BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1184c
Length=359
Score E
Sequences producing significant alignments: (Bits) Value
gi|15840627|ref|NP_335664.1| hypothetical protein MT1221 [Mycoba... 721 0.0
gi|15608324|ref|NP_215700.1| hypothetical protein Rv1184c [Mycob... 719 0.0
gi|253799773|ref|YP_003032774.1| hypothetical protein TBMG_02798... 717 0.0
gi|308370035|ref|ZP_07420076.2| hypothetical exported protein [M... 634 5e-180
gi|308231766|ref|ZP_07413691.2| hypothetical exported protein [M... 603 1e-170
gi|466805|gb|AAA17081.1| Lepb1170_F3_112 [Mycobacterium leprae] 407 1e-111
gi|15827630|ref|NP_301893.1| hypothetical protein ML1232 [Mycoba... 405 5e-111
gi|342857529|ref|ZP_08714185.1| hypothetical protein MCOL_01595 ... 399 5e-109
gi|296170518|ref|ZP_06852104.1| conserved hypothetical protein [... 320 2e-85
gi|254819857|ref|ZP_05224858.1| hypothetical protein MintA_08029... 308 6e-82
gi|118462506|ref|YP_880985.1| hypothetical protein MAV_1760 [Myc... 300 3e-79
gi|41408332|ref|NP_961168.1| hypothetical protein MAP2234 [Mycob... 300 3e-79
gi|146760143|emb|CAJ77664.1| PE protein [Mycobacterium chelonae] 298 6e-79
gi|336458231|gb|EGO37212.1| PE-PPE domain-containing protein [My... 298 8e-79
gi|120401302|ref|YP_951131.1| hypothetical protein Mvan_0276 [My... 298 1e-78
gi|254774576|ref|ZP_05216092.1| hypothetical protein MaviaA2_078... 292 7e-77
gi|118471696|ref|YP_884825.1| hypothetical protein MSMEG_0412 [M... 288 9e-76
gi|108797228|ref|YP_637425.1| PE-PPE-like protein [Mycobacterium... 276 4e-72
gi|126432851|ref|YP_001068542.1| hypothetical protein Mjls_0238 ... 276 5e-72
gi|145221005|ref|YP_001131683.1| hypothetical protein Mflv_0401 ... 274 1e-71
gi|169628033|ref|YP_001701682.1| hypothetical protein MAB_0936c ... 264 2e-68
gi|31794996|ref|NP_857489.1| hypothetical protein Mb3852 [Mycoba... 186 7e-45
gi|167969937|ref|ZP_02552214.1| hypothetical protein MtubH3_1866... 185 1e-44
gi|289445423|ref|ZP_06435167.1| conserved hypothetical protein [... 184 1e-44
gi|289572075|ref|ZP_06452302.1| conserved hypothetical protein [... 184 1e-44
gi|340628791|ref|YP_004747243.1| hypothetical protein MCAN_38411... 184 3e-44
gi|308372753|ref|ZP_07429728.2| hypothetical protein TMEG_00320 ... 183 4e-44
gi|15610958|ref|NP_218339.1| hypothetical protein Rv3822 [Mycoba... 183 4e-44
gi|308232581|ref|ZP_07416523.2| hypothetical protein TMAG_00570 ... 182 5e-44
gi|15843446|ref|NP_338483.1| hypothetical protein MT3930 [Mycoba... 182 6e-44
gi|298527297|ref|ZP_07014706.1| conserved hypothetical protein [... 179 9e-43
gi|323717489|gb|EGB26692.1| hypothetical protein TMMG_00316 [Myc... 176 4e-42
gi|342860079|ref|ZP_08716731.1| hypothetical protein MCOL_14410 ... 173 4e-41
gi|121639740|ref|YP_979964.1| hypothetical protein BCG_3885 [Myc... 169 5e-40
gi|341603761|emb|CCC66442.1| conserved hypothetical protein [Myc... 169 6e-40
gi|296166954|ref|ZP_06849370.1| conserved hypothetical protein [... 167 3e-39
gi|289441259|ref|ZP_06431003.1| conserved hypothetical protein [... 164 2e-38
gi|339296630|gb|AEJ48741.1| hypothetical protein CCDC5079_3552 [... 150 3e-34
gi|108798703|ref|YP_638900.1| PE-PPE-like protein [Mycobacterium... 144 3e-32
gi|120401776|ref|YP_951605.1| hypothetical protein Mvan_0761 [My... 125 1e-26
gi|118473854|ref|YP_889988.1| PE family protein [Mycobacterium s... 119 8e-25
gi|240171670|ref|ZP_04750329.1| PE-PGRS family protein [Mycobact... 118 2e-24
gi|118470771|ref|YP_890365.1| PE family protein [Mycobacterium s... 116 7e-24
gi|315445463|ref|YP_004078342.1| PE-PPE domain-containing protei... 110 3e-22
gi|118468902|ref|YP_889594.1| PPE family protein [Mycobacterium ... 110 4e-22
gi|183984907|ref|YP_001853198.1| PE-PGRS family protein [Mycobac... 109 6e-22
gi|145225096|ref|YP_001135774.1| hypothetical protein Mflv_4518 ... 109 8e-22
gi|289572191|ref|ZP_06452418.1| PPE family protein [Mycobacteriu... 107 4e-21
gi|120402836|ref|YP_952665.1| hypothetical protein Mvan_1838 [My... 106 5e-21
gi|307086331|ref|ZP_07495444.1| PPE family protein [Mycobacteriu... 97.4 3e-18
>gi|15840627|ref|NP_335664.1| hypothetical protein MT1221 [Mycobacterium tuberculosis CDC1551]
gi|254231451|ref|ZP_04924778.1| hypothetical exported protein [Mycobacterium tuberculosis C]
gi|298524681|ref|ZP_07012090.1| hypothetical protein TBAG_00098 [Mycobacterium tuberculosis 94_M4241A]
6 more sequence titles
Length=371
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/359 (100%), Positives = 359/359 (100%), Gaps = 0/359 (0%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR
Sbjct 13 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 72
Query 61 MPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDG 120
MPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDG
Sbjct 73 MPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDG 132
Query 121 TNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAF 180
TNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAF
Sbjct 133 TNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAF 192
Query 181 GASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANA 240
GASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANA
Sbjct 193 GASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANA 252
Query 241 AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYLGMSDAE 300
AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYLGMSDAE
Sbjct 253 AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYLGMSDAE 312
Query 301 VDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDPLTAPGSIVEGARGLLGSPAFGG 359
VDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDPLTAPGSIVEGARGLLGSPAFGG
Sbjct 313 VDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDPLTAPGSIVEGARGLLGSPAFGG 371
>gi|15608324|ref|NP_215700.1| hypothetical protein Rv1184c [Mycobacterium tuberculosis H37Rv]
gi|31792377|ref|NP_854870.1| hypothetical protein Mb1216c [Mycobacterium bovis AF2122/97]
gi|121637115|ref|YP_977338.1| hypothetical protein BCG_1246c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
38 more sequence titles
Length=359
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/359 (100%), Positives = 359/359 (100%), Gaps = 0/359 (0%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR
Sbjct 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
Query 61 MPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDG 120
MPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDG
Sbjct 61 MPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDG 120
Query 121 TNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAF 180
TNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAF
Sbjct 121 TNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAF 180
Query 181 GASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANA 240
GASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANA
Sbjct 181 GASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANA 240
Query 241 AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYLGMSDAE 300
AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYLGMSDAE
Sbjct 241 AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYLGMSDAE 300
Query 301 VDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDPLTAPGSIVEGARGLLGSPAFGG 359
VDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDPLTAPGSIVEGARGLLGSPAFGG
Sbjct 301 VDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDPLTAPGSIVEGARGLLGSPAFGG 359
>gi|253799773|ref|YP_003032774.1| hypothetical protein TBMG_02798 [Mycobacterium tuberculosis KZN
1435]
gi|289555028|ref|ZP_06444238.1| hypothetical exported protein [Mycobacterium tuberculosis KZN
605]
gi|297633731|ref|ZP_06951511.1| hypothetical protein MtubK4_06399 [Mycobacterium tuberculosis
KZN 4207]
6 more sequence titles
Length=359
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/359 (99%), Positives = 359/359 (100%), Gaps = 0/359 (0%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR
Sbjct 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
Query 61 MPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDG 120
MPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDG
Sbjct 61 MPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDG 120
Query 121 TNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAF 180
TNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAF
Sbjct 121 TNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAF 180
Query 181 GASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANA 240
GASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANA
Sbjct 181 GASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANA 240
Query 241 AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYLGMSDAE 300
AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYLG+SDAE
Sbjct 241 AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYLGISDAE 300
Query 301 VDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDPLTAPGSIVEGARGLLGSPAFGG 359
VDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDPLTAPGSIVEGARGLLGSPAFGG
Sbjct 301 VDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDPLTAPGSIVEGARGLLGSPAFGG 359
>gi|308370035|ref|ZP_07420076.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu002]
gi|308371896|ref|ZP_07426590.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu004]
gi|308374244|ref|ZP_07435301.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu006]
15 more sequence titles
Length=316
Score = 634 bits (1636), Expect = 5e-180, Method: Compositional matrix adjust.
Identities = 315/316 (99%), Positives = 316/316 (100%), Gaps = 0/316 (0%)
Query 44 VGDASTAKVVYALGGARMPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLP 103
+GDASTAKVVYALGGARMPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLP
Sbjct 1 MGDASTAKVVYALGGARMPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLP 60
Query 104 PGSHQDNMTVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAP 163
PGSHQDNMTVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAP
Sbjct 61 PGSHQDNMTVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAP 120
Query 164 DKLQFTTFGDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDG 223
DKLQFTTFGDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDG
Sbjct 121 DKLQFTTFGDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDG 180
Query 224 FSDFPDRPDNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVN 283
FSDFPDRPDNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVN
Sbjct 181 FSDFPDRPDNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVN 240
Query 284 HLPLTLPLRYLGMSDAEVDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDPLTAPGS 343
HLPLTLPLRYLGMSDAEVDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDPLTAPGS
Sbjct 241 HLPLTLPLRYLGMSDAEVDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDPLTAPGS 300
Query 344 IVEGARGLLGSPAFGG 359
IVEGARGLLGSPAFGG
Sbjct 301 IVEGARGLLGSPAFGG 316
>gi|308231766|ref|ZP_07413691.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu001]
gi|308370648|ref|ZP_07422224.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu003]
gi|308373064|ref|ZP_07430895.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu005]
gi|308216155|gb|EFO75554.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu001]
gi|308331340|gb|EFP20191.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu003]
gi|308338964|gb|EFP27815.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu005]
Length=299
Score = 603 bits (1555), Expect = 1e-170, Method: Compositional matrix adjust.
Identities = 299/299 (100%), Positives = 299/299 (100%), Gaps = 0/299 (0%)
Query 61 MPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDG 120
MPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDG
Sbjct 1 MPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDG 60
Query 121 TNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAF 180
TNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAF
Sbjct 61 TNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAF 120
Query 181 GASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANA 240
GASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANA
Sbjct 121 GASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANA 180
Query 241 AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYLGMSDAE 300
AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYLGMSDAE
Sbjct 181 AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYLGMSDAE 240
Query 301 VDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDPLTAPGSIVEGARGLLGSPAFGG 359
VDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDPLTAPGSIVEGARGLLGSPAFGG
Sbjct 241 VDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDPLTAPGSIVEGARGLLGSPAFGG 299
>gi|466805|gb|AAA17081.1| Lepb1170_F3_112 [Mycobacterium leprae]
Length=391
Score = 407 bits (1046), Expect = 1e-111, Method: Compositional matrix adjust.
