BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1174c Length=110 Score E Sequences producing significant alignments: (Bits) Value gi|15608314|ref|NP_215690.1| low molecular weight T-cell antigen... 213 8e-54 gi|240171690|ref|ZP_04750349.1| putative antigen [Mycobacterium ... 179 2e-43 gi|183984250|ref|YP_001852541.1| putative antigen [Mycobacterium... 177 7e-43 gi|118616769|ref|YP_905101.1| putative antigen [Mycobacterium ul... 172 2e-41 gi|167970145|ref|ZP_02552422.1| low molecular weight T-cell anti... 157 4e-37 gi|254818771|ref|ZP_05223772.1| hypothetical protein MintA_02544... 140 4e-32 gi|296170062|ref|ZP_06851665.1| low molecular weight T-cell anti... 132 1e-29 gi|41408707|ref|NP_961543.1| hypothetical protein MAP2609 [Mycob... 130 8e-29 gi|342862064|ref|ZP_08718707.1| hypothetical protein MCOL_24356 ... 127 5e-28 gi|333990201|ref|YP_004522815.1| antigen [Mycobacterium sp. JDM6... 117 8e-25 gi|169629574|ref|YP_001703223.1| hypothetical protein MAB_2488c ... 107 4e-22 gi|118473331|ref|YP_889060.1| hypothetical protein MSMEG_4804 [M... 104 5e-21 gi|169631775|ref|YP_001705424.1| hypothetical protein MAB_4702c ... 101 3e-20 gi|333991736|ref|YP_004524350.1| antigen [Mycobacterium sp. JDM6... 99.8 1e-19 gi|169631192|ref|YP_001704841.1| hypothetical protein MAB_4114 [... 95.9 2e-18 gi|254819673|ref|ZP_05224674.1| hypothetical protein MintA_07109... 94.0 7e-18 gi|108800647|ref|YP_640844.1| hypothetical protein Mmcs_3682 [My... 93.2 1e-17 gi|342859834|ref|ZP_08716487.1| hypothetical protein MCOL_13183 ... 92.4 2e-17 gi|146760120|emb|CAJ77682.1| Rv1174c protein [Mycobacterium chel... 90.9 6e-17 gi|333991752|ref|YP_004524366.1| antigen [Mycobacterium sp. JDM6... 88.6 3e-16 gi|118462721|ref|YP_881574.1| hypothetical protein MAV_2372 [Myc... 83.6 1e-14 gi|41407963|ref|NP_960799.1| hypothetical protein MAP1865c [Myco... 82.4 2e-14 gi|336462017|gb|EGO40866.1| hypothetical protein MAPs_25160 [Myc... 82.4 2e-14 gi|118467304|ref|YP_882544.1| hypothetical protein MAV_3362 [Myc... 78.6 3e-13 gi|118467840|ref|YP_890160.1| hypothetical protein MSMEG_5934 [M... 77.8 4e-13 gi|342858712|ref|ZP_08715367.1| hypothetical protein MCOL_07541 ... 77.0 9e-13 gi|41407241|ref|NP_960077.1| hypothetical protein MAP1143c [Myco... 75.5 2e-12 gi|254822412|ref|ZP_05227413.1| hypothetical protein MintA_20936... 74.3 6e-12 gi|296170717|ref|ZP_06852291.1| conserved hypothetical protein [... 62.0 2e-08 gi|118469849|ref|YP_884796.1| hypothetical protein MSMEG_0383 [M... 59.3 2e-07 gi|226363216|ref|YP_002780998.1| hypothetical protein ROP_38060 ... 57.8 5e-07 gi|120404799|ref|YP_954628.1| hypothetical protein Mvan_3841 [My... 54.3 6e-06 gi|54022632|ref|YP_116874.1| hypothetical protein nfa6650 [Nocar... 48.1 4e-04 gi|298709098|emb|CBJ31046.1| conserved unknown protein [Ectocarp... 36.2 1.5 gi|291443115|ref|ZP_06582505.1| predicted protein [Streptomyces ... 36.2 1.5 gi|255601454|ref|XP_002537680.1| conserved hypothetical protein ... 36.2 1.6 gi|296395203|ref|YP_003660087.1| hypothetical protein Srot_2825 ... 36.2 1.6 gi|239986173|ref|ZP_04706837.1| putative ABC transporter permeas... 35.8 1.9 gi|317509178|ref|ZP_07966802.1| tat pathway signal sequence [Seg... 35.8 2.1 gi|241758952|ref|ZP_04757064.1| periplasmic transport protein [N... 34.3 6.9 gi|156847974|ref|XP_001646870.1| hypothetical protein Kpol_2002p... 34.3 7.1 gi|342889816|gb|EGU88763.1| hypothetical protein FOXB_00738 [Fus... 33.5 9.5 >gi|15608314|ref|NP_215690.1| low molecular weight T-cell antigen TB8.4 [Mycobacterium tuberculosis H37Rv] gi|15840617|ref|NP_335654.1| hypothetical protein MT1211 [Mycobacterium tuberculosis CDC1551] gi|31792368|ref|NP_854861.1| hypothetical protein Mb1207c [Mycobacterium bovis AF2122/97] 79 more sequence titles Length=110 Score = 213 bits (542), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%) Query 1 MRLSLTALSAGVGAVAMSLTVGAGVASADPVDAVINTTCNYGQVVAALNATDPGAAAQFN 60 