVDELRSGDLDAALPESDPTVSQLL 282 Query 291 SAI-PDVRTARIVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLL---AAVGAGTDNT 346 +A+ P RT + P V R++ LAD +VR+A+ LD + L A GA + Sbjct 283 AALGPAYRTQQAPQPVVTSLAFRSDTGPLADVRVRQAVAATLDREALRTQVAPGAVAADA 342 Query 347 VTLDQAQIRSPSDPGYVPTAPPAMSSAAALG----LLEASGFQVDTNTSVSPAPSVPDST 402 L +PS+PGY TAP + L+ A+G+ D Sbjct 343 FGL------APSEPGYASTAPAGPPARPDPAAAQRLMLAAGYVRDA-------------- 382 Query 403 TTSVSTGPPEVIRGRISKDGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALD 462 +GR G L LVIG AA P V +A A QL GI TV+A Sbjct 383 ------------QGRWGIGGRPLRLVIGAAAERPDDVRLAEAVATQLDAAGIGTTVVAPP 430 Query 463 PVTLY---HDALNDNRVDAIVGWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSA 519 L+ A G T + P TT PA P+T + Sbjct 431 AADLFVQPEVPATPPTTTTPTPSDTASGAPTTAPPTTTRSPGRATTTAPARTVPSTTVPS 490 Query 520 PIGPTPSAAPDTAT--PPPTAP------------------RRPSD-------PGALVKAP 552 + S P T+T PP + P R SD PG Sbjct 491 TTALSGSTGPPTSTTAPPASGPLRADVMVLPRPVGGDVGARYASDYGCPRPVPGGTTAVA 550 Query 553 SNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVAAGPS 609 ++ T C ++QS +D + GT + D VE LW VLP+ Q +V + P+ Sbjct 551 ASPTRFCFPALQSLLDGLVAGTAGV-DTQAVVERVLWAQLPVLPLYQPVGLVVSTPA 606 >gi|302530057|ref|ZP_07282399.1| predicted protein [Streptomyces sp. AA4] gi|302438952|gb|EFL10768.1| predicted protein [Streptomyces sp. AA4] Length=576 Score = 263 bits (672), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 200/627 (32%), Positives = 299/627 (48%), Gaps = 96/627 (15%) Query 28 CTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGIDWIGPGFNPHLLSDLSPVNAAISALVLP 87 C+ +PPP P T P S+ +QI++G+D + G+NPH ++D S + A+S L+LP Sbjct 21 CSNTPPP-PVVTSAPPSSTTSAASLSQIVVGVDDVVGGYNPHSIADASTITTALSQLLLP 79 Query 88 SAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPFTVTYKIRPEAQWTDNAPIAADDFWY 147 S FR D G+R +D TL+VSADV + PFTV Y IRP+A W+D APIA +DF Y Sbjct 80 SVFRQSED-----GTR-TLDKTLMVSADVVSQVPFTVKYVIRPDASWSDGAPIATEDFIY 133 Query 148 LWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFAQPYPAWRELFTDILPAHIVKDIP 207 L M T PGV+DPAGY LI+ ++S +GGK VTF++PYPAW+ LF ++LP H++KD P Sbjct 134 LANAMKTNPGVIDPAGYRLISDIESRDGGKGVEVTFSKPYPAWQTLFDNLLPQHLLKDSP 193 Query 208 GGFASGLARALPVTGGQFRVENIDPQRDEILIARNDRYWGPPSKPGIILFRRAGAPAALA 267 GG+ + LA + P G F ++ ID R E + RNDRYW P+ ++ RR+ A + +A Sbjct 194 GGWTNALATSFPAVAGPFAIKTIDTARGEATLQRNDRYWEKPAAVDTLILRRSDA-SGIA 252 Query 268 DSVRNGDTQVAQVHGGSAAFAQLSAIPD-VRTARIVTPRVMQFTLRANVPKLADTQVRKA 326 ++R+G+ Q + S L+ + V+ + P LR L++ QVR Sbjct 253 TALRSGNDQFSLTRTDSTGLQLLNDLGSAVKLHTVPRPLTASVLLRPVSATLSEPQVRAG 312 Query 327 ILGLLDVDLLAAVGAGTDNTVTLD-QAQIRSPSDPGYVPTAPPAMSSA----AALGLLEA 381 I LLD L + GA + L AQ+ PS Y T P +A A A Sbjct 313 IAALLDRGKLISAGAKGGPSAALKADAQVLPPSAKDYAATIPAGPPAAPDATKAEQYFTA 