Identities = 212/338 (63%), Positives = 250/338 (74%), Gaps = 7/338 (2%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
MKR++A A VG GFG+ +A+SEP PW P PSP PV + S AK+VYALGGAR
Sbjct 34 MKRLLATTLAALTVGTVSGFGSTVASSEPGEPWLP---PSPVPVRENSPAKIVYALGGAR 90
Query 61 MPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDG 120
P W YT +AG ++FP+ LIDYPA A F + PT L+P +D +T+G A+
Sbjct 91 PPTFDWDYYTIRAGDEFFPDVNRKLIDYPARAPFRYVPTFLVP--GPRDEVTIGEAIAVA 148
Query 121 TNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAF 180
T +L+ AIH GT+PAA VGLSQGSL LD EQ +LA DPTAP PD+L F TFGDP+G H F
Sbjct 149 TKNLNQAIHRGTEPAAVVGLSQGSLALDTEQEQLATDPTAPPPDQLTFNTFGDPSGYHGF 208
Query 181 GASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANA 240
G S LA IF PG +IP+ I+YTMPQ++DSQYD+N VV AYDG S+FPDR DNLLA N
Sbjct 209 GKSVLASIFRPGDYIPL--IDYTMPQRMDSQYDSNRVVAAYDGLSEFPDRADNLLAQLNC 266
Query 241 AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYLGMSDAE 300
G AI+HTP GF P DVPPQNIRTTVNSRGA TTTYL+PVNHLPLTLPLRYLG SDA
Sbjct 267 FAGGAISHTPSGFFNPEDVPPQNIRTTVNSRGAKTTTYLIPVNHLPLTLPLRYLGWSDAL 326
Query 301 VDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDPL 338
VDQID+VLQP+IDAAYA NDN +P+SVDPV G+DP+
Sbjct 327 VDQIDAVLQPKIDAAYAYNDNPLNKPISVDPVNGMDPI 364
>gi|15827630|ref|NP_301893.1| hypothetical protein ML1232 [Mycobacterium leprae TN]
gi|221230107|ref|YP_002503523.1| hypothetical protein MLBr_01232 [Mycobacterium leprae Br4923]
gi|13093181|emb|CAC31613.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933214|emb|CAR71327.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=358
Score = 405 bits (1041), Expect = 5e-111, Method: Compositional matrix adjust.
Identities = 212/338 (63%), Positives = 250/338 (74%), Gaps = 7/338 (2%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
MKR++A A VG GFG+ +A+SEP PW P PSP PV + S AK+VYALGGAR
Sbjct 1 MKRLLATTLAALTVGTVSGFGSTVASSEPGEPWLP---PSPVPVRENSPAKIVYALGGAR 57
Query 61 MPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDG 120
P W YT +AG ++FP+ LIDYPA A F + PT L+P +D +T+G A+
Sbjct 58 PPTFDWDYYTIRAGDEFFPDVNRKLIDYPARAPFRYVPTFLVP--GPRDEVTIGEAIAVA 115
Query 121 TNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAF 180
T +L+ AIH GT+PAA VGLSQGSL LD EQ +LA DPTAP PD+L F TFGDP+G H F
Sbjct 116 TKNLNQAIHRGTEPAAVVGLSQGSLALDTEQEQLATDPTAPPPDQLTFNTFGDPSGYHGF 175
Query 181 GASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANA 240
G S LA IF PG +IP+ I+YTMPQ++DSQYD+N VV AYDG S+FPDR DNLLA N
Sbjct 176 GKSVLASIFRPGDYIPL--IDYTMPQRMDSQYDSNRVVAAYDGLSEFPDRADNLLAQLNC 233
Query 241 AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYLGMSDAE 300
G AI+HTP GF P DVPPQNIRTTVNSRGA TTTYL+PVNHLPLTLPLRYLG SDA
Sbjct 234 FAGGAISHTPSGFFNPEDVPPQNIRTTVNSRGAKTTTYLIPVNHLPLTLPLRYLGWSDAL 293
Query 301 VDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDPL 338
VDQID+VLQP+IDAAYA NDN +P+SVDPV G+DP+
Sbjct 294 VDQIDAVLQPKIDAAYAYNDNPLNKPISVDPVNGMDPI 331
>gi|342857529|ref|ZP_08714185.1| hypothetical protein MCOL_01595 [Mycobacterium colombiense CECT
3035]
gi|342134862|gb|EGT88028.1| hypothetical protein MCOL_01595 [Mycobacterium colombiense CECT
3035]
Length=317
Score = 399 bits (1024), Expect = 5e-109, Method: Compositional matrix adjust.
Identities = 199/295 (68%), Positives = 229/295 (78%), Gaps = 4/295 (1%)
Query 44 VGDASTAKVVYALGGARMPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLP 103
+G +TA+VVYA+GGAR PGIPWYEYT++AGS YFPNAK ++++YPAGA + W P L P
Sbjct 1 MGADATARVVYAVGGARPPGIPWYEYTSRAGSGYFPNAKREIVEYPAGALYGWVPQELFP 60
Query 104 PGSHQDNMTVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAP 163
+D M+VG A+ +SLD + + T+P A V LSQG+L LDQEQARLANDP AP P
Sbjct 61 --GPRDKMSVGQAIDQAADSLDQTVRNATEPGAVVALSQGNLALDQEQARLANDPKAPPP 118
Query 164 DKLQFTTFGDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDG 223
DKLQFTT GDP G HAFGASF + IF P IP FI YTMPQ V+SQYDTN +V AYDG
Sbjct 119 DKLQFTTLGDPVGTHAFGASFASGIFKPADTIP--FIGYTMPQPVESQYDTNRIVAAYDG 176
Query 224 FSDFPDRPDNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVN 283
F+DFPDRPDNLLA NA + + HTP FTGPG VPPQNIRTTVNSRGA TTTYLVPVN
Sbjct 177 FADFPDRPDNLLADLNAVVATTVVHTPAAFTGPGIVPPQNIRTTVNSRGAKTTTYLVPVN 236
Query 284 HLPLTLPLRYLGMSDAEVDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDPL 338
HLPLTL LRYLG SD V+QID+ LQPQIDA Y+RNDN TRPVSVDPV G+DP+
Sbjct 237 HLPLTLGLRYLGWSDNLVNQIDAALQPQIDAGYSRNDNLLTRPVSVDPVNGMDPV 291
>gi|296170518|ref|ZP_06852104.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894830|gb|EFG74553.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=400
Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/354 (50%), Positives = 229/354 (65%), Gaps = 26/354 (7%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
M++++AG A+ +G G FG IA ++ SP G + YALGGA
Sbjct 35 MQKLLAGVTALVTLGATGCFGLGIATADD------------SPDGATPDEGMAYALGGAH 82
Query 61 MPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLP---------PGSHQDNM 111
+PGIP+ EY + G+ +FP K ++++YPAG L P PG D
Sbjct 83 VPGIPYDEYGRRLGAGWFPGLKREIVNYPAGQVQGHVLERLFPGIGRLDEAFPGLGVDGP 142
Query 112 TVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTF 171
++G +V G ++LD AI G P AA+GLS+GSLV+D EQARLANDPTAP P++L F+TF
Sbjct 143 SIGESVAVGEDNLDAAIRRG-GPGAAIGLSEGSLVVDAEQARLANDPTAPPPNQLVFSTF 201
Query 172 GDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRP 231
G+P GRHAFG SFL FP G+ +P ++Y +P V+SQYDT V AYD +DFPDRP
Sbjct 202 GNPVGRHAFGQSFLTSFFPVGAVVPA--MDYRIPPPVESQYDTKAFVAAYDMIADFPDRP 259
Query 232 DNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPL 291
DNLLA+AN +G A HT + FT P VPPQNIRTTVNSRGATTTTYL+P HLPL +PL
Sbjct 260 DNLLALANTLVGEATGHTAVAFTDPSMVPPQNIRTTVNSRGATTTTYLIPEKHLPLVIPL 319
Query 292 RYLGMSDAEVDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDP--LTAPGS 343
YLG+ + E++Q+D+ L P ++A Y+RND+ T P+ VDPVRG DP + AP S
Sbjct 320 GYLGVPEDELNQLDAELAPMVNAGYSRNDDPQTAPIQVDPVRGFDPAAVIAPAS 373
>gi|254819857|ref|ZP_05224858.1| hypothetical protein MintA_08029 [Mycobacterium intracellulare
ATCC 13950]
Length=375
Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 169/354 (48%), Positives = 223/354 (63%), Gaps = 21/354 (5%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
MK+++AG A+ VG G FG A ++ + P A + +ALGGA
Sbjct 1 MKKLLAGVTALVTVGATGCFGVNTATADESPIGG-------PPTPGAPGDQTAFALGGAH 53
Query 61 MPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLP---------PGSHQDNM 111
+ GIP+ EY Q G+Q+FP K +++ YPAG L P PG D
Sbjct 54 VLGIPYDEYIRQEGAQWFPGQKREIVRYPAGQVQGHVLERLFPGIGKLDEQFPGLGADGP 113
Query 112 TVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTF 171
+VG +V G ++LD AI G P A+GLS+G+ V+D QARLANDPTAP PDKL F TF
Sbjct 114 SVGESVDVGIDNLDAAIRTGR-PGTAIGLSEGAFVVDGVQARLANDPTAPPPDKLNFATF 172
Query 172 GDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRP 231
GDP GRHAFG SFL +FP GS +P ++YTMP +SQYDTN V AYD +DFPDRP
Sbjct 173 GDPIGRHAFGQSFLTAMFPVGSVVPA--LDYTMPPPYESQYDTNRFVAAYDSIADFPDRP 230
Query 232 DNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPL 291
DN+ A+AN +G A HT + FT P VPPQNIRTT+NSRGA TT +VP HLPL +PL
Sbjct 231 DNMFALANTLLGLATGHTAVAFTNPSMVPPQNIRTTINSRGAKDTTIMVPEKHLPLVMPL 290
Query 292 RYLGMSDAEVDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDP--LTAPGS 343
+Y+G+ + ++++D++L P+++A Y+RND+ T PV VDPV G DP +TAP +
Sbjct 291 KYVGIDEDTLNKLDAILIPRVNAGYSRNDDPSTAPVQVDPVHGFDPAEVTAPAN 344
>gi|118462506|ref|YP_880985.1| hypothetical protein MAV_1760 [Mycobacterium avium 104]
gi|118163793|gb|ABK64690.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=376
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/354 (47%), Positives = 219/354 (62%), Gaps = 20/354 (5%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
MK+++AG A+ V AG FG AA++ P A + YALGGA
Sbjct 1 MKQLLAGVTALLSVSTAGYFGIGTAAADGGPIGG-------PPTPGAPGDQTAYALGGAH 53
Query 61 MPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLP---------PGSHQDNM 111
+ GIP+ +Y G+ +FP + ++ YPAG L P PG D
Sbjct 54 VLGIPYDQYIRMEGADWFPGQQRQIVRYPAGQVQGHVLERLFPGIGKLDESFPGLGMDGP 113
Query 112 TVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTF 171
+VG +V +G ++LD AI P A+GLS+G+ V+D EQARLANDPTAP P+ L F TF
Sbjct 114 SVGESVAEGIDNLDAAIRTTGRPGTAIGLSEGAFVVDGEQARLANDPTAPPPNTLNFATF 173