MRLSLTALSAGVGAVAMSLTVGAGVASADPVDAVINTTCNYGQVVAALNATDPGAAAQFN Sbjct 1 MRLSLTALSAGVGAVAMSLTVGAGVASADPVDAVINTTCNYGQVVAALNATDPGAAAQFN 60 Query 61 ASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 ASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY Sbjct 61 ASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 >gi|240171690|ref|ZP_04750349.1| putative antigen [Mycobacterium kansasii ATCC 12478] Length=110 Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 87/110 (80%), Positives = 100/110 (91%), Gaps = 0/110 (0%) Query 1 MRLSLTALSAGVGAVAMSLTVGAGVASADPVDAVINTTCNYGQVVAALNATDPGAAAQFN 60 MRLSL L+ GA+A+SLT GAGVASADP+DAVINTTCNYGQV+AALNATDPGAAAQFN Sbjct 1 MRLSLKGLTVAAGALALSLTAGAGVASADPLDAVINTTCNYGQVMAALNATDPGAAAQFN 60 Query 61 ASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 ASP+AQ +L +FLA+PPP+RA MAAQ+QA+PGAAQY+GLVESVA SCNNY Sbjct 61 ASPIAQGWLHSFLASPPPRRAQMAAQVQAMPGAAQYVGLVESVAASCNNY 110 >gi|183984250|ref|YP_001852541.1| putative antigen [Mycobacterium marinum M] gi|183177576|gb|ACC42686.1| low molecular weight T-cell antigen TB8.4 [Mycobacterium marinum M] Length=110 Score = 177 bits (448), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 87/110 (80%), Positives = 98/110 (90%), Gaps = 0/110 (0%) Query 1 MRLSLTALSAGVGAVAMSLTVGAGVASADPVDAVINTTCNYGQVVAALNATDPGAAAQFN 60 MRLSLT L GA A+SL+VGAGVASA P+D VINTTCNYGQV+AALNATDPGAAAQFN Sbjct 1 MRLSLTGLGVAAGAFALSLSVGAGVASASPLDTVINTTCNYGQVMAALNATDPGAAAQFN 60 Query 61 ASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 ASPVAQ +L +FLA+PPP+RA MAAQLQA+PGA+QY+GLVESVA SCNNY Sbjct 61 ASPVAQGWLHSFLASPPPRRAQMAAQLQAMPGASQYVGLVESVASSCNNY 110 >gi|118616769|ref|YP_905101.1| putative antigen [Mycobacterium ulcerans Agy99] gi|118568879|gb|ABL03630.1| low molecular weight T-cell antigen TB8.4 [Mycobacterium ulcerans Agy99] Length=111 Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 87/111 (79%), Positives = 98/111 (89%), Gaps = 1/111 (0%) Query 1 MRLSL-TALSAGVGAVAMSLTVGAGVASADPVDAVINTTCNYGQVVAALNATDPGAAAQF 59 MRLSL T L GA A+SL+VGAGVASA P+D VINTTCNYGQV+AALNATDPGAAAQF Sbjct 1 MRLSLLTGLGVAAGAFALSLSVGAGVASASPLDTVINTTCNYGQVMAALNATDPGAAAQF 60 Query 60 NASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 NASPVAQ +L +FLA+PPP+RA MAAQLQA+PGA+QY+GLVESVA SCNNY Sbjct 61 NASPVAQGWLHSFLASPPPRRAQMAAQLQAMPGASQYVGLVESVASSCNNY 111 >gi|167970145|ref|ZP_02552422.1| low molecular weight T-cell antigen TB8.4 [Mycobacterium tuberculosis H37Ra] Length=80 Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 79/80 (99%), Positives = 80/80 (100%), Gaps = 0/80 (0%) Query 31 VDAVINTTCNYGQVVAALNATDPGAAAQFNASPVAQSYLRNFLAAPPPQRAAMAAQLQAV 90 +DAVINTTCNYGQVVAALNATDPGAAAQFNASPVAQSYLRNFLAAPPPQRAAMAAQLQAV Sbjct 1 MDAVINTTCNYGQVVAALNATDPGAAAQFNASPVAQSYLRNFLAAPPPQRAAMAAQLQAV 60 Query 91 PGAAQYIGLVESVAGSCNNY 110 PGAAQYIGLVESVAGSCNNY Sbjct 61 PGAAQYIGLVESVAGSCNNY 80 >gi|254818771|ref|ZP_05223772.1| hypothetical protein MintA_02544 [Mycobacterium intracellulare ATCC 13950] Length=94 Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 65/94 (70%), Positives = 77/94 (82%), Gaps = 0/94 (0%) Query 17 MSLTVGAGVASADPVDAVINTTCNYGQVVAALNATDPGAAAQFNASPVAQSYLRNFLAAP 76 M+LT AG+ASADP DA+INTTCNYGQV+AALNATDP AA Q N+SPVAQSY+RNFLAAP Sbjct 1 MALTAAAGIASADPTDAIINTTCNYGQVIAALNATDPAAAQQLNSSPVAQSYIRNFLAAP 60 Query 77 PPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 PP+R MA Q+QA+P A +Y + VA +CNNY Sbjct 61 PPKREQMAQQIQAMPAAQKYYNTINQVAVTCNNY 94 >gi|296170062|ref|ZP_06851665.1| low molecular weight T-cell antigen TB8.4 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895272|gb|EFG74982.1| low molecular weight T-cell antigen TB8.4 [Mycobacterium parascrofulaceum ATCC BAA-614] Length=110 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 69/110 (63%), Positives = 89/110 (81%), Gaps = 0/110 (0%) Query 1 MRLSLTALSAGVGAVAMSLTVGAGVASADPVDAVINTTCNYGQVVAALNATDPGAAAQFN 60 MRLSLT L+ G+ A++LT AGVASA+P DA+INTTCNYGQV+AALNATDP AAA+ N Sbjct 1 