BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1205
Length=187
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608345|ref|NP_215721.1| hypothetical protein Rv1205 [Mycoba... 375 2e-102
gi|339294193|gb|AEJ46304.1| hypothetical protein CCDC5079_1114 [... 350 5e-95
gi|289757302|ref|ZP_06516680.1| conserved hypothetical protein [... 328 2e-88
gi|118616717|ref|YP_905049.1| hypothetical protein MUL_0956 [Myc... 297 6e-79
gi|183984205|ref|YP_001852496.1| hypothetical protein MMAR_4233 ... 292 2e-77
gi|340708314|pdb|3SBX|A Chain A, Crystal Structure Of A Putative... 289 1e-76
gi|342862090|ref|ZP_08718733.1| hypothetical protein MCOL_24486 ... 263 8e-69
gi|118468584|ref|YP_889337.1| hypothetical protein MSMEG_5087 [M... 263 8e-69
gi|325534095|pdb|3QUA|A Chain A, Crystal Structure Of A Putative... 263 9e-69
gi|240169016|ref|ZP_04747675.1| hypothetical protein MkanA1_0686... 261 4e-68
gi|108800972|ref|YP_641169.1| hypothetical protein Mmcs_4008 [My... 255 2e-66
gi|254822034|ref|ZP_05227035.1| hypothetical protein MintA_19022... 254 6e-66
gi|296170110|ref|ZP_06851709.1| possible lysine decarboxylase [M... 252 2e-65
gi|15827517|ref|NP_301780.1| hypothetical protein ML1061 [Mycoba... 251 4e-65
gi|120405463|ref|YP_955292.1| hypothetical protein Mvan_4511 [My... 251 5e-65
gi|41408670|ref|NP_961506.1| hypothetical protein MAP2572c [Myco... 240 7e-62
gi|333989820|ref|YP_004522434.1| hypothetical protein JDM601_118... 240 8e-62
gi|315443239|ref|YP_004076118.1| hypothetical protein Mspyr1_161... 235 3e-60
gi|312138865|ref|YP_004006201.1| lysine decarboxylase [Rhodococc... 227 7e-58
gi|229493863|ref|ZP_04387636.1| conserved hypothetical protein [... 226 2e-57
gi|145222772|ref|YP_001133450.1| hypothetical protein Mflv_2184 ... 225 2e-57
gi|226307656|ref|YP_002767616.1| hypothetical protein RER_41690 ... 225 2e-57
gi|169628434|ref|YP_001702083.1| hypothetical protein MAB_1341 [... 215 2e-54
gi|333921015|ref|YP_004494596.1| Decarboxylase [Amycolicicoccus ... 214 3e-54
gi|54026713|ref|YP_120955.1| hypothetical protein nfa47390 [Noca... 207 5e-52
gi|226365435|ref|YP_002783218.1| hypothetical protein ROP_60260 ... 207 6e-52
gi|111022929|ref|YP_705901.1| hypothetical protein RHA1_ro05966 ... 197 4e-49
gi|343926929|ref|ZP_08766422.1| hypothetical protein GOALK_072_0... 195 3e-48
gi|296138889|ref|YP_003646132.1| hypothetical protein Tpau_1162 ... 192 2e-47
gi|134097617|ref|YP_001103278.1| hypothetical protein SACE_1021 ... 189 2e-46
gi|331694881|ref|YP_004331120.1| hypothetical protein Psed_1016 ... 188 3e-46
gi|325002592|ref|ZP_08123704.1| hypothetical protein PseP1_27687... 184 4e-45
gi|183981578|ref|YP_001849869.1| hypothetical protein MMAR_1562 ... 181 3e-44
gi|256374923|ref|YP_003098583.1| hypothetical protein Amir_0775 ... 181 4e-44
gi|326381458|ref|ZP_08203152.1| hypothetical protein SCNU_00865 ... 179 2e-43
gi|262203202|ref|YP_003274410.1| hypothetical protein Gbro_3313 ... 169 2e-40
gi|86742519|ref|YP_482919.1| hypothetical protein Francci3_3840 ... 167 1e-39
gi|302869752|ref|YP_003838389.1| hypothetical protein Micau_5307... 164 6e-39
