BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1169c
Length=100
Score E
Sequences producing significant alignments: (Bits) Value
gi|15840612|ref|NP_335649.1| PE family protein [Mycobacterium tu... 204 2e-51
gi|31792363|ref|NP_854856.1| PE family protein [Mycobacterium bo... 203 6e-51
gi|339631235|ref|YP_004722877.1| PE family protein [Mycobacteriu... 202 2e-50
gi|342861310|ref|ZP_08717958.1| hypothetical protein MCOL_20601 ... 80.9 6e-14
gi|183984754|ref|YP_001853045.1| PE-PGRS family protein [Mycobac... 78.6 3e-13
gi|254820293|ref|ZP_05225294.1| hypothetical protein MintA_10211... 77.4 7e-13
gi|254775399|ref|ZP_05216915.1| hypothetical protein MaviaA2_121... 76.3 1e-12
gi|342861305|ref|ZP_08717953.1| hypothetical protein MCOL_20576 ... 74.7 4e-12
gi|41407605|ref|NP_960441.1| hypothetical protein MAP1507 [Mycob... 74.7 4e-12
gi|342861297|ref|ZP_08717945.1| hypothetical protein MCOL_20536 ... 74.3 6e-12
gi|296170606|ref|ZP_06852185.1| PE family protein [Mycobacterium... 73.9 6e-12
gi|333989636|ref|YP_004522250.1| PE family protein PE8 [Mycobact... 73.2 1e-11
gi|118618467|ref|YP_906799.1| PE family protein [Mycobacterium u... 72.0 3e-11
gi|183982680|ref|YP_001850971.1| PE family protein, PE19 [Mycoba... 71.2 5e-11
gi|333989643|ref|YP_004522257.1| PE-PGRS family protein [Mycobac... 70.9 6e-11
gi|254774223|ref|ZP_05215739.1| PE family protein [Mycobacterium... 70.5 8e-11
gi|41408674|ref|NP_961510.1| hypothetical protein MAP2576c [Myco... 69.7 1e-10
gi|240172899|ref|ZP_04751558.1| PE family protein [Mycobacterium... 68.2 4e-10
gi|183982677|ref|YP_001850968.1| PE family protein, PE19_1 [Myco... 67.8 5e-10
gi|254822878|ref|ZP_05227879.1| PE family protein [Mycobacterium... 67.8 5e-10
gi|212596283|gb|ACJ35566.1| PE5 [Mycobacterium intracellulare AT... 67.4 7e-10
gi|254775390|ref|ZP_05216906.1| hypothetical protein MaviaA2_120... 66.6 1e-09
gi|118465345|ref|YP_882101.1| PE family protein [Mycobacterium a... 66.2 1e-09
gi|118618471|ref|YP_906803.1| PE family protein [Mycobacterium u... 66.2 1e-09
gi|240173524|ref|ZP_04752182.1| PE family protein, PE19_1 [Mycob... 65.9 2e-09
gi|118616216|ref|YP_904548.1| PE-PGRS family protein family prot... 65.5 2e-09
gi|296164779|ref|ZP_06847341.1| PE family protein [Mycobacterium... 65.1 4e-09
gi|41407612|ref|NP_960448.1| hypothetical protein MAP1514 [Mycob... 64.7 4e-09
gi|342862086|ref|ZP_08718729.1| PE family protein [Mycobacterium... 64.7 5e-09
gi|183981962|ref|YP_001850253.1| PE family protein [Mycobacteriu... 64.3 6e-09
gi|333989806|ref|YP_004522420.1| PE family protein PE19 [Mycobac... 63.9 7e-09
gi|240169038|ref|ZP_04747697.1| hypothetical protein MkanA1_0697... 63.9 7e-09
gi|15841256|ref|NP_336293.1| PE family protein [Mycobacterium tu... 63.2 1e-08
gi|240172414|ref|ZP_04751073.1| PE family protein, PE19_1 [Mycob... 63.2 1e-08
gi|240170799|ref|ZP_04749458.1| PE-PGRS family protein [Mycobact... 62.8 2e-08
gi|240172420|ref|ZP_04751079.1| PE family protein, PE19_1 [Mycob... 62.8 2e-08
gi|15843089|ref|NP_338126.1| PE family protein [Mycobacterium tu... 61.6 3e-08
gi|254364620|ref|ZP_04980666.1| PE family protein [Mycobacterium... 61.2 4e-08
gi|296164186|ref|ZP_06846786.1| PE family protein [Mycobacterium... 61.2 5e-08
gi|31792979|ref|NP_855472.1| PE family protein [Mycobacterium bo... 60.5 8e-08
gi|15841261|ref|NP_336298.1| PE family protein [Mycobacterium tu... 60.5 8e-08
gi|289448776|ref|ZP_06438520.1| PE-PGRS family protein [Mycobact... 60.5 8e-08
gi|340628088|ref|YP_004746540.1| PE-PGRS family protein [Mycobac... 60.5 8e-08
gi|31794276|ref|NP_856769.1| PE-PGRS family protein [Mycobacteri... 60.5 8e-08
gi|333990542|ref|YP_004523156.1| PE-PGRS family protein [Mycobac... 60.1 1e-07
gi|240173303|ref|ZP_04751961.1| PE family protein [Mycobacterium... 60.1 1e-07
gi|15842668|ref|NP_337705.1| PE family protein [Mycobacterium tu... 60.1 1e-07
gi|254233720|ref|ZP_04927045.1| PE-PGRS family protein, probably... 60.1 1e-07
gi|57117054|ref|YP_177924.1| triacylglycerol lipase [Mycobacteri... 60.1 1e-07
gi|31794651|ref|NP_857144.1| PE family protein [Mycobacterium bo... 59.7 1e-07
>gi|15840612|ref|NP_335649.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|148822385|ref|YP_001287139.1| PE family protein [Mycobacterium tuberculosis F11]
