BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1169c

Length=100
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15840612|ref|NP_335649.1|  PE family protein [Mycobacterium tu...   204    2e-51
gi|31792363|ref|NP_854856.1|  PE family protein [Mycobacterium bo...   203    6e-51
gi|339631235|ref|YP_004722877.1|  PE family protein [Mycobacteriu...   202    2e-50
gi|342861310|ref|ZP_08717958.1|  hypothetical protein MCOL_20601 ...  80.9    6e-14
gi|183984754|ref|YP_001853045.1|  PE-PGRS family protein [Mycobac...  78.6    3e-13
gi|254820293|ref|ZP_05225294.1|  hypothetical protein MintA_10211...  77.4    7e-13
gi|254775399|ref|ZP_05216915.1|  hypothetical protein MaviaA2_121...  76.3    1e-12
gi|342861305|ref|ZP_08717953.1|  hypothetical protein MCOL_20576 ...  74.7    4e-12
gi|41407605|ref|NP_960441.1|  hypothetical protein MAP1507 [Mycob...  74.7    4e-12
gi|342861297|ref|ZP_08717945.1|  hypothetical protein MCOL_20536 ...  74.3    6e-12
gi|296170606|ref|ZP_06852185.1|  PE family protein [Mycobacterium...  73.9    6e-12
gi|333989636|ref|YP_004522250.1|  PE family protein PE8 [Mycobact...  73.2    1e-11
gi|118618467|ref|YP_906799.1|  PE family protein [Mycobacterium u...  72.0    3e-11
gi|183982680|ref|YP_001850971.1|  PE family protein, PE19 [Mycoba...  71.2    5e-11
gi|333989643|ref|YP_004522257.1|  PE-PGRS family protein [Mycobac...  70.9    6e-11
gi|254774223|ref|ZP_05215739.1|  PE family protein [Mycobacterium...  70.5    8e-11
gi|41408674|ref|NP_961510.1|  hypothetical protein MAP2576c [Myco...  69.7    1e-10
gi|240172899|ref|ZP_04751558.1|  PE family protein [Mycobacterium...  68.2    4e-10
gi|183982677|ref|YP_001850968.1|  PE family protein, PE19_1 [Myco...  67.8    5e-10
gi|254822878|ref|ZP_05227879.1|  PE family protein [Mycobacterium...  67.8    5e-10
gi|212596283|gb|ACJ35566.1|  PE5 [Mycobacterium intracellulare AT...  67.4    7e-10
gi|254775390|ref|ZP_05216906.1|  hypothetical protein MaviaA2_120...  66.6    1e-09
gi|118465345|ref|YP_882101.1|  PE family protein [Mycobacterium a...  66.2    1e-09
gi|118618471|ref|YP_906803.1|  PE family protein [Mycobacterium u...  66.2    1e-09
gi|240173524|ref|ZP_04752182.1|  PE family protein, PE19_1 [Mycob...  65.9    2e-09
gi|118616216|ref|YP_904548.1|  PE-PGRS family protein family prot...  65.5    2e-09
gi|296164779|ref|ZP_06847341.1|  PE family protein [Mycobacterium...  65.1    4e-09
gi|41407612|ref|NP_960448.1|  hypothetical protein MAP1514 [Mycob...  64.7    4e-09
gi|342862086|ref|ZP_08718729.1|  PE family protein [Mycobacterium...  64.7    5e-09
gi|183981962|ref|YP_001850253.1|  PE family protein [Mycobacteriu...  64.3    6e-09
gi|333989806|ref|YP_004522420.1|  PE family protein PE19 [Mycobac...  63.9    7e-09
gi|240169038|ref|ZP_04747697.1|  hypothetical protein MkanA1_0697...  63.9    7e-09
gi|15841256|ref|NP_336293.1|  PE family protein [Mycobacterium tu...  63.2    1e-08
gi|240172414|ref|ZP_04751073.1|  PE family protein, PE19_1 [Mycob...  63.2    1e-08
gi|240170799|ref|ZP_04749458.1|  PE-PGRS family protein [Mycobact...  62.8    2e-08
gi|240172420|ref|ZP_04751079.1|  PE family protein, PE19_1 [Mycob...  62.8    2e-08
gi|15843089|ref|NP_338126.1|  PE family protein [Mycobacterium tu...  61.6    3e-08
gi|254364620|ref|ZP_04980666.1|  PE family protein [Mycobacterium...  61.2    4e-08
gi|296164186|ref|ZP_06846786.1|  PE family protein [Mycobacterium...  61.2    5e-08
gi|31792979|ref|NP_855472.1|  PE family protein [Mycobacterium bo...  60.5    8e-08
gi|15841261|ref|NP_336298.1|  PE family protein [Mycobacterium tu...  60.5    8e-08
gi|289448776|ref|ZP_06438520.1|  PE-PGRS family protein [Mycobact...  60.5    8e-08
gi|340628088|ref|YP_004746540.1|  PE-PGRS family protein [Mycobac...  60.5    8e-08
gi|31794276|ref|NP_856769.1|  PE-PGRS family protein [Mycobacteri...  60.5    8e-08
gi|333990542|ref|YP_004523156.1|  PE-PGRS family protein [Mycobac...  60.1    1e-07
gi|240173303|ref|ZP_04751961.1|  PE family protein [Mycobacterium...  60.1    1e-07
gi|15842668|ref|NP_337705.1|  PE family protein [Mycobacterium tu...  60.1    1e-07
gi|254233720|ref|ZP_04927045.1|  PE-PGRS family protein, probably...  60.1    1e-07
gi|57117054|ref|YP_177924.1|  triacylglycerol lipase [Mycobacteri...  60.1    1e-07
gi|31794651|ref|NP_857144.1|  PE family protein [Mycobacterium bo...  59.7    1e-07