MRLSLTKLTIAAGSAAVALTAAAGVASANPNDAIINTTCNYGQVIAALNATDPAAAAKLN 60 Query 61 ASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 +SP+AQSY+R+FLA+PPP+R MA Q+QA+P A +Y + VA +CNN+ Sbjct 61 SSPMAQSYIRSFLASPPPKRQEMAQQIQAMPSAMKYYDDINQVAVTCNNF 110 >gi|41408707|ref|NP_961543.1| hypothetical protein MAP2609 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118465162|ref|YP_880559.1| hypothetical protein MAV_1314 [Mycobacterium avium 104] gi|254774192|ref|ZP_05215708.1| hypothetical protein MaviaA2_05895 [Mycobacterium avium subsp. avium ATCC 25291] gi|39578305|gb|AAR28662.1| 9 kDa antigen [Mycobacterium avium subsp. paratuberculosis] gi|41397065|gb|AAS04926.1| hypothetical protein MAP_2609 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118166449|gb|ABK67346.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336458656|gb|EGO37618.1| hypothetical protein MAPs_10890 [Mycobacterium avium subsp. paratuberculosis S397] Length=110 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 68/110 (62%), Positives = 87/110 (80%), Gaps = 0/110 (0%) Query 1 MRLSLTALSAGVGAVAMSLTVGAGVASADPVDAVINTTCNYGQVVAALNATDPGAAAQFN 60 MRLSL+ L VG+ A++LT AGVASADP+DA+INTTCNYGQV+AALNA+DP AA Q N Sbjct 1 MRLSLSKLGVAVGSAAVALTAAAGVASADPMDAIINTTCNYGQVIAALNASDPAAAQQLN 60 Query 61 ASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 +SP+AQSY++ FLA+PP +R MA Q+Q +P A QYI + VA +CNN+ Sbjct 61 SSPMAQSYIQRFLASPPAKRQQMAQQIQGMPAAQQYINDINQVAVTCNNF 110 >gi|342862064|ref|ZP_08718707.1| hypothetical protein MCOL_24356 [Mycobacterium colombiense CECT 3035] gi|342130368|gb|EGT83683.1| hypothetical protein MCOL_24356 [Mycobacterium colombiense CECT 3035] Length=110 Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 74/110 (68%), Positives = 88/110 (80%), Gaps = 0/110 (0%) Query 1 MRLSLTALSAGVGAVAMSLTVGAGVASADPVDAVINTTCNYGQVVAALNATDPGAAAQFN 60 MRLSL+ L VG+ A++LT AGVASADP DA+INTTCNYGQV+AALNATDP AA Q N Sbjct 1 MRLSLSKLGVAVGSAAVALTAAAGVASADPSDAIINTTCNYGQVIAALNATDPAAAQQLN 60 Query 61 ASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 +SPVAQSY+RNFLAAPPP+R MA Q+QA+P A +Y + VA +CNNY Sbjct 61 SSPVAQSYIRNFLAAPPPKRQQMAQQIQAMPSAQKYYDDINQVAVTCNNY 110 >gi|333990201|ref|YP_004522815.1| antigen [Mycobacterium sp. JDM601] gi|333486169|gb|AEF35561.1| putative antigen [Mycobacterium sp. JDM601] Length=112 Score = 117 bits (292), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 65/109 (60%), Positives = 87/109 (80%), Gaps = 1/109 (0%) Query 3 LSLTALSAGVGAVAMSLTVGAGVASADP-VDAVINTTCNYGQVVAALNATDPGAAAQFNA 61 LSLT ++ G++A+SL+ GAG ASADP + +INTTCNY QV AALNA +P AAA+FNA Sbjct 4 LSLTRIAVAAGSLALSLSAGAGFASADPDLGPIINTTCNYSQVNAALNAENPAAAAEFNA 63 Query 62 SPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 SP+AQ++LR+FL++PP +R +A Q+QA+P A QYIG + S+A SCNNY Sbjct 64 SPMAQTWLRSFLSSPPDKRQRIATQIQAMPEAQQYIGTITSIATSCNNY 112 >gi|169629574|ref|YP_001703223.1| hypothetical protein MAB_2488c [Mycobacterium abscessus ATCC 19977] gi|169241541|emb|CAM62569.1| Conserved hypothetical protein (9 kDa antigen) [Mycobacterium abscessus] Length=110 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 55/110 (50%), Positives = 77/110 (70%), Gaps = 2/110 (1%) Query 3 LSLTA-LSAGVGAVAMSLTVGAGVASADP-VDAVINTTCNYGQVVAALNATDPGAAAQFN 60 ++LTA L G GAVA+SL G G+ASADP V A++NTTC Y Q++AALN P AA Q N Sbjct 1 MALTAKLVVGSGAVALSLVAGGGIASADPDVTAIVNTTCTYPQIMAALNEQSPAAAQQVN 60 Query 61 ASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 A+P+A ++L+ F+A+P P+R M +++ +P +Y L+ VA SCNNY Sbjct 61 ANPIAGAWLQQFVASPKPKRQQMVNEVRGMPAVQEYTVLINQVANSCNNY 110 >gi|118473331|ref|YP_889060.1| hypothetical protein MSMEG_4804 [Mycobacterium smegmatis str. MC2 155] gi|118174618|gb|ABK75514.