BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1195
Length=99
Score E
Sequences producing significant alignments: (Bits) Value
gi|167967999|ref|ZP_02550276.1| PE family protein [Mycobacterium... 179 9e-44
gi|148660982|ref|YP_001282505.1| PE family protein [Mycobacteriu... 179 1e-43
gi|15840639|ref|NP_335676.1| PE family protein [Mycobacterium tu... 179 2e-43
gi|31792388|ref|NP_854881.1| PE family protein [Mycobacterium bo... 179 2e-43
gi|148822410|ref|YP_001287164.1| PE family protein [Mycobacteriu... 178 2e-43
gi|289761340|ref|ZP_06520718.1| PE family protein [Mycobacterium... 177 3e-43
gi|254550201|ref|ZP_05140648.1| PE family protein [Mycobacterium... 172 2e-41
gi|294993379|ref|ZP_06799070.1| PE family protein [Mycobacterium... 160 6e-38
gi|15843089|ref|NP_338126.1| PE family protein [Mycobacterium tu... 119 1e-25
gi|31794651|ref|NP_857144.1| PE family protein [Mycobacterium bo... 118 3e-25
gi|183984754|ref|YP_001853045.1| PE-PGRS family protein [Mycobac... 113 8e-24
gi|240169038|ref|ZP_04747697.1| hypothetical protein MkanA1_0697... 113 1e-23
gi|342861310|ref|ZP_08717958.1| hypothetical protein MCOL_20601 ... 113 1e-23
gi|183982677|ref|YP_001850968.1| PE family protein, PE19_1 [Myco... 111 3e-23
gi|118618471|ref|YP_906803.1| PE family protein [Mycobacterium u... 110 1e-22
gi|333989643|ref|YP_004522257.1| PE-PGRS family protein [Mycobac... 109 1e-22
gi|342861305|ref|ZP_08717953.1| hypothetical protein MCOL_20576 ... 108 3e-22
gi|254775399|ref|ZP_05216915.1| hypothetical protein MaviaA2_121... 107 5e-22
gi|296164186|ref|ZP_06846786.1| PE family protein [Mycobacterium... 107 6e-22
gi|296164779|ref|ZP_06847341.1| PE family protein [Mycobacterium... 107 8e-22
gi|296170606|ref|ZP_06852185.1| PE family protein [Mycobacterium... 106 1e-21
gi|254820293|ref|ZP_05225294.1| hypothetical protein MintA_10211... 106 1e-21
gi|118616216|ref|YP_904548.1| PE-PGRS family protein family prot... 105 2e-21
gi|41407605|ref|NP_960441.1| hypothetical protein MAP1507 [Mycob... 103 9e-21
gi|183982680|ref|YP_001850971.1| PE family protein, PE19 [Mycoba... 102 3e-20
gi|183985086|ref|YP_001853377.1| PE family protein, PE32 [Mycoba... 100 9e-20
gi|118618467|ref|YP_906799.1| PE family protein [Mycobacterium u... 99.8 1e-19
gi|183981962|ref|YP_001850253.1| PE family protein [Mycobacteriu... 99.4 2e-19
gi|296165761|ref|ZP_06848275.1| PE family protein [Mycobacterium... 99.4 2e-19
gi|240170799|ref|ZP_04749458.1| PE-PGRS family protein [Mycobact... 99.0 2e-19
gi|240173524|ref|ZP_04752182.1| PE family protein, PE19_1 [Mycob... 99.0 2e-19
gi|15841256|ref|NP_336293.1| PE family protein [Mycobacterium tu... 99.0 2e-19
gi|333990542|ref|YP_004523156.1| PE-PGRS family protein [Mycobac... 99.0 2e-19
gi|118619370|ref|YP_907702.1| PE family protein [Mycobacterium u... 98.6 3e-19
gi|333989636|ref|YP_004522250.1| PE family protein PE8 [Mycobact... 97.4 6e-19
gi|254364620|ref|ZP_04980666.1| PE family protein [Mycobacterium... 96.7 1e-18
gi|15841261|ref|NP_336298.1| PE family protein [Mycobacterium tu... 96.7 1e-18
gi|333992874|ref|YP_004525488.1| PE-PGRS family protein [Mycobac... 96.3 1e-18
gi|31792979|ref|NP_855472.1| PE family protein [Mycobacterium bo... 96.3 1e-18
gi|333991171|ref|YP_004523785.1| PE-PGRS family protein [Mycobac... 96.3 1e-18
gi|240172420|ref|ZP_04751079.1| PE family protein, PE19_1 [Mycob... 95.1 3e-18
gi|118619579|ref|YP_907911.1| PE family protein [Mycobacterium u... 93.6 8e-18
gi|240172899|ref|ZP_04751558.1| PE family protein [Mycobacterium... 93.6 9e-18
gi|240172414|ref|ZP_04751073.1| PE family protein, PE19_1 [Mycob... 93.2 1e-17
gi|15843234|ref|NP_338271.1| PE family protein [Mycobacterium tu... 92.8 1e-17
gi|240173303|ref|ZP_04751961.1| PE family protein [Mycobacterium... 92.0 3e-17
gi|333989806|ref|YP_004522420.1| PE family protein PE19 [Mycobac... 91.7 3e-17
gi|254365420|ref|ZP_04981465.1| PE family protein [Mycobacterium... 91.3 4e-17
gi|167968541|ref|ZP_02550818.1| PE family protein [Mycobacterium... 91.3 5e-17
gi|333990534|ref|YP_004523148.1| PE-PGRS family protein [Mycobac... 90.9 5e-17
>gi|167967999|ref|ZP_02550276.1| PE family protein [Mycobacterium tuberculosis H37Ra]