>gi|15840612|ref|NP_335649.1| PE family protein [Mycobacterium tuberculosis CDC1551]
 gi|148822385|ref|YP_001287139.1| PE family protein [Mycobacterium tuberculosis F11]
 gi|253799787|ref|YP_003032788.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
 12 more sequence titles
 Length=106

 Score =  204 bits (520),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 100/100 (100%), Positives = 100/100 (100%), Gaps = 0/100 (0%)

Query  1    VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
            VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE
Sbjct  7    VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  66

Query  61   LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTST  100
            LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTST
Sbjct  67   LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTST  106


>gi|31792363|ref|NP_854856.1| PE family protein [Mycobacterium bovis AF2122/97]
 gi|57116837|ref|YP_177792.1| PE family protein [Mycobacterium tuberculosis H37Rv]
 gi|121637101|ref|YP_977324.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 63 more sequence titles
 Length=100

 Score =  203 bits (517),  Expect = 6e-51, Method: Compositional matrix adjust.
 Identities = 99/100 (99%), Positives = 100/100 (100%), Gaps = 0/100 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE
Sbjct  1   MSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTST  100
           LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTST
Sbjct  61  LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTST  100


>gi|339631235|ref|YP_004722877.1| PE family protein [Mycobacterium africanum GM041182]
 gi|339330591|emb|CCC26259.1| PE family protein [Mycobacterium africanum GM041182]
Length=100

 Score =  202 bits (513),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 98/100 (98%), Positives = 99/100 (99%), Gaps = 0/100 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           + FVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE
Sbjct  1   MCFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTST  100
           LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTST
Sbjct  61  LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTST  100


>gi|342861310|ref|ZP_08717958.1| hypothetical protein MCOL_20601 [Mycobacterium colombiense CECT 
3035]
 gi|342131210|gb|EGT84491.1| hypothetical protein MCOL_20601 [Mycobacterium colombiense CECT 
3035]
Length=99

 Score = 80.9 bits (198),  Expect = 6e-14, Method: Compositional matrix adjust.
 Identities = 41/91 (46%), Positives = 57/91 (63%), Gaps = 0/91 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFVTT+P+++   A NL  IG T+SA +       T V   A D VS +T+  F+ HG+
Sbjct  1   MSFVTTQPEALAAAAGNLQTIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHGQ  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSYWLTE  91
           +Y+A++ QA  IHE FV TL TS  SY +TE
Sbjct  61  MYQAVSAQAAAIHEMFVNTLSTSSGSYAVTE  91


>gi|183984754|ref|YP_001853045.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183178080|gb|ACC43190.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=99

 Score = 78.6 bits (192),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 41/94 (44%), Positives = 56/94 (60%), Gaps = 0/94 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           ++FVT+ P+++   A NLH +G  MSA +      IT V   A D VS +T+  F+ HG 
Sbjct  1   MAFVTSAPEALTAAALNLHSVGAGMSAGNAAAMAPITGVVPAAADEVSALTAAHFAAHGA  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSYWLTELAN  94
           +Y+ ++ QA  IHE FV TLQ S  SY  TE AN
Sbjct  61  MYQTLSAQAQAIHEMFVTTLQASGGSYAETEAAN  94


>gi|254820293|ref|ZP_05225294.1| hypothetical protein MintA_10211 [Mycobacterium intracellulare 
ATCC 13950]
 gi|212596298|gb|ACJ35567.1| PE7 [Mycobacterium intracellulare ATCC 13950]
Length=99

 Score = 77.4 bits (189),  Expect = 7e-13, Method: Compositional matrix adjust.
 Identities = 38/87 (44%), Positives = 54/87 (63%), Gaps = 0/87 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFVTT+P+++   A NL  IG T+SA +       T V   A D VS +T+  F+ H +
Sbjct  1   MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSY  87
           +Y+A++ QA  IHE+FV TL TS  SY
Sbjct  61  MYQAVSAQAQAIHEAFVNTLSTSSGSY  87


>gi|254775399|ref|ZP_05216915.1| hypothetical protein MaviaA2_12121 [Mycobacterium avium subsp. 
avium ATCC 25291]
 gi|212595819|gb|ACJ35525.1| PE7 [Mycobacterium avium subsp. avium]
 gi|336457654|gb|EGO36658.1| PE family protein [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=99

 Score = 76.3 bits (186),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 38/87 (44%), Positives = 54/87 (63%), Gaps = 0/87 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFVTT+P+++   A NL  IG T+SA +       T V   A D VS +T+  F+ H +
Sbjct  1   MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSY  87
           +Y+A++ QA  IHE+FV TL TS  SY
Sbjct  61  MYQAVSAQAAAIHEAFVNTLSTSSGSY  87


>gi|342861305|ref|ZP_08717953.1| hypothetical protein MCOL_20576 [Mycobacterium colombiense CECT 
3035]
 gi|342131205|gb|EGT84486.1| hypothetical protein MCOL_20576 [Mycobacterium colombiense CECT 
3035]
Length=99

 Score = 74.7 bits (182),  Expect = 4e-12, Method: Compositional matrix adjust.
 Identities = 38/87 (44%), Positives = 53/87 (61%), Gaps = 0/87 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFVTT+P+++   A NL  IG T+SA +       T V   A D VS +T+  F+ H +
Sbjct  1   MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSY  87
           +Y+A++ QA  IHE FV TL TS  SY
Sbjct  61  MYQAVSAQAAAIHEMFVNTLSTSSGSY  87