gi|312194603|ref|YP_004014664.1| hypothetical protein FraEuI1c_0... 161 5e-38
gi|296270982|ref|YP_003653614.1| hypothetical protein Tbis_3024 ... 160 1e-37
gi|111225443|ref|YP_716237.1| putative lysine decarboxylase [Fra... 154 7e-36
gi|296283332|ref|ZP_06861330.1| decarboxylase family protein [Ci... 152 2e-35
gi|238060937|ref|ZP_04605646.1| hypothetical protein MCAG_01903 ... 152 3e-35
gi|341613641|ref|ZP_08700510.1| decarboxylase family protein [Ci... 151 5e-35
gi|319950855|ref|ZP_08024739.1| lysine decarboxylase [Dietzia ci... 150 7e-35
gi|330469986|ref|YP_004407729.1| hypothetical protein VAB18032_0... 150 8e-35
gi|271969618|ref|YP_003343814.1| hypothetical protein Sros_8427 ... 148 4e-34
gi|288922604|ref|ZP_06416782.1| conserved hypothetical protein [... 147 5e-34
gi|269125425|ref|YP_003298795.1| hypothetical protein Tcur_1174 ... 147 7e-34
gi|168703174|ref|ZP_02735451.1| hypothetical protein GobsU_26826... 147 9e-34
>gi|15608345|ref|NP_215721.1| hypothetical protein Rv1205 [Mycobacterium tuberculosis H37Rv]
gi|15840649|ref|NP_335686.1| hypothetical protein MT1243 [Mycobacterium tuberculosis CDC1551]
gi|31792398|ref|NP_854891.1| hypothetical protein Mb1237 [Mycobacterium bovis AF2122/97]
75 more sequence titles
Length=187
Score = 375 bits (962), Expect = 2e-102, Method: Compositional matrix adjust.
Identities = 187/187 (100%), Positives = 187/187 (100%), Gaps = 0/187 (0%)
Query 1 MSAKIDITGDWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASA 60
MSAKIDITGDWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASA
Sbjct 1 MSAKIDITGDWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASA 60
Query 61 ARACGGWTVGVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLD 120
ARACGGWTVGVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLD
Sbjct 61 ARACGGWTVGVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLD 120
Query 121 ELFDAWTDGYLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDA 180
ELFDAWTDGYLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDA
Sbjct 121 ELFDAWTDGYLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDA 180
Query 181 LRACAPS 187
LRACAPS
Sbjct 181 LRACAPS 187
>gi|339294193|gb|AEJ46304.1| hypothetical protein CCDC5079_1114 [Mycobacterium tuberculosis
CCDC5079]
gi|339297833|gb|AEJ49943.1| hypothetical protein CCDC5180_1106 [Mycobacterium tuberculosis
CCDC5180]
Length=175
Score = 350 bits (898), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 174/175 (99%), Positives = 175/175 (100%), Gaps = 0/175 (0%)
Query 13 VAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVGVI 72
+AVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVGVI
Sbjct 1 MAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVGVI 60
Query 73 PKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGYLG 132
PKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGYLG
Sbjct 61 PKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGYLG 120
Query 133 THDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACAPS 187
THDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACAPS
Sbjct 121 THDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACAPS 175
>gi|289757302|ref|ZP_06516680.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289712866|gb|EFD76878.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length=178
Score = 328 bits (842), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 164/166 (99%), Positives = 164/166 (99%), Gaps = 0/166 (0%)
Query 22 THAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVGVIPKMLVYREL 81
THAELLELAAEVGA IA RGWTLVWGGGHVSAMGAVASAARACGGWTVGVIPKMLVYREL
Sbjct 13 THAELLELAAEVGAPIAERGWTLVWGGGHVSAMGAVASAARACGGWTVGVIPKMLVYREL 72
Query 82 ADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGYLGTHDKPIVMV 141
ADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGYLGTHDKPIVMV
Sbjct 73 ADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGYLGTHDKPIVMV 132
Query 142 DPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACAPS 187
DPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACAPS
Sbjct 133 DPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACAPS 178
>gi|118616717|ref|YP_905049.1| hypothetical protein MUL_0956 [Mycobacterium ulcerans Agy99]
gi|118568827|gb|ABL03578.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=187
Score = 297 bits (760), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 153/186 (83%), Positives = 169/186 (91%), Gaps = 0/186 (0%)
Query 1 MSAKIDITGDWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASA 60
M+AK D G WTVAVYCAA+PTH ELLELAA VGAAIA RGWTLVWGGGHVSAMGAV+SA
Sbjct 1 MTAKSDEPGRWTVAVYCAAAPTHPELLELAAAVGAAIAARGWTLVWGGGHVSAMGAVSSA 60
Query 61 ARACGGWTVGVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLD 120
ARA GGWTVGVIPKMLV+RELADHDADEL+VT+TMWERKQ+MEDR++AFI LPGGVGTLD
Sbjct 61 ARAHGGWTVGVIPKMLVHRELADHDADELVVTETMWERKQVMEDRANAFITLPGGVGTLD 120
Query 121 ELFDAWTDGYLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDA 180
EL D WT+GYLG HDK IV++DPWGHFDGLRAWL+ L DTGYVS TAMERL+VVDN+ DA
Sbjct 121 ELLDVWTEGYLGMHDKSIVVLDPWGHFDGLRAWLSELADTGYVSRTAMERLIVVDNLDDA 180
Query 181 LRACAP 186
L+ACAP
Sbjct 181 LQACAP 186
>gi|183984205|ref|YP_001852496.1| hypothetical protein MMAR_4233 [Mycobacterium marinum M]
gi|183177531|gb|ACC42641.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=187
Score = 292 bits (747), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/186 (82%), Positives = 168/186 (91%), Gaps = 0/186 (0%)
Query 1 MSAKIDITGDWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASA 60
M+AK D G WTVAVYCAA+PTH ELLELA VGAAIA RGWTLVWGGGHVSAMGAV+SA
Sbjct 1 MTAKSDEPGRWTVAVYCAAAPTHPELLELAGAVGAAIAARGWTLVWGGGHVSAMGAVSSA 60
Query 61 ARACGGWTVGVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLD 120
ARA GGWTVGVIPKMLV+RELADHDADEL+VT+TMWERKQ+MEDR++AFI LPGGVGTLD
Sbjct 61 ARAHGGWTVGVIPKMLVHRELADHDADELVVTETMWERKQVMEDRANAFITLPGGVGTLD 120
Query 121 ELFDAWTDGYLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDA 180
EL D WT+GYLG HDK IV++DPWGHFDGLRAWL+ L DTGYVS TAMERL+VVDN+ DA
Sbjct 121 ELLDVWTEGYLGMHDKSIVVLDPWGHFDGLRAWLSELADTGYVSRTAMERLIVVDNLDDA 180
Query 181 LRACAP 186