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=115 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 57/109 (53%), Positives = 69/109 (64%), Gaps = 1/109 (0%) Query 3 LSLTALSAGVGAVAMSLTVGAGVASADP-VDAVINTTCNYGQVVAALNATDPGAAAQFNA 61 S T L+ A +L + AG+ASA P AV+NTTC+Y QV+AALNA P AAQFN Sbjct 7 FSRTKLAIAAAGFAAALPLSAGIASAQPDFSAVVNTTCSYEQVMAALNAQQPDLAAQFNT 66 Query 62 SPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 SP+AQ LRNFLAA P +R QLQ P A QY G + S+A SC+ Y Sbjct 67 SPMAQGMLRNFLAAAPAERQQTVNQLQTNPMAQQYFGTISSIASSCSRY 115 >gi|169631775|ref|YP_001705424.1| hypothetical protein MAB_4702c [Mycobacterium abscessus ATCC 19977] gi|169243742|emb|CAM64770.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=112 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 54/111 (49%), Positives = 72/111 (65%), Gaps = 1/111 (0%) Query 1 MRLSLTALSAGVGAVAMSLTVGAGVASADP-VDAVINTTCNYGQVVAALNATDPGAAAQF 59 +RLSL LSA +G + +S TVGAG+ASADP +D INTTC+Y QV+AALNA DP Sbjct 2 LRLSLRGLSAVLGGLVLSSTVGAGIASADPDLDLAINTTCSYPQVIAALNAQDPQFGKAL 61 Query 60 NASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 + SP+ Q LR FLAA P +RA A + P Y+G++E +C+N+ Sbjct 62 SQSPILQRGLREFLAAGPEKRAQTAQDVANAPAFQPYLGVMEQAYRTCHNF 112 >gi|333991736|ref|YP_004524350.1| antigen [Mycobacterium sp. JDM601] gi|333487704|gb|AEF37096.1| putative antigen [Mycobacterium sp. JDM601] Length=111 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 44/76 (58%), Positives = 59/76 (78%), Gaps = 0/76 (0%) Query 35 INTTCNYGQVVAALNATDPGAAAQFNASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAA 94 ++TTC+Y QVVAA+NA P AAQFNA+P+AQ++L++FLA+PPPQR M Q Q VP AA Sbjct 36 VSTTCSYSQVVAAMNAQSPETAAQFNATPMAQTFLQDFLASPPPQREQMLQQAQGVPEAA 95 Query 95 QYIGLVESVAGSCNNY 110 Q++ LV +A +CN Y Sbjct 96 QFVNLVGPIAKTCNKY 111 >gi|169631192|ref|YP_001704841.1| hypothetical protein MAB_4114 [Mycobacterium abscessus ATCC 19977] gi|146760157|emb|CAJ77702.1| Rv1174c protein [Mycobacterium abscessus] gi|169243159|emb|CAM64187.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=112 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 48/110 (44%), Positives = 71/110 (65%), Gaps = 1/110 (0%) Query 2 RLSLTALSAGVGAVAMSLTVGAGVASADPV-DAVINTTCNYGQVVAALNATDPGAAAQFN 60 +LSLT A VG + M+L+ GAG+ASADPV D ++N+TC Y Q AAL+A +P AA F+ Sbjct 3 KLSLTKTIAAVGGITMALSAGAGLASADPVTDEMVNSTCTYEQANAALHAENPMAAEYFD 62 Query 61 ASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 ASP Q ++R FL++P +R +M Q++ G I + + + SC+ Y Sbjct 63 ASPPNQQFMREFLSSPKDKRVSMINQVKGNQGIEYVIPVFQQMVRSCHKY 112 >gi|254819673|ref|ZP_05224674.1| hypothetical protein MintA_07109 [Mycobacterium intracellulare ATCC 13950] Length=95 Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 57/95 (60%), Positives = 69/95 (73%), Gaps = 1/95 (1%) Query 17 MSLTVGAGVASAD-PVDAVINTTCNYGQVVAALNATDPGAAAQFNASPVAQSYLRNFLAA 75 MSLT GAG+ASAD + +NTTCNYGQV++AL A DP AAAQFN+SP + ++LR FLA+ Sbjct 1 MSLTAGAGLASADRDLSPFVNTTCNYGQVISALQAADPQAAAQFNSSPESGAFLRQFLAS 60 Query 76 PPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 PP QR MA L PGA Q LV+ V G+CNNY Sbjct 61 PPGQRQQMAQMLAGQPGADQQFELVQRVFGTCNNY 95 >gi|108800647|ref|YP_640844.1| hypothetical protein Mmcs_3682 [Mycobacterium sp. MCS] gi|119869786|ref|YP_939738.1| hypothetical protein Mkms_3755 [Mycobacterium sp. KMS] gi|126436271|ref|YP_001071962.1| hypothetical protein Mjls_3695 [Mycobacterium sp. JLS] gi|108771066|gb|ABG09788.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119695875|gb|ABL92948.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126236071|gb|ABN99471.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=112 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 52/111 (47%), Positives = 70/111 (64%), Gaps = 1/111 (0%) Query 1 MRLSLTALSAGVGAVAMSLTVGAGVASADP-VDAVINTTCNYGQVVAALNATDPGAAAQF 59 ++LS ++ +G +A+++ + AGVASA P + +INTTC Y QV+AALN P AAQF Sbjct 2 LKLSRKNIAITLGGLAVAIPLSAGVASAQPNLGPIINTTCTYDQVIAALNDQHPDLAAQF 61 Query 60 NASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 Q +RNFLAA P QR A A LQ+ P A Y G + +VA +CNNY Sbjct 62 AQQRSGQQAVRNFLAASPQQRQATVAFLQSNPTAQAYFGPISNVAATCNNY 112 >gi|342859834|ref|ZP_08716487.1| hypothetical protein MCOL_13183 [Mycobacterium colombiense CECT 3035] gi|342132966|gb|EGT86186.1| hypothetical