>gi|41407605|ref|NP_960441.1| hypothetical protein MAP1507 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41395958|gb|AAS03824.1| PE_4 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|225698451|gb|ACO07343.1| PE protein [Mycobacterium avium subsp. paratuberculosis]
Length=99

 Score = 74.7 bits (182),  Expect = 4e-12, Method: Compositional matrix adjust.
 Identities = 37/87 (43%), Positives = 54/87 (63%), Gaps = 0/87 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFVTT+P+++   A NL  IG T+SA +       T V   A D VS +T+  F+ + +
Sbjct  1   MSFVTTQPEALAAAAGNLQAIGWTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAYAQ  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSY  87
           +Y+A++ QA  IHE+FV TL TS  SY
Sbjct  61  MYQAVSAQAAAIHEAFVNTLSTSSVSY  87


>gi|342861297|ref|ZP_08717945.1| hypothetical protein MCOL_20536 [Mycobacterium colombiense CECT 
3035]
 gi|342131197|gb|EGT84478.1| hypothetical protein MCOL_20536 [Mycobacterium colombiense CECT 
3035]
Length=99

 Score = 74.3 bits (181),  Expect = 6e-12, Method: Compositional matrix adjust.
 Identities = 36/87 (42%), Positives = 56/87 (65%), Gaps = 0/87 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           ++FVT +P+S+   A+ LHEIG  ++A +      +T V   A D VS++T+  F+ HG+
Sbjct  1   MNFVTAQPESLDIAASRLHEIGSALTAQNSATAAPMTGVAPAAADEVSLLTAAQFARHGQ  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSY  87
            ++A++ QA  IHE+FV TLQ S  SY
Sbjct  61  TFQALSAQAAAIHENFVTTLQVSAGSY  87


>gi|296170606|ref|ZP_06852185.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295894738|gb|EFG74468.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=99

 Score = 73.9 bits (180),  Expect = 6e-12, Method: Compositional matrix adjust.
 Identities = 37/87 (43%), Positives = 53/87 (61%), Gaps = 0/87 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFVTT+P+++   A NL  IG T+SA +       T V   A D VS +T+  F+ H +
Sbjct  1   MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSY  87
           +Y+A++ QA  IHE+FV TL  S  SY
Sbjct  61  MYQAVSAQAAAIHEAFVNTLSMSSGSY  87


>gi|333989636|ref|YP_004522250.1| PE family protein PE8 [Mycobacterium sp. JDM601]
 gi|333485604|gb|AEF34996.1| PE family protein PE8 [Mycobacterium sp. JDM601]
Length=273

 Score = 73.2 bits (178),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 37/91 (41%), Positives = 54/91 (60%), Gaps = 0/91 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFVTT P+++  TA+NL  IG  M+A +       T +     D VS++ +  F+ +G+
Sbjct  1   MSFVTTHPEAMAATASNLQAIGSAMTAQNTAAAAPTTGIAPAGADEVSVLQATQFAAYGQ  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSYWLTE  91
           LY+ I+ QA  I E FV TL+TS  SY  TE
Sbjct  61  LYQQISAQAAAIQEMFVNTLRTSADSYGSTE  91


>gi|118618467|ref|YP_906799.1| PE family protein [Mycobacterium ulcerans Agy99]
 gi|118570577|gb|ABL05328.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=99

 Score = 72.0 bits (175),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 41/87 (48%), Positives = 55/87 (64%), Gaps = 0/87 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFVTT+P+++   AANL  IG TMSA +       T V   A D VS +T+  F+ H +
Sbjct  1   MSFVTTQPEALAAAAANLQGIGTTMSAQNAAAAAPTTGVVPAAADEVSALTAAQFAGHAQ  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSY  87
           +Y+A++ QA VIHE FV TL TS  SY
Sbjct  61  MYQAVSAQAAVIHEMFVNTLATSSGSY  87


>gi|183982680|ref|YP_001850971.1| PE family protein, PE19 [Mycobacterium marinum M]
 gi|183176006|gb|ACC41116.1| PE family protein, PE19 [Mycobacterium marinum M]
Length=99

 Score = 71.2 bits (173),  Expect = 5e-11, Method: Compositional matrix adjust.
 Identities = 40/87 (46%), Positives = 54/87 (63%), Gaps = 0/87 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFVTT+P+++   AANL  IG TMSA +       T V   A D VS +T+  F+ H +
Sbjct  1   MSFVTTQPEALAAAAANLQGIGTTMSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSY  87
           +Y+A++ QA  IHE FV TL TS  SY
Sbjct  61  MYQAVSAQAAAIHEMFVNTLATSSGSY  87


>gi|333989643|ref|YP_004522257.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
 gi|333485611|gb|AEF35003.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
Length=99

 Score = 70.9 bits (172),  Expect = 6e-11, Method: Compositional matrix adjust.
 Identities = 36/87 (42%), Positives = 51/87 (59%), Gaps = 0/87 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFVTT+P+++   A NL  IG  ++A +   +   T V   A D VS +T+  F+ H  
Sbjct  1   MSFVTTQPEALAAAAGNLQAIGSALNAQNAAASAPTTGVVPAAADEVSALTAAQFATHAT  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSY  87
           LY+++A QA  IHE FV TL  S  SY
Sbjct  61  LYQSVAAQAAAIHEMFVATLNGSAESY  87


>gi|254774223|ref|ZP_05215739.1| PE family protein [Mycobacterium avium subsp. avium ATCC 25291]
Length=173