Query 172 GDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRP 231
GDP GRHAFG SFL +F GS +P ++YTMP +SQYDTN V AYD +DFPDRP
Sbjct 174 GDPIGRHAFGQSFLTAMFGVGSVVPA--LDYTMPPPYESQYDTNRFVAAYDSIADFPDRP 231
Query 232 DNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPL 291
DN+ A+AN +G A HT + FT P VPPQNIRTT+NSRGA TT ++P HLPL +PL
Sbjct 232 DNMFALANTLMGLATGHTAVAFTNPSMVPPQNIRTTINSRGAKDTTIMIPEKHLPLVMPL 291
Query 292 RYLGMSDAEVDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDP--LTAPGS 343
+Y+G+ + ++++D++L P+++A Y+RND+ T PV VDPV G DP +TAP +
Sbjct 292 KYIGIDENTLNKLDAILTPRVNAGYSRNDDPATAPVQVDPVHGFDPAEVTAPAN 345
>gi|41408332|ref|NP_961168.1| hypothetical protein MAP2234 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396688|gb|AAS04551.1| hypothetical protein MAP_2234 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=376
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/354 (47%), Positives = 219/354 (62%), Gaps = 20/354 (5%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
MK+++AG A+ V AG FG AA++ P A + YALGGA
Sbjct 1 MKQLLAGVTALLSVSTAGYFGIGTAAADGGPIGG-------PPTPGAPGDQTAYALGGAH 53
Query 61 MPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLP---------PGSHQDNM 111
+ GIP+ +Y G+ +FP + ++ YPAG L P PG +
Sbjct 54 VLGIPYDQYIRMEGADWFPGQQRQIVRYPAGQVQGHVLERLFPGIGKLDESFPGLGMNGP 113
Query 112 TVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTF 171
+VG +V +G ++LD AI P A+GLS+G+ V+D EQARLANDPTAP P+ L F TF
Sbjct 114 SVGESVAEGIDNLDAAIRTTGRPGTAIGLSEGAFVVDGEQARLANDPTAPPPNTLNFATF 173
Query 172 GDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRP 231
GDP GRHAFG SFL +F GS +P ++YTMP +SQYDTN V AYD +DFPDRP
Sbjct 174 GDPIGRHAFGQSFLTAMFGVGSVVPA--LDYTMPPPYESQYDTNRFVAAYDSIADFPDRP 231
Query 232 DNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPL 291
DN+ A+AN +G A HT + FT P VPPQNIRTT+NSRGA TT ++P HLPL +PL
Sbjct 232 DNMFALANTLMGLATGHTAVAFTNPSMVPPQNIRTTINSRGAKDTTIMIPEKHLPLVMPL 291
Query 292 RYLGMSDAEVDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDP--LTAPGS 343
RY+G+ + ++++D++L P+++A Y+RND+ T PV VDPV G DP +TAP +
Sbjct 292 RYIGIDENTLNKLDAILTPRVNAGYSRNDDPATAPVQVDPVHGFDPAEVTAPAN 345
>gi|146760143|emb|CAJ77664.1| PE protein [Mycobacterium chelonae]
Length=388
Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 172/364 (48%), Positives = 225/364 (62%), Gaps = 29/364 (7%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPP---------PSPSPVGDASTAK 51
MK ++AGA + + G FG A ++ P PGPP P+PV S +
Sbjct 1 MKDLLAGAALLVVASMTGCFGIPSAVADD--PQVPGPPIPRIAADGTAMPAPV---SPDR 55
Query 52 VVYALGGARMPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLP-------- 103
YALGGA + GIP+ EY G +FP K + I YPAG L P
Sbjct 56 TAYALGGAHVLGIPYDEYIRMTGKDWFPGMKRENIWYPAGQVQGHTLERLFPGIGPVGEK 115
Query 104 --PGSHQDNMTVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAP 161
PG D ++G ++ G +L+NAI G P A+GLS+G+LVL+ ++ LA+DPTAP
Sbjct 116 IMPGLGLDGPSIGESIDVGEPNLENAIRTG-GPGTAMGLSEGALVLNAVKSALASDPTAP 174
Query 162 APDKLQFTTFGDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAY 221
APD L F TFGDP RH FG SFL + F PGS +P F++YT+P V+SQY T+ ++AY
Sbjct 175 APDSLTFATFGDPVARHPFGESFLTQNFAPGSVVP--FMDYTVPAPVESQYHTDQFISAY 232
Query 222 DGFSDFPDRPDNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVP 281
D +D+PDRPDNL AVANA G A HT I FT P VPPQNIRT VNSRG TTTTY +P
Sbjct 233 DSIADWPDRPDNLFAVANAIAGLATGHTAIAFTNPKMVPPQNIRTEVNSRGGTTTTYFIP 292
Query 282 VNHLPLTLPLRYLGMSDAEVDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDP--LT 339
HLPL L +YLG+ + ++++D++LQP++DA Y+RND+ T P++VDPVRG DP +T
Sbjct 293 EQHLPLVLGFKYLGVPEETLNRLDAILQPRVDAGYSRNDDPATAPIAVDPVRGFDPAKVT 352
Query 340 APGS 343
AP S
Sbjct 353 APAS 356
>gi|336458231|gb|EGO37212.1| PE-PPE domain-containing protein [Mycobacterium avium subsp.
paratuberculosis S397]
Length=376
Score = 298 bits (764), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 162/354 (46%), Positives = 219/354 (62%), Gaps = 20/354 (5%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
MK+++AG A+ V AG FG AA++ P A + YALGGA
Sbjct 1 MKQLLAGVTALLSVSTAGYFGIGTAAADGGPIGG-------PPTPGAPGDQTAYALGGAH 53
Query 61 MPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLP---------PGSHQDNM 111
+ GIP+ +Y G+ +FP + ++ YPAG L P PG +
Sbjct 54 VLGIPYDQYIRMEGADWFPGQQRQIVRYPAGQVQGHVLERLFPGIGKLDESFPGLGMNGP 113
Query 112 TVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTF 171
+VG +V +G ++LD AI P A+GLS+G+ V+D EQARLANDPTAP P+ L F TF
Sbjct 114 SVGESVAEGIDNLDAAIRTTGRPGTAIGLSEGAFVVDGEQARLANDPTAPPPNTLNFATF 173
Query 172 GDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRP 231
GDP GRHAFG SFL +F GS +P ++YTMP +SQYDTN V AYD +DFPDRP
Sbjct 174 GDPIGRHAFGQSFLTAMFGVGSVVPA--LDYTMPPPYESQYDTNRFVAAYDSIADFPDRP 231
Query 232 DNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPL 291
DN+ A+AN +G A HT + FT P VPPQNIRTT+NSRGA TT ++P HLPL +PL
Sbjct 232 DNMFALANTLMGLATGHTTVAFTNPSMVPPQNIRTTINSRGAKDTTIMIPEKHLPLVMPL 291
Query 292 RYLGMSDAEVDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDP--LTAPGS 343
+Y+G+ + ++++D++L P+++A Y+RND+ T PV VDPV G DP +TAP +
Sbjct 292 KYIGIDENTLNKLDAILTPRVNAGYSRNDDPATAPVQVDPVHGFDPAEVTAPAN 345
>gi|120401302|ref|YP_951131.1| hypothetical protein Mvan_0276 [Mycobacterium vanbaalenii PYR-1]
gi|119954120|gb|ABM11125.1| PE-PPE, C-terminal domain protein [Mycobacterium vanbaalenii
PYR-1]
Length=388
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 170/356 (48%), Positives = 225/356 (64%), Gaps = 19/356 (5%)
Query 1 MKRVIAGAFAVWLVGWAG--GFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGG 58
MKR++A A+ +G AG GFG A A PA P +P P +P P+G A YALGG
Sbjct 13 MKRLLAFGTALTTIGAAGCLGFGIAAADEAPAVPPSPTPADAPPPLGTPGRA---YALGG 69
Query 59 ARMPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLP---------PGSHQD 109
A + GIP+ EY + G+ +FP ++DYPAG L P PG D
Sbjct 70 AHVLGIPYDEYIMRTGADWFPGLDRQIVDYPAGQVQGHTLERLFPGIGRLDDSFPGIGID 129
Query 110 NMTVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFT 169
+VG +V GT ++ AI G A+GLS+G++VL+ QA+LA DP AP PD+L F
Sbjct 130 GPSVGESVDVGTPNVITAIREGGR-GTAIGLSEGAMVLNDVQAKLAYDPAAPPPDQLSFA 188
Query 170 TFGDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPD 229
+GDP RHAFG SFL + FP GS +P ++Y +P V+SQYDT V+AYD +D+PD
Sbjct 189 MYGDPVARHAFGESFLTQNFPVGSVVP--SLDYRIPPPVESQYDTYQFVSAYDSIADWPD 246
Query 230 RPDNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTL 289
RPDN ++VANA +G A HT + FT P VPPQNIRTTVNSRGA TTTY++P HLPL L
Sbjct 247 RPDNWISVANAIVGLATGHTAVAFTEPSMVPPQNIRTTVNSRGAKTTTYMIPEEHLPLVL 306
Query 290 PLRYLGMSDAEVDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDP--LTAPGS 343
P +YLG+ + ++D+VL+P +DA Y+RND+ T P++VDPV G DP +TAP +
Sbjct 307 PFKYLGVPTETLIELDAVLKPFVDAGYSRNDDPLTAPITVDPVNGYDPAEVTAPAT 362
>gi|254774576|ref|ZP_05216092.1| hypothetical protein MaviaA2_07893 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=369
Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 149/304 (50%), Positives = 199/304 (66%), Gaps = 13/304 (4%)
Query 51 KVVYALGGARMPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLP------- 103
+ YALGGA + GIP+ +Y G+ +FP + ++ YPAG L P
Sbjct 37 QTAYALGGAHVLGIPYDQYIRMEGADWFPGQQRQIVRYPAGQVQGHVLERLFPGIGKLDE 96
Query 104 --PGSHQDNMTVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAP 161
PG D +VG +V +G ++LD AI P A+GLS+G+ V+D EQARLANDPTAP
Sbjct 97 SFPGLGMDGPSVGESVAEGIDNLDAAIRTTGRPGTAIGLSEGAFVVDGEQARLANDPTAP 156
Query 162 APDKLQFTTFGDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAY 221
P+ L F TFGDP GRHAFG SFL +F GS +P ++YTMP +SQYDTN V AY
Sbjct 157 PPNTLNFATFGDPIGRHAFGQSFLTAMFGVGSVVPA--LDYTMPPPYESQYDTNRFVAAY 214
Query 222 DGFSDFPDRPDNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVP 281
D +DFPDRPDN+ A+AN +G A HT + FT P VPPQNIRTT+NSRGA TT ++P
Sbjct 215 DSIADFPDRPDNMFALANTLMGLATGHTAVAFTNPSMVPPQNIRTTINSRGAKDTTIMIP 274
Query 282 VNHLPLTLPLRYLGMSDAEVDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDP--LT 339
HLPL +PL+Y+G+ + ++++D++L P+++A Y+RND+ T PV VDPV G DP +T
Sbjct 275 EKHLPLVMPLKYIGIDENTLNKLDAILTPRVNAGYSRNDDPATAPVQVDPVHGFDPAEVT 334
Query 340 APGS 343
AP +
Sbjct 335 APAN 338
>gi|118471696|ref|YP_884825.1| hypothetical protein MSMEG_0412 [Mycobacterium smegmatis str.