protein MCOL_13183 [Mycobacterium colombiense CECT 3035] Length=104 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/104 (56%), Positives = 72/104 (70%), Gaps = 1/104 (0%) Query 8 LSAGVGAVAMSLTVGAGVASAD-PVDAVINTTCNYGQVVAALNATDPGAAAQFNASPVAQ 66 ++A V + SLT GAG+ASAD + +NTTCNY QV +AL A DP AAAQFN+SP + Sbjct 1 MAAAVCGLTWSLTAGAGLASADRDLSPFVNTTCNYDQVQSALQAADPQAAAQFNSSPESV 60 Query 67 SYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 S+LR FLA+PP QR MA L + PGA Q GLV+ V +CNNY Sbjct 61 SFLRQFLASPPGQRQQMAQMLASQPGADQEFGLVQRVFNTCNNY 104 >gi|146760120|emb|CAJ77682.1| Rv1174c protein [Mycobacterium chelonae] Length=112 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 47/110 (43%), Positives = 69/110 (63%), Gaps = 1/110 (0%) Query 2 RLSLTALSAGVGAVAMSLTVGAGVASADPV-DAVINTTCNYGQVVAALNATDPGAAAQFN 60 + SLT ++A VG ++L+ GAG+ASADPV D ++N+TC Y Q AAL+A +P AA F+ Sbjct 3 KKSLTKIAAVVGGATLALSAGAGLASADPVTDEMVNSTCTYDQANAALHAENPMAAEYFD 62 Query 61 ASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 ASP Q ++R FL AP +R M Q++ G I + + + SC+ Y Sbjct 63 ASPPNQQFMREFLGAPKDKRITMINQVRGNQGIEYVIPVFQQMVRSCHKY 112 >gi|333991752|ref|YP_004524366.1| antigen [Mycobacterium sp. JDM601] gi|333487720|gb|AEF37112.1| putative antigen [Mycobacterium sp. JDM601] Length=104 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 39/76 (52%), Positives = 53/76 (70%), Gaps = 0/76 (0%) Query 35 INTTCNYGQVVAALNATDPGAAAQFNASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAA 94 ++TTC+Y QVV+A+N PG A QFNA+P AQ++L+NFLAAPPPQR + Q Q P A Sbjct 29 VDTTCSYSQVVSAMNDQSPGIAEQFNATPAAQAWLQNFLAAPPPQRQQLVEQAQQRPEAP 88 Query 95 QYIGLVESVAGSCNNY 110 +Y+ L +A C+ Y Sbjct 89 EYVALFSPLANDCDYY 104 >gi|118462721|ref|YP_881574.1| hypothetical protein MAV_2372 [Mycobacterium avium 104] gi|254775043|ref|ZP_05216559.1| hypothetical protein MaviaA2_10276 [Mycobacterium avium subsp. avium ATCC 25291] gi|118164008|gb|ABK64905.1| conserved hypothetical protein [Mycobacterium avium 104] Length=111 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/100 (56%), Positives = 71/100 (71%), Gaps = 2/100 (2%) Query 12 VGAVAMSLTVGAGVASAD-PVDAVINTTCNYGQVVAALNATDPGAAAQFNASPVAQSYLR 70 V +A++LT AG ASAD + +NTTC+YGQV++AL A DP AAAQF+ASP + S+LR Sbjct 13 VCGLALALT-AAGPASADRDLSPFVNTTCDYGQVMSALQAADPQAAAQFSASPESVSFLR 71 Query 71 NFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 FLA+PP QR MA L + PGA Q GLV+ V +CNNY Sbjct 72 QFLASPPGQRQQMAQMLASQPGADQQFGLVQRVFSTCNNY 111 >gi|41407963|ref|NP_960799.1| hypothetical protein MAP1865c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396317|gb|AAS04182.1| hypothetical protein MAP_1865c [Mycobacterium avium subsp. paratuberculosis K-10] Length=121 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/107 (53%), Positives = 73/107 (69%), Gaps = 2/107 (1%) Query 5 LTALSAGVGAVAMSLTVGAGVASAD-PVDAVINTTCNYGQVVAALNATDPGAAAQFNASP 63 +T + V +A++ T AG ASAD + +NTTC+YGQV++AL A DP AAAQF+ASP Sbjct 16 VTRSAVAVCGLALAFT-AAGPASADRDLSPFVNTTCDYGQVMSALQAADPQAAAQFSASP 74 Query 64 VAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 + S+LR FLA+PP QR MA L + PGA Q GLV+ V +CNNY Sbjct 75 ESVSFLRQFLASPPGQRQQMAQMLASQPGADQQFGLVQRVFSTCNNY 121 >gi|336462017|gb|EGO40866.1| hypothetical protein MAPs_25160 [Mycobacterium avium subsp. paratuberculosis S397] Length=111 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/107 (53%), Positives = 73/107 (69%), Gaps = 2/107 (1%) Query 5 LTALSAGVGAVAMSLTVGAGVASAD-PVDAVINTTCNYGQVVAALNATDPGAAAQFNASP 63 +T + V +A++ T AG ASAD + +NTTC+YGQV++AL A DP AAAQF+ASP Sbjct 6 VTRSAVAVCGLALAFT-AAGPASADRDLSPFVNTTCDYGQVMSALQAADPQAAAQFSASP 64 Query 64 VAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 + S+LR FLA+PP QR MA L + PGA Q GLV+ V +CNNY Sbjct 65 ESVSFLRQFLASPPGQRQQMAQMLASQPGADQQFGLVQRVFSTCNNY 111 >gi|118467304|ref|YP_882544.1| hypothetical protein MAV_3362 [Mycobacterium avium 104] gi|254775808|ref|ZP_05217324.1| hypothetical protein MaviaA2_14220 [Mycobacterium avium subsp. avium ATCC 25291] gi|118168591|gb|ABK69488.