 Score = 70.5 bits (171),  Expect = 8e-11, Method: Compositional matrix adjust.
 Identities = 38/99 (39%), Positives = 57/99 (58%), Gaps = 0/99 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFVTTRP+++   A+ L  +G +M A +       T++   A D VS + +  FS +G 
Sbjct  1   MSFVTTRPEALLAVASMLEGLGSSMDAQNAAAAAPTTSIAPAAADEVSALQAAQFSAYGT  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTS  99
            Y+ ++ QA  IH++ VQ L T+  SY  TE ANR  TS
Sbjct  61  WYQQVSAQAKAIHQTLVQNLDTNADSYGATEAANRVNTS  99


>gi|41408674|ref|NP_961510.1| hypothetical protein MAP2576c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118463687|ref|YP_880590.1| PE family protein [Mycobacterium avium 104]
 gi|41397032|gb|AAS04893.1| PE_6 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118164974|gb|ABK65871.1| PE family protein [Mycobacterium avium 104]
 gi|212595794|gb|ACJ35523.1| PE5 [Mycobacterium avium subsp. avium]
Length=278

 Score = 69.7 bits (169),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 38/99 (39%), Positives = 57/99 (58%), Gaps = 0/99 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFVTTRP+++   A+ L  +G +M A +       T++   A D VS + +  FS +G 
Sbjct  1   MSFVTTRPEALLAVASMLEGLGSSMDAQNAAAAAPTTSIAPAAADEVSALQAAQFSAYGT  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTS  99
            Y+ ++ QA  IH++ VQ L T+  SY  TE ANR  TS
Sbjct  61  WYQQVSAQAKAIHQTLVQNLDTNADSYGATEAANRVNTS  99


>gi|240172899|ref|ZP_04751558.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=99

 Score = 68.2 bits (165),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 33/87 (38%), Positives = 52/87 (60%), Gaps = 0/87 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           ++FV T+P+++   A NL EIG  +SA +   +   T+V   A D VS +T+  FS H +
Sbjct  1   MTFVVTQPETLAAAAGNLQEIGSAVSAQNVAASAHTTSVTPAAADQVSALTAARFSAHAQ  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSY  87
           +Y+ ++ QA  IH++FV  L  S  SY
Sbjct  61  VYQVVSAQAAAIHQAFVAALTASANSY  87


>gi|183982677|ref|YP_001850968.1| PE family protein, PE19_1 [Mycobacterium marinum M]
 gi|183176003|gb|ACC41113.1| PE family protein, PE19_1 [Mycobacterium marinum M]
Length=99

 Score = 67.8 bits (164),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 34/87 (40%), Positives = 52/87 (60%), Gaps = 0/87 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +S+VTT+P+++   A+ L  IG T+S+ +       T V   A D VS +T+  F+ H +
Sbjct  1   MSYVTTQPEALAAAASTLQGIGSTLSSQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSY  87
           +Y+A++ QA  IHE FV TL  S  SY
Sbjct  61  MYQAVSAQASAIHEMFVNTLGISSGSY  87


>gi|254822878|ref|ZP_05227879.1| PE family protein [Mycobacterium intracellulare ATCC 13950]
Length=176

 Score = 67.8 bits (164),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 36/95 (38%), Positives = 54/95 (57%), Gaps = 0/95 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFVTTRP+++   A+ L  +G +M A +       T++   A D VS + +  FS +G 
Sbjct  1   MSFVTTRPEALMAAASMLEALGSSMDAQNAAAAAPTTSIAPAAADEVSALQAAQFSAYGA  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANR  95
            Y+ ++ QA  IH++ V  L TS  SY  TE ANR
Sbjct  61  WYQQVSAQAKAIHQTMVNNLDTSAGSYGETETANR  95


>gi|212596283|gb|ACJ35566.1| PE5 [Mycobacterium intracellulare ATCC 13950]
Length=265

 Score = 67.4 bits (163),  Expect = 7e-10, Method: Compositional matrix adjust.
 Identities = 36/95 (38%), Positives = 54/95 (57%), Gaps = 0/95 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFVTTRP+++   A+ L  +G +M A +       T++   A D VS + +  FS +G 
Sbjct  1   MSFVTTRPEALMAAASMLEALGSSMDAQNAAAAAPTTSIAPAAADEVSALQAAQFSAYGA  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANR  95
            Y+ ++ QA  IH++ V  L TS  SY  TE ANR
Sbjct  61  WYQQVSAQAKAIHQTMVNNLDTSAGSYGETETANR  95


>gi|254775390|ref|ZP_05216906.1| hypothetical protein MaviaA2_12076 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=98

 Score = 66.6 bits (161),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 32/89 (36%), Positives = 53/89 (60%), Gaps = 0/89 (0%)

Query  3   FVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGELY  62
           +VT +P+++   A  L +IG  ++A     +  +T V   A D VS++ +  F+ HG+ +
Sbjct  2   YVTAQPEAMNAAADRLQQIGTALAAQTGANSAPMTGVVPAAADPVSLLAAARFAQHGQAF  61

Query  63  KAIARQAHVIHESFVQTLQTSKTSYWLTE  91
           +A++ +A  +HE FV TLQTS  SY  TE
Sbjct  62  QAVSAEAAAVHEMFVTTLQTSAGSYAGTE  90


>gi|118465345|ref|YP_882101.1| PE family protein [Mycobacterium avium 104]
 gi|118166632|gb|ABK67529.1| PE family protein [Mycobacterium avium 104]
 gi|212595805|gb|ACJ35524.1| PE6 [Mycobacterium avium subsp. avium]
Length=99

 Score = 66.2 bits (160),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 32/89 (36%), Positives = 53/89 (60%), Gaps = 0/89 (0%)