L+ACAP
Sbjct 181 LQACAP 186
>gi|340708314|pdb|3SBX|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Marinum Bound To Adenosine 5'-Monophosphate
Amp
gi|340708315|pdb|3SBX|B Chain B, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Marinum Bound To Adenosine 5'-Monophosphate
Amp
gi|340708316|pdb|3SBX|C Chain C, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Marinum Bound To Adenosine 5'-Monophosphate
Amp
gi|340708317|pdb|3SBX|D Chain D, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Marinum Bound To Adenosine 5'-Monophosphate
Amp
gi|340708318|pdb|3SBX|E Chain E, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Marinum Bound To Adenosine 5'-Monophosphate
Amp
gi|340708319|pdb|3SBX|F Chain F, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Marinum Bound To Adenosine 5'-Monophosphate
Amp
gi|340708320|pdb|3SBX|G Chain G, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Marinum Bound To Adenosine 5'-Monophosphate
Amp
gi|340708321|pdb|3SBX|H Chain H, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Marinum Bound To Adenosine 5'-Monophosphate
Amp
Length=189
Score = 289 bits (740), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/185 (82%), Positives = 167/185 (91%), Gaps = 0/185 (0%)
Query 2 SAKIDITGDWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAA 61
+AK D G WTVAVYCAA+PTH ELLELA VGAAIA RGWTLVWGGGHVSAMGAV+SAA
Sbjct 5 TAKSDEPGRWTVAVYCAAAPTHPELLELAGAVGAAIAARGWTLVWGGGHVSAMGAVSSAA 64
Query 62 RACGGWTVGVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDE 121
RA GGWTVGVIPKMLV+RELADHDADEL+VT+TMWERKQ+MEDR++AFI LPGGVGTLDE
Sbjct 65 RAHGGWTVGVIPKMLVHRELADHDADELVVTETMWERKQVMEDRANAFITLPGGVGTLDE 124
Query 122 LFDAWTDGYLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDAL 181
L D WT+GYLG HDK IV++DPWGHFDGLRAWL+ L DTGYVS TAMERL+VVDN+ DAL
Sbjct 125 LLDVWTEGYLGMHDKSIVVLDPWGHFDGLRAWLSELADTGYVSRTAMERLIVVDNLDDAL 184
Query 182 RACAP 186
+ACAP
Sbjct 185 QACAP 189
>gi|342862090|ref|ZP_08718733.1| hypothetical protein MCOL_24486 [Mycobacterium colombiense CECT
3035]
gi|342130394|gb|EGT83709.1| hypothetical protein MCOL_24486 [Mycobacterium colombiense CECT
3035]
Length=187
Score = 263 bits (672), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 131/187 (71%), Positives = 155/187 (83%), Gaps = 0/187 (0%)
Query 1 MSAKIDITGDWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASA 60
M + D + W+V VYCA+ P H ELL +AAE+G AIA RGWTLVWGGG VSAMGAVASA
Sbjct 1 MPDRRDSSSGWSVCVYCASGPEHPELLGVAAELGEAIAERGWTLVWGGGRVSAMGAVASA 60
Query 61 ARACGGWTVGVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLD 120
ARA GG TVGVIPK+L+ RE+AD DADELIV+DTM ERKQ+MEDR+DAF+VLPGG+GTLD
Sbjct 61 ARARGGRTVGVIPKILMRREIADADADELIVSDTMHERKQLMEDRADAFVVLPGGLGTLD 120
Query 121 ELFDAWTDGYLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDA 180
EL DAWT +LG HDKPIV++DP+GH++GL WL GLLD+GYVS AM+RLV+VD V A
Sbjct 121 ELLDAWTTAFLGLHDKPIVLLDPFGHYEGLWTWLCGLLDSGYVSQVAMDRLVLVDKVSAA 180
Query 181 LRACAPS 187
L ACAP+
Sbjct 181 LEACAPA 187
>gi|118468584|ref|YP_889337.1| hypothetical protein MSMEG_5087 [Mycobacterium smegmatis str.