gi|253799787|ref|YP_003032788.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
12 more sequence titles
Length=106
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/100 (100%), Positives = 100/100 (100%), Gaps = 0/100 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE
Sbjct 7 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 66
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTST 100
LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTST
Sbjct 67 LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTST 106
>gi|31792363|ref|NP_854856.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57116837|ref|YP_177792.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|121637101|ref|YP_977324.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
63 more sequence titles
Length=100
Score = 203 bits (517), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 99/100 (99%), Positives = 100/100 (100%), Gaps = 0/100 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE
Sbjct 1 MSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTST 100
LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTST
Sbjct 61 LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTST 100
>gi|339631235|ref|YP_004722877.1| PE family protein [Mycobacterium africanum GM041182]
gi|339330591|emb|CCC26259.1| PE family protein [Mycobacterium africanum GM041182]
Length=100
Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/100 (98%), Positives = 99/100 (99%), Gaps = 0/100 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+ FVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE
Sbjct 1 MCFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTST 100
LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTST
Sbjct 61 LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTST 100
>gi|342861310|ref|ZP_08717958.1| hypothetical protein MCOL_20601 [Mycobacterium colombiense CECT
3035]
gi|342131210|gb|EGT84491.1| hypothetical protein MCOL_20601 [Mycobacterium colombiense CECT
3035]
Length=99
Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/91 (46%), Positives = 57/91 (63%), Gaps = 0/91 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFVTT+P+++ A NL IG T+SA + T V A D VS +T+ F+ HG+
Sbjct 1 MSFVTTQPEALAAAAGNLQTIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHGQ 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSYWLTE 91
+Y+A++ QA IHE FV TL TS SY +TE
Sbjct 61 MYQAVSAQAAAIHEMFVNTLSTSSGSYAVTE 91
>gi|183984754|ref|YP_001853045.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178080|gb|ACC43190.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=99
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/94 (44%), Positives = 56/94 (60%), Gaps = 0/94 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
++FVT+ P+++ A NLH +G MSA + IT V A D VS +T+ F+ HG
Sbjct 1 MAFVTSAPEALTAAALNLHSVGAGMSAGNAAAMAPITGVVPAAADEVSALTAAHFAAHGA 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSYWLTELAN 94
+Y+ ++ QA IHE FV TLQ S SY TE AN
Sbjct 61 MYQTLSAQAQAIHEMFVTTLQASGGSYAETEAAN 94
>gi|254820293|ref|ZP_05225294.1| hypothetical protein MintA_10211 [Mycobacterium intracellulare
ATCC 13950]
gi|212596298|gb|ACJ35567.1| PE7 [Mycobacterium intracellulare ATCC 13950]
Length=99
Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/87 (44%), Positives = 54/87 (63%), Gaps = 0/87 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFVTT+P+++ A NL IG T+SA + T V A D VS +T+ F+ H +
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSY 87
+Y+A++ QA IHE+FV TL TS SY
Sbjct 61 MYQAVSAQAQAIHEAFVNTLSTSSGSY 87
>gi|254775399|ref|ZP_05216915.1| hypothetical protein MaviaA2_12121 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|212595819|gb|ACJ35525.1| PE7 [Mycobacterium avium subsp. avium]
gi|336457654|gb|EGO36658.1| PE family protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=99
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/87 (44%), Positives = 54/87 (63%), Gaps = 0/87 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFVTT+P+++ A NL IG T+SA + T V A D VS +T+ F+ H +
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSY 87
+Y+A++ QA IHE+FV TL TS SY
Sbjct 61 MYQAVSAQAAAIHEAFVNTLSTSSGSY 87
>gi|342861305|ref|ZP_08717953.1| hypothetical protein MCOL_20576 [Mycobacterium colombiense CECT