Length=101
Score = 179 bits (455), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 99/99 (100%), Positives = 99/99 (100%), Gaps = 0/99 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA
Sbjct 3 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 62
Query 61 MYQSVSARAAAIHDQFVATLASSASSYAATEVANAAAAS 99
MYQSVSARAAAIHDQFVATLASSASSYAATEVANAAAAS
Sbjct 63 MYQSVSARAAAIHDQFVATLASSASSYAATEVANAAAAS 101
>gi|148660982|ref|YP_001282505.1| PE family protein [Mycobacterium tuberculosis H37Ra]
gi|148505134|gb|ABQ72943.1| PE family protein [Mycobacterium tuberculosis H37Ra]
Length=115
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/99 (100%), Positives = 99/99 (100%), Gaps = 0/99 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA
Sbjct 17 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 76
Query 61 MYQSVSARAAAIHDQFVATLASSASSYAATEVANAAAAS 99
MYQSVSARAAAIHDQFVATLASSASSYAATEVANAAAAS
Sbjct 77 MYQSVSARAAAIHDQFVATLASSASSYAATEVANAAAAS 115
>gi|15840639|ref|NP_335676.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|253799762|ref|YP_003032763.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
gi|289555017|ref|ZP_06444227.1| PE family protein [Mycobacterium tuberculosis KZN 605]
6 more sequence titles
Length=111
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/99 (100%), Positives = 99/99 (100%), Gaps = 0/99 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA
Sbjct 13 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 72
Query 61 MYQSVSARAAAIHDQFVATLASSASSYAATEVANAAAAS 99
MYQSVSARAAAIHDQFVATLASSASSYAATEVANAAAAS
Sbjct 73 MYQSVSARAAAIHDQFVATLASSASSYAATEVANAAAAS 111
>gi|31792388|ref|NP_854881.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57116840|ref|YP_177794.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|121637124|ref|YP_977347.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
55 more sequence titles
Length=99
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/99 (99%), Positives = 99/99 (100%), Gaps = 0/99 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA
Sbjct 1 MSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSYAATEVANAAAAS 99
MYQSVSARAAAIHDQFVATLASSASSYAATEVANAAAAS
Sbjct 61 MYQSVSARAAAIHDQFVATLASSASSYAATEVANAAAAS 99
>gi|148822410|ref|YP_001287164.1| PE family protein [Mycobacterium tuberculosis F11]
gi|254231459|ref|ZP_04924786.1| PE family protein [Mycobacterium tuberculosis C]
gi|254364096|ref|ZP_04980142.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|124600518|gb|EAY59528.1| PE family protein [Mycobacterium tuberculosis C]
gi|134149610|gb|EBA41655.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|148720937|gb|ABR05562.1| PE family protein [Mycobacterium tuberculosis F11]
Length=109
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/99 (100%), Positives = 99/99 (100%), Gaps = 0/99 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA
Sbjct 11 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 70
Query 61 MYQSVSARAAAIHDQFVATLASSASSYAATEVANAAAAS 99
MYQSVSARAAAIHDQFVATLASSASSYAATEVANAAAAS
Sbjct 71 MYQSVSARAAAIHDQFVATLASSASSYAATEVANAAAAS 109
>gi|289761340|ref|ZP_06520718.1| PE family protein [Mycobacterium tuberculosis GM 1503]
gi|289708846|gb|EFD72862.1| PE family protein [Mycobacterium tuberculosis GM 1503]
Length=128
Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA
Sbjct 13 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 72
Query 61 MYQSVSARAAAIHDQFVATLASSASSYAATEVANAAA 97
MYQSVSARAAAIHDQFVATLASSASSYAATEVANAAA
Sbjct 73 MYQSVSARAAAIHDQFVATLASSASSYAATEVANAAA 109
>gi|254550201|ref|ZP_05140648.1| PE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|313658059|ref|ZP_07814939.1| PE family protein [Mycobacterium tuberculosis KZN V2475]
Length=95
Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/95 (100%), Positives = 95/95 (100%), Gaps = 0/95 (0%)
Query 5 MAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAAMYQS 64
MAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAAMYQS
Sbjct 1 MAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAAMYQS 60
Query 65 VSARAAAIHDQFVATLASSASSYAATEVANAAAAS 99
VSARAAAIHDQFVATLASSASSYAATEVANAAAAS
Sbjct 61 VSARAAAIHDQFVATLASSASSYAATEVANAAAAS 95