372 Query 382 SGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDGEQLTLVIGVAANDPTSVAV 441 +G++ + G K + L++V+ ++ Sbjct 373 AGYKKEA---------------------------GVWRKGNKTLSIVLASPGEQEPYASI 405 Query 442 ANTAADQLRDVGIAATVLALDPVTLYHDAL-----NDNR-----------VDAIVGWRQA 485 A A +L GI + P LY L N + VD V + Sbjct 406 AKELASELVAGGIEVNQIKPQPRDLYSSLLAMPVVNGKQQASPDSNSTVGVDIAVVGQPV 465 Query 486 GGNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPRRPSDP 545 GG+ AT+LAS YGC AP+ P P +P Sbjct 466 GGDPATVLASSYGC----------------------------APE---PTPVDKTKPV-- 492 Query 546 GALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVA 605 P+N G+CD+ +Q+ ID+AL G+ + D + +EP+LW+ + V+P+ Q+ +A Sbjct 493 -----VPANPAGLCDQGLQATIDSALTGSATVADSLKTLEPQLWSQNVVIPLFQEAETLA 547 Query 606 AGPSVQNVSLSGAVPVGIVGDAGQWVK 632 G + ++ G G G A W + Sbjct 548 VGKGISGLT-PGPPMQGPFGSAVNWTR 573 >gi|237785226|ref|YP_002905931.1| hypothetical protein ckrop_0625 [Corynebacterium kroppenstedtii DSM 44385] gi|237758138|gb|ACR17388.1| putative secreted protein [Corynebacterium kroppenstedtii DSM 44385] Length=653 Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 185/627 (30%), Positives = 276/627 (45%), Gaps = 104/627 (16%) Query 24 VLAGCTVSPPPAP--QSTDTPRSTPPP-PRRPTQIIMGIDWIGPGFNPHLLSDLSPVNAA 80 +LAGC+ P AP S D ++ ++ +I + + PGFNPHL+SD +P+ Sbjct 14 LLAGCSARPGSAPVVNSGDGNKNNADTVSQQSEKITFAVSDVSPGFNPHLVSDDTPLVDH 73 Query 81 ISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVT----------------------- 117 +++LVLPS F D E++ LL SADV Sbjct 74 MASLVLPSPFVEKDD------GELELNQDLLDSADVVEGSGTGSSASTPSSESTTPSGAA 127 Query 118 NNHPFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGK 177 ++ PFTV Y I +AQW+D PI DF YLW+QM++QPGV DPAGY I+SV S E G Sbjct 128 SSQPFTVRYTIASDAQWSDGTPITGADFEYLWKQMISQPGVEDPAGYEAISSVTSTESGH 187 Query 178 QAVVTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEI 237 Q V F +PY AWR LFT++LP+H+ + F + L ++PV+G +F VE+ID R + Sbjct 188 QVDVHFDRPYVAWRSLFTNLLPSHLYRS-SSNFQTMLRDSVPVSGNRFSVESIDSGRGIV 246 Query 238 LIARNDRYWGPP-SKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDV 296 + RNDRYWG +K I+ + A A+ +RNG Q A + + L ++P Sbjct 247 TLVRNDRYWGSNLAKTDKIVLQAQDNAAEAAEMLRNGQVQGAALRPKATTQLSLDSVPHS 306 Query 297 RTARIVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRS 356 R + +L P + D R IL +D D +A + ++ ++ + Sbjct 307 VVQLSPKNRYLMLSLNTAAPHMDDVGERARILNSVDRDTVARIAG--------ERMEVSA 358 Query 357 PSDPGYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRG 416 P D + SG V + S P+ S P Sbjct 359 PHDEATI------------------SGTSVPGSGSAFPSLSRP----------------- 383 Query 417 RISKDGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRV 476 I V +D +V A T ADQL G A L + + + L Sbjct 384 ----------FRIAVDQSDDAAVTAARTVADQLTQAGFPAKALVMPALDIVESVLPLGLA 