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336461612|gb|EGO40477.1| hypothetical protein MAPs_28700 [Mycobacterium avium subsp. paratuberculosis S397] Length=112 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 43/111 (39%), Positives = 66/111 (60%), Gaps = 1/111 (0%) Query 1 MRLSLTALSAGVGAVAMSLTVGAGVASADP-VDAVINTTCNYGQVVAALNATDPGAAAQF 59 M+ SL L+ VG +A++ T GAGVASADP +INTTC+Y Q + A++A +P AA Sbjct 2 MKRSLAKLAVTVGGLALASTAGAGVASADPDYGPMINTTCSYDQAMRAVHAENPMAAQYL 61 Query 60 NASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 + SP Q +L+ +LA+ P QR + ++ GA Q + + + + C Y Sbjct 62 DQSPPNQQFLQQYLASSPDQRVNLLHAIEHNQGAQQALPIFQQMMTDCTRY 112 >gi|118467840|ref|YP_890160.1| hypothetical protein MSMEG_5934 [Mycobacterium smegmatis str. MC2 155] gi|118169127|gb|ABK70023.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=110 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 41/93 (45%), Positives = 57/93 (62%), Gaps = 1/93 (1%) Query 19 LTVGAGVASADP-VDAVINTTCNYGQVVAALNATDPGAAAQFNASPVAQSYLRNFLAAPP 77 LT G GVA+A+P +D+ +NTTC Y Q V+ALNA P N+SP Q+ LR F+ AP Sbjct 18 LTAGTGVANAEPNLDSAVNTTCTYPQFVSALNAQSPVYGGVLNSSPDMQTTLRQFIDAPR 77 Query 78 PQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 R MA + P YIGL+++V +C+N+ Sbjct 78 DLRQRMAKAIVEYPPNQPYIGLLQTVFDTCSNF 110 >gi|342858712|ref|ZP_08715367.1| hypothetical protein MCOL_07541 [Mycobacterium colombiense CECT 3035] gi|342134416|gb|EGT87596.1| hypothetical protein MCOL_07541 [Mycobacterium colombiense CECT 3035] Length=112 Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 41/111 (37%), Positives = 66/111 (60%), Gaps = 1/111 (0%) Query 1 MRLSLTALSAGVGAVAMSLTVGAGVASADP-VDAVINTTCNYGQVVAALNATDPGAAAQF 59 M+ SL L+ VG +A++ T GAG+ASADP +I+TTC+Y Q + A++A +P AA Sbjct 2 MKRSLAKLAVTVGGLALASTAGAGIASADPDYGPMIHTTCSYDQAMRAVHAENPMAAQYL 61 Query 60 NASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 + SP Q +L+ +LA+ P QR + ++ GA Q + + + + C Y Sbjct 62 DQSPPNQQFLQQYLASSPDQRVNLLHAIEHNQGAQQALPIFQQMMTDCTRY 112 >gi|41407241|ref|NP_960077.1| hypothetical protein MAP1143c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395592|gb|AAS03460.1| hypothetical protein MAP_1143c [Mycobacterium avium subsp. paratuberculosis K-10] Length=111 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/111 (38%), Positives = 65/111 (59%), Gaps = 1/111 (0%) Query 1 MRLSLTALSAGVGAVAMSLTVGAGVASADP-VDAVINTTCNYGQVVAALNATDPGAAAQF 59 M+ SL L+ VG +A++ T GAGVASADP +INTTC+Y Q + A++A + AA Sbjct 1 MKRSLAKLAVTVGGLALASTAGAGVASADPDYGPMINTTCSYDQAMRAVHAENQMAAQYL 60 Query 60 NASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 + SP Q +L+ +LA+ P QR + ++ GA Q + + + + C Y Sbjct 61 DQSPPNQQFLQQYLASSPDQRVNLLHAIEHNQGAQQALPIFQQMMTDCTRY 111 >gi|254822412|ref|ZP_05227413.1| hypothetical protein MintA_20936 [Mycobacterium intracellulare ATCC 13950] Length=112 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 41/111 (37%), Positives = 64/111 (58%), Gaps = 1/111 (0%) Query 1 MRLSLTALSAGVGAVAMSLTVGAGVASADP-VDAVINTTCNYGQVVAALNATDPGAAAQF 59 M+ S L+ VG +A++ T GAGVASA P +INTTC+Y Q + A++A +P AA Sbjct 2 MKRSWAKLAVTVGGLALASTAGAGVASASPDYGPMINTTCSYDQAMRAVHAENPMAAQYL 61 Query 60 NASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 + SP Q +L+ +LA+ P QR + ++ GA Q + + + + C Y Sbjct 62 DQSPPNQQFLQQYLASSPDQRVNLLHAIEHNQGAQQALPIFQQMMTDCTRY 112 >gi|296170717|ref|ZP_06852291.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894621|gb|EFG74356.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=112 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/111 (37%), Positives = 65/111 (59%), Gaps = 1/111 (0%) Query 1 MRLSLTALSAGVGAVAMSLTVGAGVASADP-VDAVINTTCNYGQVVAALNATDPGAAAQF 59 + SLT L+ GVG +A++ T AGVASA P +I+TTC+Y Q + A++A +P AA Sbjct 2 FKRSLTRLALGVGGLALASTAAAGVASAAPDYGPMIHTTCSYDQAMRAVHAENPMAAQYL 61 Query 60 NASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 + SP Q +L+ +LA+ P QR + ++ GA Q + + + + C Y Sbjct 62 DQSPPNQQFLQQYLASSPDQRVNLLHAIEHNQGAQQALPIFQQMMTDCTRY 112 >gi|118469849|ref|YP_884796.1| hypothetical protein MSMEG_0383 [Mycobacterium smegmatis str. MC2 155] gi|82393552|gb|ABB72063.1| Rv1174c [Mycobacterium smegmatis str. MC2 155] gi|118171136|gb|ABK72032.