>gi|294993379|ref|ZP_06799070.1| PE family protein [Mycobacterium tuberculosis 210]
gi|297730728|ref|ZP_06959846.1| PE family protein [Mycobacterium tuberculosis KZN R506]
Length=90
Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/90 (100%), Positives = 90/90 (100%), Gaps = 0/90 (0%)
Query 10 MLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAAMYQSVSARA 69
MLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAAMYQSVSARA
Sbjct 1 MLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAAMYQSVSARA 60
Query 70 AAIHDQFVATLASSASSYAATEVANAAAAS 99
AAIHDQFVATLASSASSYAATEVANAAAAS
Sbjct 61 AAIHDQFVATLASSASSYAATEVANAAAAS 90
>gi|15843089|ref|NP_338126.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|57117110|ref|YP_177975.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|121639395|ref|YP_979619.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
75 more sequence titles
Length=98
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/95 (72%), Positives = 75/95 (79%), Gaps = 1/95 (1%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SF A PEMLAAAA L+S+GAT ASNAAAA PTTGVVPPAADEVS L A F HAA
Sbjct 1 MSFT-AQPEMLAAAAGELRSLGATLKASNAAAAVPTTGVVPPAADEVSLLLATQFRTHAA 59
Query 61 MYQSVSARAAAIHDQFVATLASSASSYAATEVANA 95
YQ+ SA+AA IH+QFV TLA+SASSYA TE ANA
Sbjct 60 TYQTASAKAAVIHEQFVTTLATSASSYADTEAANA 94
>gi|31794651|ref|NP_857144.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|31620248|emb|CAD95691.1| PE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=98
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/90 (73%), Positives = 71/90 (79%), Gaps = 0/90 (0%)
Query 6 AYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAAMYQSV 65
A PEMLAAAA L+S+GAT SNAAAA PTTGVVPPAADEVS L A F HAA YQ+
Sbjct 5 AQPEMLAAAAGELRSLGATLKVSNAAAAVPTTGVVPPAADEVSLLLATQFRTHAATYQTA 64
Query 66 SARAAAIHDQFVATLASSASSYAATEVANA 95
SA+AA IH+QFV TLA+SASSYA TE ANA
Sbjct 65 SAKAAVIHEQFVTTLATSASSYADTEAANA 94
>gi|183984754|ref|YP_001853045.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178080|gb|ACC43190.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=99
Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/98 (67%), Positives = 74/98 (76%), Gaps = 0/98 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
++FV + PE L AAA L S+GA A NAAA AP TGVVP AADEVSALTAAHFAAH A
Sbjct 1 MAFVTSAPEALTAAALNLHSVGAGMSAGNAAAMAPITGVVPAAADEVSALTAAHFAAHGA 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSYAATEVANAAAA 98
MYQ++SA+A AIH+ FV TL +S SYA TE ANA AA
Sbjct 61 MYQTLSAQAQAIHEMFVTTLQASGGSYAETEAANAIAA 98
>gi|240169038|ref|ZP_04747697.1| hypothetical protein MkanA1_06979 [Mycobacterium kansasii ATCC
12478]
Length=99
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/87 (72%), Positives = 71/87 (82%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SF+ A P++LAAAA L S+GA A N+AAAAPTTGV+PPAADEVSAL A FAAHAA
Sbjct 1 MSFLTAQPDVLAAAAANLGSVGAALSAGNSAAAAPTTGVLPPAADEVSALVAVQFAAHAA 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
YQ+VSARAA IHDQ VATLA+SA SY
Sbjct 61 TYQAVSARAAGIHDQLVATLAASAGSY 87
>gi|342861310|ref|ZP_08717958.1| hypothetical protein MCOL_20601 [Mycobacterium colombiense CECT
3035]
gi|342131210|gb|EGT84491.1| hypothetical protein MCOL_20601 [Mycobacterium colombiense CECT
3035]
Length=99
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/91 (72%), Positives = 74/91 (82%), Gaps = 0/91 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFV PE LAAAA LQ+IG+T A NAAAAAPTTGVVP AADEVSALTAA FAAH
Sbjct 1 MSFVTTQPEALAAAAGNLQTIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHGQ 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSYAATE 91
MYQ+VSA+AAAIH+ FV TL++S+ SYA TE
Sbjct 61 MYQAVSAQAAAIHEMFVNTLSTSSGSYAVTE 91
>gi|183982677|ref|YP_001850968.1| PE family protein, PE19_1 [Mycobacterium marinum M]
gi|183176003|gb|ACC41113.1| PE family protein, PE19_1 [Mycobacterium marinum M]
Length=99
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/87 (71%), Positives = 70/87 (81%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+S+V PE LAAAA TLQ IG+T + NAAAAAPTTGVVP AADEVSALTAA FAAHA
Sbjct 1 MSYVTTQPEALAAAASTLQGIGSTLSSQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
MYQ+VSA+A+AIH+ FV TL S+ SY