3035]
gi|342131205|gb|EGT84486.1| hypothetical protein MCOL_20576 [Mycobacterium colombiense CECT
3035]
Length=99
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/87 (44%), Positives = 53/87 (61%), Gaps = 0/87 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFVTT+P+++ A NL IG T+SA + T V A D VS +T+ F+ H +
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSY 87
+Y+A++ QA IHE FV TL TS SY
Sbjct 61 MYQAVSAQAAAIHEMFVNTLSTSSGSY 87
>gi|41407605|ref|NP_960441.1| hypothetical protein MAP1507 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395958|gb|AAS03824.1| PE_4 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|225698451|gb|ACO07343.1| PE protein [Mycobacterium avium subsp. paratuberculosis]
Length=99
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/87 (43%), Positives = 54/87 (63%), Gaps = 0/87 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFVTT+P+++ A NL IG T+SA + T V A D VS +T+ F+ + +
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGWTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAYAQ 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSY 87
+Y+A++ QA IHE+FV TL TS SY
Sbjct 61 MYQAVSAQAAAIHEAFVNTLSTSSVSY 87
>gi|342861297|ref|ZP_08717945.1| hypothetical protein MCOL_20536 [Mycobacterium colombiense CECT
3035]
gi|342131197|gb|EGT84478.1| hypothetical protein MCOL_20536 [Mycobacterium colombiense CECT
3035]
Length=99
Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/87 (42%), Positives = 56/87 (65%), Gaps = 0/87 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
++FVT +P+S+ A+ LHEIG ++A + +T V A D VS++T+ F+ HG+
Sbjct 1 MNFVTAQPESLDIAASRLHEIGSALTAQNSATAAPMTGVAPAAADEVSLLTAAQFARHGQ 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSY 87
++A++ QA IHE+FV TLQ S SY
Sbjct 61 TFQALSAQAAAIHENFVTTLQVSAGSY 87
>gi|296170606|ref|ZP_06852185.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894738|gb|EFG74468.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=99
Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/87 (43%), Positives = 53/87 (61%), Gaps = 0/87 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFVTT+P+++ A NL IG T+SA + T V A D VS +T+ F+ H +
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSY 87
+Y+A++ QA IHE+FV TL S SY
Sbjct 61 MYQAVSAQAAAIHEAFVNTLSMSSGSY 87
>gi|333989636|ref|YP_004522250.1| PE family protein PE8 [Mycobacterium sp. JDM601]
gi|333485604|gb|AEF34996.1| PE family protein PE8 [Mycobacterium sp. JDM601]
Length=273
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/91 (41%), Positives = 54/91 (60%), Gaps = 0/91 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFVTT P+++ TA+NL IG M+A + T + D VS++ + F+ +G+
Sbjct 1 MSFVTTHPEAMAATASNLQAIGSAMTAQNTAAAAPTTGIAPAGADEVSVLQATQFAAYGQ 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSYWLTE 91
LY+ I+ QA I E FV TL+TS SY TE
Sbjct 61 LYQQISAQAAAIQEMFVNTLRTSADSYGSTE 91
>gi|118618467|ref|YP_906799.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|118570577|gb|ABL05328.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=99
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/87 (48%), Positives = 55/87 (64%), Gaps = 0/87 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFVTT+P+++ AANL IG TMSA + T V A D VS +T+ F+ H +
Sbjct 1 MSFVTTQPEALAAAAANLQGIGTTMSAQNAAAAAPTTGVVPAAADEVSALTAAQFAGHAQ 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSY 87
+Y+A++ QA VIHE FV TL TS SY
Sbjct 61 MYQAVSAQAAVIHEMFVNTLATSSGSY 87
>gi|183982680|ref|YP_001850971.1| PE family protein, PE19 [Mycobacterium marinum M]
gi|183176006|gb|ACC41116.1| PE family protein, PE19 [Mycobacterium marinum M]
Length=99
Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/87 (46%), Positives = 54/87 (63%), Gaps = 0/87 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFVTT+P+++ AANL IG TMSA + T V A D VS +T+ F+ H +
Sbjct 1 MSFVTTQPEALAAAAANLQGIGTTMSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSY 87
+Y+A++ QA IHE FV TL TS SY
Sbjct 61 MYQAVSAQAAAIHEMFVNTLATSSGSY 87
>gi|333989643|ref|YP_004522257.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
gi|333485611|gb|AEF35003.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
Length=99