MC2 155]
gi|118169871|gb|ABK70767.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=194
Score = 263 bits (672), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 130/178 (74%), Positives = 148/178 (84%), Gaps = 0/178 (0%)
Query 10 DWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTV 69
W V VYCA+ PTH ELLELAAEVG++IA RGWTLV GGG+VSAMGAVA AARA GG TV
Sbjct 17 QWAVCVYCASGPTHPELLELAAEVGSSIAARGWTLVSGGGNVSAMGAVAQAARAKGGHTV 76
Query 70 GVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDG 129
GVIPK LV+RELAD DA ELIVTDTM ERK+ ME RSDAFI LPGG+GTL+E F+AWT G
Sbjct 77 GVIPKALVHRELADVDAAELIVTDTMRERKREMEHRSDAFIALPGGIGTLEEFFEAWTAG 136
Query 130 YLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACAPS 187
YLG HDKP++++DP+GH+DGL WL GL+ TGYVS AM+ LVVVDNV+ AL ACAP
Sbjct 137 YLGMHDKPLILLDPFGHYDGLLTWLRGLVPTGYVSQRAMDSLVVVDNVEAALEACAPE 194
>gi|325534095|pdb|3QUA|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein
And Possible Molybdenum Cofactor Protein From Mycobacterium
Smegmatis
gi|325534096|pdb|3QUA|B Chain B, Crystal Structure Of A Putative Uncharacterized Protein
And Possible Molybdenum Cofactor Protein From Mycobacterium
Smegmatis
Length=199
Score = 263 bits (672), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 130/178 (74%), Positives = 148/178 (84%), Gaps = 0/178 (0%)
Query 10 DWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTV 69
W V VYCA+ PTH ELLELAAEVG++IA RGWTLV GGG+VSAMGAVA AARA GG TV
Sbjct 22 QWAVCVYCASGPTHPELLELAAEVGSSIAARGWTLVSGGGNVSAMGAVAQAARAKGGHTV 81
Query 70 GVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDG 129
GVIPK LV+RELAD DA ELIVTDTM ERK+ ME RSDAFI LPGG+GTL+E F+AWT G
Sbjct 82 GVIPKALVHRELADVDAAELIVTDTMRERKREMEHRSDAFIALPGGIGTLEEFFEAWTAG 141
Query 130 YLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACAPS 187
YLG HDKP++++DP+GH+DGL WL GL+ TGYVS AM+ LVVVDNV+ AL ACAP
Sbjct 142 YLGMHDKPLILLDPFGHYDGLLTWLRGLVPTGYVSQRAMDSLVVVDNVEAALEACAPE 199
>gi|240169016|ref|ZP_04747675.1| hypothetical protein MkanA1_06869 [Mycobacterium kansasii ATCC
12478]
Length=189
Score = 261 bits (666), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/188 (71%), Positives = 153/188 (82%), Gaps = 2/188 (1%)
Query 1 MSAKIDIT-GDWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVAS 59
M ++D T +W V VYCAA PTH ELLELAAE+G AIA GWTLVWGGG++SAMGAVA
Sbjct 1 MCPRLDSTEHEWAVCVYCAAGPTHPELLELAAELGEAIADSGWTLVWGGGNLSAMGAVAG 60
Query 60 AARACGGWTVGVIPKMLVYRELADHDA-DELIVTDTMWERKQIMEDRSDAFIVLPGGVGT 118
AA A GG TVGVIPK+L+ REL+D DA +ELIVTDTM ERK IME+R++ FIVLPGG+GT
Sbjct 61 AAHARGGRTVGVIPKLLIRRELSDADAANELIVTDTMRERKHIMEERAEGFIVLPGGLGT 120
Query 119 LDELFDAWTDGYLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVK 178
LDEL DAWT GYLG H KPIV++DPWGH+DGL AWLNGL++TGYV+ AMERL VVD V
Sbjct 121 LDELLDAWTTGYLGMHRKPIVILDPWGHYDGLLAWLNGLVNTGYVAQVAMERLTVVDKVS 180
Query 179 DALRACAP 186
AL CAP
Sbjct 181 AALELCAP 188
>gi|108800972|ref|YP_641169.1| hypothetical protein Mmcs_4008 [Mycobacterium sp. MCS]
gi|119870112|ref|YP_940064.1| hypothetical protein Mkms_4082 [Mycobacterium sp. KMS]
gi|126436809|ref|YP_001072500.1| hypothetical protein Mjls_4238 [Mycobacterium sp. JLS]