Sbjct 61 MYQAVSAQASAIHEMFVNTLGISSGSY 87
>gi|118618471|ref|YP_906803.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|118570581|gb|ABL05332.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=99
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/87 (69%), Positives = 69/87 (80%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+S+V PE LAAAA TLQ IG+T + NAAAAAPTTGVVP AADEVSALTAA F AHA
Sbjct 1 MSYVTTQPEALAAAASTLQGIGSTLSSQNAAAAAPTTGVVPAAADEVSALTAAQFVAHAQ 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
MYQ+VSA+A+AIH+ FV TL S+ SY
Sbjct 61 MYQAVSAQASAIHEMFVNTLGISSGSY 87
>gi|333989643|ref|YP_004522257.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
gi|333485611|gb|AEF35003.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
Length=99
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/87 (71%), Positives = 69/87 (80%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFV PE LAAAA LQ+IG+ A NAAA+APTTGVVP AADEVSALTAA FA HA
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSALNAQNAAASAPTTGVVPAAADEVSALTAAQFATHAT 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
+YQSV+A+AAAIH+ FVATL SA SY
Sbjct 61 LYQSVAAQAAAIHEMFVATLNGSAESY 87
>gi|342861305|ref|ZP_08717953.1| hypothetical protein MCOL_20576 [Mycobacterium colombiense CECT
3035]
gi|342131205|gb|EGT84486.1| hypothetical protein MCOL_20576 [Mycobacterium colombiense CECT
3035]
Length=99
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/87 (73%), Positives = 72/87 (83%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFV PE LAAAA LQ+IG+T A NAAAAAPTTGVVP AADEVSALTAA FAAHA
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
MYQ+VSA+AAAIH+ FV TL++S+ SY
Sbjct 61 MYQAVSAQAAAIHEMFVNTLSTSSGSY 87
>gi|254775399|ref|ZP_05216915.1| hypothetical protein MaviaA2_12121 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|212595819|gb|ACJ35525.1| PE7 [Mycobacterium avium subsp. avium]
gi|336457654|gb|EGO36658.1| PE family protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=99
Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/87 (73%), Positives = 72/87 (83%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFV PE LAAAA LQ+IG+T A NAAAAAPTTGVVP AADEVSALTAA FAAHA
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
MYQ+VSA+AAAIH+ FV TL++S+ SY
Sbjct 61 MYQAVSAQAAAIHEAFVNTLSTSSGSY 87
>gi|296164186|ref|ZP_06846786.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295900461|gb|EFG79867.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=99
Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/84 (72%), Positives = 65/84 (78%), Gaps = 0/84 (0%)
Query 8 PEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAAMYQSVSA 67
P+ML AAA TLQ IG+ A NA AAAPTTGVVP AADEVSALTA FAAHA MYQ+VSA
Sbjct 8 PQMLTAAAGTLQGIGSAMSAENAPAAAPTTGVVPAAADEVSALTALQFAAHAQMYQAVSA 67
Query 68 RAAAIHDQFVATLASSASSYAATE 91
+AAAIH+ F TL SA SYA TE
Sbjct 68 QAAAIHEMFANTLGVSADSYAVTE 91
>gi|296164779|ref|ZP_06847341.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899880|gb|EFG79324.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=99
Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/91 (72%), Positives = 74/91 (82%), Gaps = 0/91 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFV PE L+AAA +LQSIG+ A NAAAAAPTTGVVP AADEVSALTAA FAAHA
Sbjct 1 MSFVTTQPEALSAAAGSLQSIGSALNAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSYAATE 91
MYQ+VSA+AAAIH+ FV TL+ S+ SYA TE
Sbjct 61 MYQAVSAQAAAIHEMFVNTLSMSSGSYAVTE 91
>gi|296170606|ref|ZP_06852185.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894738|gb|EFG74468.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=99
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/87 (73%), Positives = 71/87 (82%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFV PE LAAAA LQ+IG+T A NAAAAAPTTGVVP AADEVSALTAA FAAHA
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
MYQ+VSA+AAAIH+ FV TL+ S+ SY
Sbjct 61 MYQAVSAQAAAIHEAFVNTLSMSSGSY 87
>gi|254820293|ref|ZP_05225294.1| hypothetical protein MintA_10211 [Mycobacterium intracellulare
ATCC 13950]
gi|212596298|gb|ACJ35567.1| PE7 [Mycobacterium intracellulare ATCC 13950]
Length=99