Query  3   FVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGELY  62
           +VT +P+++   A  L +IG  ++A     +  +T V   A D VS++ +  F+ HG+ +
Sbjct  3   YVTAQPEAMNAAADRLQQIGTALAAQTGANSAPMTGVVPAAADPVSLLAAARFAQHGQAF  62

Query  63  KAIARQAHVIHESFVQTLQTSKTSYWLTE  91
           +A++ +A  +HE FV TLQTS  SY  TE
Sbjct  63  QAVSAEAAAVHEMFVTTLQTSAGSYAGTE  91


>gi|118618471|ref|YP_906803.1| PE family protein [Mycobacterium ulcerans Agy99]
 gi|118570581|gb|ABL05332.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=99

 Score = 66.2 bits (160),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 34/87 (40%), Positives = 51/87 (59%), Gaps = 0/87 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +S+VTT+P+++   A+ L  IG T+S+ +       T V   A D VS +T+  F  H +
Sbjct  1   MSYVTTQPEALAAAASTLQGIGSTLSSQNAAAAAPTTGVVPAAADEVSALTAAQFVAHAQ  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSY  87
           +Y+A++ QA  IHE FV TL  S  SY
Sbjct  61  MYQAVSAQASAIHEMFVNTLGISSGSY  87


>gi|240173524|ref|ZP_04752182.1| PE family protein, PE19_1 [Mycobacterium kansasii ATCC 12478]
Length=99

 Score = 65.9 bits (159),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 38/87 (44%), Positives = 54/87 (63%), Gaps = 0/87 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFVTT+P+++   A++L  IG TMSA +       T V   A D VS +T+  F+ H +
Sbjct  1   MSFVTTQPEALAAAASSLQGIGTTMSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSY  87
           +Y+A++ QA  IHE FV TL TS  SY
Sbjct  61  MYQAVSAQAAAIHEMFVNTLATSSGSY  87


>gi|118616216|ref|YP_904548.1| PE-PGRS family protein family protein [Mycobacterium ulcerans 
Agy99]
 gi|118568326|gb|ABL03077.1| PE-PGRS family protein family protein [Mycobacterium ulcerans 
Agy99]
Length=99

 Score = 65.5 bits (158),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 36/91 (40%), Positives = 50/91 (55%), Gaps = 0/91 (0%)

Query  4   VTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGELYK  63
           VT+ P+++   A NLH +G   SA +      IT V   A D VS +T+  F+ HG + +
Sbjct  4   VTSAPEALTAAALNLHSVGAGTSAGNAAAMAPITGVVPAAADEVSALTAAHFAAHGAMCQ  63

Query  64  AIARQAHVIHESFVQTLQTSKTSYWLTELAN  94
            ++ QA  I+E FV TLQ    SY  TE AN
Sbjct  64  TLSAQAQAIYEMFVTTLQACGGSYAETEAAN  94


>gi|296164779|ref|ZP_06847341.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899880|gb|EFG79324.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=99

 Score = 65.1 bits (157),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 36/91 (40%), Positives = 54/91 (60%), Gaps = 0/91 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFVTT+P+++   A +L  IG  ++A +       T V   A D VS +T+  F+ H +
Sbjct  1   MSFVTTQPEALSAAAGSLQSIGSALNAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSYWLTE  91
           +Y+A++ QA  IHE FV TL  S  SY +TE
Sbjct  61  MYQAVSAQAAAIHEMFVNTLSMSSGSYAVTE  91


>gi|41407612|ref|NP_960448.1| hypothetical protein MAP1514 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41395965|gb|AAS03831.1| PE_5 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|336457563|gb|EGO36568.1| PE family protein [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=99

 Score = 64.7 bits (156),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 31/85 (37%), Positives = 51/85 (60%), Gaps = 0/85 (0%)

Query  3   FVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGELY  62
           +VT +P+++   A  L +IG  ++A     +  +T V   A D VS++ +  F+ HG+ +
Sbjct  3   YVTAQPEAMNAAADRLQQIGTALAAQTGANSAPMTGVVPAAADPVSLLAAARFAQHGQAF  62

Query  63  KAIARQAHVIHESFVQTLQTSKTSY  87
           +A++ +A  IHE FV TLQTS  SY
Sbjct  63  QAVSAEAAAIHEMFVTTLQTSAGSY  87


>gi|342862086|ref|ZP_08718729.1| PE family protein [Mycobacterium colombiense CECT 3035]
 gi|342130390|gb|EGT83705.1| PE family protein [Mycobacterium colombiense CECT 3035]
Length=268

 Score = 64.7 bits (156),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 35/99 (36%), Positives = 57/99 (58%), Gaps = 0/99 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFVTTRP+++  TA+ L  +G +M A +       T++   A D VS + +  FS +G 
Sbjct  1   MSFVTTRPEALLATASMLQALGSSMDAQNAAAAAPTTSIAPAAADEVSALQAAQFSAYGA  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTS  99
            Y+ ++ QA  +H++ V  L ++  SY  TE AN+  TS
Sbjct  61  WYQQVSAQAKAVHQTMVANLNSNAGSYGETETANKVTTS  99


>gi|183981962|ref|YP_001850253.1| PE family protein [Mycobacterium marinum M]
 gi|183175288|gb|ACC40398.1| PE family protein [Mycobacterium marinum M]
Length=267

 Score = 64.3 bits (155),  Expect = 6e-09, Method: Compositional matrix adjust.
 Identities = 35/95 (37%), Positives = 54/95 (57%), Gaps = 1/95 (1%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHD-DGVTPLITNVESPAHDLVSIVTSMLFSMHG  59
           +SF+TT+P+ +   A  L  IG TM A +   V P  T V   A D VS + + LF+ +G
Sbjct  1   MSFLTTQPEELAAAAGKLETIGATMDAENVAAVAPTTTGVIPAAADEVSALQASLFTAYG  60