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/87 (42%), Positives = 51/87 (59%), Gaps = 0/87 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFVTT+P+++ A NL IG ++A + + T V A D VS +T+ F+ H
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSALNAQNAAASAPTTGVVPAAADEVSALTAAQFATHAT 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSY 87
LY+++A QA IHE FV TL S SY
Sbjct 61 LYQSVAAQAAAIHEMFVATLNGSAESY 87
>gi|254774223|ref|ZP_05215739.1| PE family protein [Mycobacterium avium subsp. avium ATCC 25291]
Length=173
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/99 (39%), Positives = 57/99 (58%), Gaps = 0/99 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFVTTRP+++ A+ L +G +M A + T++ A D VS + + FS +G
Sbjct 1 MSFVTTRPEALLAVASMLEGLGSSMDAQNAAAAAPTTSIAPAAADEVSALQAAQFSAYGT 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTS 99
Y+ ++ QA IH++ VQ L T+ SY TE ANR TS
Sbjct 61 WYQQVSAQAKAIHQTLVQNLDTNADSYGATEAANRVNTS 99
>gi|41408674|ref|NP_961510.1| hypothetical protein MAP2576c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118463687|ref|YP_880590.1| PE family protein [Mycobacterium avium 104]
gi|41397032|gb|AAS04893.1| PE_6 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118164974|gb|ABK65871.1| PE family protein [Mycobacterium avium 104]
gi|212595794|gb|ACJ35523.1| PE5 [Mycobacterium avium subsp. avium]
Length=278
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/99 (39%), Positives = 57/99 (58%), Gaps = 0/99 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFVTTRP+++ A+ L +G +M A + T++ A D VS + + FS +G
Sbjct 1 MSFVTTRPEALLAVASMLEGLGSSMDAQNAAAAAPTTSIAPAAADEVSALQAAQFSAYGT 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTS 99
Y+ ++ QA IH++ VQ L T+ SY TE ANR TS
Sbjct 61 WYQQVSAQAKAIHQTLVQNLDTNADSYGATEAANRVNTS 99
>gi|240172899|ref|ZP_04751558.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=99
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/87 (38%), Positives = 52/87 (60%), Gaps = 0/87 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
++FV T+P+++ A NL EIG +SA + + T+V A D VS +T+ FS H +
Sbjct 1 MTFVVTQPETLAAAAGNLQEIGSAVSAQNVAASAHTTSVTPAAADQVSALTAARFSAHAQ 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSY 87
+Y+ ++ QA IH++FV L S SY
Sbjct 61 VYQVVSAQAAAIHQAFVAALTASANSY 87
>gi|183982677|ref|YP_001850968.1| PE family protein, PE19_1 [Mycobacterium marinum M]
gi|183176003|gb|ACC41113.1| PE family protein, PE19_1 [Mycobacterium marinum M]
Length=99
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/87 (40%), Positives = 52/87 (60%), Gaps = 0/87 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+S+VTT+P+++ A+ L IG T+S+ + T V A D VS +T+ F+ H +
Sbjct 1 MSYVTTQPEALAAAASTLQGIGSTLSSQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSY 87
+Y+A++ QA IHE FV TL S SY
Sbjct 61 MYQAVSAQASAIHEMFVNTLGISSGSY 87
>gi|254822878|ref|ZP_05227879.1| PE family protein [Mycobacterium intracellulare ATCC 13950]
Length=176
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/95 (38%), Positives = 54/95 (57%), Gaps = 0/95 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFVTTRP+++ A+ L +G +M A + T++ A D VS + + FS +G
Sbjct 1 MSFVTTRPEALMAAASMLEALGSSMDAQNAAAAAPTTSIAPAAADEVSALQAAQFSAYGA 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANR 95
Y+ ++ QA IH++ V L TS SY TE ANR
Sbjct 61 WYQQVSAQAKAIHQTMVNNLDTSAGSYGETETANR 95
>gi|212596283|gb|ACJ35566.1| PE5 [Mycobacterium intracellulare ATCC 13950]
Length=265
Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/95 (38%), Positives = 54/95 (57%), Gaps = 0/95 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFVTTRP+++ A+ L +G +M A + T++ A D VS + + FS +G
Sbjct 1 MSFVTTRPEALMAAASMLEALGSSMDAQNAAAAAPTTSIAPAAADEVSALQAAQFSAYGA 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANR 95
Y+ ++ QA IH++ V L TS SY TE ANR
Sbjct 61 WYQQVSAQAKAIHQTMVNNLDTSAGSYGETETANR 95
>gi|254775390|ref|ZP_05216906.1| hypothetical protein MaviaA2_12076 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=98
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/89 (36%), Positives = 53/89 (60%), Gaps = 0/89 (0%)
Query 3 FVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGELY 62
+VT +P+++ A L +IG ++A + +T V A D VS++ + F+ HG+ +
Sbjct 2 YVTAQPEAMNAAADRLQQIGTALAAQTGANSAPMTGVVPAAADPVSLLAAARFAQHGQAF 61
Query 63 KAIARQAHVIHESFVQTLQTSKTSYWLTE 91
+A++ +A +HE FV TLQTS SY TE
Sbjct 62 QAVSAEAAAVHEMFVTTLQTSAGSYAGTE 90