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/87 (72%), Positives = 71/87 (82%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFV PE LAAAA LQ+IG+T A NAAAAAPTTGVVP AADEVSALTAA FAAHA
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
MYQ+VSA+A AIH+ FV TL++S+ SY
Sbjct 61 MYQAVSAQAQAIHEAFVNTLSTSSGSY 87
>gi|118616216|ref|YP_904548.1| PE-PGRS family protein family protein [Mycobacterium ulcerans
Agy99]
gi|118568326|gb|ABL03077.1| PE-PGRS family protein family protein [Mycobacterium ulcerans
Agy99]
Length=99
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/91 (68%), Positives = 68/91 (75%), Gaps = 0/91 (0%)
Query 8 PEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAAMYQSVSA 67
PE L AAA L S+GA T A NAAA AP TGVVP AADEVSALTAAHFAAH AM Q++SA
Sbjct 8 PEALTAAALNLHSVGAGTSAGNAAAMAPITGVVPAAADEVSALTAAHFAAHGAMCQTLSA 67
Query 68 RAAAIHDQFVATLASSASSYAATEVANAAAA 98
+A AI++ FV TL + SYA TE ANA AA
Sbjct 68 QAQAIYEMFVTTLQACGGSYAETEAANAVAA 98
>gi|41407605|ref|NP_960441.1| hypothetical protein MAP1507 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395958|gb|AAS03824.1| PE_4 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|225698451|gb|ACO07343.1| PE protein [Mycobacterium avium subsp. paratuberculosis]
Length=99
Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/87 (72%), Positives = 71/87 (82%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFV PE LAAAA LQ+IG T A NAAAAAPTTGVVP AADEVSALTAA FAA+A
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGWTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAYAQ 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
MYQ+VSA+AAAIH+ FV TL++S+ SY
Sbjct 61 MYQAVSAQAAAIHEAFVNTLSTSSVSY 87
>gi|183982680|ref|YP_001850971.1| PE family protein, PE19 [Mycobacterium marinum M]
gi|183176006|gb|ACC41116.1| PE family protein, PE19 [Mycobacterium marinum M]
Length=99
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/87 (74%), Positives = 70/87 (81%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFV PE LAAAA LQ IG T A NAAAAAPTTGVVP AADEVSALTAA FAAHA
Sbjct 1 MSFVTTQPEALAAAAANLQGIGTTMSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
MYQ+VSA+AAAIH+ FV TLA+S+ SY
Sbjct 61 MYQAVSAQAAAIHEMFVNTLATSSGSY 87
>gi|183985086|ref|YP_001853377.1| PE family protein, PE32 [Mycobacterium marinum M]
gi|183178412|gb|ACC43522.1| PE family protein, PE32 [Mycobacterium marinum M]
Length=99
Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/99 (59%), Positives = 69/99 (70%), Gaps = 0/99 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+S V A PE++A A LQ+I + A + A APTTGVVPPAAD VS LTAA FAAHA
Sbjct 1 MSHVTAQPEIVAGVALELQAINSAARAGDEVAVAPTTGVVPPAADLVSMLTAAQFAAHAR 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSYAATEVANAAAAS 99
+YQ++SA+AAA+ DQ V L SA SYAATE AN A S
Sbjct 61 VYQAISAQAAAVQDQLVTVLGISAGSYAATEAANTVAVS 99
>gi|118618467|ref|YP_906799.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|118570577|gb|ABL05328.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=99
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/87 (72%), Positives = 68/87 (79%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFV PE LAAAA LQ IG T A NAAAAAPTTGVVP AADEVSALTAA FA HA
Sbjct 1 MSFVTTQPEALAAAAANLQGIGTTMSAQNAAAAAPTTGVVPAAADEVSALTAAQFAGHAQ 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
MYQ+VSA+AA IH+ FV TLA+S+ SY
Sbjct 61 MYQAVSAQAAVIHEMFVNTLATSSGSY 87
>gi|183981962|ref|YP_001850253.1| PE family protein [Mycobacterium marinum M]
gi|183175288|gb|ACC40398.1| PE family protein [Mycobacterium marinum M]
Length=267
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/99 (59%), Positives = 71/99 (72%), Gaps = 1/99 (1%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTT-GVVPPAADEVSALTAAHFAAHA 59
+SF+ PE LAAAA L++IGAT A N AA APTT GV+P AADEVSAL A+ F A+
Sbjct 1 MSFLTTQPEELAAAAGKLETIGATMDAENVAAVAPTTTGVIPAAADEVSALQASLFTAYG 60
Query 60 AMYQSVSARAAAIHDQFVATLASSASSYAATEVANAAAA 98
+YQ VSA AA ++D FV TL SA +YAA E AN++AA
Sbjct 61 TLYQQVSAEAATLYDMFVRTLGVSAGTYAAAETANSSAA 99
>gi|296165761|ref|ZP_06848275.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898886|gb|EFG78378.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=99