gi|108771391|gb|ABG10113.1| conserved hypothetical protein 730 [Mycobacterium sp. MCS]
gi|119696201|gb|ABL93274.1| conserved hypothetical protein 730 [Mycobacterium sp. KMS]
gi|126236609|gb|ABO00010.1| conserved hypothetical protein 730 [Mycobacterium sp. JLS]
Length=188
Score = 255 bits (652), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/176 (70%), Positives = 150/176 (86%), Gaps = 0/176 (0%)
Query 11 WTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVG 70
W V VYCA+SPT LL LAA VG AIA RGWTLV GGG+VSAMGA+A AARA GG TVG
Sbjct 11 WAVCVYCASSPTDERLLSLAARVGEAIADRGWTLVSGGGNVSAMGALAHAARAHGGRTVG 70
Query 71 VIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGY 130
VIPK LV+RE+AD DADEL+VTDTM ERKQ+MEDR+DAF+ LPGG+GTL+E F+AWT Y
Sbjct 71 VIPKALVHREVADVDADELVVTDTMRERKQVMEDRADAFLSLPGGIGTLEEFFEAWTAAY 130
Query 131 LGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACAP 186
LG HDKP+VM+DP GH++GL AWL+GL+D+GYV+ +A++RL+VVDN+ +A+ ACAP
Sbjct 131 LGMHDKPVVMLDPIGHYEGLLAWLHGLVDSGYVARSALDRLIVVDNIDEAMAACAP 186
>gi|254822034|ref|ZP_05227035.1| hypothetical protein MintA_19022 [Mycobacterium intracellulare
ATCC 13950]
Length=187
Score = 254 bits (648), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 129/186 (70%), Positives = 149/186 (81%), Gaps = 0/186 (0%)
Query 1 MSAKIDITGDWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASA 60
M + D +W V VYCA+ P H ELL +AAE+G AIA RGWTLVWGGG VSAMGAVASA
Sbjct 1 MPGERDSAREWAVCVYCASGPQHPELLGVAAELGEAIAERGWTLVWGGGRVSAMGAVASA 60
Query 61 ARACGGWTVGVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLD 120
ARA GG TVGVI ++L+ RE+AD DADELIV+DT+ ERKQIMEDR+DAFI LPGG+GTLD
Sbjct 61 ARARGGRTVGVIAQVLMRREIADADADELIVSDTLHERKQIMEDRADAFIALPGGIGTLD 120
Query 121 ELFDAWTDGYLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDA 180
EL D WT YLG HDKPIV++DP GH++GL WL GLLD+GYVS AM+RLV+VD V A
Sbjct 121 ELLDTWTTAYLGLHDKPIVLLDPVGHYEGLWTWLCGLLDSGYVSQVAMDRLVLVDKVGAA 180
Query 181 LRACAP 186
L ACAP
Sbjct 181 LDACAP 186
>gi|296170110|ref|ZP_06851709.1| possible lysine decarboxylase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895212|gb|EFG74925.1| possible lysine decarboxylase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=180
Score = 252 bits (644), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/177 (72%), Positives = 146/177 (83%), Gaps = 0/177 (0%)
Query 10 DWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTV 69
DW V VYCA+ P H ELL LAAE+G AIA RGWTLVWGGG VSAMGAVA+AARA GG TV
Sbjct 3 DWAVCVYCASGPEHPELLALAAELGEAIAERGWTLVWGGGRVSAMGAVATAARARGGRTV 62
Query 70 GVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDG 129
GVIP++L+ E+AD DADELIVT+TM ERK +ME R+DAFIVLPGGVGTLDEL D+WT G
Sbjct 63 GVIPQVLMRVEIADIDADELIVTETMHERKHVMEQRADAFIVLPGGVGTLDELLDSWTTG 122
Query 130 YLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACAP 186
YLG H KPIVM+DP GH++GL WL GLLD+GYVS AM+RL++VD V A+ ACAP
Sbjct 123 YLGLHRKPIVMLDPLGHYEGLWTWLCGLLDSGYVSQPAMDRLLLVDKVSAAVEACAP 179
>gi|15827517|ref|NP_301780.1| hypothetical protein ML1061 [Mycobacterium leprae TN]
gi|221229994|ref|YP_002503410.1| hypothetical protein MLBr_01061 [Mycobacterium leprae Br4923]