>gi|118465345|ref|YP_882101.1| PE family protein [Mycobacterium avium 104]
gi|118166632|gb|ABK67529.1| PE family protein [Mycobacterium avium 104]
gi|212595805|gb|ACJ35524.1| PE6 [Mycobacterium avium subsp. avium]
Length=99
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/89 (36%), Positives = 53/89 (60%), Gaps = 0/89 (0%)
Query 3 FVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGELY 62
+VT +P+++ A L +IG ++A + +T V A D VS++ + F+ HG+ +
Sbjct 3 YVTAQPEAMNAAADRLQQIGTALAAQTGANSAPMTGVVPAAADPVSLLAAARFAQHGQAF 62
Query 63 KAIARQAHVIHESFVQTLQTSKTSYWLTE 91
+A++ +A +HE FV TLQTS SY TE
Sbjct 63 QAVSAEAAAVHEMFVTTLQTSAGSYAGTE 91
>gi|118618471|ref|YP_906803.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|118570581|gb|ABL05332.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=99
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/87 (40%), Positives = 51/87 (59%), Gaps = 0/87 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+S+VTT+P+++ A+ L IG T+S+ + T V A D VS +T+ F H +
Sbjct 1 MSYVTTQPEALAAAASTLQGIGSTLSSQNAAAAAPTTGVVPAAADEVSALTAAQFVAHAQ 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSY 87
+Y+A++ QA IHE FV TL S SY
Sbjct 61 MYQAVSAQASAIHEMFVNTLGISSGSY 87
>gi|240173524|ref|ZP_04752182.1| PE family protein, PE19_1 [Mycobacterium kansasii ATCC 12478]
Length=99
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/87 (44%), Positives = 54/87 (63%), Gaps = 0/87 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFVTT+P+++ A++L IG TMSA + T V A D VS +T+ F+ H +
Sbjct 1 MSFVTTQPEALAAAASSLQGIGTTMSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSY 87
+Y+A++ QA IHE FV TL TS SY
Sbjct 61 MYQAVSAQAAAIHEMFVNTLATSSGSY 87
>gi|118616216|ref|YP_904548.1| PE-PGRS family protein family protein [Mycobacterium ulcerans
Agy99]
gi|118568326|gb|ABL03077.1| PE-PGRS family protein family protein [Mycobacterium ulcerans
Agy99]
Length=99
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/91 (40%), Positives = 50/91 (55%), Gaps = 0/91 (0%)
Query 4 VTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGELYK 63
VT+ P+++ A NLH +G SA + IT V A D VS +T+ F+ HG + +
Sbjct 4 VTSAPEALTAAALNLHSVGAGTSAGNAAAMAPITGVVPAAADEVSALTAAHFAAHGAMCQ 63
Query 64 AIARQAHVIHESFVQTLQTSKTSYWLTELAN 94
++ QA I+E FV TLQ SY TE AN
Sbjct 64 TLSAQAQAIYEMFVTTLQACGGSYAETEAAN 94
>gi|296164779|ref|ZP_06847341.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899880|gb|EFG79324.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=99
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/91 (40%), Positives = 54/91 (60%), Gaps = 0/91 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFVTT+P+++ A +L IG ++A + T V A D VS +T+ F+ H +
Sbjct 1 MSFVTTQPEALSAAAGSLQSIGSALNAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSYWLTE 91
+Y+A++ QA IHE FV TL S SY +TE
Sbjct 61 MYQAVSAQAAAIHEMFVNTLSMSSGSYAVTE 91
>gi|41407612|ref|NP_960448.1| hypothetical protein MAP1514 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395965|gb|AAS03831.1| PE_5 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336457563|gb|EGO36568.1| PE family protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=99
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/85 (37%), Positives = 51/85 (60%), Gaps = 0/85 (0%)
Query 3 FVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGELY 62
+VT +P+++ A L +IG ++A + +T V A D VS++ + F+ HG+ +
Sbjct 3 YVTAQPEAMNAAADRLQQIGTALAAQTGANSAPMTGVVPAAADPVSLLAAARFAQHGQAF 62
Query 63 KAIARQAHVIHESFVQTLQTSKTSY 87
+A++ +A IHE FV TLQTS SY
Sbjct 63 QAVSAEAAAIHEMFVTTLQTSAGSY 87
>gi|342862086|ref|ZP_08718729.1| PE family protein [Mycobacterium colombiense CECT 3035]
gi|342130390|gb|EGT83705.1| PE family protein [Mycobacterium colombiense CECT 3035]
Length=268
Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/99 (36%), Positives = 57/99 (58%), Gaps = 0/99 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFVTTRP+++ TA+ L +G +M A + T++ A D VS + + FS +G
Sbjct 1 MSFVTTRPEALLATASMLQALGSSMDAQNAAAAAPTTSIAPAAADEVSALQAAQFSAYGA 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAGTS 99
Y+ ++ QA +H++ V L ++ SY TE AN+ TS
Sbjct 61 WYQQVSAQAKAVHQTMVANLNSNAGSYGETETANKVTTS 99
>gi|183981962|ref|YP_001850253.1| PE family protein [Mycobacterium marinum M]
gi|183175288|gb|ACC40398.1| PE family protein [Mycobacterium marinum M]