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/99 (65%), Positives = 73/99 (74%), Gaps = 0/99 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFV A PEMLAA A+ L+ IG+ NAAA+ TTGV+P ADEVSALTA FAAHA
Sbjct 1 MSFVTAQPEMLAATANDLRGIGSALAVQNAAASRSTTGVIPAGADEVSALTAVQFAAHAQ 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSYAATEVANAAAAS 99
MYQ+VSA+AAA +D FV TLA SA SYAATE N AAS
Sbjct 61 MYQAVSAQAAAAYDLFVRTLAVSAGSYAATEAINTIAAS 99
>gi|240170799|ref|ZP_04749458.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478]
Length=99
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/87 (68%), Positives = 68/87 (79%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFV + PE L +AA LQSIG+ ASNAAA AP TGVVP AADEVSALTAAHFAAH
Sbjct 1 MSFVTSEPEALISAAGNLQSIGSAMNASNAAAIAPITGVVPAAADEVSALTAAHFAAHGT 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
+YQ+VSA+AAAIH+ FV TL +S SY
Sbjct 61 LYQAVSAQAAAIHELFVTTLGASGGSY 87
>gi|240173524|ref|ZP_04752182.1| PE family protein, PE19_1 [Mycobacterium kansasii ATCC 12478]
Length=99
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/87 (74%), Positives = 71/87 (82%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFV PE LAAAA +LQ IG T A NAAAAAPTTGVVP AADEVSALTAA FAAHA
Sbjct 1 MSFVTTQPEALAAAASSLQGIGTTMSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
MYQ+VSA+AAAIH+ FV TLA+S+ SY
Sbjct 61 MYQAVSAQAAAIHEMFVNTLATSSGSY 87
>gi|15841256|ref|NP_336293.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|31792976|ref|NP_855469.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57116910|ref|YP_177834.1| PE family protein [Mycobacterium tuberculosis H37Rv]
60 more sequence titles
Length=99
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/87 (69%), Positives = 68/87 (79%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFV PE LAAAA +LQ IG+ A NAAAA PTTGVVP AADEVSALTAA FAAHA
Sbjct 1 MSFVTTQPEALAAAAGSLQGIGSALNAQNAAAATPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
+YQ+VSA+AAAIH+ FV TL S+ SY
Sbjct 61 IYQAVSAQAAAIHEMFVNTLQMSSGSY 87
>gi|333990542|ref|YP_004523156.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
gi|333486510|gb|AEF35902.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
Length=99
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/87 (71%), Positives = 68/87 (79%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFV PE L AAA L +IG+ A NAAAA PTTGVVP AADEVSALTAA FAAHA+
Sbjct 1 MSFVNTQPEALTAAAGNLAAIGSALSAQNAAAATPTTGVVPAAADEVSALTAAQFAAHAS 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
MYQS+SA+A AIH FVATL SSA+SY
Sbjct 61 MYQSISAQAEAIHQAFVATLNSSANSY 87
>gi|118619370|ref|YP_907702.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|118571480|gb|ABL06231.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=99
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/99 (58%), Positives = 69/99 (70%), Gaps = 0/99 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+S V A PE++A A LQ+I + A + A APTTGVVPPAAD VS LTAA FAAHA
Sbjct 1 MSHVTAQPEIVAGVALELQAINSAARAGDEVAVAPTTGVVPPAADLVSMLTAAQFAAHAR 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSYAATEVANAAAAS 99
+YQ++SA+AAA+ D+ V L SA SYAATE AN A S
Sbjct 61 VYQAISAQAAAVQDELVTVLGISAGSYAATEAANTVAVS 99
>gi|333989636|ref|YP_004522250.1| PE family protein PE8 [Mycobacterium sp. JDM601]
gi|333485604|gb|AEF34996.1| PE family protein PE8 [Mycobacterium sp. JDM601]
Length=273
Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/91 (57%), Positives = 64/91 (71%), Gaps = 0/91 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFV +PE +AA A LQ+IG+ A N AAAAPTTG+ P ADEVS L A FAA+
Sbjct 1 MSFVTTHPEAMAATASNLQAIGSAMTAQNTAAAAPTTGIAPAGADEVSVLQATQFAAYGQ 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSYAATE 91
+YQ +SA+AAAI + FV TL +SA SY +TE
Sbjct 61 LYQQISAQAAAIQEMFVNTLRTSADSYGSTE 91
>gi|254364620|ref|ZP_04980666.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|134150134|gb|EBA42179.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
Length=99
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/85 (70%), Positives = 66/85 (78%), Gaps = 0/85 (0%)
Query 3 FVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAAMY 62
FV PE LAAAA +LQ IG+ A NAAAA PTTGVVP AADEVSALTAA FAAHA +Y
Sbjct 3 FVTTQPEALAAAAGSLQGIGSALNAQNAAAATPTTGVVPAAADEVSALTAAQFAAHAQIY 62
Query 63 QSVSARAAAIHDQFVATLASSASSY 87