MC2 155]
gi|85541018|gb|ABC70855.1| PE [Mycobacterium smegmatis str. MC2 155]
gi|118172983|gb|ABK73879.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=383
Score = 288 bits (737), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 160/354 (46%), Positives = 217/354 (62%), Gaps = 15/354 (4%)
Query 2 KRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGARM 61
+R++A A +G AG G +AA++ P P P + + T YALGGA +
Sbjct 3 RRLLAFGTAFTTIGTAGFLGFGVAAADDTKPVDPAPGGAHAEAPSMGTPGRGYALGGAHV 62
Query 62 PGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLP----------PGSHQDNM 111
GIP+ EY + G+ +FP ++DYPAG L P PG D
Sbjct 63 LGIPYDEYIMRTGADWFPGLDRQIVDYPAGQVQGHTLERLFPGIGALGERFMPGLGLDGP 122
Query 112 TVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTF 171
+ G ++ G +L NAI G P +GLS+G+ VLD+ QARLA DP AP PD L F T+
Sbjct 123 SYGESIDVGAPNLINAIRQG-GPGTVIGLSEGASVLDEVQARLAYDPAAPPPDSLSFATY 181
Query 172 GDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRP 231
G+P G+HAFG SFL ++FP GS +P ++Y +P V+SQYDT V+AYD +D+PDRP
Sbjct 182 GNPVGKHAFGESFLTQMFPVGSVVPS--LDYRIPAPVESQYDTYQFVSAYDSIADWPDRP 239
Query 232 DNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPL 291
DN ++VANA +G A HT + FT P VPPQNIRTTVNSRGA TT ++P HLPL LP
Sbjct 240 DNWISVANAIVGLATGHTAVAFTNPSMVPPQNIRTTVNSRGAKDTTIMIPEEHLPLVLPF 299
Query 292 RYLGMSDAEVDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDP--LTAPGS 343
+YLG+ ++++D VL+P +DA Y+RND+ T P++VDPV G DP +TAP +
Sbjct 300 KYLGVDKDTLNKLDGVLKPYVDAGYSRNDDPLTAPITVDPVNGYDPAAVTAPAT 353
>gi|108797228|ref|YP_637425.1| PE-PPE-like protein [Mycobacterium sp. MCS]
gi|119866313|ref|YP_936265.1| hypothetical protein Mkms_0258 [Mycobacterium sp. KMS]
gi|108767647|gb|ABG06369.1| PE-PPE-like protein [Mycobacterium sp. MCS]
gi|119692402|gb|ABL89475.1| PE-PPE, C-terminal domain protein [Mycobacterium sp. KMS]
Length=377
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 148/301 (50%), Positives = 197/301 (66%), Gaps = 14/301 (4%)
Query 54 YALGGARMPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLP---------P 104
YALGGA + GIP+ EY + GS +FP ++DYPAG L P P
Sbjct 52 YALGGAHVLGIPYDEYIMRTGSDWFPGLDRQIVDYPAGQVQGHTLERLFPGIGRLDDSFP 111
Query 105 GSHQDNMTVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPD 164
G D +VG +V GT ++ NA+ G A+GLS+G++VL+ QA+LA DP AP PD
Sbjct 112 GLGIDGPSVGESVDVGTPNVINAVREGGR-GTAIGLSEGAMVLNDVQAKLAYDPAAPPPD 170
Query 165 KLQFTTFGDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGF 224
+L F +GDP RHAFG SFL + FP GS +P ++Y +P V+SQYDT H V+AYD
Sbjct 171 ELSFAMYGDPVARHAFGESFLTQNFPVGSVVP--SLDYRIPAPVESQYDTYHFVSAYDSI 228
Query 225 SDFPDRPDNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNH 284
+D+PDRPDN ++VANA +G A HT + FT P VP +NIRTTVNSRGA TTT+++P H
Sbjct 229 ADWPDRPDNWISVANAIVGLATGHTAVAFTEPSMVPERNIRTTVNSRGAKTTTFMIPEEH 288
Query 285 LPLTLPLRYLGMSDAEVDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDP--LTAPG 342
LPL LP +YLG+ + ++DSVL+P +DA Y+RND+ T P++VDPV G DP +TAP
Sbjct 289 LPLVLPFKYLGVPKDTLMELDSVLKPYVDAGYSRNDDPLTAPITVDPVNGYDPAEVTAPA 348
Query 343 S 343
+
Sbjct 349 T 349
>gi|126432851|ref|YP_001068542.1| hypothetical protein Mjls_0238 [Mycobacterium sp. JLS]
gi|126232651|gb|ABN96051.1| PE-PPE, C-terminal domain protein [Mycobacterium sp. JLS]
Length=377
Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 148/301 (50%), Positives = 197/301 (66%), Gaps = 14/301 (4%)
Query 54 YALGGARMPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLP---------P 104
YALGGA + GIP+ EY + GS +FP ++DYPAG L P P
Sbjct 52 YALGGAHVLGIPYDEYIMRTGSDWFPGLDRQIVDYPAGQVQGHTLERLFPGIGRLDDSFP 111
Query 105 GSHQDNMTVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPD 164
G D +VG +V GT ++ NA+ G A+GLS+G++VL+ QA+LA DP AP PD
Sbjct 112 GLGIDGPSVGESVDVGTPNVINAVREGGR-GTAIGLSEGAMVLNDVQAKLAYDPAAPPPD 170
Query 165 KLQFTTFGDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGF 224
+L F +GDP RHAFG SFL + FP GS +P ++Y +P V+SQYDT H V+AYD
Sbjct 171 ELSFAMYGDPVARHAFGESFLTQNFPVGSVVP--SLDYRIPAPVESQYDTYHFVSAYDSI 228
Query 225 SDFPDRPDNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNH 284
+D+PDRPDN ++VANA +G A HT + FT P VP +NIRTTVNSRGA TTT+++P H
Sbjct 229 ADWPDRPDNWISVANAIVGLATGHTAVAFTEPSMVPERNIRTTVNSRGAQTTTFMIPEEH 288
Query 285 LPLTLPLRYLGMSDAEVDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDP--LTAPG 342
LPL LP +YLG+ + ++DSVL+P +DA Y+RND+ T P++VDPV G DP +TAP
Sbjct 289 LPLVLPFKYLGVPKDTLMELDSVLKPYVDAGYSRNDDPLTAPITVDPVNGYDPAEVTAPA 348
Query 343 S 343
+
Sbjct 349 T 349
>gi|145221005|ref|YP_001131683.1| hypothetical protein Mflv_0401 [Mycobacterium gilvum PYR-GCK]
gi|315442023|ref|YP_004074902.1| PE-PPE domain-containing protein [Mycobacterium sp. Spyr1]
gi|145213491|gb|ABP42895.1| PE-PPE, C-terminal domain protein [Mycobacterium gilvum PYR-GCK]
gi|315260326|gb|ADT97067.1| PE-PPE domain-containing protein [Mycobacterium sp. Spyr1]
Length=380
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/302 (50%), Positives = 196/302 (65%), Gaps = 15/302 (4%)
Query 54 YALGGARMPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLP---------- 103
YALGGA + GIP+ EY + G+ +FP +++DYPAG L P
Sbjct 56 YALGGAHVLGIPYDEYIMRTGADWFPGLDREIVDYPAGQVQGHTLERLFPGIGAFGDRIA 115
Query 104 PGSHQDNMTVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAP 163
PG D + G ++ G +L AI G P A+GLS+G+ VLD+ QARLA DP AP P
Sbjct 116 PGLGLDGPSYGESIDVGAPNLIGAIRRG-GPGTAIGLSEGASVLDEVQARLAYDPAAPPP 174
Query 164 DKLQFTTFGDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDG 223
D+L F T+G+P G+HAFG SFL + FP GS +P ++Y +P V+SQYDT V+AYD
Sbjct 175 DQLSFATYGNPVGKHAFGESFLTQNFPVGSVVP--SLDYRIPAPVESQYDTYKFVSAYDS 232
Query 224 FSDFPDRPDNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVN 283
+D+PDRPDN L+VANA +G A HT + FT P VP +NIRTTVNSRGATTTTY++P
Sbjct 233 IADWPDRPDNWLSVANAIVGLATGHTAVAFTDPSMVPERNIRTTVNSRGATTTTYMIPEE 292
Query 284 HLPLTLPLRYLGMSDAEVDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDP--LTAP 341
HLPL LP +YLG+ + ++D VL P +DA Y+RND+ T P++VDPV G DP +TAP
Sbjct 293 HLPLVLPFKYLGVPKDTLMELDKVLLPYVDAGYSRNDDPATAPITVDPVNGYDPAEVTAP 352
Query 342 GS 343
+
Sbjct 353 AT 354
>gi|169628033|ref|YP_001701682.1| hypothetical protein MAB_0936c [Mycobacterium abscessus ATCC
19977]
gi|146760176|emb|CAJ77673.1| PE protein [Mycobacterium abscessus]
gi|169240000|emb|CAM61028.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=388
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/305 (46%), Positives = 191/305 (63%), Gaps = 15/305 (4%)
Query 51 KVVYALGGARMPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLP------- 103
+ YALGGA + GIP+ EY G +FPN K + + YPAG P
Sbjct 55 RTAYALGGAHVLGIPYDEYIRMTGKDWFPNMKRENVWYPAGQVQGHTLERFFPGIGPIGE 114
Query 104 ---PGSHQDNMTVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTA 160
PG D ++G ++ G +L+NAI G P A+GLS+G+LVL+ + LA DPTA
Sbjct 115 KILPGLGLDGPSIGESIDIGEPNLENAIRSG-GPGTAMGLSEGALVLNAVKNALATDPTA 173
Query 161 PAPDKLQFTTFGDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTA 220
P P+ L F TFGDP + F SFL + F PGS +P F++Y +P +VDSQY T+ ++A
Sbjct 174 PEPESLTFATFGDPIAKSPFSESFLTQNFAPGSVVP--FMDYPVPARVDSQYHTDQFISA 231
Query 221 YDGFSDFPDRPDNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLV 280
YD +D+PDRPDNL A+ANA G A HT + FT P VP +NI T NSRG TTTTY +
Sbjct 232 YDSIADWPDRPDNLFALANAIAGLATGHTAVAFTNPKMVPARNIVTETNSRGGTTTTYFI 291
Query 281 PVNHLPLTLPLRYLGMSDAEVDQIDSVLQPQIDAAYARNDNWFTRPVSVDPVRGLDP--L 338
P HLPL + +YLG+ + ++++D++LQP++DA Y+RND+ T P++VDP RG DP +
Sbjct 292 PEQHLPLVMGFKYLGVPEETLNRLDAILQPRVDAGYSRNDDPATAPIAVDPRRGFDPAEV 351
Query 339 TAPGS 343
TAP S
Sbjct 352 TAPAS 356
>gi|31794996|ref|NP_857489.1| hypothetical protein Mb3852 [Mycobacterium bovis AF2122/97]
gi|31620594|emb|CAD96038.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
Length=404
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 130/319 (41%), Positives = 174/319 (55%), Gaps = 37/319 (11%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
+ +++ GA A ++ +A G IA+++ A PG PSP + +Y A
Sbjct 40 VTKLLVGAIAGGMLAYAAILGDGIASADTAL-IVPGTAPSPY-----GPLRSLYHFNPAM 93
Query 61 MPGIPWYEYTNQAGSQYF-PNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKD 119
P Q G+ Y+ P A ++ YP S+WP L ++ TVG +V
Sbjct 94 QP---------QIGANYYTPTATRHVVSYPG----SFWPVTGL------NSPTVGSSVSA 134
Query 120 GTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHA 179
GTN+LD AI P GLSQG+LVLD+EQARLANDPTAP P +L F GDP
Sbjct 135 GTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPN---- 190
Query 180 FGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVAN 239
+ L R F PG+H+PI I+YT+P V+SQYDT ++V YD FSD P+RP NLLA N
Sbjct 191 ---NLLWRAFRPGTHVPI--IDYTVPAPVESQYDTINIVGQYDIFSDPPNRPGNLLADLN 245
Query 240 A-AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYL-GMS 297
A A G H+ F+ P V P++I TT NS GATTTTY + + LPL L + G+
Sbjct 246 AIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLP 305
Query 298 DAEVDQIDSVLQPQIDAAY 316