Query  60  ELYKAIARQAHVIHESFVQTLQTSKTSYWLTELAN  94
            LY+ ++ +A  +++ FV+TL  S  +Y   E AN
Sbjct  61  TLYQQVSAEAATLYDMFVRTLGVSAGTYAAAETAN  95


>gi|333989806|ref|YP_004522420.1| PE family protein PE19 [Mycobacterium sp. JDM601]
 gi|333485774|gb|AEF35166.1| PE family protein PE19 [Mycobacterium sp. JDM601]
Length=99

 Score = 63.9 bits (154),  Expect = 7e-09, Method: Compositional matrix adjust.
 Identities = 33/87 (38%), Positives = 51/87 (59%), Gaps = 0/87 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFV T+P+++   A+ L  IG  ++A +       T +   A D VS +T+ LFS H +
Sbjct  1   MSFVNTQPEALASAASELRGIGSVVAAQNMAAAGPTTVLPPAAADEVSALTAALFSAHAQ  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSY  87
            Y+ ++ QA  IHE+FV+TL  S  SY
Sbjct  61  AYQEVSAQAAAIHEAFVRTLALSSESY  87


>gi|240169038|ref|ZP_04747697.1| hypothetical protein MkanA1_06979 [Mycobacterium kansasii ATCC 
12478]
Length=99

 Score = 63.9 bits (154),  Expect = 7e-09, Method: Compositional matrix adjust.
 Identities = 32/87 (37%), Positives = 48/87 (56%), Gaps = 0/87 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SF+T +PD +   AANL  +G  +SA +       T V  PA D VS + ++ F+ H  
Sbjct  1   MSFLTAQPDVLAAAAANLGSVGAALSAGNSAAAAPTTGVLPPAADEVSALVAVQFAAHAA  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSY  87
            Y+A++ +A  IH+  V TL  S  SY
Sbjct  61  TYQAVSARAAGIHDQLVATLAASAGSY  87


>gi|15841256|ref|NP_336293.1| PE family protein [Mycobacterium tuberculosis CDC1551]
 gi|31792976|ref|NP_855469.1| PE family protein [Mycobacterium bovis AF2122/97]
 gi|57116910|ref|YP_177834.1| PE family protein [Mycobacterium tuberculosis H37Rv]
 60 more sequence titles
 Length=99

 Score = 63.2 bits (152),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 35/87 (41%), Positives = 52/87 (60%), Gaps = 0/87 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFVTT+P+++   A +L  IG  ++A +       T V   A D VS +T+  F+ H +
Sbjct  1   MSFVTTQPEALAAAAGSLQGIGSALNAQNAAAATPTTGVVPAAADEVSALTAAQFAAHAQ  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSY  87
           +Y+A++ QA  IHE FV TLQ S  SY
Sbjct  61  IYQAVSAQAAAIHEMFVNTLQMSSGSY  87


>gi|240172414|ref|ZP_04751073.1| PE family protein, PE19_1 [Mycobacterium kansasii ATCC 12478]
Length=281

 Score = 63.2 bits (152),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 38/94 (41%), Positives = 53/94 (57%), Gaps = 0/94 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFV T P+ +      L  IG  +S  +      I  V   A D VS+VT+  F+ +G+
Sbjct  1   MSFVITLPEMLMAAVGRLEAIGSAVSTANVTAALPIAGVIPAAADEVSMVTAASFTAYGQ  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSYWLTELAN  94
           LY+AI+ +AH+IHE FV+ L  S  SY  TE AN
Sbjct  61  LYQAISAEAHLIHEQFVKALGLSANSYAATEAAN  94


>gi|240170799|ref|ZP_04749458.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478]
Length=99

 Score = 62.8 bits (151),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 38/87 (44%), Positives = 51/87 (59%), Gaps = 0/87 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFVT+ P+++   A NL  IG  M+A +      IT V   A D VS +T+  F+ HG 
Sbjct  1   MSFVTSEPEALISAAGNLQSIGSAMNASNAAAIAPITGVVPAAADEVSALTAAHFAAHGT  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSY  87
           LY+A++ QA  IHE FV TL  S  SY
Sbjct  61  LYQAVSAQAAAIHELFVTTLGASGGSY  87


>gi|240172420|ref|ZP_04751079.1| PE family protein, PE19_1 [Mycobacterium kansasii ATCC 12478]
Length=99

 Score = 62.8 bits (151),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 34/97 (36%), Positives = 52/97 (54%), Gaps = 0/97 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +S +TT P+ +   A  L  +G +M + +        NV  PA D VS +T+M F+ H +
Sbjct  1   MSILTTEPEMLQSAATKLQTLGSSMISRNAAAAAATMNVIPPAGDEVSALTAMHFAAHAK  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAG  97
            ++A+  +A  IHE+FV TL     SY + E  NR G
Sbjct  61  AFQAVYTRAIAIHEAFVATLAACGDSYTVVEATNRVG  97


>gi|15843089|ref|NP_338126.1| PE family protein [Mycobacterium tuberculosis CDC1551]
 gi|57117110|ref|YP_177975.1| PE family protein [Mycobacterium tuberculosis H37Rv]
 gi|121639395|ref|YP_979619.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 75 more sequence titles
 Length=98

 Score = 61.6 bits (148),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 34/90 (38%), Positives = 47/90 (53%), Gaps = 0/90 (0%)