Q+VSA+AAAIH+ FV TL S+ SY
Sbjct 63 QAVSAQAAAIHEMFVNTLQMSSGSY 87
>gi|15841261|ref|NP_336298.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|148823006|ref|YP_001287760.1| PE family protein [Mycobacterium tuberculosis F11]
gi|253799168|ref|YP_003032169.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
17 more sequence titles
Length=105
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/87 (73%), Positives = 69/87 (80%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFV PE LAAAA LQ IG T A NAAAAAPTTGVVP AADEVSALTAA FAAHA
Sbjct 7 MSFVTTQPEALAAAAANLQGIGTTMNAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 66
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
MYQ+VSA+AAAIH+ FV TL +S+ SY
Sbjct 67 MYQTVSAQAAAIHEMFVNTLVASSGSY 93
>gi|333992874|ref|YP_004525488.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
gi|333488842|gb|AEF38234.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
Length=95
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/90 (64%), Positives = 64/90 (72%), Gaps = 0/90 (0%)
Query 6 AYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAAMYQSV 65
A PE L A A L SIG A N AAA PTTGVVP AADEVSALTAA FA HA MYQ++
Sbjct 3 ALPEELTATAAELSSIGNAVAAQNTAAAGPTTGVVPAAADEVSALTAAQFARHAQMYQAI 62
Query 66 SARAAAIHDQFVATLASSASSYAATEVANA 95
S RAA +H++FV L +A SYAAT+ ANA
Sbjct 63 SKRAAVVHERFVIMLQRNAQSYAATDAANA 92
>gi|31792979|ref|NP_855472.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57116913|ref|YP_177837.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|121637692|ref|YP_977915.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
59 more sequence titles
Length=99
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/87 (73%), Positives = 69/87 (80%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFV PE LAAAA LQ IG T A NAAAAAPTTGVVP AADEVSALTAA FAAHA
Sbjct 1 MSFVTTQPEALAAAAANLQGIGTTMNAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
MYQ+VSA+AAAIH+ FV TL +S+ SY
Sbjct 61 MYQTVSAQAAAIHEMFVNTLVASSGSY 87
>gi|333991171|ref|YP_004523785.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
gi|333487139|gb|AEF36531.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
Length=99
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/87 (60%), Positives = 61/87 (71%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SF+ A PE L AAAD L S G + N AA PTTGV+PPAADE+SA+ AA F A
Sbjct 1 MSFLTADPEALRAAADCLSSTGGALASQNTAAQVPTTGVLPPAADEISAMLAARFTTQAQ 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
YQ VSA+AAAIH+ FVATL SAS+Y
Sbjct 61 HYQQVSAQAAAIHEMFVATLNGSASTY 87
>gi|240172420|ref|ZP_04751079.1| PE family protein, PE19_1 [Mycobacterium kansasii ATCC 12478]
Length=99
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/94 (56%), Positives = 66/94 (71%), Gaps = 0/94 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+S + PEML +AA LQ++G++ ++ NAAAAA T V+PPA DEVSALTA HFAAHA
Sbjct 1 MSILTTEPEMLQSAATKLQTLGSSMISRNAAAAAATMNVIPPAGDEVSALTAMHFAAHAK 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSYAATEVAN 94
+Q+V RA AIH+ FVATLA+ SY E N
Sbjct 61 AFQAVYTRAIAIHEAFVATLAACGDSYTVVEATN 94
>gi|118619579|ref|YP_907911.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|183984578|ref|YP_001852869.1| PE family protein [Mycobacterium marinum M]
gi|118571689|gb|ABL06440.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|183177904|gb|ACC43014.1| PE family protein [Mycobacterium marinum M]
Length=99
Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/87 (64%), Positives = 67/87 (78%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFV+ PE LAAAA +LQ +G+ A +AAA APTT V P AAD+VSALTAA F+AHA
Sbjct 1 MSFVVTQPERLAAAAGSLQEVGSAVSAQSAAAVAPTTSVAPAAADQVSALTAARFSAHAQ 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
+YQ VSA+A AIHD+FVA LA+ A SY
Sbjct 61 LYQMVSAQAVAIHDRFVAALAAGAQSY 87
>gi|240172899|ref|ZP_04751558.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=99
Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/87 (63%), Positives = 65/87 (75%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
++FV+ PE LAAAA LQ IG+ A N AA+A TT V P AAD+VSALTAA F+AHA
Sbjct 1 MTFVVTQPETLAAAAGNLQEIGSAVSAQNVAASAHTTSVTPAAADQVSALTAARFSAHAQ 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