gi|699154|gb|AAA62920.1| ctf [Mycobacterium leprae]
gi|13093067|emb|CAC31442.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933101|emb|CAR71156.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=187
Score = 251 bits (641), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 126/174 (73%), Positives = 144/174 (83%), Gaps = 0/174 (0%)
Query 11 WTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVG 70
W + V+CAA P H ELLELAAE+G AIA RGWTLVWGGG VSAMGAVASAA GG VG
Sbjct 11 WAICVFCAAGPMHPELLELAAELGEAIAERGWTLVWGGGRVSAMGAVASAAWTRGGRIVG 70
Query 71 VIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGY 130
VIP+ML RE+AD ELIVT+TM ERKQ+++D +DAFIVLPGG+GTLDELF+AWT GY
Sbjct 71 VIPEMLQRREIADTYVGELIVTETMAERKQVLDDHADAFIVLPGGLGTLDELFEAWTAGY 130
Query 131 LGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRAC 184
LG H KPIVM+DPWGH++GL AWL+GL+D+GYVSP AMERLVVVD V AL AC
Sbjct 131 LGMHRKPIVMLDPWGHYEGLWAWLHGLIDSGYVSPVAMERLVVVDQVDAALEAC 184
>gi|120405463|ref|YP_955292.1| hypothetical protein Mvan_4511 [Mycobacterium vanbaalenii PYR-1]
gi|119958281|gb|ABM15286.1| conserved hypothetical protein 730 [Mycobacterium vanbaalenii
PYR-1]
Length=185
Score = 251 bits (640), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 124/177 (71%), Positives = 145/177 (82%), Gaps = 0/177 (0%)
Query 10 DWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTV 69
+W V VYCA+ P H ELLELA +VG IA RGWTLV GGG+VSAMG VA AAR+ GG+TV
Sbjct 8 EWAVCVYCASGPLHPELLELARKVGEGIAERGWTLVSGGGNVSAMGVVADAARSRGGYTV 67
Query 70 GVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDG 129
GVIPK LV+RE+AD +ADEL+VTDTM ERKQ+MEDR+DAFI LPGG+GTL+E F+AWT G
Sbjct 68 GVIPKRLVHREVADTEADELVVTDTMRERKQVMEDRADAFIALPGGIGTLEEFFEAWTAG 127
Query 130 YLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACAP 186
YLG H KPIVM+D GH+DGL AWL GL+ TGYV+ AM RL+VVD+V AL ACAP
Sbjct 128 YLGMHTKPIVMLDTLGHYDGLLAWLRGLVRTGYVAEDAMGRLIVVDDVDAALAACAP 184
>gi|41408670|ref|NP_961506.1| hypothetical protein MAP2572c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118463799|ref|YP_880594.1| hypothetical protein MAV_1350 [Mycobacterium avium 104]
gi|254774228|ref|ZP_05215744.1| hypothetical protein MaviaA2_06095 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41397028|gb|AAS04889.1| hypothetical protein MAP_2572c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118165086|gb|ABK65983.1| conserved hypothetical protein [Mycobacterium avium 104]
gi|336458624|gb|EGO37589.1| TIGR00730 family protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=187
Score = 240 bits (613), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 127/186 (69%), Positives = 152/186 (82%), Gaps = 0/186 (0%)
Query 1 MSAKIDITGDWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASA 60
M A+ D + W V VYCA+ P H ELL +AAE+G AIA RGWTLVWGGG VSAMGAVASA
Sbjct 1 MPAERDSSAAWAVCVYCASGPQHPELLGVAAELGEAIAERGWTLVWGGGRVSAMGAVASA 60
Query 61 ARACGGWTVGVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLD 120
ARA GG TVGVIP +L+ RE+AD DADELIV+DT+ ERKQIMEDR+DAFI LPGG+GTLD
Sbjct 61 ARARGGRTVGVIPTVLMRREIADADADELIVSDTLHERKQIMEDRADAFIALPGGIGTLD 120
