BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1168c
Length=346
Score E
Sequences producing significant alignments: (Bits) Value
gi|15840611|ref|NP_335648.1| PPE family protein [Mycobacterium t... 681 0.0
gi|289744912|ref|ZP_06504290.1| PPE family protein [Mycobacteriu... 678 0.0
gi|294993357|ref|ZP_06799048.1| PPE family protein [Mycobacteriu... 649 0.0
gi|31792362|ref|NP_854855.1| hypothetical protein Mb1201c [Mycob... 310 3e-82
gi|167970138|ref|ZP_02552415.1| PPE family protein [Mycobacteriu... 310 3e-82
gi|240172421|ref|ZP_04751080.1| PPE family protein [Mycobacteriu... 175 1e-41
gi|183980225|ref|YP_001848516.1| PPE family protein, PPE51_2 [My... 147 3e-33
gi|183984212|ref|YP_001852503.1| PPE family protein, PPE18 [Myco... 141 2e-31
gi|289747308|ref|ZP_06506686.1| PPE [Mycobacterium tuberculosis ... 141 2e-31
gi|167967042|ref|ZP_02549319.1| PPE family protein [Mycobacteriu... 139 5e-31
gi|118616708|ref|YP_905040.1| PPE family protein [Mycobacterium ... 139 8e-31
gi|240169037|ref|ZP_04747696.1| PPE family protein [Mycobacteriu... 138 1e-30
gi|183981478|ref|YP_001849769.1| PPE family protein [Mycobacteri... 138 1e-30
gi|289449180|ref|ZP_06438924.1| PPE family protein [Mycobacteriu... 138 1e-30
gi|148824686|ref|YP_001289440.1| PPE family protein [Mycobacteri... 138 1e-30
gi|289445075|ref|ZP_06434819.1| PPE family protein [Mycobacteriu... 137 2e-30
gi|31794652|ref|NP_857145.1| PE family protein [Mycobacterium bo... 137 2e-30
gi|339633481|ref|YP_004725123.1| PE family protein [Mycobacteriu... 137 2e-30
gi|254552580|ref|ZP_05143027.1| PPE family protein [Mycobacteriu... 137 3e-30
gi|306809494|ref|ZP_07446162.1| putative PPE family protein [Myc... 136 5e-30
gi|297636134|ref|ZP_06953914.1| PPE family protein [Mycobacteriu... 136 6e-30
gi|296170357|ref|ZP_06851948.1| PPE family protein [Mycobacteriu... 135 8e-30
gi|31792997|ref|NP_855490.1| PPE family protein [Mycobacterium b... 132 1e-28
gi|57116921|ref|YP_177844.1| PPE family protein [Mycobacterium t... 131 2e-28
gi|294996719|ref|ZP_06802410.1| PPE family protein [Mycobacteriu... 130 3e-28
gi|289446957|ref|ZP_06436701.1| PPE family protein [Mycobacteriu... 130 3e-28
gi|167967397|ref|ZP_02549674.1| PPE family protein [Mycobacteriu... 130 5e-28
gi|308372058|ref|ZP_07427232.2| putative PPE family protein [Myc... 129 5e-28
gi|289569375|ref|ZP_06449602.1| PPE family protein [Mycobacteriu... 129 6e-28
gi|289554847|ref|ZP_06444057.1| PPE family protein [Mycobacteriu... 129 6e-28
gi|294993380|ref|ZP_06799071.1| PPE family protein [Mycobacteriu... 129 7e-28
gi|307084423|ref|ZP_07493536.1| putative PPE family protein [Myc... 128 1e-27
gi|306784092|ref|ZP_07422414.1| PPE family protein [Mycobacteriu... 128 1e-27
gi|340626377|ref|YP_004744829.1| PPE family protein [Mycobacteri... 128 1e-27
gi|118617664|ref|YP_905996.1| PPE family protein [Mycobacterium ... 128 2e-27
gi|240168614|ref|ZP_04747273.1| PPE family protein, PPE51_2 [Myc... 128 2e-27
gi|183981860|ref|YP_001850151.1| PPE family protein [Mycobacteri... 128 2e-27
gi|308231818|ref|ZP_07413879.2| PPE family protein [Mycobacteriu... 127 2e-27
gi|254364253|ref|ZP_04980299.1| PPE family protein [Mycobacteriu... 127 2e-27
gi|121637292|ref|YP_977515.1| PPE family protein [Mycobacterium ... 127 2e-27
gi|253799589|ref|YP_003032590.1| PPE family protein [Mycobacteri... 127 3e-27
gi|333990650|ref|YP_004523264.1| PPE family protein [Mycobacteri... 127 3e-27
gi|297733134|ref|ZP_06962252.1| PPE family protein [Mycobacteriu... 126 4e-27
gi|339294339|gb|AEJ46450.1| PPE family protein [Mycobacterium tu... 125 8e-27
gi|289574028|ref|ZP_06454255.1| PPE family protein [Mycobacteriu... 125 8e-27
gi|57116852|ref|YP_177801.1| PPE family protein [Mycobacterium t... 125 1e-26
gi|240170866|ref|ZP_04749525.1| PPE family protein [Mycobacteriu... 125 1e-26
gi|15841278|ref|NP_336315.1| PPE family protein [Mycobacterium t... 124 2e-26
gi|254550816|ref|ZP_05141263.1| PPE family protein [Mycobacteriu... 124 2e-26
gi|308376701|ref|ZP_07439733.2| PPE family protein [Mycobacteriu... 123 4e-26
>gi|15840611|ref|NP_335648.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|57116836|ref|YP_177791.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148660956|ref|YP_001282479.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
65 more sequence titles
Length=346
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/346 (100%), Positives = 346/346 (100%), Gaps = 0/346 (0%)
Query 1 MDFTIFPPEFNSLNIQGSARPFLVAANAWKNLSNELSYAASRFESEINGLITSWRGPSST 60
MDFTIFPPEFNSLNIQGSARPFLVAANAWKNLSNELSYAASRFESEINGLITSWRGPSST
Sbjct 1 MDFTIFPPEFNSLNIQGSARPFLVAANAWKNLSNELSYAASRFESEINGLITSWRGPSST 60
Query 61 IMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLALATT 120
IMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLALATT
Sbjct 61 IMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLALATT 120
Query 121 NIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPPAPIANPGALARLY 180
NIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPPAPIANPGALARLY
Sbjct 121 NIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPPAPIANPGALARLY 180
Query 181 ELIGSVSETVGSFAAPATKNLPSKLWTLLTKGTYPLTAARISSIPVEYVLAFVEGSNMGQ 240
ELIGSVSETVGSFAAPATKNLPSKLWTLLTKGTYPLTAARISSIPVEYVLAFVEGSNMGQ
Sbjct 181 ELIGSVSETVGSFAAPATKNLPSKLWTLLTKGTYPLTAARISSIPVEYVLAFVEGSNMGQ 240
Query 241 MMGNLAMRSLTPTLKGPLELLPNAVRPAVSATLGNADTIGGLSVPPSWVADKSITPLAKA 300
MMGNLAMRSLTPTLKGPLELLPNAVRPAVSATLGNADTIGGLSVPPSWVADKSITPLAKA
Sbjct 241 MMGNLAMRSLTPTLKGPLELLPNAVRPAVSATLGNADTIGGLSVPPSWVADKSITPLAKA 300
Query 301 VPTSAPGGPSGTSWAQLGLASLAGGAVGAVAARTRSGVILRSPAAG 346
VPTSAPGGPSGTSWAQLGLASLAGGAVGAVAARTRSGVILRSPAAG
Sbjct 301 VPTSAPGGPSGTSWAQLGLASLAGGAVGAVAARTRSGVILRSPAAG 346
>gi|289744912|ref|ZP_06504290.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289757264|ref|ZP_06516642.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|289685440|gb|EFD52928.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289712828|gb|EFD76840.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|326902792|gb|EGE49725.1| PPE family protein [Mycobacterium tuberculosis W-148]
gi|339294159|gb|AEJ46270.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339297800|gb|AEJ49910.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length=346
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/346 (99%), Positives = 345/346 (99%), Gaps = 0/346 (0%)
Query 1 MDFTIFPPEFNSLNIQGSARPFLVAANAWKNLSNELSYAASRFESEINGLITSWRGPSST 60
MDFTIFPPEFNSLNIQGSARPFLVAANAWKNLSNELSYAASRFESEINGLITSWRGPSST
Sbjct 1 MDFTIFPPEFNSLNIQGSARPFLVAANAWKNLSNELSYAASRFESEINGLITSWRGPSST 60
Query 61 IMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLALATT 120
IMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLALATT
Sbjct 61 IMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLALATT 120
Query 121 NIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPPAPIANPGALARLY 180
NIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSP APIANPGALARLY
Sbjct 121 NIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPLAPIANPGALARLY 180
Query 181 ELIGSVSETVGSFAAPATKNLPSKLWTLLTKGTYPLTAARISSIPVEYVLAFVEGSNMGQ 240
ELIGSVSETVGSFAAPATKNLPSKLWTLLTKGTYPLTAARISSIPVEYVLAFVEGSNMGQ
Sbjct 181 ELIGSVSETVGSFAAPATKNLPSKLWTLLTKGTYPLTAARISSIPVEYVLAFVEGSNMGQ 240
Query 241 MMGNLAMRSLTPTLKGPLELLPNAVRPAVSATLGNADTIGGLSVPPSWVADKSITPLAKA 300
MMGNLAMRSLTPTLKGPLELLPNAVRPAVSATLGNADTIGGLSVPPSWVADKSITPLAKA
Sbjct 241 MMGNLAMRSLTPTLKGPLELLPNAVRPAVSATLGNADTIGGLSVPPSWVADKSITPLAKA 300
Query 301 VPTSAPGGPSGTSWAQLGLASLAGGAVGAVAARTRSGVILRSPAAG 346
VPTSAPGGPSGTSWAQLGLASLAGGAVGAVAARTRSGVILRSPAAG
Sbjct 301 VPTSAPGGPSGTSWAQLGLASLAGGAVGAVAARTRSGVILRSPAAG 346
>gi|294993357|ref|ZP_06799048.1| PPE family protein [Mycobacterium tuberculosis 210]
Length=349
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/334 (99%), Positives = 333/334 (99%), Gaps = 0/334 (0%)
Query 13 LNIQGSARPFLVAANAWKNLSNELSYAASRFESEINGLITSWRGPSSTIMAAAVAPFRAW 72
LNIQGSARPFLVAANAWKNLSNELSYAASRFESEINGLITSWRGPSSTIMAAAVAPFRAW
Sbjct 16 LNIQGSARPFLVAANAWKNLSNELSYAASRFESEINGLITSWRGPSSTIMAAAVAPFRAW 75
Query 73 IVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLALATTNIFGIHTPAIFA 132
IVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLALATTNIFGIHTPAIFA
Sbjct 76 IVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLALATTNIFGIHTPAIFA 135
Query 133 LDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPPAPIANPGALARLYELIGSVSETVGS 192
LDALYAQYWSQDGEAMNLYATMAAAAARLTPFSP APIANPGALARLYELIGSVSETVGS
Sbjct 136 LDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPLAPIANPGALARLYELIGSVSETVGS 195
Query 193 FAAPATKNLPSKLWTLLTKGTYPLTAARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP 252
FAAPATKNLPSKLWTLLTKGTYPLTAARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP
Sbjct 196 FAAPATKNLPSKLWTLLTKGTYPLTAARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP 255
Query 253 TLKGPLELLPNAVRPAVSATLGNADTIGGLSVPPSWVADKSITPLAKAVPTSAPGGPSGT 312
TLKGPLELLPNAVRPAVSATLGNADTIGGLSVPPSWVADKSITPLAKAVPTSAPGGPSGT
Sbjct 256 TLKGPLELLPNAVRPAVSATLGNADTIGGLSVPPSWVADKSITPLAKAVPTSAPGGPSGT 315
Query 313 SWAQLGLASLAGGAVGAVAARTRSGVILRSPAAG 346
SWAQLGLASLAGGAVGAVAARTRSGVILRSPAAG
Sbjct 316 SWAQLGLASLAGGAVGAVAARTRSGVILRSPAAG 349
>gi|31792362|ref|NP_854855.1| hypothetical protein Mb1201c [Mycobacterium bovis AF2122/97]
gi|121637100|ref|YP_977323.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|167970139|ref|ZP_02552416.1| PPE Family protein [Mycobacterium tuberculosis H37Ra]
gi|224989573|ref|YP_002644260.1| PPE Family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|31617950|emb|CAD94062.1| PPE FAMILY PROTEIN [FIRST PART] [Mycobacterium bovis AF2122/97]
gi|121492747|emb|CAL71218.1| PPE Family protein [first part] [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224772686|dbj|BAH25492.1| PPE Family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601116|emb|CCC63789.1| PPE Family protein [first part] [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=180
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 169/174 (98%), Positives = 169/174 (98%), Gaps = 0/174 (0%)
Query 1 MDFTIFPPEFNSLNIQGSARPFLVAANAWKNLSNELSYAASRFESEINGLITSWRGPSST 60
MDFTIFPPEFNSLNIQGSARPFLVAANAWKNLSNELSYAASRFESEINGLITSWRGPSST
Sbjct 1 MDFTIFPPEFNSLNIQGSARPFLVAANAWKNLSNELSYAASRFESEINGLITSWRGPSST 60
Query 61 IMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLALATT 120
IMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLALATT
Sbjct 61 IMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLALATT 120
Query 121 NIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPPAPIANPG 174
NIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPP PG
Sbjct 121 NIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPPGADRQPG 174
>gi|167970138|ref|ZP_02552415.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length=161
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 160/161 (99%), Positives = 161/161 (100%), Gaps = 0/161 (0%)
Query 186 VSETVGSFAAPATKNLPSKLWTLLTKGTYPLTAARISSIPVEYVLAFVEGSNMGQMMGNL 245
+SETVGSFAAPATKNLPSKLWTLLTKGTYPLTAARISSIPVEYVLAFVEGSNMGQMMGNL
Sbjct 1 MSETVGSFAAPATKNLPSKLWTLLTKGTYPLTAARISSIPVEYVLAFVEGSNMGQMMGNL 60
Query 246 AMRSLTPTLKGPLELLPNAVRPAVSATLGNADTIGGLSVPPSWVADKSITPLAKAVPTSA 305
AMRSLTPTLKGPLELLPNAVRPAVSATLGNADTIGGLSVPPSWVADKSITPLAKAVPTSA
Sbjct 61 AMRSLTPTLKGPLELLPNAVRPAVSATLGNADTIGGLSVPPSWVADKSITPLAKAVPTSA 120
Query 306 PGGPSGTSWAQLGLASLAGGAVGAVAARTRSGVILRSPAAG 346
PGGPSGTSWAQLGLASLAGGAVGAVAARTRSGVILRSPAAG
Sbjct 121 PGGPSGTSWAQLGLASLAGGAVGAVAARTRSGVILRSPAAG 161
>gi|240172421|ref|ZP_04751080.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=384
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 146/389 (38%), Positives = 196/389 (51%), Gaps = 48/389 (12%)
Query 1 MDFTIFPPEFNSLNIQGS--ARPFLVAANAWKNLSNELSYAASRFESEINGLITSWRGPS 58
MD+ + PPE NS + A AA AW ++ AA + + + L SWRGPS
Sbjct 1 MDYALLPPEVNSGRMWAGPGAGSLHAAAVAWDEMAANFYDAAGTYATMLANLAMSWRGPS 60
Query 59 STIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLALA 118
+T M AA F AW+ +A+ AE H + A AYE AH VPL + TNRL L
Sbjct 61 ATKMTAAATHFVAWLTASAAEAERAGQHARLFAAAYEIAHLMTVPLAEVLTNRLVHHVLV 120
Query 119 TTNIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPPAPIANPGAL-- 176
TN FG +TP I +A Y + W+QD AM YA +AAA+RLTPF+ PAP +PG L
Sbjct 121 ATNFFGQNTPLIMLNEADYGRMWAQDAAAMYAYAEASAAASRLTPFTAPAPTTDPGGLVG 180
Query 177 --------------------ARLYELIGSVSETVGSFAAPATKNLPSKLWTLLTKG---- 212
ARL+EL S + + A+PA SK+WT +T
Sbjct 181 QFAARAVGTAHASGEVLQQVARLHELTPSA---LHALASPAGSGTWSKVWTAITDAASAM 237
Query 213 ----TYPLTAARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTPTLKGPL----ELLP-N 263
+ L +++ P + L+ ++G NMG MM +A ++L G ++P
Sbjct 238 RKTTEWGLLGGKVAFEPTIFSLSVMDGMNMGSMMQKIATKALAKAAMGGAAAATHMMPIT 297
Query 264 AVRPAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVPTSAPGGP-SGTSWAQLGLAS 321
A VSA LG+AD+IG LSVPPSW V +I P A +P + P SGT W Q+ ++S
Sbjct 298 APAHQVSAALGSADSIGRLSVPPSWAVKAPAILPDADLLPGAVAADPDSGTPWVQMAMSS 357
Query 322 LAGGAV----GAVAARTRSGVILRSPAAG 346
LAG V A ARTR I R+PA G
Sbjct 358 LAGTGVARAGAAPMARTR--FIPRTPAGG 384
>gi|183980225|ref|YP_001848516.1| PPE family protein, PPE51_2 [Mycobacterium marinum M]
gi|183173551|gb|ACC38661.1| PPE family protein, PPE51_2 [Mycobacterium marinum M]
Length=381
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 126/341 (37%), Positives = 168/341 (50%), Gaps = 37/341 (10%)
Query 1 MDFTIFPPEFNS-LNIQG-SARPFLVAANAWKNLSNELSYAASRFESEINGLITS-WRGP 57
MDF + PPE NS L G A L AAN+W L+ EL A +ES ++GL + W GP
Sbjct 1 MDFAMLPPEVNSGLMYTGPGAGSLLAAANSWDELAIELGTTAQTYESVLSGLTSMYWAGP 60
Query 58 SSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLAL 117
+S MAA AP+ W+ +TA + A A A+E A+A VP PVI NR+ ++L
Sbjct 61 ASESMAAKAAPYVWWLHSTAEQTQQTATQCRAAAMAFEQAYAMTVPPPVILANRMQLMSL 120
Query 118 ATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPPAPIANPGALA 177
TN FG +T AI AL+A YA+ W QD AM YAT AA AA+L PFS P NP L+
Sbjct 121 VATNFFGQNTAAIAALEAQYAEMWEQDAAAMYGYATSAAMAAQLVPFSSPQQTTNPAGLS 180
Query 178 R-----------------LYELIGSVSETVGSFAAPATKNLPSKLWTLLTKGTYPLTAAR 220
L +LI V + + + A LP L G + A
Sbjct 181 AQSAAVNQADATAAAANPLSDLIALVQKGLAALAGAFPNLLPDDFSIL--DGIFAGYATV 238
Query 221 ISSIPVEYVLAFVEG--SNMGQMMGNLAMR--SLTPTLKGPLELLPNA--VRPAVSA--- 271
S E ++A + G SN+G M+G + L P G +L +A V AVS
Sbjct 239 GVSQDCESIIAGIIGAESNLG-MLGAASENPAELAPGDIGIGSVLSSAPSVGGAVSGPGA 297
Query 272 ---TLGNADTIGGLSVPPSWV--ADKSITPLAKAVPTSAPG 307
++G A +IG LSVP SW A + + L+ A T+ PG
Sbjct 298 VLVSVGRAGSIGQLSVPASWAAPATRQVAALSSAGLTTIPG 338
>gi|183984212|ref|YP_001852503.1| PPE family protein, PPE18 [Mycobacterium marinum M]
gi|183177538|gb|ACC42648.1| PPE family protein, PPE18 [Mycobacterium marinum M]
Length=393
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/344 (35%), Positives = 170/344 (50%), Gaps = 41/344 (11%)
Query 1 MDFTIFPPEFNSLNIQGSARP--FLVAANAWKNLSNELSYAASRFESEINGL-ITSWRGP 57
MDF PPE NS + A LVAA AW +++ +L AAS +S I GL W G
Sbjct 1 MDFGSLPPEINSAKMYAGAGSGSILVAAEAWDSVAVDLYSAASSCQSVIWGLAFGQWVGA 60
Query 58 SSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLAL 117
S+++M AA AP+ AW+ TA+ AEL A+ A AYE+A AA VP +I NRL + L
Sbjct 61 SASLMGAAAAPYVAWLGATATRAELAANQARGAAVAYESAFAATVPPALILENRLQLVTL 120
Query 118 ATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAAR-LTPFSPPAPIANPGAL 176
TNIFG +TPAI +A Y + W+QD AM YA AA A LTPF +AN G L
Sbjct 121 IATNIFGQNTPAIATTEAEYGEMWAQDAAAMYGYAGSAAMLAETLTPFEEAPEVANAGGL 180
Query 177 -------------ARLYELIGSVSETVGSFAAPA-----TKNLPSKLWTLLTKGTYPLTA 218
A +L+ +V + + AAPA T P L +T
Sbjct 181 VNQTAAVGQAIDSAAAGQLMSNVPQALQQLAAPAPQGASTATAPKSLLQSVTSSFSLSNL 240
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTPTLKGPLEL-LPNAVRPAVSAT----- 272
+ I + ++ G+++ + MG+ +++ P+ E + +A R AVS
Sbjct 241 STIVGMENTHLSMANSGASIFKTMGD-SVKGFIPSASKAAETAVEHAARNAVSMVGGGGP 299
Query 273 -----------LGNADTIGGLSVPPSWV-ADKSITPLAKAVPTS 304
+G A ++GGL VP +W A++S+ P A+A+P S
Sbjct 300 AGIGGWAPQGGVGQALSVGGLKVPQAWAEANQSVVPAARALPIS 343
>gi|289747308|ref|ZP_06506686.1| PPE [Mycobacterium tuberculosis 02_1987]
gi|294995751|ref|ZP_06801442.1| PPE family protein [Mycobacterium tuberculosis 210]
gi|289687836|gb|EFD55324.1| PPE [Mycobacterium tuberculosis 02_1987]
gi|326905321|gb|EGE52254.1| PPE family protein [Mycobacterium tuberculosis W-148]
gi|339296295|gb|AEJ48406.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339299898|gb|AEJ52008.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length=393
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 138/398 (35%), Positives = 196/398 (50%), Gaps = 58/398 (14%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGL-ITSWRG 56
+DF PPE NS + GSA + AA W +++++L AAS F+S + GL + SW G
Sbjct 2 VDFGALPPEINSARMYAGPGSAS-LVAAAKMWDSVASDLFSAASAFQSVVWGLTVGSWIG 60
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +MAAA +P+ AW+ TA A+L A + V A AYE A+ VP PVI NR +
Sbjct 61 SSAGLMAAAASPYVAWMSVTAGQAQLTAAQVRVAAAAYETAYGLTVPPPVIAENRTELMT 120
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI A A Y+Q W QD EAM Y AT A A L PF I NPG
Sbjct 121 LTATNLLGQNTPAIEANQAAYSQMWGQDAEAMYGYAATAATATEALLPFEDAPLITNPGG 180
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLPSK----LWTLLTKGTYPLTA 218
L A +L+ +V + + A PA +PS LWT ++ PL+
Sbjct 181 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPAQGVVPSSKLGGLWTAVSPHLSPLS- 239
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP-TLKGPLELLPNAV------------ 265
+SSI ++ G +M + ++ ++ L P + N V
Sbjct 240 -NVSSIANNHMSMMGTGVSMTNTLHSM-LKGLAPAAAQAVETAAENGVWAMSSLGSQLGS 297
Query 266 -------RPAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP--------TSAPGGP 309
V+A LG A ++G LSVPP+W A++++TP A+A+P +APG
Sbjct 298 SLGSSGLGAGVAANLGRAASVGSLSVPPAWAAANQAVTPAARALPLTSLTSAAQTAPGHM 357
Query 310 SGTSWAQLGLASLAGGAV-GAVAARTRSGVILRSPAAG 346
G LG + AG + A+ R+ ILR+PAAG
Sbjct 358 LGG--LPLGHSVNAGSGINNALRVPARAYAILRTPAAG 393
>gi|167967042|ref|ZP_02549319.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|254366827|ref|ZP_04982868.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|289555745|ref|ZP_06444955.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|298526959|ref|ZP_07014368.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
gi|134152336|gb|EBA44381.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|289440377|gb|EFD22870.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|298496753|gb|EFI32047.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
Length=392
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 138/398 (35%), Positives = 195/398 (49%), Gaps = 58/398 (14%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGL-ITSWRG 56
MDF PPE NS + GSA + AA W +++++L AAS F+S + GL + SW G
Sbjct 1 MDFGALPPEINSARMYAGPGSAS-LVAAAKMWDSVASDLFSAASAFQSVVWGLTVGSWIG 59
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +MAAA +P+ AW+ TA A+L A + V A AYE A+ VP PVI NR +
Sbjct 60 SSAGLMAAAASPYVAWMSVTAGQAQLTAAQVRVAAAAYETAYRLTVPPPVIAENRTELMT 119
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI A A Y+Q W QD EAM Y AT A A L PF I NPG
Sbjct 120 LTATNLLGQNTPAIEANQAAYSQMWGQDAEAMYGYAATAATATEALLPFEDAPLITNPGG 179
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLPSK----LWTLLTKGTYPLTA 218
L A +L+ +V + + A PA +PS LWT ++ PL+
Sbjct 180 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPAQGVVPSSKLGGLWTAVSPHLSPLS- 238
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP-TLKGPLELLPNAV------------ 265
+SSI ++ G +M + ++ ++ L P + N V
Sbjct 239 -NVSSIANNHMSMMGTGVSMTNTLHSM-LKGLAPAAAQAVETAAENGVWAMSSLGSQLGS 296
Query 266 -------RPAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP--------TSAPGGP 309
V+A LG A ++G LSVPP+W A++++TP A+A+P +APG
Sbjct 297 SLGSSGLGAGVAANLGRAASVGSLSVPPAWAAANQAVTPAARALPLTSLTSAAQTAPGHM 356
Query 310 SGTSWAQLGLASLAGGAV-GAVAARTRSGVILRSPAAG 346
G LG + AG + A+ R+ I R+PAAG
Sbjct 357 LGG--LPLGHSVNAGSGINNALRVPARAYAIPRTPAAG 392
>gi|118616708|ref|YP_905040.1| PPE family protein [Mycobacterium ulcerans Agy99]
gi|118568818|gb|ABL03569.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=393
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 117/344 (35%), Positives = 170/344 (50%), Gaps = 41/344 (11%)
Query 1 MDFTIFPPEFNSLNIQGSARP--FLVAANAWKNLSNELSYAASRFESEINGL-ITSWRGP 57
MDF PPEFNS + A LVAA AW +++ +L AAS +S I GL W G
Sbjct 1 MDFGSLPPEFNSGKMYAGAGSGSILVAAEAWDSVAVDLYSAASSCQSVIWGLAFGQWVGA 60
Query 58 SSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLAL 117
S+++M AA AP+ AW+ TA+ AEL A+ A AYE+A AA VP +I NRL + L
Sbjct 61 SASLMGAAAAPYVAWLGATATQAELAANQARGAAVAYESAFAATVPPALILENRLQLVTL 120
Query 118 ATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAAR-LTPFSPPAPIANPGAL 176
TNIFG +TPAI +A Y + W+QD AM YA AA A LTPF +AN G L
Sbjct 121 IATNIFGQNTPAIATTEAEYGEMWAQDAAAMYGYAGSAAMLAETLTPFEEAPEVANAGGL 180