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=112 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/111 (35%), Positives = 61/111 (55%), Gaps = 1/111 (0%) Query 1 MRLSLTALSAGVGAVAMSLTVGAGVASADP-VDAVINTTCNYGQVVAALNATDPGAAAQF 59 +R SLT VGA A+SL GVASA+P + ++++ CN+ Q + A+ +P AA Sbjct 2 IRKSLTRFGVAVGAAALSLGAATGVASAEPDITPLVDSPCNFDQAMTAVRTENPMAAQYL 61 Query 60 NASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNNY 110 + P ++R FLA+P QR + Q++ PGA + + + + SC Y Sbjct 62 DKYPANIEFIRVFLASPRDQRVNLLNQIKNNPGANVALPVFQQMLTSCVKY 112 >gi|226363216|ref|YP_002780998.1| hypothetical protein ROP_38060 [Rhodococcus opacus B4] gi|226241705|dbj|BAH52053.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=126 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 30/101 (30%), Positives = 58/101 (58%), Gaps = 14/101 (13%) Query 24 GVASADPVDA----VINTTCNYGQVVAALNATDPGAAAQFNASPVAQSYLRNFLAAPPPQ 79 G+ASADP D+ ++N+TC++ Q+ AA++ P AA+ + +P ++ L +F + P + Sbjct 26 GIASADPTDSDSARLVNSTCSFAQIDAAMHDVTPQLAARLDQAPERKAQLADFFSKSPAE 85 Query 80 RAA-------MAAQLQAVPG---AAQYIGLVESVAGSCNNY 110 R A + ++L+ VP A ++ ++A +C+NY Sbjct 86 RQAVLDAHPQLKSRLETVPTEGPAVEWRAKALTIAETCDNY 126 >gi|120404799|ref|YP_954628.1| hypothetical protein Mvan_3841 [Mycobacterium vanbaalenii PYR-1] gi|119957617|gb|ABM14622.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=129 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 34/102 (34%), Positives = 50/102 (50%), Gaps = 15/102 (14%) Query 24 GVASADPVDA-VINTTCNYGQVVAALNATDPGAAAQFNASPVAQSYLRNFLAAPPPQRAA 82 GVASA P + +I+TTC+Y Q+ AA+ P AA + P AQ LR+F A P QR Sbjct 28 GVASAQPGNGPLIHTTCSYDQLYAAIRTEAPRAATALDERPAAQQKLRDFAAMPVEQRQQ 87 Query 83 MAAQL--------------QAVPGAAQYIGLVESVAGSCNNY 110 ++L A P + + + VA +C++Y Sbjct 88 ELSRLLAENPQWQAKIDEKWATPEGQEKVQRMARVAETCHDY 129 >gi|54022632|ref|YP_116874.1| hypothetical protein nfa6650 [Nocardia farcinica IFM 10152] gi|54014140|dbj|BAD55510.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=128 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/103 (35%), Positives = 56/103 (55%), Gaps = 14/103 (13%) Query 22 GAGVASADPVDA---VINTTCNYGQVVAALNATDPGAAAQFNASPVAQSYLRNFLAAPPP 78 G GVA+A P+++ +++T C + QV AAL+A P AA +A P ++ L+ P Sbjct 26 GTGVAAAGPLESAEPLLSTDCTFAQVDAALHAEAPELAAMLDAYPAQKAELQRRFDQPVE 85 Query 79 QRAA-----------MAAQLQAVPGAAQYIGLVESVAGSCNNY 110 QR A +AAQ ++ P AAQ + +VA +C+NY Sbjct 86 QRRADFQMLIEQNPDLAAQAESDPRAAQLSQALAAVAATCHNY 128 >gi|298709098|emb|CBJ31046.1| conserved unknown protein [Ectocarpus siliculosus] Length=1237 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 21/59 (36%), Positives = 30/59 (51%), Gaps = 1/59 (1%) Query 52 DPGAAAQF-NASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSCNN 109 DPG N +P A++ L+ L P A+AA LQA+ GA ++G V + NN Sbjct 345 DPGLPESLQNLTPEAKASLQKILPTLNPSNNAVAASLQALTGANNWLGTVAKFGINSNN 403 >gi|291443115|ref|ZP_06582505.1| predicted protein [Streptomyces roseosporus NRRL 15998] gi|291346062|gb|EFE72966.1| predicted protein [Streptomyces roseosporus NRRL 15998] Length=247 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 33/91 (37%), Positives = 43/91 (48%), Gaps = 16/91 (17%) Query 20 TVGAGVASADPVDAVINT--TCNYGQVVAALNATDPGAAAQFNASPVAQSYL----RNFL 73 TVG A DAV+N N+GQ+ AA F A+ V+ +L R L Sbjct 43 TVGQEQAERAGADAVLNAFFALNFGQI----------AAVAFGATAVSSEFLNGALRVSL 92 Query 74 AAPPPQRAAMAAQLQAVPGAAQYIGLVESVA 104 AA P + AA++ A+ GA IGLV S A Sbjct 93 AAVPRRSLFYAAKMTAIGGAVLVIGLVTSFA 123 >gi|255601454|ref|XP_002537680.1| conserved hypothetical protein [Ricinus communis] gi|223515484|gb|EEF24703.1| conserved hypothetical protein [Ricinus communis] Length=412 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 