Length=267
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/95 (37%), Positives = 54/95 (57%), Gaps = 1/95 (1%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHD-DGVTPLITNVESPAHDLVSIVTSMLFSMHG 59
+SF+TT+P+ + A L IG TM A + V P T V A D VS + + LF+ +G
Sbjct 1 MSFLTTQPEELAAAAGKLETIGATMDAENVAAVAPTTTGVIPAAADEVSALQASLFTAYG 60
Query 60 ELYKAIARQAHVIHESFVQTLQTSKTSYWLTELAN 94
LY+ ++ +A +++ FV+TL S +Y E AN
Sbjct 61 TLYQQVSAEAATLYDMFVRTLGVSAGTYAAAETAN 95
>gi|333989806|ref|YP_004522420.1| PE family protein PE19 [Mycobacterium sp. JDM601]
gi|333485774|gb|AEF35166.1| PE family protein PE19 [Mycobacterium sp. JDM601]
Length=99
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/87 (38%), Positives = 51/87 (59%), Gaps = 0/87 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFV T+P+++ A+ L IG ++A + T + A D VS +T+ LFS H +
Sbjct 1 MSFVNTQPEALASAASELRGIGSVVAAQNMAAAGPTTVLPPAAADEVSALTAALFSAHAQ 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSY 87
Y+ ++ QA IHE+FV+TL S SY
Sbjct 61 AYQEVSAQAAAIHEAFVRTLALSSESY 87
>gi|240169038|ref|ZP_04747697.1| hypothetical protein MkanA1_06979 [Mycobacterium kansasii ATCC
12478]
Length=99
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/87 (37%), Positives = 48/87 (56%), Gaps = 0/87 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SF+T +PD + AANL +G +SA + T V PA D VS + ++ F+ H
Sbjct 1 MSFLTAQPDVLAAAAANLGSVGAALSAGNSAAAAPTTGVLPPAADEVSALVAVQFAAHAA 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSY 87
Y+A++ +A IH+ V TL S SY
Sbjct 61 TYQAVSARAAGIHDQLVATLAASAGSY 87
>gi|15841256|ref|NP_336293.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|31792976|ref|NP_855469.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57116910|ref|YP_177834.1| PE family protein [Mycobacterium tuberculosis H37Rv]
60 more sequence titles
Length=99
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/87 (41%), Positives = 52/87 (60%), Gaps = 0/87 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFVTT+P+++ A +L IG ++A + T V A D VS +T+ F+ H +
Sbjct 1 MSFVTTQPEALAAAAGSLQGIGSALNAQNAAAATPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSY 87
+Y+A++ QA IHE FV TLQ S SY
Sbjct 61 IYQAVSAQAAAIHEMFVNTLQMSSGSY 87
>gi|240172414|ref|ZP_04751073.1| PE family protein, PE19_1 [Mycobacterium kansasii ATCC 12478]
Length=281
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/94 (41%), Positives = 53/94 (57%), Gaps = 0/94 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFV T P+ + L IG +S + I V A D VS+VT+ F+ +G+
Sbjct 1 MSFVITLPEMLMAAVGRLEAIGSAVSTANVTAALPIAGVIPAAADEVSMVTAASFTAYGQ 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSYWLTELAN 94
LY+AI+ +AH+IHE FV+ L S SY TE AN
Sbjct 61 LYQAISAEAHLIHEQFVKALGLSANSYAATEAAN 94
>gi|240170799|ref|ZP_04749458.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478]
Length=99
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/87 (44%), Positives = 51/87 (59%), Gaps = 0/87 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFVT+ P+++ A NL IG M+A + IT V A D VS +T+ F+ HG
Sbjct 1 MSFVTSEPEALISAAGNLQSIGSAMNASNAAAIAPITGVVPAAADEVSALTAAHFAAHGT 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSY 87
LY+A++ QA IHE FV TL S SY
Sbjct 61 LYQAVSAQAAAIHELFVTTLGASGGSY 87
>gi|240172420|ref|ZP_04751079.1| PE family protein, PE19_1 [Mycobacterium kansasii ATCC 12478]
Length=99
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/97 (36%), Positives = 52/97 (54%), Gaps = 0/97 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+S +TT P+ + A L +G +M + + NV PA D VS +T+M F+ H +
Sbjct 1 MSILTTEPEMLQSAATKLQTLGSSMISRNAAAAAATMNVIPPAGDEVSALTAMHFAAHAK 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSYWLTELANRAG 97
++A+ +A IHE+FV TL SY + E NR G
Sbjct 61 AFQAVYTRAIAIHEAFVATLAACGDSYTVVEATNRVG 97
>gi|15843089|ref|NP_338126.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|57117110|ref|YP_177975.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|121639395|ref|YP_979619.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
75 more sequence titles
Length=98
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/90 (38%), Positives = 47/90 (53%), Gaps = 0/90 (0%)
Query 5 TTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGELYKA 64
T +P+ + A L +G T+ A + T V PA D VS++ + F H Y+