Query 177 ARLY-------------ELIGSVSETVGSFAAPA-----TKNLPSKLWTLLTKGTYPLTA 218
+ +L+ +V + + AA A T P L +T
Sbjct 181 VKQTAAVGQAIDSAAAGQLMSNVPQALQQLAATAPQGASTATAPKSLLQSVTSSFSSSNL 240
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTPTLKGPLEL-LPNAVRPAVS------- 270
+ I + ++ G+++ + MG+ +++ P+ E + +A R AVS
Sbjct 241 STIVGMENTHLSMANSGASILKTMGD-SVKGFIPSASKAAETAVEHAARNAVSMVGGGGP 299
Query 271 ---------ATLGNADTIGGLSVPPSWV-ADKSITPLAKAVPTS 304
+G A ++GGL VP +W A++++ P A+A+P S
Sbjct 300 AGIGGWAPQGGVGQALSVGGLKVPQAWAEANQAVVPAARALPIS 343
>gi|240169037|ref|ZP_04747696.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=391
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 134/395 (34%), Positives = 187/395 (48%), Gaps = 53/395 (13%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGLITS-WRG 56
MDF PPE NS + GS L AA W ++ +L AAS +S I GL+ WRG
Sbjct 1 MDFGALPPEINSARMYTGPGSGS-LLAAAQVWDGVAIDLYNAASAVQSVIWGLLVGPWRG 59
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +M AA +P+ W+ TTA+ AEL AD + A AYEAA A VP VI NR+ L
Sbjct 60 TSAGLMVAAASPYVTWLGTTAAQAELTADQVRTAATAYEAAFATTVPPAVIAGNRIQLLT 119
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAAR-LTPFSPPAPIANPGA 175
L +N+FG +TPAI +A Y + W+QD AM YA AA AA LTPF I N G
Sbjct 120 LIASNLFGQNTPAIAVTEADYGEMWAQDAAAMYGYAGSAAVAAETLTPFDESPEITNAGG 179
Query 176 LARL-------------YELIGSVSETVGSFAAPATKNLP----SKLWTLLTKGTYPLTA 218
L + +LI +V + + A P P +LW ++ P++
Sbjct 180 LVQQAGAVEEATDTAAANQLISTVPQALQQLAEPGQGTTPFTAVGELWKAISPHLSPIS- 238
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTPTLKGPLE-LLPNAVR----------- 266
I S+ +V G +M +L ++ + P +E + + R
Sbjct 239 -NIVSMLNNHVSMLSSGMSMTNTASSL-LKGMAPAAAQAVESAVESGARAMGSLGSGLGT 296
Query 267 -----PAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP-----TSAPGGPS----G 311
V+A LG A +IG LSVP W A++++ P A+A+P T+A GP+ G
Sbjct 297 SGIGGSGVAAGLGRALSIGSLSVPHGWAAANQTVVPAARALPLAGVATAAETGPAPMLGG 356
Query 312 TSWAQLGLASLAGGAVGAVAARTRSGVILRSPAAG 346
QL A G G + R V+ R+PAAG
Sbjct 357 LPLGQLANAGGGNGVSGVLRVTPRPYVMPRTPAAG 391
>gi|183981478|ref|YP_001849769.1| PPE family protein [Mycobacterium marinum M]
gi|183174804|gb|ACC39914.1| PPE family protein [Mycobacterium marinum M]
Length=427
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 135/388 (35%), Positives = 180/388 (47%), Gaps = 61/388 (15%)
Query 1 MDFTIFPPEFNS--LNIQGSARPFLVAANAWKNLSNELSYAASRFESEINGLIT-SWRGP 57
MDF PPE NS + + + P L AA W L+ EL A+ + S ++GL SWRGP
Sbjct 1 MDFGALPPEINSGRMYVGPGSGPMLAAAVVWDELAAELYATAAGYRSTLDGLTGGSWRGP 60
Query 58 SSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLAL 117
+S MAAA AP+ AW+ TA+ AEL V A AYE A AA VP PVI NR + L
Sbjct 61 ASASMAAAAAPYVAWMTATAAQAELAGSQAKVAASAYETAFAATVPPPVIAANRALLMGL 120
Query 118 ATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPPAPIANP-GAL 176
TNIFG +TPAI A +A YA+ W+QD AM YA +A A ++TPF+ P I +P GA+
Sbjct 121 VFTNIFGQNTPAIAATEAHYAEMWAQDAAAMYAYAGSSATATQVTPFTEPPQITSPSGAV 180
Query 177 -------------------ARLYELIGSVSETVGSFA-----APATKNLPS--------- 203
A+L LI V + A A A LP
Sbjct 181 SQAAAVTEAATASASSDITAQLSPLIAVVPNALQGMATSGNPAAAIAGLPDVALPAGIIT 240
Query 204 ---KLWTLLTKGTYPLTAARISSIPVEYVLAFVEGSNMGQ-MMGNLAMRS-LTPTLKG-- 256
T+L P T ++ +P LAF + Q M+G A S P + G
Sbjct 241 DLQNFTTILDTLDGPFTIQGLTGVPGGPFLAFGQVYAFSQNMVGAQAFFSPAEPVIGGLA 300
Query 257 PLELLPN----------AVRPAVSATLGNADTIGGLSVPPSWVADK-SITPLAKAVPTSA 305
PL N +V S +G+A +G +SVP W + +I +PTS
Sbjct 301 PLAGEANLGAAGVVGGPSVGGQASGAMGHAALVGNMSVPQGWTQEAPAIRVFVSELPTSV 360
Query 306 PGGPSGT------SWAQLGLASLAGGAV 327
P+ T + Q+ L+SLAG A+
Sbjct 361 TAAPAATLAGESAVFNQMALSSLAGRAL 388
>gi|289449180|ref|ZP_06438924.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|340628446|ref|YP_004746898.1| PE family protein [Mycobacterium canettii CIPT 140010059]
gi|289422138|gb|EFD19339.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|340006636|emb|CCC45823.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=393
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 138/398 (35%), Positives = 195/398 (49%), Gaps = 58/398 (14%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGLIT-SWRG 56
+DF PPE NS + GSA + AA W +++++L AAS F+S + GL T SW G
Sbjct 2 VDFGALPPEINSARMYAGPGSAS-LVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIG 60
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +MAAA +P+ AW+ TA A+L A + V A AYE A+ VP PVI NR +
Sbjct 61 SSAGLMAAAASPYVAWMSVTAGQAQLTAAQVRVAAAAYETAYRLTVPPPVIAENRTELMT 120
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI A A Y+Q W QD EAM Y AT A A L PF I NPG
Sbjct 121 LTATNLLGQNTPAIEANQAAYSQMWGQDAEAMYGYAATAATATEALLPFEDAPLITNPGG 180
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLPSK----LWTLLTKGTYPLTA 218
L A +L+ +V + + A PA +PS LWT ++ PL+
Sbjct 181 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPAQGVVPSSKLGGLWTAVSPHLSPLS- 239
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP-TLKGPLELLPNAV------------ 265
+SSI ++ G +M + ++ ++ L P + N V
Sbjct 240 -NVSSIANNHMSMMGTGVSMTNTLHSM-LKGLAPAAAQAVETAAENGVWAMSSLGSQLGS 297
Query 266 -------RPAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP--------TSAPGGP 309
V+A LG A ++G LSVPP+W A++++TP A+A+P +APG
Sbjct 298 SLGSSGLGAGVAANLGRAASVGSLSVPPAWAAANQAVTPAARALPLTSLTSAAQTAPGHM 357
Query 310 SGTSWAQLGLASLAGGAV-GAVAARTRSGVILRSPAAG 346
G LG + AG + A+ R+ I R+PAAG
Sbjct 358 LGG--LPLGHSVNAGSGINNALRVPARAYAIPRTPAAG 393
>gi|148824686|ref|YP_001289440.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|148723213|gb|ABR07838.1| PPE family protein [Mycobacterium tuberculosis F11]
Length=392
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 137/398 (35%), Positives = 194/398 (49%), Gaps = 58/398 (14%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGL-ITSWRG 56
MDF PPE NS + GSA + AA W +++++L AAS F+S + GL + SW G
Sbjct 1 MDFGALPPEINSARMYAGPGSAS-LVAAAKMWDSVASDLFSAASAFQSVVWGLTVGSWIG 59
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +M AA +P+ AW+ TA A+L A + V A AYE A+ VP PVI NR +
Sbjct 60 SSAGLMVAAASPYVAWMSVTAGQAQLTAAQVRVAAAAYETAYRLTVPPPVIAENRTELMT 119
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI A A Y+Q W QD EAM Y AT A A L PF I NPG
Sbjct 120 LTATNLLGQNTPAIEANQAAYSQMWGQDAEAMYGYAATAATATEALLPFEDAPLITNPGG 179
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLPSK----LWTLLTKGTYPLTA 218
L A +L+ +V + + A PA +PS LWT ++ PL+
Sbjct 180 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPAQGVVPSSKLGGLWTAVSPHLSPLS- 238
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP-TLKGPLELLPNAV------------ 265
+SSI ++ G +M + ++ ++ L P + N V
Sbjct 239 -NVSSIANNHMSMMGTGVSMTNTLHSM-LKGLAPAAAQAVETAAENGVWAMSSLGSQLGS 296
Query 266 -------RPAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP--------TSAPGGP 309
V+A LG A ++G LSVPP+W A++++TP A+A+P +APG
Sbjct 297 SLGSSGLGAGVAANLGRAASVGSLSVPPAWAAANQAVTPAARALPLTSLTSAAQTAPGHM 356
Query 310 SGTSWAQLGLASLAGGAV-GAVAARTRSGVILRSPAAG 346
G LG + AG + A+ R+ I R+PAAG
Sbjct 357 LGG--LPLGHSVNAGSGINNALRVPARAYAIPRTPAAG 392
>gi|289445075|ref|ZP_06434819.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289571709|ref|ZP_06451936.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289755609|ref|ZP_06514987.1| PPE family protein [Mycobacterium tuberculosis EAS054]
gi|289417994|gb|EFD15234.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289545463|gb|EFD49111.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289696196|gb|EFD63625.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length=390
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 143/406 (36%), Positives = 196/406 (49%), Gaps = 77/406 (18%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGL-ITSWRG 56
+DF PPE NS + GSA + AA W +++++L AAS F+S + GL + SW G
Sbjct 2 VDFGALPPEINSARMYAGPGSAS-LVAAAKMWDSVASDLFSAASAFQSVVWGLTVGSWIG 60
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +MAAA +P+ AW+ TA A+L A + V A AYE A+ VP PVI NR +
Sbjct 61 SSAGLMAAAASPYVAWMSVTAGQAQLTAAQVRVAAAAYETAYRLTVPPPVIAENRTELMT 120
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI A A Y+Q W QD EAM Y AT A A L PF I NPG
Sbjct 121 LTATNLLGQNTPAIEANQAAYSQMWGQDAEAMYGYAATAATATEALLPFEDAPLITNPGG 180
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLPSK----LWTLLTKGTYPLTA 218
L A +L+ +V + + A PA +PS LWT ++ PL+
Sbjct 181 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPAQGVVPSSKLGGLWTAVSPHLSPLS- 239
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTPTLKGPLELL-------------PNAV 265
+SSI +N MMG S+T TL L+ L N V
Sbjct 240 -NVSSI----------ANNHMSMMGTGV--SMTNTLHSMLKGLAPAAAAQAVQTAAQNGV 286
Query 266 R---------------PAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP------- 302
+ V+A LG A ++G LSVPP+W A++++TP A+A+P
Sbjct 287 QAMSSLGSSLGSSGLGAGVAANLGRAASVGSLSVPPAWAAANQAVTPAARALPLTSLTSA 346
Query 303 -TSAPGGPSGTSWAQLGLASLAGGAV-GAVAARTRSGVILRSPAAG 346
+APG G LG + AG + A+ R+ I R+PAAG
Sbjct 347 AQTAPGHMLGG--LPLGHSVNAGSGINNALRVPARAYAIPRTPAAG 390
>gi|31794652|ref|NP_857145.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57117111|ref|YP_177976.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|121639396|ref|YP_979620.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
36 more sequence titles
Length=393
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 137/398 (35%), Positives = 195/398 (49%), Gaps = 58/398 (14%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGL-ITSWRG 56
+DF PPE NS + GSA + AA W +++++L AAS F+S + GL + SW G
Sbjct 2 VDFGALPPEINSARMYAGPGSAS-LVAAAKMWDSVASDLFSAASAFQSVVWGLTVGSWIG 60
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +MAAA +P+ AW+ TA A+L A + V A AYE A+ VP PVI NR +
Sbjct 61 SSAGLMAAAASPYVAWMSVTAGQAQLTAAQVRVAAAAYETAYRLTVPPPVIAENRTELMT 120
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI A A Y+Q W QD EAM Y AT A A L PF I NPG
Sbjct 121 LTATNLLGQNTPAIEANQAAYSQMWGQDAEAMYGYAATAATATEALLPFEDAPLITNPGG 180
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLPSK----LWTLLTKGTYPLTA 218
L A +L+ +V + + A PA +PS LWT ++ PL+
Sbjct 181 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPAQGVVPSSKLGGLWTAVSPHLSPLS- 239
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP-TLKGPLELLPNAV------------ 265
+SSI ++ G +M + ++ ++ L P + N V
Sbjct 240 -NVSSIANNHMSMMGTGVSMTNTLHSM-LKGLAPAAAQAVETAAENGVWAMSSLGSQLGS 297
Query 266 -------RPAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP--------TSAPGGP 309
V+A LG A ++G LSVPP+W A++++TP A+A+P +APG
Sbjct 298 SLGSSGLGAGVAANLGRAASVGSLSVPPAWAAANQAVTPAARALPLTSLTSAAQTAPGHM 357