+D+ L+P ID AY
Sbjct 306 PQAAGTVDAALRPIIDRAY 324
>gi|167969937|ref|ZP_02552214.1| hypothetical protein MtubH3_18668 [Mycobacterium tuberculosis
H37Ra]
gi|254552938|ref|ZP_05143385.1| hypothetical protein Mtube_21259 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length=365
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/319 (41%), Positives = 172/319 (54%), Gaps = 37/319 (11%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
M +++ GA A ++ A G IA+++ A PG PSP + +Y A
Sbjct 1 MTKLLVGAIAGGMLACAAILGDGIASADTAL-IVPGTAPSPY-----GPLRSLYHFNPAM 54
Query 61 MPGIPWYEYTNQAGSQYF-PNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKD 119
P Q G+ Y+ P A ++ YP S+WP L ++ TVG +V
Sbjct 55 QP---------QIGANYYNPTATRHVVSYPG----SFWPVTGL------NSPTVGSSVSA 95
Query 120 GTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHA 179
GTN+LD AI P GLSQG+LVLD+EQARLANDPTAP P +L F GDP
Sbjct 96 GTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPN---- 151
Query 180 FGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVAN 239
+ L R F PG+H+PI I+YT+P +SQYDT ++V YD FSD P+RP NLLA N
Sbjct 152 ---NLLWRAFRPGTHVPI--IDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLN 206
Query 240 A-AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYL-GMS 297
A A G H+ F+ P V P++I TT NS GATTTTY + + LPL L + G+
Sbjct 207 AIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLP 266
Query 298 DAEVDQIDSVLQPQIDAAY 316
+D+ L+P ID AY
Sbjct 267 PQAAGTVDAALRPIIDRAY 285
>gi|289445423|ref|ZP_06435167.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289572474|ref|ZP_06452701.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|339633817|ref|YP_004725459.1| hypothetical protein MAF_38370 [Mycobacterium africanum GM041182]
gi|289418381|gb|EFD15582.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289536905|gb|EFD41483.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|339333173|emb|CCC28906.1| unnamed protein product [Mycobacterium africanum GM041182]
Length=404
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/319 (41%), Positives = 173/319 (55%), Gaps = 37/319 (11%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
+ +++ GA A ++ A G IA+++ A PG PSP + +Y A
Sbjct 40 VTKLLVGAIAGGMLACAAILGDGIASADTAL-IVPGTAPSPY-----GPLRSLYHFNPAM 93
Query 61 MPGIPWYEYTNQAGSQYF-PNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKD 119
P Q G+ Y+ P A ++ YP S+WP L ++ TVG +V
Sbjct 94 QP---------QIGANYYTPTATRHVVSYPG----SFWPVTGL------NSPTVGSSVSA 134
Query 120 GTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHA 179
GTN+LD AI P GLSQG+LVLD+EQARLANDPTAP P +L F GDP
Sbjct 135 GTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPN---- 190
Query 180 FGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVAN 239
+ L R F PG+H+PI I+YT+P V+SQYDT ++V YD FSD P+RP NLLA N
Sbjct 191 ---NLLWRAFRPGTHVPI--IDYTVPAPVESQYDTINIVGQYDIFSDPPNRPGNLLADLN 245
Query 240 A-AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYL-GMS 297
A A G H+ F+ P V P++I TT NS GATTTTY + + LPL L + G+
Sbjct 246 AIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLP 305
Query 298 DAEVDQIDSVLQPQIDAAY 316
+D+ L+P ID AY
Sbjct 306 PQAAGTVDAALRPIIDRAY 324
>gi|289572075|ref|ZP_06452302.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289748352|ref|ZP_06507730.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289755955|ref|ZP_06515333.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289545829|gb|EFD49477.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289688939|gb|EFD56368.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289696542|gb|EFD63971.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=404
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/319 (41%), Positives = 173/319 (55%), Gaps = 37/319 (11%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
+ +++ GA A ++ A G IA+++ A PG PSP + +Y A
Sbjct 40 VTKLLVGAIAGGMLACAAILGDGIASADTAL-IVPGTAPSPY-----GPLRSLYHFNPAM 93
Query 61 MPGIPWYEYTNQAGSQYF-PNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKD 119
P Q G+ Y+ P A ++ YP S+WP L ++ TVG +V
Sbjct 94 QP---------QIGANYYNPTATRHVVSYPG----SFWPVTGL------NSPTVGSSVSA 134
Query 120 GTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHA 179
GTN+LD AI P GLSQG+LVLD+EQARLANDPTAP P +L F GDP
Sbjct 135 GTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPN---- 190
Query 180 FGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVAN 239
+ L R F PG+H+PI I+YT+P V+SQYDT ++V YD FSD P+RP NLLA N
Sbjct 191 ---NLLWRAFRPGTHVPI--IDYTVPAPVESQYDTINIVGQYDIFSDPPNRPGNLLADLN 245
Query 240 A-AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYL-GMS 297
A A G H+ F+ P V P++I TT NS GATTTTY + + LPL L + G+
Sbjct 246 AIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLP 305
Query 298 DAEVDQIDSVLQPQIDAAY 316
+D+ L+P ID AY
Sbjct 306 PQAAGTVDAALRPIIDRAY 324
>gi|340628791|ref|YP_004747243.1| hypothetical protein MCAN_38411 [Mycobacterium canettii CIPT
140010059]
gi|340006981|emb|CCC46172.1| unnamed protein product [Mycobacterium canettii CIPT 140010059]
Length=405
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/319 (41%), Positives = 172/319 (54%), Gaps = 37/319 (11%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
+ +++ GA A ++ A G IA+++ A PG PSP + +Y A
Sbjct 40 VTKLLVGAIAGGMLACAAILGDGIASADTAL-IVPGTAPSPY-----GPLRSLYHFNPAM 93
Query 61 MPGIPWYEYTNQAGSQYF-PNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKD 119
P Q G+ Y+ P A ++ YP S+WP L ++ TVG +V
Sbjct 94 QP---------QIGANYYNPTATRHVVSYPG----SFWPVTGL------NSPTVGSSVSA 134
Query 120 GTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHA 179
GTN+LD AI P GLSQG+LVLD+EQARLANDPTAP P +L F GDP
Sbjct 135 GTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPN---- 190
Query 180 FGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVAN 239
+ L R F PG+H+PI I+Y +P V+SQYDT ++V YD FSD P+RP NLLA N
Sbjct 191 ---NLLWRAFRPGTHVPI--IDYIVPAPVESQYDTINIVGQYDIFSDPPNRPGNLLADLN 245
Query 240 A-AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYL-GMS 297
A A G H+ F+ P V P++I TT NS GATTTTY + + LPL L + G+
Sbjct 246 AIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLP 305
Query 298 DAEVDQIDSVLQPQIDAAY 316
+D+ L+P ID AY
Sbjct 306 PQAAGTVDAALRPMIDRAY 324
>gi|308372753|ref|ZP_07429728.2| hypothetical protein TMEG_00320 [Mycobacterium tuberculosis SUMu005]
gi|308340016|gb|EFP28867.1| hypothetical protein TMEG_00320 [Mycobacterium tuberculosis SUMu005]
Length=387
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/319 (41%), Positives = 172/319 (54%), Gaps = 37/319 (11%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
+ +++ GA A ++ A G IA+++ A PG PSP + +Y A
Sbjct 23 VTKLLVGAIAGGMLACAAILGDGIASADTAL-IVPGTAPSPY-----GPLRSLYHFNPAM 76
Query 61 MPGIPWYEYTNQAGSQYF-PNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKD 119
P Q G+ Y+ P A ++ YP S+WP L ++ TVG +V
Sbjct 77 QP---------QIGANYYNPTATRHVVSYPG----SFWPVTGL------NSPTVGSSVSA 117
Query 120 GTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHA 179
GTN+LD AI P GLSQG+LVLD+EQARLANDPTAP P +L F GDP
Sbjct 118 GTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPN---- 173
Query 180 FGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVAN 239
+ L R F PG+H+PI I+YT+P +SQYDT ++V YD FSD P+RP NLLA N
Sbjct 174 ---NLLWRAFRPGTHVPI--IDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLN 228
Query 240 A-AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYL-GMS 297
A A G H+ F+ P V P++I TT NS GATTTTY + + LPL L + G+
Sbjct 229 AIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLP 288
Query 298 DAEVDQIDSVLQPQIDAAY 316
+D+ L+P ID AY
Sbjct 289 PQAAGTVDAALRPIIDRAY 307
>gi|15610958|ref|NP_218339.1| hypothetical protein Rv3822 [Mycobacterium tuberculosis H37Rv]
gi|148663690|ref|YP_001285213.1| hypothetical protein MRA_3862 [Mycobacterium tuberculosis H37Ra]
gi|148825029|ref|YP_001289783.1| hypothetical protein TBFG_13856 [Mycobacterium tuberculosis F11]
26 more sequence titles
Length=404
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/319 (41%), Positives = 172/319 (54%), Gaps = 37/319 (11%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
+ +++ GA A ++ A G IA+++ A PG PSP + +Y A
Sbjct 40 VTKLLVGAIAGGMLACAAILGDGIASADTAL-IVPGTAPSPY-----GPLRSLYHFNPAM 93
Query 61 MPGIPWYEYTNQAGSQYF-PNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKD 119
P Q G+ Y+ P A ++ YP S+WP L ++ TVG +V
Sbjct 94 QP---------QIGANYYNPTATRHVVSYPG----SFWPVTGL------NSPTVGSSVSA 134
Query 120 GTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHA 179
GTN+LD AI P GLSQG+LVLD+EQARLANDPTAP P +L F GDP
Sbjct 135 GTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPN---- 190
Query 180 FGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVAN 239
+ L R F PG+H+PI I+YT+P +SQYDT ++V YD FSD P+RP NLLA N
Sbjct 191 ---NLLWRAFRPGTHVPI--IDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLN 245