Sbjct 4 TAQPEMLAAAAGELRSLGATLKASNAAAAVPTTGVVPPAADEVSLLLATQFRTHAATYQT 63
Query 65 IARQAHVIHESFVQTLQTSKTSYWLTELAN 94
+ +A VIHE FV TL TS +SY TE AN
Sbjct 64 ASAKAAVIHEQFVTTLATSASSYADTEAAN 93
>gi|254364620|ref|ZP_04980666.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|134150134|gb|EBA42179.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
Length=99
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (59%), Gaps = 0/85 (0%)
Query 3 FVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGELY 62
FVTT+P+++ A +L IG ++A + T V A D VS +T+ F+ H ++Y
Sbjct 3 FVTTQPEALAAAAGSLQGIGSALNAQNAAAATPTTGVVPAAADEVSALTAAQFAAHAQIY 62
Query 63 KAIARQAHVIHESFVQTLQTSKTSY 87
+A++ QA IHE FV TLQ S SY
Sbjct 63 QAVSAQAAAIHEMFVNTLQMSSGSY 87
>gi|296164186|ref|ZP_06846786.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295900461|gb|EFG79867.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=99
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/88 (39%), Positives = 46/88 (53%), Gaps = 0/88 (0%)
Query 4 VTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGELYK 63
VT P + A L IG MSA + T V A D VS +T++ F+ H ++Y+
Sbjct 4 VTVDPQMLTAAAGTLQGIGSAMSAENAPAAAPTTGVVPAAADEVSALTALQFAAHAQMYQ 63
Query 64 AIARQAHVIHESFVQTLQTSKTSYWLTE 91
A++ QA IHE F TL S SY +TE
Sbjct 64 AVSAQAAAIHEMFANTLGVSADSYAVTE 91
>gi|31792979|ref|NP_855472.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57116913|ref|YP_177837.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|121637692|ref|YP_977915.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
59 more sequence titles
Length=99
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/87 (43%), Positives = 52/87 (60%), Gaps = 0/87 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFVTT+P+++ AANL IG TM+A + T V A D VS +T+ F+ H +
Sbjct 1 MSFVTTQPEALAAAAANLQGIGTTMNAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSY 87
+Y+ ++ QA IHE FV TL S SY
Sbjct 61 MYQTVSAQAAAIHEMFVNTLVASSGSY 87
>gi|15841261|ref|NP_336298.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|148823006|ref|YP_001287760.1| PE family protein [Mycobacterium tuberculosis F11]
gi|253799168|ref|YP_003032169.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
17 more sequence titles
Length=105
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/87 (43%), Positives = 52/87 (60%), Gaps = 0/87 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFVTT+P+++ AANL IG TM+A + T V A D VS +T+ F+ H +
Sbjct 7 MSFVTTQPEALAAAAANLQGIGTTMNAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 66
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSY 87
+Y+ ++ QA IHE FV TL S SY
Sbjct 67 MYQTVSAQAAAIHEMFVNTLVASSGSY 93
>gi|289448776|ref|ZP_06438520.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
gi|289421734|gb|EFD18935.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
Length=437
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/94 (38%), Positives = 49/94 (53%), Gaps = 0/94 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
VS+V P+ + A ++ IG ++ GV T V + A D VS + LFS HG+
Sbjct 2 VSYVVALPEVMSAAATDVASIGSVVATASQGVAGATTTVLAAAEDEVSAAIAALFSAHGQ 61
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSYWLTELAN 94
Y+A++ Q V HE FVQ L + Y ELAN
Sbjct 62 DYQALSAQLAVFHERFVQALTGAAKGYAAAELAN 95
>gi|340628088|ref|YP_004746540.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340006278|emb|CCC45454.1| PE-PGRS family protein, probably triacylglycerol lipase (esterase/lipase)
(triglyceride lipase) (tributyrase) [Mycobacterium
canettii CIPT 140010059]
Length=437
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/94 (38%), Positives = 49/94 (53%), Gaps = 0/94 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
VS+V P+ + A ++ IG ++ GV T V + A D VS + LFS HG+
Sbjct 2 VSYVVALPEVMSAAATDVASIGSVVATASQGVAGATTTVLAAAEDEVSAAIAALFSAHGQ 61
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSYWLTELAN 94
Y+A++ Q V HE FVQ L + Y ELAN
Sbjct 62 DYQALSAQLAVFHERFVQALTGAAKGYAAAELAN 95
>gi|31794276|ref|NP_856769.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|121638982|ref|YP_979206.1| hypothetical protein BCG_3122c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224991474|ref|YP_002646163.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
26 more sequence titles
Length=437