Query 310 SGTSWAQLGLASLAGGAV-GAVAARTRSGVILRSPAAG 346
G LG + AG + A+ R+ I R+PAAG
Sbjct 358 LGG--LPLGHSVNAGSGINNALRVPARAYAIPRTPAAG 393
>gi|339633481|ref|YP_004725123.1| PE family protein [Mycobacterium africanum GM041182]
gi|339332837|emb|CCC28560.1| PE family protein [Mycobacterium africanum GM041182]
Length=393
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 137/398 (35%), Positives = 195/398 (49%), Gaps = 58/398 (14%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGL-ITSWRG 56
+DF PPE NS + GSA + AA W +++++L AAS F+S + GL + SW G
Sbjct 2 VDFGALPPEINSARMYAGPGSAS-LVAAAKMWDSVASDLFSAASAFQSVVWGLTVGSWIG 60
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +MAAA +P+ AW+ TA A+L A + V A AYE A+ VP PVI NR +
Sbjct 61 SSAGLMAAAASPYVAWMSVTAGQAQLTAARVRVAAAAYETAYRLTVPPPVIAENRTEVMT 120
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI A A Y+Q W QD EAM Y AT A A L PF I NPG
Sbjct 121 LTATNLLGQNTPAIEANQAAYSQMWGQDAEAMYGYAATAATATEALLPFEDAPLITNPGG 180
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLPSK----LWTLLTKGTYPLTA 218
L A +L+ +V + + A PA +PS LWT ++ PL+
Sbjct 181 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPAQGVVPSSKLGGLWTAVSPHLSPLS- 239
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP-TLKGPLELLPNAV------------ 265
+SSI ++ G +M + ++ ++ L P + N V
Sbjct 240 -NVSSIANNHMSMMGTGVSMTNTLHSM-LKGLAPAAAQAVETAAENGVWAMSSLGSQLGS 297
Query 266 -------RPAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP--------TSAPGGP 309
V+A LG A ++G LSVPP+W A++++TP A+A+P +APG
Sbjct 298 SLGSSGLGAGVAANLGRAASVGSLSVPPAWAAANQAVTPAARALPLTSLTSAAQTAPGHM 357
Query 310 SGTSWAQLGLASLAGGAV-GAVAARTRSGVILRSPAAG 346
G LG + AG + A+ R+ I R+PAAG
Sbjct 358 LGG--LPLGHSVNAGSGINNALRVPARAYAIPRTPAAG 393
>gi|254552580|ref|ZP_05143027.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=393
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 138/398 (35%), Positives = 195/398 (49%), Gaps = 58/398 (14%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGL-ITSWRG 56
+DF PPE NS + GSA + AA W +++++L AAS F+S + GL + SW G
Sbjct 2 VDFGALPPEINSARMYAGPGSAS-LVAAAKMWDSVASDLFSAASAFQSVVWGLTVGSWIG 60
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +MAAA +P+ AW+ TA A+L A + V A AYE A+ VP PVI NR +
Sbjct 61 SSAGLMAAAASPYVAWMSVTAGQAQLTAAQVRVAAAAYETAYRLTVPPPVIAENRTELMT 120
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI A A Y+Q W QD EAM Y AT A A L PF I NPG
Sbjct 121 LTATNLLGQNTPAIEANQAAYSQMWGQDAEAMYGYAATAATATEALLPFEDAPLITNPGG 180
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLPSK----LWTLLTKGTYPLTA 218
L A +L+ +V + + A PA +PS LWT ++ PL+
Sbjct 181 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPAQGVVPSSKLGGLWTAVSPHLSPLS- 239
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP-TLKGPLELLPNAV------------ 265
+SSI ++ G +M + ++ ++ L P + N V
Sbjct 240 -NVSSIANNHMSMMGTGVSMTNTLHSM-LKGLAPAAAQAVETAAENGVWAMSSLGSQLGS 297
Query 266 -------RPAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP--------TSAPGGP 309
V+A LG A ++G LSVPP+W A++++TP A+A+P +APG
Sbjct 298 SLGSSGLGAGVAANLGRAASVGSLSVPPAWAAANQAVTPAARALPLTSLTSAAQTAPGHM 357
Query 310 SGTSWAQLGLASLAG-GAVGAVAARTRSGVILRSPAAG 346
G LG + AG G A+ R+ I R+PAAG
Sbjct 358 LGG--LPLGHSVNAGRGINNALRVPARAYAIPRTPAAG 393
>gi|306809494|ref|ZP_07446162.1| putative PPE family protein [Mycobacterium tuberculosis SUMu007]
gi|308344226|gb|EFP33077.1| putative PPE family protein [Mycobacterium tuberculosis SUMu007]
Length=361
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 121/345 (36%), Positives = 173/345 (51%), Gaps = 47/345 (13%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGL-ITSWRG 56
+DF PPE NS + GSA + AA W +++++L AAS F+S + GL + SW G
Sbjct 2 VDFGALPPEINSARMYAGPGSAS-LVAAAKMWDSVASDLFSAASAFQSVVWGLTVGSWIG 60
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +MAAA +P+ AW+ TA A+L A + V A AYE A+ VP PVI NR +
Sbjct 61 SSAGLMAAAASPYVAWMSVTAGQAQLTAAQVRVAAAAYETAYRLTVPPPVIAENRTELMT 120
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI A A Y+Q W QD EAM Y AT A A L PF I NPG
Sbjct 121 LTATNLLGQNTPAIEANQAAYSQMWGQDAEAMYGYAATAATATEALLPFEDAPLITNPGG 180
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLPSK----LWTLLTKGTYPLTA 218
L A +L+ +V + + A PA +PS LWT ++ PL+
Sbjct 181 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPAQGVVPSSKLGGLWTAVSPHLSPLS- 239
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP-TLKGPLELLPNAV------------ 265
+SSI ++ G +M + ++ ++ L P + N V
Sbjct 240 -NVSSIANNHMSMMGTGVSMTNTLHSM-LKGLAPAAAQAVETAAENGVWAMSSLGSQLGS 297
Query 266 -------RPAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP 302
V+A LG A ++G LSVPP+W A++++TP A+A+P
Sbjct 298 SLGSSGLGAGVAANLGRAASVGSLSVPPAWAAANQAVTPAARALP 342
>gi|297636134|ref|ZP_06953914.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
Length=393
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 136/398 (35%), Positives = 194/398 (49%), Gaps = 58/398 (14%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGL-ITSWRG 56
+DF PPE NS + GSA + AA W +++++L AAS F+S + GL + SW G
Sbjct 2 VDFGALPPEINSARMYAGPGSAS-LVAAAKMWDSVASDLFSAASAFQSVVWGLTVGSWIG 60
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +M AA +P+ AW+ TA A+L A + V A AYE A+ VP PVI NR +
Sbjct 61 SSAGLMVAAASPYVAWMSVTAGQAQLTAAQVRVAAAAYETAYRLTVPPPVIAENRTELMT 120
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI A A Y+Q W QD EAM Y AT A A L PF I NPG
Sbjct 121 LTATNLLGQNTPAIEANQAAYSQMWGQDAEAMYGYAATAATATEALLPFEDAPLITNPGG 180
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLPSK----LWTLLTKGTYPLTA 218
L A +L+ +V + + A PA +PS LWT ++ PL+
Sbjct 181 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPAQGVVPSSKLGGLWTAVSPHLSPLS- 239
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP-TLKGPLELLPNAV------------ 265
+SSI ++ G +M + ++ ++ L P + N V
Sbjct 240 -NVSSIANNHMSMMGTGVSMTNTLHSM-LKGLAPAAAQAVETAAENGVWAMSSLGSQLGS 297
Query 266 -------RPAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP--------TSAPGGP 309
V+A LG A ++G LSVPP+W A++++TP A+A+P +APG
Sbjct 298 SLGSSGLGAGVAANLGRAASVGSLSVPPAWAAANQAVTPAARALPLTSLTSAAQTAPGHM 357
Query 310 SGTSWAQLGLASLAGGAV-GAVAARTRSGVILRSPAAG 346
G LG + AG + A+ R+ I R+PAAG
Sbjct 358 LGG--LPLGHSVNAGSGINNALRVPARAYAIPRTPAAG 393
>gi|296170357|ref|ZP_06851948.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295895080|gb|EFG74799.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=459
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 131/333 (40%), Positives = 172/333 (52%), Gaps = 54/333 (16%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGLITSWRGP 57
MD+ + PPE NS + GS L AA AW L+ EL A+ + + I+GL T+W GP
Sbjct 1 MDYGVLPPEINSARMYAGPGSGS-MLTAAAAWDELATELRSIAASYSAVISGLTTAWLGP 59
Query 58 SSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLAL 117
SST MAAA AP+ AW+ TA+ AE A AYEAA AA VP PVIETNR +L
Sbjct 60 SSTRMAAAAAPYAAWLNATAAQAEQSGSQARAAAAAYEAAFAATVPPPVIETNRAELESL 119
Query 118 ATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPPAPIANP---- 173
TN FG +T AI A +A YA+ W+QD AM YA +AAAA +TPF PPA NP
Sbjct 120 IATNTFGQNTAAIAANEARYARMWAQDAAAMYGYAGQSAAAAAVTPFDPPAQNTNPAGTA 179
Query 174 GALARLYELIGSVSET----------------VGSFAAPATKNLP--------------- 202
G A + +++G+ + T + S AAPA N P
Sbjct 180 GQTAAVSQVVGTSAGTNSQAALSHLTSATPSALRSLAAPAAVNPPSASSLASFLSSLNSS 239
Query 203 --SKL---WTLLTKGTYPLTAARISSIPVEYVLAFVEGSNMGQMMGNL--AMRSLTPTLK 255
+KL L+ K P IS+I + V G+ + +G+L A+++ TP L
Sbjct 240 PLAKLAGNVELIPKAVLPANDVLISTI-----MGLVIGA---RHLGDLTVAVKAATPGLA 291
Query 256 GPLELLPNAVRPAVSATLGNADTIGGLSVPPSW 288
L A+ VSAT+G A +GGL+VPPSW
Sbjct 292 AGLGYAAPALGSTVSATVGQAGLVGGLAVPPSW 324
>gi|31792997|ref|NP_855490.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|121637710|ref|YP_977933.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224990194|ref|YP_002644881.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
29 more sequence titles
Length=409
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 135/384 (36%), Positives = 181/384 (48%), Gaps = 53/384 (13%)
Query 1 MDFTIFPPEFNSLNIQGS--ARPFLVAANAWKNLSNELSYAASRFESEINGL-ITSWRGP 57
MDF PPE NS + + P L AA AW L+ EL AA+ + S I GL + W GP
Sbjct 1 MDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGP 60
Query 58 SSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLAL 117
SS MAAAVAP+ AWI TA AE + AG YE A AA VP PVIE NR ++L
Sbjct 61 SSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSL 120
Query 118 ATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPPAPIANPGA-- 175
TNIFG +TPAI A +A YA+ W+QD AM YA +A A++L PFS P NP A
Sbjct 121 VATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPSATA 180
Query 176 ------------------LARLYELIGSVSETVGSFAAPATKNLPSKLW--------TLL 209
A+L +LI + T+ S A AT S W T+L
Sbjct 181 AQSAVVAQAAGAAASSDITAQLSQLISLLPSTLQSLATTATATSASAGWDTVLQSITTIL 240
Query 210 TKGTYPLTAARISSIPVEYVLAFVEGSNMGQ-------MMG-NLAMRSLTPT--LKGPLE 259
T P + + +IP + L F + + Q ++G A +L+P L+G
Sbjct 241 ANLTGPYSIIGLGAIPGGWWLTFGQILGLAQNAPGVAALLGPKAAAGALSPLAPLRGGYI 300
Query 260 LLPNAVRPAVSATLGNADTIGGLSVPPSWVADKSITPLAKAVPTSAPG---------GPS 310
+ + + A +G LSVP W P+ +AV + PG
Sbjct 301 ADITPLGGGATGGIARAIYVGSLSVPQGW---AEAAPVMRAVASVLPGTGAAPALAAEAP 357
Query 311 GTSWAQLGLASLAGGAVGAVAART 334
G + ++ L+SLAG A+ A R+
Sbjct 358 GALFGEMALSSLAGRALAGTAVRS 381
>gi|57116921|ref|YP_177844.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148661614|ref|YP_001283137.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148823021|ref|YP_001287775.1| PPE family protein [Mycobacterium tuberculosis F11]
9 more sequence titles
Length=409
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 135/384 (36%), Positives = 181/384 (48%), Gaps = 53/384 (13%)
Query 1 MDFTIFPPEFNSLNIQGS--ARPFLVAANAWKNLSNELSYAASRFESEINGL-ITSWRGP 57
MDF PPE NS + + P L AA AW L+ EL AA+ + S I GL + W GP
Sbjct 1 MDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGP 60
Query 58 SSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLAL 117
SS MAAAVAP+ AWI TA AE + AG YE A AA VP PVIE NR ++L
Sbjct 61 SSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSL 120
Query 118 ATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPPAPIANPGA-- 175
TNIFG +TPAI A +A YA+ W+QD AM YA +A A++L PFS P NP A
Sbjct 121 VATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPSATA 180
Query 176 ------------------LARLYELIGSVSETVGSFAAPATKNLPSKLW--------TLL 209
A+L +LI + T+ S A AT S W T+L
Sbjct 181 AQSAVVAQAAGAAASSDITAQLSQLISLLPSTLQSLATTATATSASAGWDTVLQSITTIL 240