Query 240 A-AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYL-GMS 297
A A G H+ F+ P V P++I TT NS GATTTTY + + LPL L + G+
Sbjct 246 AIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLP 305
Query 298 DAEVDQIDSVLQPQIDAAY 316
+D+ L+P ID AY
Sbjct 306 PQAAGTVDAALRPIIDRAY 324
>gi|308232581|ref|ZP_07416523.2| hypothetical protein TMAG_00570 [Mycobacterium tuberculosis SUMu001]
gi|308369245|ref|ZP_07417052.2| hypothetical protein TMBG_02362 [Mycobacterium tuberculosis SUMu002]
gi|308371468|ref|ZP_07425063.2| hypothetical protein TMCG_01329 [Mycobacterium tuberculosis SUMu003]
17 more sequence titles
Length=380
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 129/319 (41%), Positives = 172/319 (54%), Gaps = 37/319 (11%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
+ +++ GA A ++ A G IA+++ A PG PSP + +Y A
Sbjct 16 VTKLLVGAIAGGMLACAAILGDGIASADTAL-IVPGTAPSPY-----GPLRSLYHFNPAM 69
Query 61 MPGIPWYEYTNQAGSQYF-PNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKD 119
P Q G+ Y+ P A ++ YP S+WP L ++ TVG +V
Sbjct 70 QP---------QIGANYYNPTATRHVVSYPG----SFWPVTGL------NSPTVGSSVSA 110
Query 120 GTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHA 179
GTN+LD AI P GLSQG+LVLD+EQARLANDPTAP P +L F GDP
Sbjct 111 GTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPN---- 166
Query 180 FGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVAN 239
+ L R F PG+H+PI I+YT+P +SQYDT ++V YD FSD P+RP NLLA N
Sbjct 167 ---NLLWRAFRPGTHVPI--IDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLN 221
Query 240 A-AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYL-GMS 297
A A G H+ F+ P V P++I TT NS GATTTTY + + LPL L + G+
Sbjct 222 AIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLP 281
Query 298 DAEVDQIDSVLQPQIDAAY 316
+D+ L+P ID AY
Sbjct 282 PQAAGTVDAALRPIIDRAY 300
>gi|15843446|ref|NP_338483.1| hypothetical protein MT3930 [Mycobacterium tuberculosis CDC1551]
gi|13883816|gb|AAK48297.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length=404
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 129/319 (41%), Positives = 172/319 (54%), Gaps = 37/319 (11%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
+ +++ GA A ++ A G IA+++ A PG PSP + +Y A
Sbjct 40 VTKLLVGAIAGGMLACAAILGDGIASADTAL-IVPGTAPSPY-----GPLRSLYHFNPAM 93
Query 61 MPGIPWYEYTNQAGSQYF-PNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKD 119
P Q G+ Y+ P A ++ YP S+WP L ++ TVG +V
Sbjct 94 QP---------QIGANYYNPTATRHVVSYPG----SFWPVTGL------NSPTVGNSVSA 134
Query 120 GTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHA 179
GTN+LD AI P GLSQG+LVLD+EQARLANDPTAP P +L F GDP
Sbjct 135 GTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPN---- 190
Query 180 FGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVAN 239
+ L R F PG+H+PI I+YT+P +SQYDT ++V YD FSD P+RP NLLA N
Sbjct 191 ---NLLWRAFRPGTHVPI--IDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLN 245
Query 240 A-AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYL-GMS 297
A A G H+ F+ P V P++I TT NS GATTTTY + + LPL L + G+
Sbjct 246 AIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLP 305
Query 298 DAEVDQIDSVLQPQIDAAY 316
+D+ L+P ID AY
Sbjct 306 PQAAGTVDAALRPIIDRAY 324
>gi|298527297|ref|ZP_07014706.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|298497091|gb|EFI32385.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=312
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 114/248 (46%), Positives = 146/248 (59%), Gaps = 22/248 (8%)
Query 72 QAGSQYF-PNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDGTNSLDNAIHH 130
Q G+ Y+ P A ++ YP S+WP L ++ TVG +V GTN+LD AI
Sbjct 4 QIGANYYNPTATRHVVSYPG----SFWPVTGL------NSPTVGSSVSAGTNNLDAAIRS 53
Query 131 GTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAFGASFLARIFP 190
P VGLSQG+LVLD+EQARLANDPTAP P +L F GDP + L R F
Sbjct 54 TDGPIFVVGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPN-------NLLWRAFR 106
Query 191 PGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANA-AIGAAIAHT 249
PG+H+PI I+YT+P +SQYDT ++V YD FSD P+RP NLLA NA A G H+
Sbjct 107 PGTHVPI--IDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHS 164
Query 250 PIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYL-GMSDAEVDQIDSVL 308
F+ P V P++I TT NS GATTTTY + + LPL L + G+ +D+ L
Sbjct 165 ATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAAL 224
Query 309 QPQIDAAY 316
+P ID AY
Sbjct 225 RPIIDRAY 232
>gi|323717489|gb|EGB26692.1| hypothetical protein TMMG_00316 [Mycobacterium tuberculosis CDC1551A]
Length=312
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/248 (46%), Positives = 145/248 (59%), Gaps = 22/248 (8%)
Query 72 QAGSQYF-PNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDGTNSLDNAIHH 130
Q G+ Y+ P A ++ YP S+WP L ++ TVG +V GTN+LD AI
Sbjct 4 QIGANYYNPTATRHVVSYPG----SFWPVTGL------NSPTVGNSVSAGTNNLDAAIRS 53
Query 131 GTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAFGASFLARIFP 190
P GLSQG+LVLD+EQARLANDPTAP P +L F GDP + L R F
Sbjct 54 TDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPN-------NLLWRAFR 106
Query 191 PGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANA-AIGAAIAHT 249
PG+H+PI I+YT+P +SQYDT ++V YD FSD P+RP NLLA NA A G H+
Sbjct 107 PGTHVPI--IDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHS 164
Query 250 PIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYL-GMSDAEVDQIDSVL 308
F+ P V P++I TT NS GATTTTY + + LPL L + G+ +D+ L
Sbjct 165 ATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAAL 224
Query 309 QPQIDAAY 316
+P ID AY
Sbjct 225 RPIIDRAY 232
>gi|342860079|ref|ZP_08716731.1| hypothetical protein MCOL_14410 [Mycobacterium colombiense CECT
3035]
gi|342132457|gb|EGT85686.1| hypothetical protein MCOL_14410 [Mycobacterium colombiense CECT
3035]
Length=373
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/318 (40%), Positives = 167/318 (53%), Gaps = 35/318 (11%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
M ++AG+ A ++ + FG +A+++ A PG PSP + +Y A
Sbjct 1 MNGLLAGSAAAGMLAVSMTFGDGVASADTAL-IVPGTAPSPY-----GPLRSLYHFNPAT 54
Query 61 MPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDG 120
P I + Y P+A +I YPA S+WP L ++ TV +V G
Sbjct 55 APQI--------DANYYSPDATRRVISYPA----SFWPVTGL------NSPTVDSSVNTG 96
Query 121 TNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAF 180
TN+LD AI P + GLSQG+L LD+EQARLA DP AP PD+L F GDP
Sbjct 97 TNNLDAAIRGTGGPISVAGLSQGTLALDREQARLARDPGAPPPDQLTFIKAGDPN----- 151
Query 181 GASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANA 240
+ LA+ F PG+H+PI I+YT+PQ V+SQY T ++V YD FSD P+ P NLLA NA
Sbjct 152 --NLLAKAFGPGAHVPI--IDYTVPQPVESQYRTVNIVGQYDPFSDPPNHPGNLLADLNA 207
Query 241 -AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPL-RYLGMSD 298
G H+ F+ P V P +IR NS G TTTTY + LPL L GM
Sbjct 208 ICAGGYYGHSATAFSDPSRVAPWDIRRETNSLGGTTTTYFIRNPQLPLARALVDGAGMPP 267
Query 299 AEVDQIDSVLQPQIDAAY 316
V ID+ L+P ID AY
Sbjct 268 EAVGPIDAALRPLIDRAY 285
>gi|121639740|ref|YP_979964.1| hypothetical protein BCG_3885 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224992235|ref|YP_002646925.1| hypothetical protein JTY_3887 [Mycobacterium bovis BCG str. Tokyo
172]
gi|121495388|emb|CAL73875.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224775351|dbj|BAH28157.1| hypothetical protein JTY_3887 [Mycobacterium bovis BCG str. Tokyo
172]
Length=282
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 103/207 (50%), Positives = 128/207 (62%), Gaps = 11/207 (5%)
Query 112 TVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTF 171
TVG +V GTN+LD AI P GLSQG+LVLD+EQARLANDPTAP P +L F
Sbjct 5 TVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKA 64
Query 172 GDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRP 231
GDP + L R F PG+H+PI I+YT+P V+SQYDT ++V YD FSD P+RP
Sbjct 65 GDPN-------NLLWRAFRPGTHVPI--IDYTVPAPVESQYDTINIVGQYDIFSDPPNRP 115
Query 232 DNLLAVANA-AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLP 290
NLLA NA A G H+ F+ P V P++I TT NS GATTTTY + + LPL
Sbjct 116 GNLLADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRA 175
Query 291 LRYL-GMSDAEVDQIDSVLQPQIDAAY 316
L + G+ +D+ L+P ID AY
Sbjct 176 LVDMAGLPPQAAGTVDAALRPIIDRAY 202
>gi|341603761|emb|CCC66442.1| conserved hypothetical protein [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=287
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/207 (50%), Positives = 128/207 (62%), Gaps = 11/207 (5%)
Query 112 TVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTF 171
TVG +V GTN+LD AI P GLSQG+LVLD+EQARLANDPTAP P +L F
Sbjct 10 TVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKA 69
Query 172 GDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRP 231
GDP + L R F PG+H+PI I+YT+P V+SQYDT ++V YD FSD P+RP
Sbjct 70 GDPN-------NLLWRAFRPGTHVPI--IDYTVPAPVESQYDTINIVGQYDIFSDPPNRP 120
Query 232 DNLLAVANA-AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLP 290
NLLA NA A G H+ F+ P V P++I TT NS GATTTTY + + LPL