433 Query 477 DAIVGWRQAGGNLATLLASRYGCPALQATTVPAANAPTTAPSAPI----------GPTPS 526 DA V W Q+G A+ LAS YGC + P+ + S I P Sbjct 434 DATVAW-QSGDTTASALASHYGCTSADR---PSKEMDSDKSSELIEPESSTPSSPSSEPQ 489 Query 527 AAPDTATPP--PTAPRRPSDPGALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAV 584 D+A P T R S +A +N++G+CD I + + A G ++ND V Sbjct 490 PTSDSAAPSATDTGDARKSMEKKYARA-ANMSGLCDPEIDTQVREAAEGFADVNDTKQKV 548 Query 585 EPRLWNMSTVLPILQDTTIVAAGPSVQ 611 ++ + + L +LQDT + A P+++ Sbjct 549 IEKVNSQAVSLALLQDTEVFATTPALE 575 >gi|319950844|ref|ZP_08024728.1| high affinity substrate binding lipoprotein [Dietzia cinnamea P4] gi|319435499|gb|EFV90735.1| high affinity substrate binding lipoprotein [Dietzia cinnamea P4] Length=621 Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 168/482 (35%), Positives = 223/482 (47%), Gaps = 42/482 (8%) Query 19 ALACMVLAGCTVSPPPAPQSTDTPRSTPPPPRRPTQIIMGIDWIGPGFNPHLLSDLSPVN 78 ALA +V +GC PPP D I++ +D + GFNPHLL+D Sbjct 5 ALALVVASGCVADPPPPTVVGDDRTDGTSVSLTDAGILLALDRVEEGFNPHLLADQGVDT 64 Query 79 AAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPFTVTYKIRPEAQWTDNA 138 +++L+LPSAF P D P +R LL+SA + P T+ Y I +AQW+D Sbjct 65 DLVASLLLPSAFVPGVD-GEPVLNR-----DLLLSAAPLPDAPETIRYTIDQQAQWSDGV 118 Query 139 PIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFAQPYPAWRELFTDIL 198 P+AA+DF YLW+QM QPGVVDPAGY I V+S GGK V F WR LF +L Sbjct 119 PVAAEDFEYLWRQMTGQPGVVDPAGYEQIVDVRSGAGGKVVDVVFESVPAHWRSLFQHML 178 Query 199 PAHIVKDIPGGFASGLARALPV-TGGQFRVENIDPQRDEILIARNDRYWGPPSKPGIILF 257 PAHI+K P GF G ALPV + G F + D R EI RNDRYW + I+ Sbjct 179 PAHILKGAPDGF-QGSMEALPVMSAGPFMIRAADIGRGEIEFVRNDRYWAGAPEIEQIVV 237 Query 258 RRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTPRVMQFTLRANVPK 317 RRA P L ++R+G +A V A +P V + ++ P Sbjct 238 RRATGPGQLGAALRDGPGSMALVSATPVARDVSETVPGVTGTPLAGTAQLELAFNTVAPT 297 Query 318 LADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGYVPTAPPAMSSAAALG 377 +++ VR+A+ LD ++ V G P+ TA PA++ A Sbjct 298 VSEPAVRRAVAAALDPQVIGRVVTGEARPEVTSHP---FPAGSAVTTTADPALTERA--- 351 Query 378 LLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRGRISKDGEQLTLVIGVAANDPT 437 L +GF + TGP R +D L+L +GV A D Sbjct 352 -LTGAGFAL---------------------TGP------RWQRDEVPLSLTLGVEATDDR 383 Query 438 SVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIVGWRQAGGNLATLLASRY 497 +V A + ADQLR GI A V L LY DAL VDA+VGW+ G SR+ Sbjct 384 AVTAAYSVADQLRGAGIGARVWELGSTALYADALPHGLVDAVVGWQSTDGQPELAAVSRF 443 Query 498 GC 499 C Sbjct 444 AC 445 >gi|325002610|ref|ZP_08123722.1| extracellular solute-binding protein [Pseudonocardia sp. P1] Length=622 Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 161/430 (38%), Positives = 216/430 (51%), Gaps = 50/430 (11%) Query 52 PTQIIMGIDWIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLL 111 P++++ GID +G GFNPHL SD S AI+A+ +PS FRP G R ++D T+ Sbjct 46 PSRVVAGIDDLGAGFNPHLRSDQSTATTAIAAMTMPSVFRP-----DAQGVR-QLDRTVA 99 Query 112 VSADVTNNHPFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQ 171 A VT+ PFTV+Y++ EA W+ APIAA+DF YLWQQM +QP + AGY IT V+ Sbjct 100 TDAKVTSQSPFTVSYELNVEAGWSTGAPIAAEDFVYLWQQMRSQPNTIGAAGYREITDVR 159 Query 172 SLEGGKQAVVTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENID 231 S GK V F +PYP W+ELF ++LPAH++KD PGG+ + A P GG FR+ +D Sbjct 160 SRAAGKAVDVVFREPYPHWQELFDNLLPAHLLKDAPGGWTAPFANGTPAAGGPFRLMQVD 219 Query 232 PQRDEILIARNDRYWGPPSKPGIILFRRAGA---PAALADS--------VRNGDTQVAQV 280 R E+L+ RND YW P+ + RR A P AL R TQ V Sbjct 220 RLRGEVLLVRNDPYWDTPAVLDEFVLRRIPADTLPTALESQGIDLALPDARPEITQALDV 279 Query 281 HGGSAAFAQLSAIPDVRTARIVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVG 340 A+ P V++A P V Q R LAD +VR+ I LD + Sbjct 280 ------LARSPEPPTVQSA--PRPSVQQLAFRTQDGPLADPRVREGIAASLDRGAIRE-- 329 Query 341 AGTDNTVTLDQAQIRSPSDPGYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSVPD 400 + ++V +D +PSD GY PTAP A A G P P+V + Sbjct 330 RVSPDSVPVDAFGF-APSDAGYAPTAP-----AGAPG---------------RPDPAVAE 368 Query 401 STTTSVSTGPPEVIRGRISKDGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLA 460 T G GR + G L++VIG A V +A A+QLR GI +TV+A Sbjct 369 RAFT--EAGYVRGADGRWTLGGRPLSIVIGAGAERSEDVEIARVVAEQLRVAGIGSTVVA 426 Query 461 LDPVTLYHDA 470 L +A Sbjct 427 PSATDLLSNA 436 >gi|258654436|ref|YP_003203592.1| family 1 extracellular solute-binding protein [Nakamurella multipartita DSM 44233] gi|258557661|gb|ACV80603.1| extracellular solute-binding protein family 5 [Nakamurella multipartita DSM 44233] Length=603 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 179/607 (30%), Positives = 268/607 (45%), Gaps = 52/607 (8%) Query 17 LVALACMVLAGCT---VSPPPAPQSTDTPRSTPPPPRRPTQIIMGIDWIG---PGFNPHL 70 L LA ++L CT + P AP + STPP P +++G+D GFNP+ Sbjct 16 LFVLAAVLLTACTPPNLPAPIAPTGGSSVSSTPP---APGTLVVGLDGTAGSITGFNPYA 72 Query 71 LSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVSADVTNNHPFTVTYKIRP 130 ++D SP A+++LVLPSAF PD + T + ++ VT+ PFTVTY + Sbjct 73 IADYSPAAQAVASLVLPSAFVMAPDGSIGTAA------DVVDWVAVTSLEPFTVTYLLDR 126 Query 131 EAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSVQSLEGGKQAVVTFAQPYPAW 190 +A W+D PI A+DF YL Q++ QPG V AGY LI++++S + GK V F+QP+P W Sbjct 127 KASWSDGTPITAEDFSYLRDQLLAQPGTVGSAGYRLISAIRSRDAGKTVEVEFSQPFPQW 186 Query 191 RELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENIDPQRDEILIARNDRYWGPPS 250 R LF+ +LP+H++KD PGG++S L LP++ ++R+ + D +I +ARND+YW P Sbjct 187 RTLFSPLLPSHLLKDSPGGWSSALDSDLPLSANRYRMSSYDAVTGQITLARNDKYWATPP 246 Query 251 KPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQ--LSAIPDVRTARIVTPRVMQ 