Query  5   TTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGELYKA  64
           T +P+ +   A  L  +G T+ A +       T V  PA D VS++ +  F  H   Y+ 
Sbjct  4   TAQPEMLAAAAGELRSLGATLKASNAAAAVPTTGVVPPAADEVSLLLATQFRTHAATYQT  63

Query  65  IARQAHVIHESFVQTLQTSKTSYWLTELAN  94
            + +A VIHE FV TL TS +SY  TE AN
Sbjct  64  ASAKAAVIHEQFVTTLATSASSYADTEAAN  93


>gi|254364620|ref|ZP_04980666.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
 gi|134150134|gb|EBA42179.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
Length=99

 Score = 61.2 bits (147),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 50/85 (59%), Gaps = 0/85 (0%)

Query  3   FVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGELY  62
           FVTT+P+++   A +L  IG  ++A +       T V   A D VS +T+  F+ H ++Y
Sbjct  3   FVTTQPEALAAAAGSLQGIGSALNAQNAAAATPTTGVVPAAADEVSALTAAQFAAHAQIY  62

Query  63  KAIARQAHVIHESFVQTLQTSKTSY  87
           +A++ QA  IHE FV TLQ S  SY
Sbjct  63  QAVSAQAAAIHEMFVNTLQMSSGSY  87


>gi|296164186|ref|ZP_06846786.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295900461|gb|EFG79867.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=99

 Score = 61.2 bits (147),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 34/88 (39%), Positives = 46/88 (53%), Gaps = 0/88 (0%)

Query  4   VTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGELYK  63
           VT  P  +   A  L  IG  MSA +       T V   A D VS +T++ F+ H ++Y+
Sbjct  4   VTVDPQMLTAAAGTLQGIGSAMSAENAPAAAPTTGVVPAAADEVSALTALQFAAHAQMYQ  63

Query  64  AIARQAHVIHESFVQTLQTSKTSYWLTE  91
           A++ QA  IHE F  TL  S  SY +TE
Sbjct  64  AVSAQAAAIHEMFANTLGVSADSYAVTE  91


>gi|31792979|ref|NP_855472.1| PE family protein [Mycobacterium bovis AF2122/97]
 gi|57116913|ref|YP_177837.1| PE family protein [Mycobacterium tuberculosis H37Rv]
 gi|121637692|ref|YP_977915.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 59 more sequence titles
 Length=99

 Score = 60.5 bits (145),  Expect = 8e-08, Method: Compositional matrix adjust.
 Identities = 37/87 (43%), Positives = 52/87 (60%), Gaps = 0/87 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFVTT+P+++   AANL  IG TM+A +       T V   A D VS +T+  F+ H +
Sbjct  1   MSFVTTQPEALAAAAANLQGIGTTMNAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSY  87
           +Y+ ++ QA  IHE FV TL  S  SY
Sbjct  61  MYQTVSAQAAAIHEMFVNTLVASSGSY  87


>gi|15841261|ref|NP_336298.1| PE family protein [Mycobacterium tuberculosis CDC1551]
 gi|148823006|ref|YP_001287760.1| PE family protein [Mycobacterium tuberculosis F11]
 gi|253799168|ref|YP_003032169.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
 17 more sequence titles
 Length=105

 Score = 60.5 bits (145),  Expect = 8e-08, Method: Compositional matrix adjust.
 Identities = 37/87 (43%), Positives = 52/87 (60%), Gaps = 0/87 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFVTT+P+++   AANL  IG TM+A +       T V   A D VS +T+  F+ H +
Sbjct  7   MSFVTTQPEALAAAAANLQGIGTTMNAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ  66

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSY  87
           +Y+ ++ QA  IHE FV TL  S  SY
Sbjct  67  MYQTVSAQAAAIHEMFVNTLVASSGSY  93


>gi|289448776|ref|ZP_06438520.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289421734|gb|EFD18935.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
Length=437

 Score = 60.5 bits (145),  Expect = 8e-08, Method: Compositional matrix adjust.
 Identities = 35/94 (38%), Positives = 49/94 (53%), Gaps = 0/94 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           VS+V   P+ +   A ++  IG  ++    GV    T V + A D VS   + LFS HG+
Sbjct  2   VSYVVALPEVMSAAATDVASIGSVVATASQGVAGATTTVLAAAEDEVSAAIAALFSAHGQ  61

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSYWLTELAN  94
            Y+A++ Q  V HE FVQ L  +   Y   ELAN
Sbjct  62  DYQALSAQLAVFHERFVQALTGAAKGYAAAELAN  95


>gi|340628088|ref|YP_004746540.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340006278|emb|CCC45454.1| PE-PGRS family protein, probably triacylglycerol lipase (esterase/lipase) 
(triglyceride lipase) (tributyrase) [Mycobacterium 
canettii CIPT 140010059]
Length=437

 Score = 60.5 bits (145),  Expect = 8e-08, Method: Compositional matrix adjust.
 Identities = 35/94 (38%), Positives = 49/94 (53%), Gaps = 0/94 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           VS+V   P+ +   A ++  IG  ++    GV    T V + A D VS   + LFS HG+
Sbjct  2   VSYVVALPEVMSAAATDVASIGSVVATASQGVAGATTTVLAAAEDEVSAAIAALFSAHGQ  61

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSYWLTELAN  94
            Y+A++ Q  V HE FVQ L  +   Y   ELAN
Sbjct  62  DYQALSAQLAVFHERFVQALTGAAKGYAAAELAN  95


>gi|31794276|ref|NP_856769.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
 gi|121638982|ref|YP_979206.1| hypothetical protein BCG_3122c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224991474|ref|YP_002646163.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 26 more sequence titles
 Length=437