Query 210 TKGTYPLTAARISSIPVEYVLAFVEGSNMGQ-------MMG-NLAMRSLTPT--LKGPLE 259
T P + + +IP + L F + + Q ++G A +L+P L+G
Sbjct 241 ANLTGPYSIIGLGAIPGGWWLTFGQILGLAQNAPGVAALLGPKAAAGALSPLAPLRGGYI 300
Query 260 LLPNAVRPAVSATLGNADTIGGLSVPPSWVADKSITPLAKAVPTSAPG---------GPS 310
+ + + A +G LSVP W P+ +AV + PG
Sbjct 301 GDITPLGGGATGGIARAIYVGSLSVPQGW---AEAAPVMRAVASVLPGTGAAPALAAEAP 357
Query 311 GTSWAQLGLASLAGGAVGAVAART 334
G + ++ L+SLAG A+ A R+
Sbjct 358 GALFGEMALSSLAGRALAGTAVRS 381
>gi|294996719|ref|ZP_06802410.1| PPE family protein [Mycobacterium tuberculosis 210]
gi|13377907|gb|AAK20893.1| Rv1808-like protein [Mycobacterium microti]
gi|13377909|gb|AAK20894.1| Rv1808-like protein [Mycobacterium microti]
gi|339294744|gb|AEJ46855.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339298372|gb|AEJ50482.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length=410
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 134/384 (35%), Positives = 181/384 (48%), Gaps = 53/384 (13%)
Query 1 MDFTIFPPEFNSLNIQGS--ARPFLVAANAWKNLSNELSYAASRFESEINGL-ITSWRGP 57
+DF PPE NS + + P L AA AW L+ EL AA+ + S I GL + W GP
Sbjct 2 LDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGP 61
Query 58 SSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLAL 117
SS MAAAVAP+ AWI TA AE + AG YE A AA VP PVIE NR ++L
Sbjct 62 SSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSL 121
Query 118 ATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPPAPIANPGA-- 175
TNIFG +TPAI A +A YA+ W+QD AM YA +A A++L PFS P NP A
Sbjct 122 VATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPSATA 181
Query 176 ------------------LARLYELIGSVSETVGSFAAPATKNLPSKLW--------TLL 209
A+L +LI + T+ S A AT S W T+L
Sbjct 182 AQSAVVAQAAGAAASSDITAQLSQLISLLPSTLQSLATTATATSASAGWDTVLQSITTIL 241
Query 210 TKGTYPLTAARISSIPVEYVLAFVEGSNMGQ-------MMG-NLAMRSLTPT--LKGPLE 259
T P + + +IP + L F + + Q ++G A +L+P L+G
Sbjct 242 ANLTGPYSIIGLGAIPGGWWLTFGQILGLAQNAPGVAALLGPKAAAGALSPLAPLRGGYI 301
Query 260 LLPNAVRPAVSATLGNADTIGGLSVPPSWVADKSITPLAKAVPTSAPG---------GPS 310
+ + + A +G LSVP W P+ +AV + PG
Sbjct 302 ADITPLGGGATGGIARAIYVGSLSVPQGW---AEAAPVMRAVASVLPGTGAAPALAAEAP 358
Query 311 GTSWAQLGLASLAGGAVGAVAART 334
G + ++ L+SLAG A+ A R+
Sbjct 359 GALFGEMALSSLAGRALAGTAVRS 382
>gi|289446957|ref|ZP_06436701.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289419915|gb|EFD17116.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length=396
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 138/399 (35%), Positives = 193/399 (49%), Gaps = 57/399 (14%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGLIT-SWRG 56
+DF PPE NS + GSA + AA W +++++L AAS F+S + GL T SW G
Sbjct 2 VDFGALPPEINSARMYAGPGSAS-LVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIG 60
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +MAAA +P+ AW+ TA AEL A + V A AYE A+ VP PVI NR +
Sbjct 61 SSAGLMAAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYRLTVPPPVIAENRAELMI 120
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI +A Y + W+QD AM Y AT A A L PF I NPG
Sbjct 121 LIATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG 180
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLP----SKLWTLLTKGTYPLTA 218
L A +L+ +V + + A P P S+LW ++ PL+
Sbjct 181 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPTKSIWPFDQLSELWKAISPHLSPLS- 239
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP-TLKGPLELLPNAVR----------- 266
I S+ +V G +M + ++ ++ L P + N V+
Sbjct 240 -NIVSMLNNHVSMTNSGVSMASTLHSM-LKGLAPAAAQAVETAAQNGVQAMSSLGSQLGS 297
Query 267 --------PAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP----TSAPGGPSGTS 313
V+A LG A ++G LSVPP+W A++++TP A+A+P TSA G
Sbjct 298 SLGSSGLGAGVAANLGRAASVGSLSVPPAWAAANQAVTPAARALPLTSLTSAAQTAPGHM 357
Query 314 WAQLGLASL--AGGAVGAV--AART--RSGVILRSPAAG 346
L L L +GG G V A R R+ V+ R PAAG
Sbjct 358 LGGLPLGQLTNSGGGFGGVSNALRMPPRAYVMPRVPAAG 396
>gi|167967397|ref|ZP_02549674.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|253799148|ref|YP_003032149.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|254231990|ref|ZP_04925317.1| PPE family protein [Mycobacterium tuberculosis C]
24 more sequence titles
Length=410
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 134/384 (35%), Positives = 181/384 (48%), Gaps = 53/384 (13%)
Query 1 MDFTIFPPEFNSLNIQGS--ARPFLVAANAWKNLSNELSYAASRFESEINGL-ITSWRGP 57
+DF PPE NS + + P L AA AW L+ EL AA+ + S I GL + W GP
Sbjct 2 LDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGP 61
Query 58 SSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLAL 117
SS MAAAVAP+ AWI TA AE + AG YE A AA VP PVIE NR ++L
Sbjct 62 SSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSL 121
Query 118 ATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPPAPIANPGA-- 175
TNIFG +TPAI A +A YA+ W+QD AM YA +A A++L PFS P NP A
Sbjct 122 VATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPSATA 181
Query 176 ------------------LARLYELIGSVSETVGSFAAPATKNLPSKLW--------TLL 209
A+L +LI + T+ S A AT S W T+L
Sbjct 182 AQSAVVAQAAGAAASSDITAQLSQLISLLPSTLQSLATTATATSASAGWDTVLQSITTIL 241
Query 210 TKGTYPLTAARISSIPVEYVLAFVEGSNMGQ-------MMG-NLAMRSLTPT--LKGPLE 259
T P + + +IP + L F + + Q ++G A +L+P L+G
Sbjct 242 ANLTGPYSIIGLGAIPGGWWLTFGQILGLAQNAPGVAALLGPKAAAGALSPLAPLRGGYI 301
Query 260 LLPNAVRPAVSATLGNADTIGGLSVPPSWVADKSITPLAKAVPTSAPG---------GPS 310
+ + + A +G LSVP W P+ +AV + PG
Sbjct 302 GDITPLGGGATGGIARAIYVGSLSVPQGW---AEAAPVMRAVASVLPGTGAAPALAAEAP 358
Query 311 GTSWAQLGLASLAGGAVGAVAART 334
G + ++ L+SLAG A+ A R+
Sbjct 359 GALFGEMALSSLAGRALAGTAVRS 382
>gi|308372058|ref|ZP_07427232.2| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308334577|gb|EFP23428.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
Length=399
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 134/384 (35%), Positives = 181/384 (48%), Gaps = 53/384 (13%)
Query 1 MDFTIFPPEFNSLNIQGS--ARPFLVAANAWKNLSNELSYAASRFESEINGL-ITSWRGP 57
+DF PPE NS + + P L AA AW L+ EL AA+ + S I GL + W GP
Sbjct 2 LDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGP 61
Query 58 SSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLAL 117
SS MAAAVAP+ AWI TA AE + AG YE A AA VP PVIE NR ++L
Sbjct 62 SSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSL 121
Query 118 ATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPPAPIANPGA-- 175
TNIFG +TPAI A +A YA+ W+QD AM YA +A A++L PFS P NP A
Sbjct 122 VATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPSATA 181
Query 176 ------------------LARLYELIGSVSETVGSFAAPATKNLPSKLW--------TLL 209
A+L +LI + T+ S A AT S W T+L
Sbjct 182 AQSAVVAQAAGAAASSDITAQLSQLISLLPSTLQSLATTATATSASAGWDTVLQSITTIL 241
Query 210 TKGTYPLTAARISSIPVEYVLAFVEGSNMGQ-------MMG-NLAMRSLTPT--LKGPLE 259
T P + + +IP + L F + + Q ++G A +L+P L+G
Sbjct 242 ANLTGPYSIIGLGAIPGGWWLTFGQILGLAQNAPGVAALLGPKAAAGALSPLAPLRGGYI 301
Query 260 LLPNAVRPAVSATLGNADTIGGLSVPPSWVADKSITPLAKAVPTSAPG---------GPS 310
+ + + A +G LSVP W P+ +AV + PG
Sbjct 302 GDITPLGGGATGGIARAIYVGSLSVPQGW---AEAAPVMRAVASVLPGTGAAPALAAEAP 358
Query 311 GTSWAQLGLASLAGGAVGAVAART 334
G + ++ L+SLAG A+ A R+
Sbjct 359 GALFGEMALSSLAGRALAGTAVRS 382
>gi|289569375|ref|ZP_06449602.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289543129|gb|EFD46777.1| PPE family protein [Mycobacterium tuberculosis T17]
Length=397
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 138/400 (35%), Positives = 192/400 (48%), Gaps = 58/400 (14%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGLIT-SWRG 56
+DF PPE NS + GSA + AA W +++++L AAS F+S + GL T SW G
Sbjct 2 VDFGALPPEINSARMYAGPGSAS-LVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIG 60
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +MAAA +P+ AW+ TA A+L A + V A AYE A+ VP PVI NR +
Sbjct 61 SSAGLMAAAASPYVAWMSVTAGQAQLTAAQVRVAAAAYETAYRLTVPPPVIAENRTELMT 120
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI A A Y+Q W QD EAM Y AT A A L PF I NPG
Sbjct 121 LTATNLLGQNTPAIEANQAAYSQMWGQDAEAMYGYAATAATATEALLPFEDAPLITNPGG 180
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLP----SKLWTLLTKGTYPLTA 218
L A +L+ +V + + A P P S+LW ++ PL+
Sbjct 181 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPTKSIWPFDQLSELWKAISPHLSPLS- 239
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSL--TPTLKGPLELLPNAVR---------- 266
I S+ +V G +M + ++ ++ L + N V+
Sbjct 240 -NIVSMLNNHVSMTNSGVSMASTLHSM-LKGLAPAAAAQAVQTAAQNGVQAMSSLGSQLG 297
Query 267 ---------PAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP----TSAPGGPSGT 312
V+A LG A ++G LSVP +W A++++TP A+A+P TSA G
Sbjct 298 SSLGSSGLGAGVAANLGRAASVGSLSVPQAWAAANQAVTPAARALPLTSLTSAAQTAPGH 357
Query 313 SWAQLGLASL--AGGAVGAV--AART--RSGVILRSPAAG 346
L L L +GG G V A R R+ V+ R PAAG
Sbjct 358 MLGGLPLGQLTNSGGGFGGVSNALRMPPRAYVMPRVPAAG 397
>gi|289554847|ref|ZP_06444057.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|289439479|gb|EFD21972.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
Length=395
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 137/399 (35%), Positives = 190/399 (48%), Gaps = 57/399 (14%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGLIT-SWRG 56
MDF PPE NS + GSA + AA W +++++L AAS F+S + GL T SW G
Sbjct 1 MDFGALPPEINSARMYAGPGSAS-LVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIG 59
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +M AA +P+ AW+ TA AEL A + V A AYE A+ VP PVI NR +
Sbjct 60 SSAGLMVAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMI 119
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI +A Y + W+QD AM Y AT A A L PF I NPG
Sbjct 120 LIATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG 179
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLP----SKLWTLLTKGTYPLTA 218
L A +L+ +V + + A P P S+LW ++ PL+
Sbjct 180 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPTKSIWPFDQLSELWKAISPHLSPLS- 238
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP-TLKGPLELLPNAVR----------- 266
I S+ +V G +M + ++ ++ P + N VR
Sbjct 239 -NIVSMLNNHVSMTNSGVSMASTLHSM-LKGFAPAAAQAVETAAQNGVRAMSSLGSQLGS 296
Query 267 --------PAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP----TSAPGGPSGTS 313
V+A LG A ++G LSVP +W A++++TP A+A+P TSA G
Sbjct 297 SLGSSGLGAGVAANLGRAASVGSLSVPQAWAAANQAVTPAARALPLTSLTSAAQTAPGHM 356
Query 314 WAQLGLASL--AGGAVGAV--AART--RSGVILRSPAAG 346
L L L +GG G V A R R+ V+ R PAAG
Sbjct 357 LGGLPLGQLTNSGGGFGGVSNALRMPPRAYVMPRVPAAG 395
>gi|294993380|ref|ZP_06799071.1| PPE family protein [Mycobacterium tuberculosis 210]
Length=390