308 P ++ R G P+ L + GD Q A A AQ L +P R + TP +Q Sbjct 247 GPAAVVLR-LGRPSDLLAAFNRGDVQ-ALWFAPDARTAQDLLDQVPADRRTTVATPSSIQ 304 Query 309 FTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTLDQAQIRSPSDPGYVPTAPP 368 L AD VR AI L++D Q+ + G+ P Sbjct 305 LVLNTQRGPTADRSVRTAIAAGLNLD------------------QLSAELTAGWPDGGRP 346 Query 369 AMSSAAALGLLEASGFQVDTNTSVSPAPSVPDSTTTSVSTGPPEVIRG--RISKDGEQLT 426 S A V+ T SP D+ + R +++ GE L Sbjct 347 VASQVA---------LPVEDATDSSPPIVTDDAAAAADDLAAAGYTRNGLYVARQGEVLR 397 Query 427 LVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYHDALNDNRVDAIVGWRQAG 486 L +G + P A A DQL VGI +L L + + +D + G Sbjct 398 LTLGYPSGQPRMAAAARQIRDQLGAVGIEVDLLPDAAPDLIENTVATGDLDLALVNLPRG 457 Query 487 GNLATLLASRYGCPALQATTVPAANAPTTAPSAPIGPTPSAAPDTATPPPTAPRRPSDPG 546 A+ +GCP + + T S + T PT Sbjct 458 PQDDAAAATAFGCPRTDPRGLGSVVTTTPRASGGTTGPTTVPTTEPTTEPTGEAGADGAD 517 Query 547 ALVKAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVAA 606 NL+G C Q + AL G+ + A+ +L VLP++Q + A Sbjct 518 GAAVRTGNLSGYCQAGTQQKLTDALTGSGSAAAADPALWAQL----PVLPVVQPQAVFAV 573 Query 607 GPSVQNV 613 P++Q V Sbjct 574 SPALQPV 580 >gi|340794837|ref|YP_004760300.1| hypothetical protein CVAR_1876 [Corynebacterium variabile DSM 44702] gi|340534747|gb|AEK37227.1| hypothetical protein CVAR_1876 [Corynebacterium variabile DSM 44702] Length=661 Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 189/649 (30%), Positives = 271/649 (42%), Gaps = 103/649 (15%) Query 8 RRVCVTVGALVA--LACMVLAGCTVSPPPAP------------QSTDTPRSTPPPPRRPT 53 RR+ + AL A L VL GC P AP + T+ P + P R Sbjct 8 RRLPAVMAALSAAGLVGAVLVGCQARPSDAPTIAAPQTASTTQEETEEPGTVPDELR--- 64 Query 54 QIIMGIDWIGPGFNPHLLSDLSPVNAAISALVLPSAFRPIPDPNTPTGSRWEMDPTLLVS 113 + +G+D I NPHL+ S + ++ L LPSAF +P + +G+R E + LL S Sbjct 65 TVTVGLDNIPGDLNPHLIGSRSLATSVVAQLTLPSAF-TVP-AGSASGARTERNTDLLES 122 Query 114 ADVTNNH---PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVVDPAGYHLITSV 170 VT P V Y +RP+AQW+D P+ DF YL QQ+ + GVVDP GY +I + Sbjct 123 VKVTEGTEVAPTKVRYVLRPDAQWSDGTPVTGADFDYLHQQITGRSGVVDPGGYAMIDKL 182 Query 171 QSLEGGKQAVVTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALPVTGGQFRVENI 230 GG+ VTF P P WRELF D+LP+HI + F S ++ +GG FRV + Sbjct 183 SVSAGGRTVDVTFTGPDPDWRELFADLLPSHIYRTEDRSFDSMMSGVPAASGGIFRVRGV 242 Query 231 DPQRDEILIARNDRYWGP-PSKPGIILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQ 289 D R EI + RN RYWG P++ I+ +R G Q+ Sbjct 243 DTARGEIRLDRNQRYWGETPARTDSIVLSAVPDSRTATQMLRTGQLQMLLTGEQGVTTES 302 Query 290 LSAIPDVRTARIVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAAVGAGTDNTVTL 349 L+A+P +R + + TL P++A R + LD D LA + L Sbjct 303 LAAVPGLRVREMTRRPDLVMTLNTTAPRMASLTNRTRVTDALDADALARI---------L 353 Query 350 DQAQIRSPSDPGYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPA-PSVPDSTTTSVST 408 Q DP ++A G+ G T SPA P++P Sbjct 354 TQ-------DPS---------ATAPGTGVAADDGETGSTGRDGSPATPALP--------- 388 Query 409 GPPEVIRGRISKDGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATVLALDPVTLYH 468 + GE L IG + D T+V A DQL GIAA + LY Sbjct 389 ----------TVGGELTPLRIGADSRDATAVEAARRVVDQLTAAGIAAEPVIRPSADLYG 438 Query 469 DALNDNRVDAIVGWRQAGGNLATLLASRYGCPALQATTVPAANAPTTA-PSAPIGPTPSA 527 L VDA++ W++ L+ L SRYGC TT + + P+T PS PT + Sbjct 439 SFLPAGEVDAVIAWQETPETLSE-LRSRYGCD----TTDRSVSRPSTGLPSVTAVPTSES 493 Query 528 APD--------------------TATPPPTAPRRPSDPGALVKAPSNLTGICDRSIQSNI 567 T + PT + A N +G+C I I Sbjct 494 QSTEPTETTAATESTESTETLEPTESGEPTESATEGEDAATTGRTVNTSGLCSAEIDGII 553 Query 568 DAALNGTKNIND--VITAVEPRLWNMSTV-------LPILQDTTIVAAG 607 DAAL + +++ V + V+ + +S +P+ D ++AAG Sbjct 554 DAALLSVEGLSEDGVSSLVDATVERVSDAVAEQRIDVPLTGDRRVIAAG 602 >gi|334565094|ref|ZP_08518085.1| putative secreted protein [Corynebacterium bovis DSM 20582] Length=674 Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 145/461 (32%), Positives = 204/461 (45%), Gaps = 68/461 (14%) Query 55 IIMGIDWIGPGFNPHLLSDLSPVNAAISALVLPSAFRPI-------PDPNTPTGSRWE-- 105 + +G+D NPHL+ +SPV A +++L LPSAF P P P T G Sbjct 62 VTVGVDSFAGNLNPHLIGGVSPVTAEVASLTLPSAFIPRQATGAGGPQPVTAAGEEAGDV 121 Query 106 ---MDPTLLVSADVTNNH---PFTVTYKIRPEAQWTDNAPIAADDFWYLWQQMVTQPGVV 159 ++ LL SA VT P V Y+I P+AQW+D PI DF YL MV+ PGV Sbjct 122 DRVLNRDLLTSATVTAGDAAAPTAVRYEITPQAQWSDGTPITGSDFQYLRDMMVSSPGVA 181 Query 160 DPAGYHLITSVQSLEGGKQAVVTFAQPYPAWRELFTDILPAHIVKDIPGGFASGLARALP 219 DP+GY I SV+ GG+ VTF PY W LF D+LP+HI + F + + A+ Sbjct 182 DPSGYERIDSVEVSGGGRTVDVTFRGPYAGWHSLFRDLLPSHIYRSEAKDFQTMMDGAVA 241 Query 220 VTGGQFRVENIDPQRDEILIARNDRYWGP-PSKPGIILFRRAGAPAALADSVRNGDTQVA 278 +GG F+V ++D R I + RNDRYWG P+ + + A A +R G Q+ Sbjct 242 ASGGPFQVHSVDAGRGVIELTRNDRYWGSTPAATDKLALTTVPSAATGAQMLRTGQIQMY 301 Query 279 QVHGGSAAFAQLSAIPDVRTARIVTPRVMQFTLRANVPKLADTQVRKAILGLLDVDLLAA 338 G L+ +P VRT + ++ P +AD R A+ +LD L+A Sbjct 302 LTRPGQTTGRTLAQVPGVRTGEVDRRVMLGLFFNQGSPLVADRDRRAALASVLDPALIAQ 361 Query 339 VGAGTDNTVTLDQAQIRSPSDPGYVPTAPPAMSSAAALGLLEASGFQVDTNTSVSPAPSV 398 + G ++ + PS P VP+ PA +A AP+ Sbjct 362 ITTGRED--------VTVPSRP-EVPSGDPAAVTA---------------EPGAQGAPAR 397 Query 399 PDSTTTSVSTGPPEVIRGRISKDGEQLTLVIGVAANDPTSVAVANTAADQLRDVGIAATV 458 P L I A +D ++V A T D+ G+ ATV Sbjct 398 P---------------------------LRIAAATDDTSAVIAARTVVDEFTTAGVDATV 430 Query 459 LALDPVTLYHDALNDNRVDAIVGWRQAGGNLATLLASRYGC 499 + +DP LY L + VDA+V W Q + A A Y C Sbjct 431 VTVDPADLYGSYLPEGEVDAVVAW-QTTDDTARDYADHYTC 470 Lambda K H 0.316 0.132 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1465214641440 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40