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/94 (38%), Positives = 49/94 (53%), Gaps = 0/94 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
VS+V P+ + A ++ IG ++ GV T V + A D VS + LFS HG+
Sbjct 2 VSYVVALPEVMSAAATDVASIGSVVATASQGVAGATTTVLAAAEDEVSAAIAALFSAHGQ 61
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSYWLTELAN 94
Y+A++ Q V HE FVQ L + Y ELAN
Sbjct 62 DYQALSAQLAVFHERFVQALTGAAKGYAAAELAN 95
>gi|333990542|ref|YP_004523156.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
gi|333486510|gb|AEF35902.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
Length=99
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/87 (40%), Positives = 51/87 (59%), Gaps = 0/87 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SFV T+P+++ A NL IG +SA + T V A D VS +T+ F+ H
Sbjct 1 MSFVNTQPEALTAAAGNLAAIGSALSAQNAAAATPTTGVVPAAADEVSALTAAQFAAHAS 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSY 87
+Y++I+ QA IH++FV TL +S SY
Sbjct 61 MYQSISAQAEAIHQAFVATLNSSANSY 87
>gi|240173303|ref|ZP_04751961.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=146
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/87 (36%), Positives = 48/87 (56%), Gaps = 0/87 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
+SF+TT+PD + A L IG TM A + T V A D VS++ + +F+ +G
Sbjct 1 MSFLTTQPDELAAAAGKLQTIGATMEAENVAAAVPTTGVIPAAADEVSMLQASMFTAYGS 60
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSY 87
LY+ I+ +A ++E V TL S +Y
Sbjct 61 LYQQISAEAAAMYEMLVNTLGVSAGTY 87
>gi|15842668|ref|NP_337705.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|13882987|gb|AAK47519.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|323718328|gb|EGB27506.1| PE-PGRS family protein [Mycobacterium tuberculosis CDC1551A]
Length=437
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/94 (38%), Positives = 49/94 (53%), Gaps = 0/94 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
VS+V P+ + A ++ IG ++ GV T V + A D VS + LFS HG+
Sbjct 2 VSYVVALPEVMSAAATDVASIGSVVATASQGVAGATTTVLAAAEDEVSAAIAALFSGHGQ 61
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSYWLTELAN 94
Y+A++ Q V HE FVQ L + Y ELAN
Sbjct 62 DYQALSAQLAVFHERFVQALTGAAKGYAAAELAN 95
>gi|254233720|ref|ZP_04927045.1| PE-PGRS family protein, probably triacylglycerol lipase [Mycobacterium
tuberculosis C]
gi|124599249|gb|EAY58353.1| PE-PGRS family protein, probably triacylglycerol lipase [Mycobacterium
tuberculosis C]
Length=437
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/94 (38%), Positives = 49/94 (53%), Gaps = 0/94 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
VS+V P+ + A ++ IG ++ GV T V + A D VS + LFS HG+
Sbjct 2 VSYVVALPEVMSAAATDVASIGSVVATASQGVAGATTTVLAAAEDEVSAAIAALFSGHGQ 61
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSYWLTELAN 94
Y+A++ Q V HE FVQ L + Y ELAN
Sbjct 62 DYQALSAQLAVFHERFVQALTGAAKGYAAAELAN 95
>gi|57117054|ref|YP_177924.1| triacylglycerol lipase [Mycobacterium tuberculosis H37Rv]
gi|148662951|ref|YP_001284474.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148824289|ref|YP_001289043.1| hypothetical protein TBFG_13114 [Mycobacterium tuberculosis F11]
39 more sequence titles
Length=437
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/94 (38%), Positives = 49/94 (53%), Gaps = 0/94 (0%)
Query 1 VSFVTTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGE 60
VS+V P+ + A ++ IG ++ GV T V + A D VS + LFS HG+
Sbjct 2 VSYVVALPEVMSAAATDVASIGSVVATASQGVAGATTTVLAAAEDEVSAAIAALFSGHGQ 61
Query 61 LYKAIARQAHVIHESFVQTLQTSKTSYWLTELAN 94
Y+A++ Q V HE FVQ L + Y ELAN
Sbjct 62 DYQALSAQLAVFHERFVQALTGAAKGYAAAELAN 95
>gi|31794651|ref|NP_857144.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|31620248|emb|CAD95691.1| PE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=98
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/90 (37%), Positives = 46/90 (52%), Gaps = 0/90 (0%)
Query 5 TTRPDSIGETAANLHEIGVTMSAHDDGVTPLITNVESPAHDLVSIVTSMLFSMHGELYKA 64
T +P+ + A L +G T+ + T V PA D VS++ + F H Y+
Sbjct 4 TAQPEMLAAAAGELRSLGATLKVSNAAAAVPTTGVVPPAADEVSLLLATQFRTHAATYQT 63
Query 65 IARQAHVIHESFVQTLQTSKTSYWLTELAN 94
+ +A VIHE FV TL TS +SY TE AN
Sbjct 64 ASAKAAVIHEQFVTTLATSASSYADTEAAN 93
Lambda K H
0.315 0.125 0.352
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129239199826
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40