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 129/385 (34%), Positives = 188/385 (49%), Gaps = 51/385 (13%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGL-ITSWRG 56
+DF PPE NS + GSA + AA W +++++L AAS F+S + GL + SW G
Sbjct 2 VDFGALPPEINSARMYAGPGSAS-LVAAAQMWDSVASDLFSAASAFQSVVWGLTVGSWIG 60
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +M AA +P+ AW+ TA AEL A + V A AYE A+ VP PVI NR +
Sbjct 61 SSAGLMVAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMI 120
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI +A Y + W+QD AM Y AT A A L PF I NPG
Sbjct 121 LIATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG 180
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLP----SKLWTLLTKGTYPLTA 218
L A +L+ +V + + A P P S+LW ++ PL+
Sbjct 181 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPTKSIWPFDQLSELWKAISPHLSPLS- 239
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP-TLKGPLELLPNAVR----------- 266
I S+ +V G +M + ++ ++ P + N V+
Sbjct 240 -NIVSMLNNHVSMTNSGVSMASTLHSM-LKGFAPAAAQAVETAAQNGVQAMSSLGSSLGS 297
Query 267 ----PAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVPTSAPGGPSGTSWAQLGLAS 321
V+A LG A ++G LSVP +W A++++TP A+A+P + S TS A+ G
Sbjct 298 SGLGGGVAANLGRAASVGSLSVPQAWAAANQAVTPAARALPLT-----SLTSAAERGPGQ 352
Query 322 LAGGA-VGAVAARTRSGV--ILRSP 343
+ GG VG + AR G+ +LR P
Sbjct 353 MLGGLPVGQMGARAGGGLSGVLRVP 377
>gi|307084423|ref|ZP_07493536.1| putative PPE family protein [Mycobacterium tuberculosis SUMu012]
gi|308365983|gb|EFP54834.1| putative PPE family protein [Mycobacterium tuberculosis SUMu012]
Length=336
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/178 (49%), Positives = 105/178 (59%), Gaps = 3/178 (1%)
Query 1 MDFTIFPPEFNSLNIQGS--ARPFLVAANAWKNLSNELSYAASRFESEINGL-ITSWRGP 57
+DF PPE NS + + P L AA AW L+ EL AA+ + S I GL + W GP
Sbjct 2 LDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGP 61
Query 58 SSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLAL 117
SS MAAAVAP+ AWI TA AE + AG YE A AA VP PVIE NR ++L
Sbjct 62 SSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSL 121
Query 118 ATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPPAPIANPGA 175
TNIFG +TPAI A +A YA+ W+QD AM YA +A A++L PFS P NP A
Sbjct 122 VATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPSA 179
>gi|306784092|ref|ZP_07422414.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|306788459|ref|ZP_07426781.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|306792785|ref|ZP_07431087.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
gi|306797185|ref|ZP_07435487.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
gi|308331160|gb|EFP20011.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|308334942|gb|EFP23793.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308338747|gb|EFP27598.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
gi|308342446|gb|EFP31297.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
Length=396
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 136/399 (35%), Positives = 191/399 (48%), Gaps = 57/399 (14%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGLIT-SWRG 56
+DF PPE NS + GSA + AA W +++++L AAS F+S + GL T SW G
Sbjct 2 VDFGALPPEINSARMYAGPGSAS-LVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIG 60
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +M AA +P+ AW+ TA AEL A + V A AYE A+ VP PVI NR +
Sbjct 61 SSAGLMVAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMI 120
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI +A Y + W+QD AM Y AT A A L PF I NPG
Sbjct 121 LIATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG 180
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLP----SKLWTLLTKGTYPLTA 218
L A +L+ +V + + A P P S+LW ++ PL+
Sbjct 181 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPTKSIWPFDQLSELWKAISPHLSPLS- 239
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP-TLKGPLELLPNAVR----------- 266
I S+ +V G +M + ++ ++ P + N V+
Sbjct 240 -NIVSMLNNHVSMTNSGVSMASTLHSM-LKGFAPAAAQAVETAAQNGVQAMSSLGSQLGS 297
Query 267 --------PAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP----TSAPGGPSGTS 313
V+A LG A ++G LSVPP+W A++++TP A+A+P TSA G
Sbjct 298 SLGSSGLGAGVAANLGRAASVGSLSVPPAWAAANQAVTPAARALPLTSLTSAAQTAPGHM 357
Query 314 WAQLGLASL--AGGAVGAV--AART--RSGVILRSPAAG 346
L L L +GG G V A R R+ V+ R PAAG
Sbjct 358 LGGLPLGQLTNSGGGFGGVSNALRMPPRAYVMPRVPAAG 396
>gi|340626377|ref|YP_004744829.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340004567|emb|CCC43711.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length=396
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 136/399 (35%), Positives = 191/399 (48%), Gaps = 57/399 (14%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGLIT-SWRG 56
+DF PPE NS + GSA + AA W +++++L AAS F+S + GL T SW G
Sbjct 2 VDFGALPPEINSARMYAGPGSAS-LVAAAQMWDSVASDLFSAASAFQSVVWGLTTGSWIG 60
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +MAAA +P+ AW+ TA A+L A + V A AYE AH VP PVI NR +
Sbjct 61 SSAGLMAAAASPYVAWMSVTAGQAQLTAAQVRVAAAAYETAHGLTVPPPVIAENRAELMI 120
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI +A Y + W+QD AM Y AT A A L PF I NPG
Sbjct 121 LIATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG 180
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLP----SKLWTLLTKGTYPLTA 218
L A +L+ +V + + A P P S+LW ++ PL+
Sbjct 181 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPTKSIWPFDQLSELWKAISPHLSPLS- 239
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP-TLKGPLELLPNAVR----------- 266
I S+ +V G +M + ++ ++ P + N V+
Sbjct 240 -NIVSMLNNHVSMTNSGVSMASTLHSM-LKGFAPAAAQAVETAAQNGVQAMSSLGSQLGS 297
Query 267 --------PAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP----TSAPGGPSGTS 313
V+A LG A ++G LSVP +W A++++TP A+A+P TSA G
Sbjct 298 SLGSSGLGAGVAANLGRAASVGSLSVPQAWAAANQAVTPAARALPLTSLTSAAQTAPGHM 357
Query 314 WAQLGLASL--AGGAVGAV--AART--RSGVILRSPAAG 346
L L L +GG G V A R R+ V+ R PAAG
Sbjct 358 LGGLPLGQLTNSGGGFGGVSNALRMPPRAYVMPRVPAAG 396
>gi|118617664|ref|YP_905996.1| PPE family protein [Mycobacterium ulcerans Agy99]
gi|118569774|gb|ABL04525.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=388
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 128/390 (33%), Positives = 183/390 (47%), Gaps = 46/390 (11%)
Query 1 MDFTIFPPEFNSLNIQGS--ARPFLVAANAWKNLSNELSYAASRFESEINGLITSWRGPS 58
MD+ PPE NS + + AA AW L+ EL AAS + S GL W+GP+
Sbjct 1 MDYAALPPEINSARMYAGPGSTSMQTAATAWDALATELYSAASCYSSITAGLAGKWQGPA 60
Query 59 STIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLALA 118
+T MA A AP+ AW+ TTA+ AEL + A+ A AA VP PVI NR AL
Sbjct 61 ATAMAQAAAPYAAWLSTTAAQAELASAQARAAVSAHAGAFAATVPPPVIAANRAHLAALI 120
Query 119 TTNIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPPAPIANPGALAR 178
TN+ G ++PAI +A Y Q W+QD AM YA A+A RLTPF+ P PI +P LAR
Sbjct 121 ATNLLGQNSPAIATTEANYEQMWAQDAAAMYGYAGACASATRLTPFTSPPPITDPVGLAR 180
Query 179 LYELIGSVSETVGSFAAPATK----------NLPSKLWTLLT------------KGTYPL 216
+ + + T S AAP+ + LP L L+T + L
Sbjct 181 --QGVAATQSTGASAAAPSLEAVLAASQVITTLPGTLAGLVTAPIMTSLNSAFTSLSTSL 238
Query 217 TAARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTPTLKGPLELLPNAVRP--------- 267
+ ++P+ + + + + G A SLT G ++ + + +
Sbjct 239 SKLSSLAVPLNFAMYALNFLDKGIGFTKAATGSLTAAATGAVKAVESGAQSLGSVSLGIT 298
Query 268 ----AVSATLGNADTIGGLSVPPSWVADKSITPLAKAVPTS------APGGPSGTSWAQL 317
A+SA +G T+G LSVP SW+ + + +A +P+S G +G + L
Sbjct 299 GSGAALSAPMGRGMTVGALSVPHSWITAPATSAVAANLPSSFSSVGTLDSGTAGMPFMPL 358
Query 318 -GLASLAGGAVGAVAARTRSGVILRSPAAG 346
G+A + A RS V+ RSPAAG
Sbjct 359 TGMAGRSANGPAASRFELRSTVVPRSPAAG 388
>gi|240168614|ref|ZP_04747273.1| PPE family protein, PPE51_2 [Mycobacterium kansasii ATCC 12478]
Length=378
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/347 (35%), Positives = 174/347 (51%), Gaps = 52/347 (14%)
Query 1 MDFTIFPPEFNSLNIQGSARP--FLVAANAWKNLSNELSYAASRFESEINGLIT-SWRGP 57
MDF + PPE NS I P L AA +W L+ EL A +ES ++GL T W GP
Sbjct 1 MDFALLPPEVNSGRIYTGPGPGSLLAAAGSWDALATELDTTAQTYESVVSGLTTLDWYGP 60
Query 58 SSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLAL 117
+S MAA VAP+ +W+ TTA+ + A A A++ A A VP P I NR+ +AL
Sbjct 61 ASESMAAKVAPYVSWLYTTATQTKQTAMQARAAAAAFDQAFAMTVPPPAIAANRIQLMAL 120
Query 118 ATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPPAPIANPGALA 177
TN FG +T AI A +A YA+ W+QD AM YAT + AAA+L PF P+ +P L+
Sbjct 121 IATNFFGQNTAAIAATEAQYAEMWAQDAAAMYGYATSSTAAAQLMPFPSPSQTTDPAGLS 180
Query 178 R-----------------LYELIGSVSETVGSFAAPATKN-LPSKLWTLLTKGTYPLTAA 219
+ +L+ +VS+++G+ + N LP+ L G + + A
Sbjct 181 AQSAAVAQANASAAATDPISQLVAAVSQSLGALSGLQIPNFLPADYAVL--DGIFAIYAT 238
Query 220 RISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTPTLKGPLELLP-------NAVRP----- 267
+ ++ V + +G ++G+ A +L P L E +P A +P
Sbjct 239 FSA---IDSVESIADG-----IIGDEA--ALVPALTSATEAMPAEASTLVAAQQPVGAGS 288
Query 268 -----AVSATLGNADTIGGLSVPPSWV--ADKSITPLAKAVPTSAPG 307
AV A+ G A +IG LSVP SW A ++++ L+ A T+ PG
Sbjct 289 GLGPNAVLASAGRAGSIGQLSVPASWAAPATRTVSALSPAGLTTIPG 335
>gi|183981860|ref|YP_001850151.1| PPE family protein [Mycobacterium marinum M]
gi|183175186|gb|ACC40296.1| PPE family protein [Mycobacterium marinum M]
Length=388
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 126/388 (33%), Positives = 183/388 (48%), Gaps = 42/388 (10%)
Query 1 MDFTIFPPEFNSLNIQGS--ARPFLVAANAWKNLSNELSYAASRFESEINGLITSWRGPS 58
MD+ PPE NS + + AA AW L+ EL AAS + S GL W+GP+
Sbjct 1 MDYAALPPEINSARMYSGPGSTSMQTAATAWDALATELYSAASCYSSITAGLAGKWQGPA 60
Query 59 STIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLALA 118
+T MA A AP+ AW+ TTA+ AEL + A+ A AA VP PVI NR AL
Sbjct 61 ATAMAQAAAPYAAWLSTTAAQAELASAQARAAVSAHAGAFAATVPPPVIAANRAHLAALI 120
Query 119 TTNIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPPAPIANPGALAR 178
TN+ G ++PAI +A Y Q W+QD AM YA A+A RLTPF+ P PI +P LAR
Sbjct 121 ATNLLGQNSPAIATTEANYEQMWAQDAAAMYGYAGACASATRLTPFTSPPPITDPVGLAR 180
Query 179 L----------------YELIGSVSETV----GSFAAPATKNLPSKLWTLLTKGTYPLTA 218
E + + S+ + G+ A AT + + L + T + L+
Sbjct 181 QGVAATQSTGASAAAPSLEAVLAASQVITTLPGTLAGLATAPIMTSLNSAFTSLSTSLSK 240
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTPTLKGPLELLPNAVRP----------- 267
++P+ + + + + G A SLT G ++ + + +
Sbjct 241 LSSLAVPLNFAMYALNFLDKGIGFTKAATGSLTAAATGAVKAVESGAQSLGSVSLGITGS 300
Query 268 --AVSATLGNADTIGGLSVPPSWVADKSITPLAKAVPTS------APGGPSGTSWAQL-G 318
A+SA +G T+G LSVP SW+ + + +A +P+S G +G + L G
Sbjct 301 GAALSAAMGRGMTVGALSVPHSWITAPATSAVAANLPSSLSSVGTLDSGTAGMPFMPLTG 360