+YQ VSA+AAAIH FVA L +SA+SY
Sbjct 61 VYQVVSAQAAAIHQAFVAALTASANSY 87
>gi|240172414|ref|ZP_04751073.1| PE family protein, PE19_1 [Mycobacterium kansasii ATCC 12478]
Length=281
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/95 (55%), Positives = 66/95 (70%), Gaps = 0/95 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFV+ PEML AA L++IG+ +N AA P GV+P AADEVS +TAA F A+
Sbjct 1 MSFVITLPEMLMAAVGRLEAIGSAVSTANVTAALPIAGVIPAAADEVSMVTAASFTAYGQ 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSYAATEVANA 95
+YQ++SA A IH+QFV L SA+SYAATE ANA
Sbjct 61 LYQAISAEAHLIHEQFVKALGLSANSYAATEAANA 95
>gi|15843234|ref|NP_338271.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|57117136|ref|YP_177999.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|148663485|ref|YP_001285008.1| PE family protein [Mycobacterium tuberculosis H37Ra]
67 more sequence titles
Length=99
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/87 (60%), Positives = 60/87 (69%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+S + A PEMLAA A LQSI A A NAA A PTTGVVP AAD VS LTA+ FAAHA
Sbjct 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
+YQ++SA A A+ +Q TL SA SY
Sbjct 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
>gi|240173303|ref|ZP_04751961.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=146
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/87 (56%), Positives = 62/87 (72%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SF+ P+ LAAAA LQ+IGAT A N AAA PTTGV+P AADEVS L A+ F A+ +
Sbjct 1 MSFLTTQPDELAAAAGKLQTIGATMEAENVAAAVPTTGVIPAAADEVSMLQASMFTAYGS 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
+YQ +SA AAA+++ V TL SA +Y
Sbjct 61 LYQQISAEAAAMYEMLVNTLGVSAGTY 87
>gi|333989806|ref|YP_004522420.1| PE family protein PE19 [Mycobacterium sp. JDM601]
gi|333485774|gb|AEF35166.1| PE family protein PE19 [Mycobacterium sp. JDM601]
Length=99
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/87 (63%), Positives = 63/87 (73%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFV PE LA+AA L+ IG+ A N AAA PTT + P AADEVSALTAA F+AHA
Sbjct 1 MSFVNTQPEALASAASELRGIGSVVAAQNMAAAGPTTVLPPAAADEVSALTAALFSAHAQ 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
YQ VSA+AAAIH+ FV TLA S+ SY
Sbjct 61 AYQEVSAQAAAIHEAFVRTLALSSESY 87
>gi|254365420|ref|ZP_04981465.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|134150933|gb|EBA42978.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
Length=275
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/99 (60%), Positives = 73/99 (74%), Gaps = 1/99 (1%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTT-GVVPPAADEVSALTAAHFAAHA 59
+SF+ PE LAAAA L++IG+ VA NAAAAAPTT GV+P AADE+S L A F A+
Sbjct 1 MSFLTTQPEELAAAAGKLETIGSAMVAQNAAAAAPTTTGVIPAAADEISVLQAPLFTAYG 60
Query 60 AMYQSVSARAAAIHDQFVATLASSASSYAATEVANAAAA 98
+YQ VSA AAA++D FV TL SA +YAATE AN++AA
Sbjct 61 TLYQQVSAEAAAVYDLFVKTLGVSAGTYAATEAANSSAA 99
>gi|167968541|ref|ZP_02550818.1| PE family protein [Mycobacterium tuberculosis H37Ra]
Length=96
Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/82 (63%), Positives = 57/82 (70%), Gaps = 0/82 (0%)
Query 6 AYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAAMYQSV 65
A PEMLAA A LQSI A A NAA A PTTGVVP AAD VS LTA+ FAAHA +YQ++
Sbjct 3 AEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQLYQAI 62
Query 66 SARAAAIHDQFVATLASSASSY 87
SA A A+ +Q TL SA SY
Sbjct 63 SAEAMAVQEQLATTLGISAGSY 84
>gi|333990534|ref|YP_004523148.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
gi|333486502|gb|AEF35894.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
Length=99
Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/87 (73%), Positives = 70/87 (81%), Gaps = 0/87 (0%)
Query 1 VSFVMAYPEMLAAAADTLQSIGATTVASNAAAAAPTTGVVPPAADEVSALTAAHFAAHAA 60
+SFV PE LAAAA +L IG+ A NAAAAAPTTGVVP AADEVSALTAA FAAHA
Sbjct 1 MSFVNTQPEALAAAAGSLSGIGSALNAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAT 60
Query 61 MYQSVSARAAAIHDQFVATLASSASSY 87
MYQ VSA+AAAIH+ FVATL +SA+SY
Sbjct 61 MYQQVSAQAAAIHEMFVATLNNSATSY 87
Lambda K H
0.311 0.112 0.288
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129711308684
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40