Sbjct 121 GNLLADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRA 180
Query 291 LRYL-GMSDAEVDQIDSVLQPQIDAAY 316
L + G+ +D+ L+P ID AY
Sbjct 181 LVDMAGLPPQAAGTVDAALRPIIDRAY 207
>gi|296166954|ref|ZP_06849370.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897693|gb|EFG77283.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=363
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/318 (39%), Positives = 165/318 (52%), Gaps = 35/318 (11%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSPSPVGDASTAKVVYALGGAR 60
M +++AGA V ++ W F +AA++ A PG PSP + +Y A
Sbjct 1 MNKLLAGAVVVGMLTWVTVFDDNVAAADTAL-IVPGTAPSPY-----GPLRSLYHFNPAM 54
Query 61 MPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDG 120
P I + Y P A ++ YP S+WP L ++ TV +V G
Sbjct 55 QPQI--------DANYYSPAAVRRVVPYPG----SFWPVTGL------NSPTVNSSVTTG 96
Query 121 TNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAF 180
++LD AI P + GLSQGSL LD+EQARLA+DPTAP P +L F G+P
Sbjct 97 ADNLDAAIRTTDGPISVAGLSQGSLALDREQARLAHDPTAPPPGRLTFIKAGNPD----- 151
Query 181 GASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANA 240
+ L + F PG+H+PI I+YT+P V SQYDT ++V YD FSD P+ P NLLA NA
Sbjct 152 --NLLYKAFGPGTHVPI--IDYTVPPPVQSQYDTINIVGQYDPFSDPPNHPGNLLADLNA 207
Query 241 -AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPL-RYLGMSD 298
A G HT F+ P V P +I T NS G T+TTY + + LPL L GM
Sbjct 208 VAAGGYYGHTATAFSDPSRVAPWDITRTTNSLGGTSTTYFIRNSELPLARALVDGAGMPP 267
Query 299 AEVDQIDSVLQPQIDAAY 316
V ID+ L+P +D AY
Sbjct 268 EAVGPIDAALRPLVDRAY 285
>gi|289441259|ref|ZP_06431003.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289414178|gb|EFD11418.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length=314
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/284 (42%), Positives = 155/284 (55%), Gaps = 38/284 (13%)
Query 1 MKRVIAGAFAVWLVGWAGGFGTAIAASEPAYPWAPGPPPSP-SPVGDASTAKVVYALGGA 59
+ +++ GA A ++ A G IA+++ A PG PSP P+ + +Y A
Sbjct 40 VTKLLVGAIAGGMLACAAILGDGIASADTAL-IVPGTAPSPYGPL------RSLYHFNPA 92
Query 60 RMPGIPWYEYTNQAGSQYF-PNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVK 118
P Q G+ Y+ P A ++ YP S+WP L ++ TVG +V
Sbjct 93 MQP---------QIGANYYNPTATRHVVSYPG----SFWPVTGL------NSPTVGSSVS 133
Query 119 DGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRH 178
GTN+LD AI P GLSQG+LVLD+EQARLANDPTAP P +L F GDP
Sbjct 134 AGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPN--- 190
Query 179 AFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVA 238
+ L R F PG+H+PI I+YT+P V+SQYDT ++V YD FSD P+RP NLLA
Sbjct 191 ----NLLWRAFRPGTHVPI--IDYTVPAPVESQYDTINIVGQYDIFSDPPNRPGNLLADL 244
Query 239 NA-AIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVP 281
NA A G H+ F+ P V P++I TT NS GATT L P
Sbjct 245 NAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTNELLHP 288
>gi|339296630|gb|AEJ48741.1| hypothetical protein CCDC5079_3552 [Mycobacterium tuberculosis
CCDC5079]
Length=253
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 113/180 (63%), Gaps = 11/180 (6%)
Query 139 GLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAFGASFLARIFPPGSHIPIP 198
GLSQG+LVLD+EQARLANDPTAP P +L F GDP + L R F PG+H+PI
Sbjct 3 GLSQGTLVLDREQARLANDPTAPPPGQLTFIKAGDPN-------NLLWRAFRPGTHVPI- 54
Query 199 FIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANA-AIGAAIAHTPIGFTGPG 257
I+YT+P +SQYDT ++V YD FSD P+RP NLLA NA A G H+ F+ P
Sbjct 55 -IDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNLLADLNAIAAGGYYGHSATAFSDPA 113
Query 258 DVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYL-GMSDAEVDQIDSVLQPQIDAAY 316
V P++I TT NS GATTTTY + + LPL L + G+ +D+ L+P ID AY
Sbjct 114 RVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPIIDRAY 173
>gi|108798703|ref|YP_638900.1| PE-PPE-like protein [Mycobacterium sp. MCS]
gi|119867821|ref|YP_937773.1| hypothetical protein Mkms_1782 [Mycobacterium sp. KMS]
gi|126434304|ref|YP_001069995.1| hypothetical protein Mjls_1714 [Mycobacterium sp. JLS]
gi|108769122|gb|ABG07844.1| PE-PPE-like protein [Mycobacterium sp. MCS]
gi|119693910|gb|ABL90983.1| PE-PPE, C-terminal domain protein [Mycobacterium sp. KMS]
gi|126234104|gb|ABN97504.1| PE-PPE, C-terminal domain protein [Mycobacterium sp. JLS]
Length=307
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/213 (44%), Positives = 121/213 (57%), Gaps = 12/213 (5%)
Query 111 MTVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPT--APAPDKLQF 168
M VAV G L A+ P + VG+SQGSLVL +++ R+ P PA D+L+F
Sbjct 71 MNESVAV--GAGRLGEAVATTKGPKSLVGVSQGSLVLHEQERRIMALPEDQRPADDELRF 128
Query 169 TTFGDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQV-DSQYDTNHVVTAYDGFSDF 227
GDP A + +A P G + +P I + P + ++ Y+T +V YDG +DF
Sbjct 129 VYIGDP----ARPSGGVANWVPEG--VRVPGIGLSRPAPLAETPYETVYVTREYDGIADF 182
Query 228 PDRPDNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPL 287
PDRP NLLA ANA +G A H G DVP NI T N++G TT+YLVP N LPL
Sbjct 183 PDRPLNLLATANAVMGVAYLHPNYGVD-LSDVPEDNITETTNTKGGRTTSYLVPTNDLPL 241
Query 288 TLPLRYLGMSDAEVDQIDSVLQPQIDAAYARND 320
T PLR LG+ VD++D L+P ID+ Y RND
Sbjct 242 TKPLRQLGVDRRIVDEVDKRLRPVIDSGYKRND 274
>gi|120401776|ref|YP_951605.1| hypothetical protein Mvan_0761 [Mycobacterium vanbaalenii PYR-1]
gi|119954594|gb|ABM11599.1| PE-PPE, C-terminal domain protein [Mycobacterium vanbaalenii
PYR-1]
Length=401
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/215 (40%), Positives = 113/215 (53%), Gaps = 15/215 (6%)
Query 108 QDNMTVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQ 167
Q+ + A+ DG D A+ +G S GS+V + A LA+ P P+PD ++
Sbjct 77 QNPFSTDRALLDGVERADVAVREIDGQVVVIGESMGSMVASRLAADLAHSPDPPSPDDIR 136
Query 168 FTTFGDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDF 227
F P +A+ F G+ IP+ + YT+ + S Y T V YDG++D
Sbjct 137 FVLIASPE-------EGVAQYFKEGTRIPL--LNYTVSRVAQSPYPTTVVFGEYDGWADP 187
Query 228 PDRPDNLLAVANAAIGAAIAHTPIGF-TGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLP 286
PDRP NL+AVANAA+G H P + DVPP+NI TV+ T T Y VP HLP
Sbjct 188 PDRPWNLVAVANAAMGLIYVHGPAMWDVDLSDVPPENI--TVD---GTVTRYFVPTEHLP 242
Query 287 LTLPLRYLGMSDAEVDQIDSVLQPQIDAAYARNDN 321
LT P R LG+ D VD D +L+P IDA Y R+D
Sbjct 243 LTRPFRDLGVPDCLVDAADHILRPIIDAGYRRHDQ 277
>gi|118473854|ref|YP_889988.1| PE family protein [Mycobacterium smegmatis str. MC2 155]
gi|118175141|gb|ABK76037.1| pe family protein [Mycobacterium smegmatis str. MC2 155]
Length=383
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/209 (38%), Positives = 111/209 (54%), Gaps = 10/209 (4%)
Query 116 AVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTA--PAPDKLQFTTFGD 173
+V G SL AI + AVG+SQG LVL + + RL P + PA +L F GD
Sbjct 75 SVAHGAGSLHAAIVSTPEGKTAVGISQGGLVLAEVKRRLMALPESDRPASGELVFIGVGD 134
Query 174 PTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDN 233
P+ L R FP G +P T+ + ++ ++T +V YDGF+DFPDR N
Sbjct 135 PSNPQGG----LLRHFPEGFRLP--GFGVTVVETPETPWNTIYVTREYDGFADFPDRVHN 188
Query 234 LLAVANAAIGAAIAHTPIGFTGPG--DVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPL 291
L+AVANA +G H G+ VP +++ T N+ G TT+YLV LPL P
Sbjct 189 LVAVANALVGIVYVHAQPGYASVDLEAVPDRDVTVTTNTLGGVTTSYLVRTERLPLLQPA 248
Query 292 RYLGMSDAEVDQIDSVLQPQIDAAYARND 320
R LG+ + V +++ L+P +DA Y RND
Sbjct 249 RDLGVPEKIVKHLEAALKPVVDAGYVRND 277
>gi|240171670|ref|ZP_04750329.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478]
Length=462
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/253 (34%), Positives = 128/253 (51%), Gaps = 17/253 (6%)
Query 67 YEYTNQA-GSQYFPNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDGTNSLD 125
YE N A G +FP L++YPA + L P + N V + + + +
Sbjct 184 YELLNHAIGQNWFPGTTAQLVNYPA--SIGILSGSLAAPTT---NDAVAMGQRALNDQIM 238
Query 126 NAIHHGT-DPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAFGASF 184
NA +G+ P GLS+G++V+++E A LA +P+AP P LQF F P G
Sbjct 239 NAFANGSGSPVHIAGLSEGTIVVNRELAYLAANPSAPPPHALQFAMFSSPE----LG--- 291
Query 185 LARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANAAIGA 244
LA I+ P + +P I YT+ ++QYD + V YD + + PDRP NL A N+ GA
Sbjct 292 LANIYLPNG-MTVPLINYTVQGLPNTQYDVSVVYGQYDFWGNPPDRPWNLPAAVNSLFGA 350
Query 245 AIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYLGMSDAEVDQI 304
A H D + +T S G TTY++P LP+ LPL+ +G+ VD +
Sbjct 351 AYYHNTASLASLSDA--VQVSSTTTSLGGAITTYMIPAPTLPMLLPLKDIGVPQPIVDTL 408
Query 305 DSVLQPQIDAAYA 317
+SVLQP ++ Y+
Sbjct 409 NSVLQPIVNDGYS 421
>gi|118470771|ref|YP_890365.1| PE family protein [Mycobacterium smegmatis str. MC2 155]
gi|118172058|gb|ABK72954.1| pe family protein [Mycobacterium smegmatis str. MC2 155]
Length=483
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 105/195 (54%), Gaps = 15/195 (7%)
Query 132 TDPAAAVGLSQGSLVLDQEQARLA--NDPTAPAPDKLQFTTFGDPTGRHAFGASFLARIF 189
T+ G SQG++V+ E+ RL ++ P D+L+F T GDPTG + + R
Sbjct 93 TEKIIVAGFSQGAIVIAYEKKRLMKLDEDERPTVDQLKFVTIGDPTGPNG-----ILRWI 147
Query 190 PPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANAAIGAAIAHT 249
P IP I T + D+ Y+T + YDG++DFPDRP NL+A ANA +G H