Query 319 LASLAGGAVGAVAARTRSGVILRSPAAG 346
+A + A RS V+ RSPAAG
Sbjct 361 MAGRSANGPAASRFELRSTVVPRSPAAG 388
>gi|308231818|ref|ZP_07413879.2| PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|308215968|gb|EFO75367.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
Length=395
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 136/399 (35%), Positives = 190/399 (48%), Gaps = 57/399 (14%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGLIT-SWRG 56
MDF PPE NS + GSA + AA W +++++L AAS F+S + GL T SW G
Sbjct 1 MDFGALPPEINSARMYAGPGSAS-LVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIG 59
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +M AA +P+ AW+ TA AEL A + V A AYE A+ VP PVI NR +
Sbjct 60 SSAGLMVAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMI 119
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI +A Y + W+QD AM Y AT A A L PF I NPG
Sbjct 120 LIATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG 179
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLP----SKLWTLLTKGTYPLTA 218
L A +L+ +V + + A P P S+LW ++ PL+
Sbjct 180 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPTKSIWPFDQLSELWKAISPHLSPLS- 238
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP-TLKGPLELLPNAVR----------- 266
I S+ +V G +M + ++ ++ P + N V+
Sbjct 239 -NIVSMLNNHVSMTNSGVSMASTLHSM-LKGFAPAAAQAVETAAQNGVQAMSSLGSQLGS 296
Query 267 --------PAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP----TSAPGGPSGTS 313
V+A LG A ++G LSVP +W A++++TP A+A+P TSA G
Sbjct 297 SLGSSGLGAGVAANLGRAASVGSLSVPQAWAAANQAVTPAARALPLTSLTSAAQTAPGHM 356
Query 314 WAQLGLASL--AGGAVGAV--AART--RSGVILRSPAAG 346
L L L +GG G V A R R+ V+ R PAAG
Sbjct 357 LGGLPLGQLTNSGGGFGGVSNALRMPPRAYVMPRVPAAG 395
>gi|254364253|ref|ZP_04980299.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|134149767|gb|EBA41812.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
Length=395
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 137/399 (35%), Positives = 190/399 (48%), Gaps = 57/399 (14%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGLIT-SWRG 56
MDF PPE NS + GSA + AA W +++++L AAS F+S + GL T SW G
Sbjct 1 MDFGALPPEINSARMYAGPGSAS-LVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIG 59
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +M AA +P+ AW+ TA AEL A + V A AYE A+ VP PVI NR +
Sbjct 60 SSAGLMVAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMI 119
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI +A Y + W+QD AM Y AT A A L PF I NPG
Sbjct 120 LIATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG 179
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLP----SKLWTLLTKGTYPLTA 218
L A +L+ +V + + A P P S+LW ++ PL+
Sbjct 180 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPTKSIWPFDQLSELWKAISPHLSPLS- 238
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP-TLKGPLELLPNAV------------ 265
I S+ +V G +M + ++ ++ L P + N V
Sbjct 239 -NIVSMLNNHVSMTNSGVSMASTLHSM-LKGLAPAAAQAVETAAQNGVWAMSSLGSQLGS 296
Query 266 -------RPAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP----TSAPGGPSGTS 313
V+A LG A ++G LSVP +W A++++TP A+A+P TSA G
Sbjct 297 SLGSSGLGAGVAANLGRAASVGSLSVPQAWAAANQAVTPAARALPLTSLTSAAQTAPGHM 356
Query 314 WAQLGLASL--AGGAVGAV--AART--RSGVILRSPAAG 346
L L L +GG G V A R R+ V+ R PAAG
Sbjct 357 LGGLPLGQLTNSGGGFGGVSNALRMPPRAYVMPRVPAAG 395
>gi|121637292|ref|YP_977515.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224989766|ref|YP_002644453.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121492939|emb|CAL71410.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224772879|dbj|BAH25685.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601310|emb|CCC63983.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=396
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 135/399 (34%), Positives = 191/399 (48%), Gaps = 57/399 (14%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGL-ITSWRG 56
+DF PPE NS + GSA + AA W +++++L AAS F+S + GL + SW G
Sbjct 2 VDFGALPPEINSARMYAGPGSAS-LVAAAQMWDSVASDLFSAASAFQSVVWGLTVGSWIG 60
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +M AA +P+ AW+ TA AEL A + V A AYE A+ VP PVI NR +
Sbjct 61 SSAGLMVAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMI 120
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI +A Y + W+QD AM Y AT A A L PF I NPG
Sbjct 121 LIATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG 180
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLP----SKLWTLLTKGTYPLTA 218
L A +L+ +V + + A P P S+LW ++ PL+
Sbjct 181 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPTKSIWPFDQLSELWKAISPHLSPLS- 239
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP-TLKGPLELLPNAVR----------- 266
I S+ +V G +M + ++ ++ P + N V+
Sbjct 240 -NIVSMLNNHVSMTNSGVSMASTLHSM-LKGFAPAAAQAVETAAQNGVQAMSSLGSQLGS 297
Query 267 --------PAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP----TSAPGGPSGTS 313
V+A LG A ++G LSVPP+W A++++TP A+A+P TSA G
Sbjct 298 SLGSSGLGAGVAANLGRAASVGSLSVPPAWAAANQAVTPAARALPLTSLTSAAQTAPGHM 357
Query 314 WAQLGLASL--AGGAVGAV--AART--RSGVILRSPAAG 346
L L L +GG G V A R R+ V+ R PAAG
Sbjct 358 LGGLPLGQLTNSGGGFGGVSNALRMPPRAYVMPRVPAAG 396
>gi|253799589|ref|YP_003032590.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|297730905|ref|ZP_06960023.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
gi|313658238|ref|ZP_07815118.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
gi|253321092|gb|ACT25695.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
Length=396
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 136/399 (35%), Positives = 190/399 (48%), Gaps = 57/399 (14%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGLIT-SWRG 56
+DF PPE NS + GSA + AA W +++++L AAS F+S + GL T SW G
Sbjct 2 VDFGALPPEINSARMYAGPGSAS-LVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIG 60
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +M AA +P+ AW+ TA AEL A + V A AYE A+ VP PVI NR +
Sbjct 61 SSAGLMVAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMI 120
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI +A Y + W+QD AM Y AT A A L PF I NPG
Sbjct 121 LIATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG 180
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLP----SKLWTLLTKGTYPLTA 218
L A +L+ +V + + A P P S+LW ++ PL+
Sbjct 181 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPTKSIWPFDQLSELWKAISPHLSPLS- 239
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP-TLKGPLELLPNAVR----------- 266
I S+ +V G +M + ++ ++ P + N VR
Sbjct 240 -NIVSMLNNHVSMTNSGVSMASTLHSM-LKGFAPAAAQAVETAAQNGVRAMSSLGSQLGS 297
Query 267 --------PAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP----TSAPGGPSGTS 313
V+A LG A ++G LSVP +W A++++TP A+A+P TSA G
Sbjct 298 SLGSSGLGAGVAANLGRAASVGSLSVPQAWAAANQAVTPAARALPLTSLTSAAQTAPGHM 357
Query 314 WAQLGLASL--AGGAVGAV--AART--RSGVILRSPAAG 346
L L L +GG G V A R R+ V+ R PAAG
Sbjct 358 LGGLPLGQLTNSGGGFGGVSNALRMPPRAYVMPRVPAAG 396
>gi|333990650|ref|YP_004523264.1| PPE family protein [Mycobacterium sp. JDM601]
gi|333486619|gb|AEF36011.1| PPE family protein [Mycobacterium sp. JDM601]
Length=386
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/196 (43%), Positives = 109/196 (56%), Gaps = 4/196 (2%)
Query 1 MDFTIFPPEFNSLNIQGSARP--FLVAANAWKNLSNELSYAASRFESEINGLIT-SWRGP 57
MDF PPE NS I A P L AA AW+ L+ EL+ AA+ + S I GL T SW GP
Sbjct 1 MDFGALPPEINSARIYAGAGPGSLLAAATAWQELATELNSAAASYGSVIAGLTTGSWAGP 60
Query 58 SSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLAL 117
SS MAAA P+ W+ T + A+ A +S AYE A AA VP P+I NR + L
Sbjct 61 SSVAMAAAAGPYITWLNATGAQAQQAAAQVSAAVAAYETAFAATVPPPLITANRSLQATL 120
Query 118 ATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPPAPIANP-GAL 176
TNI G +T AI +A Y + W+QD AM YA +A A R++PF+ P +P G +
Sbjct 121 TATNILGQNTAAIATTEADYLEMWAQDTAAMYGYAGASALATRVSPFTSPPQTTDPSGQI 180
Query 177 ARLYELIGSVSETVGS 192
+ Y + S + T G+
Sbjct 181 TQSYSVAQSAAATTGT 196
>gi|297733134|ref|ZP_06962252.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
gi|313660465|ref|ZP_07817345.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
Length=378
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 127/374 (34%), Positives = 183/374 (49%), Gaps = 54/374 (14%)
Query 22 FLVAANAWKNLSNELSYAASRFESEINGL-ITSWRGPSSTIMAAAVAPFRAWIVTTASLA 80
+ AA W +++++L AAS F+S + GL + SW G S+ +MAAA +P+ AW+ TA A
Sbjct 10 LVAAAKMWDSVASDLFSAASAFQSVVWGLTVGSWIGSSAGLMAAAASPYVAWMSVTAGQA 69
Query 81 ELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLALATTNIFGIHTPAIFALDALYAQY 140
+L A + V A AYE A+ VP PVI NR + L TN+ G +TPAI A A Y+Q
Sbjct 70 QLTAAQVRVAAAAYETAYRLTVPPPVIAENRTELMTLTATNLLGQNTPAIEANQAAYSQM 129
Query 141 WSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGAL-------------ARLYELIGSV 186
W QD EAM Y AT A A L PF I NPG L A +L+ +V
Sbjct 130 WGQDAEAMYGYAATAATATEALLPFEDAPLITNPGGLLEQAVAVEEAIDTAAANQLMNNV 189
Query 187 SETVGSFAAPATKNLPSK----LWTLLTKGTYPLTAARISSIPVEYVLAFVEGSNMGQMM 242
+ + A PA +PS LWT ++ PL+ +SSI ++ G +M +
Sbjct 190 PQALQQLAQPAQGVVPSSKLGGLWTAVSPHLSPLS--NVSSIANNHMSMMGTGVSMTNTL 247
Query 243 GNLAMRSLTP-TLKGPLELLPNAV-------------------RPAVSATLGNADTIGGL 282
++ ++ L P + N V V+A LG A ++G L
Sbjct 248 HSM-LKGLAPAAAQAVETAAENGVWAMSSLGSQLGSSLGSSGLGAGVAANLGRAASVGSL 306
Query 283 SVPPSW-VADKSITPLAKAVP--------TSAPGGPSGTSWAQLGLASLAGGAV-GAVAA 332
SVPP+W A++++TP A+A+P +APG G LG + AG + A+
Sbjct 307 SVPPAWAAANQAVTPAARALPLTSLTSAAQTAPGHMLGG--LPLGHSVNAGSGINNALRV 364
Query 333 RTRSGVILRSPAAG 346
R+ I R+PAAG
Sbjct 365 PARAYAIPRTPAAG 378
>gi|339294339|gb|AEJ46450.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length=396
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 135/399 (34%), Positives = 191/399 (48%), Gaps = 57/399 (14%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGLIT-SWRG 56
+DF PPE NS + GSA + AA W +++++L AAS F+S + GL T SW G
Sbjct 2 VDFGALPPEINSARMYAGPGSAS-LVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIG 60
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +MAAA +P+ AW+ TA A+L A + V A AYE A+ VP PVI NR +
Sbjct 61 SSAGLMAAAASPYVAWMSVTAGQAQLTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMI 120
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI +A Y + W+QD AM Y AT A A L PF I NPG
Sbjct 121 LIATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG 180
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLP----SKLWTLLTKGTYPLTA 218
L A +L+ +V + + A P P S+LW ++ PL+