 Score = 60.5 bits (145),  Expect = 8e-08, Method: Compositional matrix adjust.
 Identities = 35/94 (38%), Positives = 49/94 (53%), Gaps = 0/94 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           VS+V   P+ +   A ++  IG  ++    GV    T V + A D VS   + LFS HG+
Sbjct  2   VSYVVALPEVMSAAATDVASIGSVVATASQGVAGATTTVLAAAEDEVSAAIAALFSAHGQ  61

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSYWLTELAN  94
            Y+A++ Q  V HE FVQ L  +   Y   ELAN
Sbjct  62  DYQALSAQLAVFHERFVQALTGAAKGYAAAELAN  95


>gi|333990542|ref|YP_004523156.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
 gi|333486510|gb|AEF35902.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
Length=99

 Score = 60.1 bits (144),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 34/87 (40%), Positives = 51/87 (59%), Gaps = 0/87 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SFV T+P+++   A NL  IG  +SA +       T V   A D VS +T+  F+ H  
Sbjct  1   MSFVNTQPEALTAAAGNLAAIGSALSAQNAAAATPTTGVVPAAADEVSALTAAQFAAHAS  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSY  87
           +Y++I+ QA  IH++FV TL +S  SY
Sbjct  61  MYQSISAQAEAIHQAFVATLNSSANSY  87


>gi|240173303|ref|ZP_04751961.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=146

 Score = 60.1 bits (144),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 31/87 (36%), Positives = 48/87 (56%), Gaps = 0/87 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           +SF+TT+PD +   A  L  IG TM A +       T V   A D VS++ + +F+ +G 
Sbjct  1   MSFLTTQPDELAAAAGKLQTIGATMEAENVAAAVPTTGVIPAAADEVSMLQASMFTAYGS  60

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSY  87
           LY+ I+ +A  ++E  V TL  S  +Y
Sbjct  61  LYQQISAEAAAMYEMLVNTLGVSAGTY  87


>gi|15842668|ref|NP_337705.1| PE family protein [Mycobacterium tuberculosis CDC1551]
 gi|13882987|gb|AAK47519.1| PE family protein [Mycobacterium tuberculosis CDC1551]
 gi|323718328|gb|EGB27506.1| PE-PGRS family protein [Mycobacterium tuberculosis CDC1551A]
Length=437

 Score = 60.1 bits (144),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 35/94 (38%), Positives = 49/94 (53%), Gaps = 0/94 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           VS+V   P+ +   A ++  IG  ++    GV    T V + A D VS   + LFS HG+
Sbjct  2   VSYVVALPEVMSAAATDVASIGSVVATASQGVAGATTTVLAAAEDEVSAAIAALFSGHGQ  61

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSYWLTELAN  94
            Y+A++ Q  V HE FVQ L  +   Y   ELAN
Sbjct  62  DYQALSAQLAVFHERFVQALTGAAKGYAAAELAN  95


>gi|254233720|ref|ZP_04927045.1| PE-PGRS family protein, probably triacylglycerol lipase [Mycobacterium 
tuberculosis C]
 gi|124599249|gb|EAY58353.1| PE-PGRS family protein, probably triacylglycerol lipase [Mycobacterium 
tuberculosis C]
Length=437

 Score = 60.1 bits (144),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 35/94 (38%), Positives = 49/94 (53%), Gaps = 0/94 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           VS+V   P+ +   A ++  IG  ++    GV    T V + A D VS   + LFS HG+
Sbjct  2   VSYVVALPEVMSAAATDVASIGSVVATASQGVAGATTTVLAAAEDEVSAAIAALFSGHGQ  61

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSYWLTELAN  94
            Y+A++ Q  V HE FVQ L  +   Y   ELAN
Sbjct  62  DYQALSAQLAVFHERFVQALTGAAKGYAAAELAN  95


>gi|57117054|ref|YP_177924.1| triacylglycerol lipase [Mycobacterium tuberculosis H37Rv]
 gi|148662951|ref|YP_001284474.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|148824289|ref|YP_001289043.1| hypothetical protein TBFG_13114 [Mycobacterium tuberculosis F11]
 39 more sequence titles
 Length=437

 Score = 60.1 bits (144),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 35/94 (38%), Positives = 49/94 (53%), Gaps = 0/94 (0%)

Query  1   VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE  60
           VS+V   P+ +   A ++  IG  ++    GV    T V + A D VS   + LFS HG+
Sbjct  2   VSYVVALPEVMSAAATDVASIGSVVATASQGVAGATTTVLAAAEDEVSAAIAALFSGHGQ  61

Query  61  LYKAIARQAHVIHESFVQTLQTSKTSYWLTELAN  94
            Y+A++ Q  V HE FVQ L  +   Y   ELAN
Sbjct  62  DYQALSAQLAVFHERFVQALTGAAKGYAAAELAN  95


>gi|31794651|ref|NP_857144.1| PE family protein [Mycobacterium bovis AF2122/97]
 gi|31620248|emb|CAD95691.1| PE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=98

 Score = 59.7 bits (143),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 33/90 (37%), Positives = 46/90 (52%), Gaps = 0/90 (0%)

Query  5   TTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGELYKA  64
           T +P+ +   A  L  +G T+   +       T V  PA D VS++ +  F  H   Y+ 
Sbjct  4   TAQPEMLAAAAGELRSLGATLKVSNAAAAVPTTGVVPPAADEVSLLLATQFRTHAATYQT  63

Query  65  IARQAHVIHESFVQTLQTSKTSYWLTELAN  94
            + +A VIHE FV TL TS +SY  TE AN
Sbjct  64  ASAKAAVIHEQFVTTLATSASSYADTEAAN  93



Lambda     K      H
   0.315    0.125    0.352 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 129239199826


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40