Sbjct 148 P----FRIPIIGLTPVRPPDTPYETTIINGEYDGWADFPDRPWNLIATANALLGIIYVHG 203
Query 250 PIGFTGPG----DVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYLGMSDAEVDQID 305
G VP +NI TVN G TTTYL+P LPL PLR LG ++ V ++
Sbjct 204 RYEDKVDGWDLSTVPEKNIVETVNKAGGKTTTYLIPTEKLPLLQPLRDLGFPESFVAALE 263
Query 306 SVLQPQIDAAYARND 320
+ L+ IDAAY RND
Sbjct 264 APLRKIIDAAYKRND 278
>gi|315445463|ref|YP_004078342.1| PE-PPE domain-containing protein [Mycobacterium sp. Spyr1]
gi|315263766|gb|ADU00508.1| PE-PPE domain-containing protein [Mycobacterium sp. Spyr1]
Length=423
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/230 (34%), Positives = 109/230 (48%), Gaps = 26/230 (11%)
Query 97 WPTMLLPPGSHQDNMTVGVAVKDGTNSLDNAIH------HGTDPAAAVGLSQGSLVLDQE 150
WP P + + ++T+G ++ G +L+ I + VGLS GSLV+++
Sbjct 65 WPAQA-GPMTGKGDLTLGASIAQGATNLNAQIDAALAQLKSGEKVTVVGLSAGSLVVNEI 123
Query 151 QARLANDPTAPAPDKLQFTTFGDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDS 210
L AP DK+ F D + + ++R + ++YT ++
Sbjct 124 LRELDESADAPGKDKITFVVVADSSRQK-----VISRTRYNAN------LDYTYQTAPET 172
Query 211 QYDTNHVVTAYDGFSDFPDRPDNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNS 270
+YD V YDG +DFPDR NLLA+ NA G H P+ + VP +NI VNS
Sbjct 173 KYDIIVVTGEYDGMADFPDRL-NLLAIVNAVAGGIFVHIPVMYADLSKVPARNISVEVNS 231
Query 271 RGATTTTYLVPVNHLPLTLPLRYLGMSDAEVDQIDSVLQPQIDAAYARND 320
G TTT YLVP LPL L +AE L+ +IDAAY+RND
Sbjct 232 EGGTTTHYLVPAEKLPLVRLFPSLANREAE-------LKAKIDAAYSRND 274
>gi|118468902|ref|YP_889594.1| PPE family protein [Mycobacterium smegmatis str. MC2 155]
gi|118170189|gb|ABK71085.1| PPE family protein, putative [Mycobacterium smegmatis str. MC2
155]
Length=473
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/216 (38%), Positives = 109/216 (51%), Gaps = 12/216 (5%)
Query 108 QDNMTVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQ 167
QD + A+ DG A+ +G S GS+V + LA P P D ++
Sbjct 77 QDALNSDKALLDGVQQTMIAVQQTDGKIVIIGESMGSMVAARVAKELAASPN-PRLDDVR 135
Query 168 FTTFGDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDF 227
P +A F G+ IPI + Y + + S Y T V+ YDG++D
Sbjct 136 VVLIAPP-------EVGVAEYFKEGTFIPI--LNYRVKRVALSPYPTTIVIGEYDGWADP 186
Query 228 PDRPDNLLAVANAAIGAAIAH-TPIGFTGPGDVPPQNIRTT-VNSRGATTTTYLVPVNHL 285
PDRP NLLA ANA +G H P T P DVPP+N++T N+ TT LVP +L
Sbjct 187 PDRPWNLLATANALLGIVYVHGVPSFTTDPNDVPPENVKTIPGNADHGPITTMLVPTKNL 246
Query 286 PLTLPLRYLGMSDAEVDQIDSVLQPQIDAAYARNDN 321
PLT LR +G+ D VD ID++L+P ID+AY RND
Sbjct 247 PLTQFLRDIGVPDQWVDAIDNILRPIIDSAYVRNDK 282
>gi|183984907|ref|YP_001853198.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178233|gb|ACC43343.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=463
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/274 (33%), Positives = 131/274 (48%), Gaps = 26/274 (9%)
Query 56 LGGARMPGIPW---------YEYTNQA-GSQYFPNAKHDLIDYPAGAAFSWWPTMLLPPG 105
LG A + GIP Y+ N A G +FP+ +I+YPA + L P
Sbjct 165 LGQALLLGIPGPSSASILQGYDLINHAIGENWFPDTIASVINYPA--SIGILSGSLAAPD 222
Query 106 SHQDNMTVGVAVKDGTNSLDNAIHHGTD-PAAAVGLSQGSLVLDQEQARLANDPTAPAPD 164
+ N V + + + +A+ +G+ P LSQG++V ++E A LA DP AP
Sbjct 223 T---NTAVAIGARMLHEQIMSAVTNGSGLPVHVATLSQGTIVANRELAYLATDPNAPPAH 279
Query 165 KLQFTTFGDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGF 224
L+F FG P G LA I+ P + +P I YT+ ++QYD + V YD +
Sbjct 280 ALEFALFGSPE----LG---LAHIYLPDG-LTVPLINYTVHGLSNTQYDVSVVNGQYDFW 331
Query 225 SDFPDRPDNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNH 284
+ PDRP NL A N+ GAA H F D + + S G T TTYL+P
Sbjct 332 GNPPDRPWNLPAWVNSLFGAAYYHNTSSFASLSDA--VEVSSVTTSLGGTITTYLIPSPT 389
Query 285 LPLTLPLRYLGMSDAEVDQIDSVLQPQIDAAYAR 318
LP+ LPL +G+ V ++SVL P ++ Y+
Sbjct 390 LPMLLPLEQIGVPAPIVAGLNSVLAPIVNDGYSS 423
>gi|145225096|ref|YP_001135774.1| hypothetical protein Mflv_4518 [Mycobacterium gilvum PYR-GCK]
gi|145217582|gb|ABP46986.1| PE-PPE, C-terminal domain protein [Mycobacterium gilvum PYR-GCK]
Length=423
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/230 (33%), Positives = 109/230 (48%), Gaps = 26/230 (11%)
Query 97 WPTMLLPPGSHQDNMTVGVAVKDGTNSLDNAIH------HGTDPAAAVGLSQGSLVLDQE 150
WP P + + ++T+G ++ G +L+ I + VGLS GSLV+++
Sbjct 65 WPAQA-GPMTGKGDLTLGASIAQGATNLNAQIDAALAQLKSGEKVTVVGLSAGSLVVNEI 123
Query 151 QARLANDPTAPAPDKLQFTTFGDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDS 210
L AP DK+ F D + + ++R + ++YT ++
Sbjct 124 LRELDESADAPGKDKITFVVVADSSRQK-----VISRTRYNAN------LDYTYQTAPET 172
Query 211 QYDTNHVVTAYDGFSDFPDRPDNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNS 270
+YD V YDG +DFPDR NLLA+ NA G H P+ + VP +NI +NS
Sbjct 173 KYDIIVVTGEYDGMADFPDRL-NLLAIVNAVAGGIFVHIPVMYADLSKVPARNISVEMNS 231
Query 271 RGATTTTYLVPVNHLPLTLPLRYLGMSDAEVDQIDSVLQPQIDAAYARND 320
G TTT YLVP LPL L +AE L+ +IDAAY+RND
Sbjct 232 EGGTTTHYLVPAEKLPLVRLFPSLANREAE-------LKAKIDAAYSRND 274
>gi|289572191|ref|ZP_06452418.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|339633537|ref|YP_004725179.1| PPE family protein [Mycobacterium africanum GM041182]
gi|289536622|gb|EFD41200.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|339332893|emb|CCC28620.1| PPE family protein [Mycobacterium africanum GM041182]
Length=479
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/280 (34%), Positives = 137/280 (49%), Gaps = 21/280 (7%)
Query 39 PSPSPVGDASTAKVVYALGGARMPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWP 98
P SPV A+ + L AR + E G+ +FP +++ YPA
Sbjct 205 PGASPVHAATLLPFIGRLLAAR-----YAELNTAIGTNWFPGTTPEVVSYPATIGV---- 255
Query 99 TMLLPPGSHQDNMTVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDP 158
+ G+ N ++ + + N + A G P GLS GS+V+D+E A LA DP
Sbjct 256 -LSGSLGAVDANQSIAIGQQMLHNEILAATASG-QPVTVAGLSMGSMVIDRELAYLAIDP 313
Query 159 TAPAPDKLQFTTFGDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVV 218
AP L F P ++L P G+ IPI YT+ +SQY+T+ V
Sbjct 314 NAPPSSALTFVELAGP--ERGLAQTYL----PVGTTIPIA--GYTVGNAPESQYNTSVVY 365
Query 219 TAYDGFSDFPDRPDNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTY 278
+ YD ++D PDRP NLLA ANA +GAA H + P I +S G TTT Y
Sbjct 366 SQYDIWADPPDRPWNLLAGANALMGAAYFHDLTAYAAPQQ--GIEIAAVTSSLGGTTTMY 423
Query 279 LVPVNHLPLTLPLRYLGMSDAEVDQIDSVLQPQIDAAYAR 318
++P LPL LPL+ +G+ D V +++VL+P +DA Y++
Sbjct 424 MIPSPTLPLLLPLKQIGVPDWIVGGLNNVLKPLVDAGYSQ 463
>gi|120402836|ref|YP_952665.1| hypothetical protein Mvan_1838 [Mycobacterium vanbaalenii PYR-1]
gi|119955654|gb|ABM12659.1| PE-PPE, C-terminal domain protein [Mycobacterium vanbaalenii
PYR-1]
Length=435
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/257 (33%), Positives = 120/257 (47%), Gaps = 42/257 (16%)
Query 78 FPNAKHDLIDYPAGAAFSWWPTMLLPPGSHQDNMTVGVAVKDGTNSLDNAI-----HHGT 132
N + +++PA AA P + +D++T+G ++ G +L+ I G
Sbjct 59 LKNQQRVSVNWPAEAA----------PWTGKDDLTLGASIDIGITNLNAQIDAALGRLGK 108
Query 133 D---------PAAAVGLSQGSLVLDQEQARLANDPTAPAPDKLQFTTFGDPTGRHAFGAS 183
D VGLS GSLV+++ +LA D AP D++ F D + + +
Sbjct 109 DANGNYVDGEKVTVVGLSAGSLVVNEVLRQLAADADAPDKDQITFIVVADSSRQKLINRT 168
Query 184 FLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVVTAYDGFSDFPDRPDNLLAVANAAIG 243
F +YT +++YD V YDG +DFPDR N LAVANA G
Sbjct 169 RYNSKF-----------DYTYQPAPETEYDIVVVTGEYDGLADFPDRWWNALAVANAIAG 217
Query 244 AAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTYLVPVNHLPLTLPLRYLGMSDAEVDQ 303
+ H P+ F VP +NI VNS+G TTT+YLVP LPL L +AE
Sbjct 218 SIYVHVPVMFADLSKVPAENITVDVNSKGGTTTSYLVPTAKLPLVQLFPSLAAKEAE--- 274
Query 304 IDSVLQPQIDAAYARND 320
L+ +ID AY+RND
Sbjct 275 ----LKAKIDKAYSRND 287
>gi|307086331|ref|ZP_07495444.1| PPE family protein [Mycobacterium tuberculosis SUMu012]
gi|308364217|gb|EFP53068.1| PPE family protein [Mycobacterium tuberculosis SUMu012]
gi|323717733|gb|EGB26931.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length=506
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/280 (34%), Positives = 138/280 (50%), Gaps = 21/280 (7%)
Query 39 PSPSPVGDASTAKVVYALGGARMPGIPWYEYTNQAGSQYFPNAKHDLIDYPAGAAFSWWP 98
P SPV A+ + L AR + E G+ +FP +++ YPA
Sbjct 232 PGASPVHAATLLPFIGRLLAAR-----YAELNTAIGTNWFPGTTPEVVSYPATIG----- 281
Query 99 TMLLPPGSHQDNMTVGVAVKDGTNSLDNAIHHGTDPAAAVGLSQGSLVLDQEQARLANDP 158
+ G+ N ++ + + N + A G P GLS GS+V+D+E A LA DP
Sbjct 282 VLSGSLGAVDANQSIAIGQQMLHNEILAATASG-QPVTVAGLSMGSMVIDRELAYLAIDP 340
Query 159 TAPAPDKLQFTTFGDPTGRHAFGASFLARIFPPGSHIPIPFIEYTMPQQVDSQYDTNHVV 218
AP L F P ++L P G+ IPI YT+ +SQY+T+ V
Sbjct 341 NAPPSSALTFVELAGP--ERGLAQTYL----PVGTTIPIA--GYTVGNAPESQYNTSVVY 392
Query 219 TAYDGFSDFPDRPDNLLAVANAAIGAAIAHTPIGFTGPGDVPPQNIRTTVNSRGATTTTY 278
+ YD ++D PDRP NLLA ANA +GAA H + P I +S G TTTTY
Sbjct 393 SQYDIWADPPDRPWNLLAGANALMGAAYFHDLTAYAAPQQ--GIEIAAVTSSLGGTTTTY 450
Query 279 LVPVNHLPLTLPLRYLGMSDAEVDQIDSVLQPQIDAAYAR 318
++P LPL LPL+ +G+ D V +++VL+P +DA Y++
Sbjct 451 MIPSPTLPLLLPLKQIGVPDWIVGGLNNVLKPLVDAGYSQ 490
Lambda K H
0.317 0.136 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 669804029900
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40