Sbjct 181 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPTKSIWPFDQLSELWKAISPHLSPLS- 239
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP-TLKGPLELLPNAVR----------- 266
I S+ +V G +M + ++ ++ P + N V+
Sbjct 240 -NIVSMLNNHVSMTNSGVSMASTLHSM-LKGFAPAAAQAVETAAQNGVQAMSSLGSQLGS 297
Query 267 --------PAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP----TSAPGGPSGTS 313
V+A LG A ++G LSVP +W A++++TP A+A+P TSA G
Sbjct 298 SLGSSGLGAGVAANLGRAASVGSLSVPQAWAAANQAVTPAARALPLTSLTSAAQTAPGHM 357
Query 314 WAQLGLASL--AGGAVGAV--AART--RSGVILRSPAAG 346
L L L +GG G V A R R+ V+ R PAAG
Sbjct 358 LGGLPLGQLTNSGGGFGGVSNALRMPPRAYVMPRVPAAG 396
>gi|289574028|ref|ZP_06454255.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289753443|ref|ZP_06512821.1| PPE family protein [Mycobacterium tuberculosis EAS054]
gi|339631430|ref|YP_004723072.1| PPE family protein [Mycobacterium africanum GM041182]
gi|289538459|gb|EFD43037.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289694030|gb|EFD61459.1| PPE family protein [Mycobacterium tuberculosis EAS054]
gi|339330786|emb|CCC26457.1| PPE family protein [Mycobacterium africanum GM041182]
Length=396
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 135/399 (34%), Positives = 190/399 (48%), Gaps = 57/399 (14%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGLIT-SWRG 56
+DF PPE NS + GSA + AA W +++++L AAS F+S + GL T SW G
Sbjct 2 VDFGALPPEINSARMYAGPGSAS-LVAAAQMWDSVASDLFSAASAFQSVVWGLTTGSWIG 60
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +M AA +P+ AW+ TA AEL A + V A AYE A+ VP PVI NR +
Sbjct 61 SSAGLMVAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMI 120
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI +A Y + W+QD AM Y AT A A L PF I NPG
Sbjct 121 LIATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG 180
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLP----SKLWTLLTKGTYPLTA 218
L A +L+ +V + + A P P S+LW ++ PL+
Sbjct 181 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPTKSIWPFDQLSELWKAISPHLSPLS- 239
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP-TLKGPLELLPNAVR----------- 266
I S+ +V G +M + ++ ++ P + N V+
Sbjct 240 -NIVSMLNNHVSMTNSGVSMASTLHSM-LKGFAPAAAQAVETAAQNGVQAMSSLGSQLGS 297
Query 267 --------PAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP----TSAPGGPSGTS 313
V+A LG A ++G LSVP +W A++++TP A+A+P TSA G
Sbjct 298 SLGSSGLGAGVAANLGRAASVGSLSVPQAWAAANQAVTPAARALPLTSLTSAAQTAPGHM 357
Query 314 WAQLGLASL--AGGAVGAV--AART--RSGVILRSPAAG 346
L L L +GG G V A R R+ V+ R PAAG
Sbjct 358 LGGLPLGQLTNSGGGFGGVSNALRMPPRAYVMPRVPAAG 396
>gi|57116852|ref|YP_177801.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148661151|ref|YP_001282674.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148822583|ref|YP_001287337.1| PPE family protein [Mycobacterium tuberculosis F11]
21 more sequence titles
Length=396
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 135/399 (34%), Positives = 190/399 (48%), Gaps = 57/399 (14%)
Query 1 MDFTIFPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGLIT-SWRG 56
+DF PPE NS + GSA + AA W +++++L AAS F+S + GL T SW G
Sbjct 2 VDFGALPPEINSARMYAGPGSAS-LVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIG 60
Query 57 PSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLA 116
S+ +M AA +P+ AW+ TA AEL A + V A AYE A+ VP PVI NR +
Sbjct 61 SSAGLMVAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMI 120
Query 117 LATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGA 175
L TN+ G +TPAI +A Y + W+QD AM Y AT A A L PF I NPG
Sbjct 121 LIATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG 180
Query 176 L-------------ARLYELIGSVSETVGSFAAPATKNLP----SKLWTLLTKGTYPLTA 218
L A +L+ +V + + A P P S+LW ++ PL+
Sbjct 181 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPTKSIWPFDQLSELWKAISPHLSPLS- 239
Query 219 ARISSIPVEYVLAFVEGSNMGQMMGNLAMRSLTP-TLKGPLELLPNAVR----------- 266
I S+ +V G +M + ++ ++ P + N V+
Sbjct 240 -NIVSMLNNHVSMTNSGVSMASTLHSM-LKGFAPAAAQAVETAAQNGVQAMSSLGSQLGS 297
Query 267 --------PAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP----TSAPGGPSGTS 313
V+A LG A ++G LSVP +W A++++TP A+A+P TSA G
Sbjct 298 SLGSSGLGAGVAANLGRAASVGSLSVPQAWAAANQAVTPAARALPLTSLTSAAQTAPGHM 357
Query 314 WAQLGLASL--AGGAVGAV--AART--RSGVILRSPAAG 346
L L L +GG G V A R R+ V+ R PAAG
Sbjct 358 LGGLPLGQLTNSGGGFGGVSNALRMPPRAYVMPRVPAAG 396
>gi|240170866|ref|ZP_04749525.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=351
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/296 (39%), Positives = 139/296 (47%), Gaps = 35/296 (11%)
Query 1 MDFTIFPPEFNSLNIQGS--ARPFLVAANAWKNLSNELSYAASRFESEINGLITSWRGPS 58
MDF PPE NS + A P L AA AW L+ EL AA S I L +W+G +
Sbjct 1 MDFGSLPPEVNSGRMYCGLGAGPMLAAATAWDELAAELHSAADAHRSAIMALTATWQGCA 60
Query 59 STIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLALA 118
ST MA+A A AW+ TA+ AEL A H AYEAA AA VP PVI NR L
Sbjct 61 STSMASAAAHHVAWLSATAAHAELTATHARAAVSAYEAAFAATVPPPVIAANRALLATLV 120
Query 119 TTNIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAAAARLTPFSPPAPIANPGALAR 178
TNI G + PAI A +A Y Q W+QD M YA + AA R TPF+ P N LA
Sbjct 121 ATNILGQNGPAIAATEARYGQMWAQDAATMYAYAASSDAATRHTPFAWPPRTTNTAGLA- 179
Query 179 LYELIGSVSETVGSFAAPATKNLPSKLWTLLTKGTYPLTAARISS--IPVEYVLAFVEGS 236
S + +VG A T+ ++ L ISS I V +L FV G
Sbjct 180 ------SHAASVGQAAGAETQQ-------IVHAAVVTLQTLNISSTVISVLSLLCFVPG- 225
Query 237 NMGQMMGNLAMRSLTPTLKGPLELLPN-------AVRPAVSATLGNADTIGGLSVP 285
A+R LT + ++P V VSA LG A +GGLSVP
Sbjct 226 ---------ALRDLTMPAGMTVGMVPTQGAADTVKVGGTVSAGLGQATRVGGLSVP 272
>gi|15841278|ref|NP_336315.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|13881506|gb|AAK46129.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
Length=386
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 118/344 (35%), Positives = 161/344 (47%), Gaps = 51/344 (14%)
Query 39 AASRFESEINGL-ITSWRGPSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAA 97
AA+ + S I GL + W GPSS MAAAVAP+ AWI TA AE + AG YE A
Sbjct 18 AAASYGSTIEGLTVAPWMGPSSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETA 77
Query 98 HAAHVPLPVIETNRLTRLALATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAA 157
AA VP PVIE NR ++L TNIFG +TPAI A +A YA+ W+QD AM YA +A
Sbjct 78 FAATVPPPVIEANRALLMSLVATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSAT 137
Query 158 AARLTPFSPPAPIANPGA--------------------LARLYELIGSVSETVGSFAAPA 197
A++L PFS P NP A A+L +LI + T+ S A A
Sbjct 138 ASQLAPFSEPPQTTNPSATAAQSAVVAQAAGAAASSDITAQLSQLISLLPSTLQSLATTA 197
Query 198 TKNLPSKLW--------TLLTKGTYPLTAARISSIPVEYVLAFVEGSNMGQ-------MM 242
T S W T+L T P + + +IP + L F + + Q ++
Sbjct 198 TATSASAGWDTVLQSITTILANLTGPYSIIGLGAIPGGWWLTFGQILGLAQNAPGVAALL 257
Query 243 G-NLAMRSLTPT--LKGPLELLPNAVRPAVSATLGNADTIGGLSVPPSWVADKSITPLAK 299
G A +L+P L+G + + + A +G LSVP W P+ +
Sbjct 258 GPKAAAGALSPLAPLRGGYIGDITPLGGGATGGIARAIYVGSLSVPQGW---AEAAPVMR 314
Query 300 AVPTSAPG---------GPSGTSWAQLGLASLAGGAVGAVAART 334
AV + PG G + ++ L+SLAG A+ A R+
Sbjct 315 AVASVLPGTGAAPALAAEAPGALFGEMALSSLAGRALAGTAVRS 358
>gi|254550816|ref|ZP_05141263.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|297634368|ref|ZP_06952148.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|297731355|ref|ZP_06960473.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
gi|313658689|ref|ZP_07815569.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
Length=395
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 118/344 (35%), Positives = 161/344 (47%), Gaps = 51/344 (14%)
Query 39 AASRFESEINGL-ITSWRGPSSTIMAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAA 97
AA+ + S I GL + W GPSS MAAAVAP+ AWI TA AE + AG YE A
Sbjct 27 AAASYGSTIEGLTVAPWMGPSSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETA 86
Query 98 HAAHVPLPVIETNRLTRLALATTNIFGIHTPAIFALDALYAQYWSQDGEAMNLYATMAAA 157
AA VP PVIE NR ++L TNIFG +TPAI A +A YA+ W+QD AM YA +A
Sbjct 87 FAATVPPPVIEANRALLMSLVATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSAT 146
Query 158 AARLTPFSPPAPIANPGA--------------------LARLYELIGSVSETVGSFAAPA 197
A++L PFS P NP A A+L +LI + T+ S A A
Sbjct 147 ASQLAPFSEPPQTTNPSATAAQSAVVAQAAGAAASSDITAQLSQLISLLPSTLQSLATTA 206
Query 198 TKNLPSKLW--------TLLTKGTYPLTAARISSIPVEYVLAFVEGSNMGQ-------MM 242
T S W T+L T P + + +IP + L F + + Q ++
Sbjct 207 TATSASAGWDTVLQSITTILANLTGPYSIIGLGAIPGGWWLTFGQILGLAQNAPGVAALL 266
Query 243 G-NLAMRSLTPT--LKGPLELLPNAVRPAVSATLGNADTIGGLSVPPSWVADKSITPLAK 299
G A +L+P L+G + + + A +G LSVP W P+ +
Sbjct 267 GPKAAAGALSPLAPLRGGYIGDITPLGGGATGGIARAIYVGSLSVPQGW---AEAAPVMR 323
Query 300 AVPTSAPG---------GPSGTSWAQLGLASLAGGAVGAVAART 334
AV + PG G + ++ L+SLAG A+ A R+
Sbjct 324 AVASVLPGTGAAPALAAEAPGALFGEMALSSLAGRALAGTAVRS 367
>gi|308376701|ref|ZP_07439733.2| PPE family protein [Mycobacterium tuberculosis SUMu008]
gi|308350282|gb|EFP39133.1| PPE family protein [Mycobacterium tuberculosis SUMu008]
Length=405
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 134/394 (35%), Positives = 188/394 (48%), Gaps = 57/394 (14%)
Query 6 FPPEFNSLNIQ---GSARPFLVAANAWKNLSNELSYAASRFESEINGLIT-SWRGPSSTI 61
PPE NS + GSA + AA W +++++L AAS F+S + GL T SW G S+ +
Sbjct 16 LPPEINSARMYAGPGSAS-LVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIGSSAGL 74
Query 62 MAAAVAPFRAWIVTTASLAELVADHISVVAGAYEAAHAAHVPLPVIETNRLTRLALATTN 121
M AA +P+ AW+ TA AEL A + V A AYE A+ VP PVI NR + L TN
Sbjct 75 MVAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMILIATN 134
Query 122 IFGIHTPAIFALDALYAQYWSQDGEAMNLY-ATMAAAAARLTPFSPPAPIANPGAL---- 176
+ G +TPAI +A Y + W+QD AM Y AT A A L PF I NPG L
Sbjct 135 LLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGGLLEQA 194
Query 177 ---------ARLYELIGSVSETVGSFAAPATKNLP----SKLWTLLTKGTYPLTAARISS 223
A +L+ +V + + A P P S+LW ++ PL+ I S
Sbjct 195 VAVEEAIDTAAANQLMNNVPQALQQLAQPTKSIWPFDQLSELWKAISPHLSPLS--NIVS 252
Query 224 IPVEYVLAFVEGSNMGQMMGNLAMRSLTP-TLKGPLELLPNAVR---------------- 266
+ +V G +M + ++ ++ P + N V+
Sbjct 253 MLNNHVSMTNSGVSMASTLHSM-LKGFAPAAAQAVETAAQNGVQAMSSLGSQLGSSLGSS 311
Query 267 ---PAVSATLGNADTIGGLSVPPSW-VADKSITPLAKAVP----TSAPGGPSGTSWAQLG 318
V+A LG A ++G LSVPP+W A++++TP A+A+P TSA G L
Sbjct 312 GLGAGVAANLGRAASVGSLSVPPAWAAANQAVTPAARALPLTSLTSAAQTAPGHMLGGLP 371
Query 319 LASL--AGGAVGAV--AART--RSGVILRSPAAG 346
L L +GG G V A R R+ V+ R PAAG
Sbjct 372 LGQLTNSGGGFGGVSNALRMPPRAYVMPRVPAAG 405
Lambda K H
0.316 0.129 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 636071322808
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40