31/89 (35%), Positives = 43/89 (49%), Gaps = 5/89 (5%) Query 15 VAMSLTVG-AGVASADPVDAVINTTCNYGQVVAALNATDPGAAAQFNASPVAQSYLRNFL 73 VA VG AGV DP DA + + Q+ AA A P A + A LR+ Sbjct 292 VAEGRHVGLAGVG--DPADAGV--LHRHLQLYAAEGAHQPRADRRPAAGRAGPGLLRHER 347 Query 74 AAPPPQRAAMAAQLQAVPGAAQYIGLVES 102 A P++ A +L+AVPG +++G VE Sbjct 348 TAGGPRQRHHAGRLRAVPGRRRHVGRVEH 376 >gi|296395203|ref|YP_003660087.1| hypothetical protein Srot_2825 [Segniliparus rotundus DSM 44985] gi|296182350|gb|ADG99256.1| hypothetical protein Srot_2825 [Segniliparus rotundus DSM 44985] Length=133 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/67 (33%), Positives = 31/67 (47%), Gaps = 8/67 (11%) Query 24 GVASADPVDA----VINTTCNYGQVVAALNATDPGAAAQFNASP----VAQSYLRNFLAA 75 G ASADP + ++NTTC+ Q+ AA P +A P A ++ FL Sbjct 27 GSASADPQEQDSSPLVNTTCSVEQIDAATQKEAPEFWEHISADPEKLQKAHERMQEFLDK 86 Query 76 PPPQRAA 82 P +R A Sbjct 87 SPEERQA 93 >gi|239986173|ref|ZP_04706837.1| putative ABC transporter permease protein [Streptomyces roseosporus NRRL 11379] Length=245 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 33/91 (37%), Positives = 43/91 (48%), Gaps = 16/91 (17%) Query 20 TVGAGVASADPVDAVINT--TCNYGQVVAALNATDPGAAAQFNASPVAQSYL----RNFL 73 TVG A DAV+N N+GQ+ AA F A+ V+ +L R L Sbjct 41 TVGQEQAERAGADAVLNAFFALNFGQI----------AAVAFGATAVSSEFLNGALRVSL 90 Query 74 AAPPPQRAAMAAQLQAVPGAAQYIGLVESVA 104 AA P + AA++ A+ GA IGLV S A Sbjct 91 AAVPRRSLFYAAKMTAIGGAVLVIGLVTSFA 121 >gi|317509178|ref|ZP_07966802.1| tat pathway signal sequence [Segniliparus rugosus ATCC BAA-974] gi|316252535|gb|EFV11981.1| tat pathway signal sequence [Segniliparus rugosus ATCC BAA-974] Length=137 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 21/65 (33%), Positives = 31/65 (48%), Gaps = 8/65 (12%) Query 24 GVASADPVD----AVINTTCNYGQVVAALNATDPGAAAQFNASP----VAQSYLRNFLAA 75 G ASADP + A++NTTC Q+ +A P + ++ P A L+ FL Sbjct 27 GSASADPQEHDGSAIVNTTCTVEQIDSATQKEAPKFWERISSDPEKLQKANDRLQEFLDK 86 Query 76 PPPQR 80 P +R Sbjct 87 SPEER 91 >gi|241758952|ref|ZP_04757064.1| periplasmic transport protein [Neisseria flavescens SK114] gi|241320773|gb|EER57006.1| periplasmic transport protein [Neisseria flavescens SK114] Length=196 Score = 34.3 bits (77), Expect = 6.9, Method: Compositional matrix adjust. Identities = 35/108 (33%), Positives = 50/108 (47%), Gaps = 16/108 (14%) Query 5 LTALSAGVGAVAMSLTVGAGVASADPVDAVINTTCNYGQVVAALNATDPGAAAQFNASPV 64 ++ALS GV +++M+ A P DAV N QV+ LN+ D A Q A Sbjct 7 ISALSIGVLSISMAF--------ASPADAVNQVRENSVQVLKILNSGDANTARQ-KAETY 57 Query 65 AQSYLRNF-----LAAPPPQRAAMAAQLQAVPGAAQYIGLVESVAGSC 107 A Y +F LA P R A AQ QA+ Q + L+ + +G+ Sbjct 58 AIPYF-DFQRMTALAVGNPWRTATDAQKQALTKEFQTL-LIRTYSGTM 103 >gi|156847974|ref|XP_001646870.1| hypothetical protein Kpol_2002p83 [Vanderwaltozyma polyspora DSM 70294] gi|156117551|gb|EDO19012.1| hypothetical protein Kpol_2002p83 [Vanderwaltozyma polyspora DSM 70294] Length=616 Score = 34.3 bits (77), Expect = 7.1, Method: Composition-based stats. Identities = 16/65 (25%), Positives = 30/65 (47%), Gaps = 1/65 (1%) Query 34 VINTTCNYGQVVAAL-NATDPGAAAQFNASPVAQSYLRNFLAAPPPQRAAMAAQLQAVPG 92 +++ CN+G+ + L N TDPG + ++ + +F APP M +P Sbjct 137 ILSILCNFGKSIQRLENITDPGCNDIISTGAISSEKVTSFDLAPPNSLPEMTVPNDYIPN 196 Query 93 AAQYI 97 + Y+ Sbjct 197 SQMYL 201 >gi|342889816|gb|EGU88763.1| hypothetical protein FOXB_00738 [Fusarium oxysporum Fo5176] Length=607 Score = 33.5 bits (75), Expect = 9.5, Method: Compositional matrix adjust. Identities = 21/85 (25%), Positives = 36/85 (43%), Gaps = 3/85 (3%) Query 16 AMSLTVGAGVASADPVDAVINTTCNYGQVVAALNATDPGAAAQFNA---SPVAQSYLRNF 72 A++ TVG G+ + PV + N+ + N T+ ++F+A + SY N Sbjct 41 ALNHTVGGGLIRSTPVASSCYKDSNFASAFSCKNVTESWFLSEFHALQPESIGYSYWANN 100 Query 73 LAAPPPQRAAMAAQLQAVPGAAQYI 97 PP + Q + G QY+ Sbjct 101 SCVPPNDHGYRSGQSCKIGGLPQYV 125 Lambda K H 0.315 0.125 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 129022162688 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40