Query 121 ELFDAWTDGYLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDA 180
E+ DAWT G+LG H KPIV++DP GH++GL WL+GLLD+GY++ AM+R+V+VD V A
Sbjct 121 EVLDAWTTGFLGLHAKPIVLLDPIGHYEGLWLWLSGLLDSGYITQAAMDRVVLVDKVGAA 180
Query 181 LRACAP 186
L ACAP
Sbjct 181 LEACAP 186
>gi|333989820|ref|YP_004522434.1| hypothetical protein JDM601_1180 [Mycobacterium sp. JDM601]
gi|333485788|gb|AEF35180.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=187
Score = 240 bits (612), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 117/177 (67%), Positives = 146/177 (83%), Gaps = 0/177 (0%)
Query 10 DWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTV 69
+W V VYCA+ PT LL LAA+VGAAIA RGWTLVWGGG++SAMGA+A A R GG TV
Sbjct 5 EWAVCVYCASGPTDPALLALAAKVGAAIAQRGWTLVWGGGNISAMGALAVAVRQHGGRTV 64
Query 70 GVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDG 129
GVIPK L++RE+AD ++DELIVTDTM ERKQ+M+ R+DAF+ LPGG+GTL+ELF+ WT
Sbjct 65 GVIPKALLHREVADVESDELIVTDTMRERKQVMDQRADAFLTLPGGIGTLEELFETWTGR 124
Query 130 YLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACAP 186
YLG HDKP+V++DP GH+ GL AW++GLLD G+VS AM+RL+VVD ++ AL ACAP
Sbjct 125 YLGLHDKPVVLLDPDGHYAGLWAWMSGLLDAGFVSQRAMDRLLVVDELETALDACAP 181
>gi|315443239|ref|YP_004076118.1| hypothetical protein Mspyr1_16160 [Mycobacterium sp. Spyr1]
gi|315261542|gb|ADT98283.1| conserved hypothetical protein, DprA/Smf-related, family 2 [Mycobacterium
sp. Spyr1]
Length=187
Score = 235 bits (599), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 122/177 (69%), Positives = 147/177 (84%), Gaps = 0/177 (0%)
Query 10 DWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTV 69
+W V VYCA+ P H EL++LA +VGA IA RGWTLV GGG+VSAMGAVA+AAR+ GG+TV
Sbjct 8 EWAVCVYCASGPVHPELMDLARKVGAGIADRGWTLVSGGGNVSAMGAVAAAARSHGGYTV 67
Query 70 GVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDG 129
GVIPK LV+RE+AD +ADEL+VTDTM ERKQ+MEDR+DAF+ LPGG+GTL+E F+AWT G
Sbjct 68 GVIPKALVHREVADTEADELVVTDTMRERKQVMEDRADAFLALPGGIGTLEEFFEAWTAG 127
Query 130 YLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACAP 186
YLG H KPIVM+D GH+DGL AWL GL+ TGYV+ AM L+VVD V +AL ACAP
Sbjct 128 YLGMHTKPIVMLDTVGHYDGLLAWLRGLVGTGYVAQDAMRSLIVVDGVDEALTACAP 184
>gi|312138865|ref|YP_004006201.1| lysine decarboxylase [Rhodococcus equi 103S]
gi|325676431|ref|ZP_08156109.1| decarboxylase [Rhodococcus equi ATCC 33707]
gi|311888204|emb|CBH47516.1| putative lysine decarboxylase [Rhodococcus equi 103S]
gi|325552609|gb|EGD22293.1| decarboxylase [Rhodococcus equi ATCC 33707]
Length=186
Score = 227 bits (578), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 111/177 (63%), Positives = 136/177 (77%), Gaps = 0/177 (0%)
Query 9 GDWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWT 68
G + V VYCA+ P + L LA+EVGAAI RGW LV GGG+VS MGAVA+AAR G WT
Sbjct 9 GKFAVCVYCASGPVDEKFLRLASEVGAAIGRRGWQLVSGGGNVSMMGAVATAAREAGAWT 68
Query 69 VGVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTD 128
VGVIPK LV++E+AD DADELIVTDTM ERK+IMEDR+DAF+ LPGG+GTL+ELF+ WT
Sbjct 69 VGVIPKALVHKEVADVDADELIVTDTMRERKKIMEDRADAFVTLPGGIGTLEELFETWTA 128
Query 129 GYLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACA 185
GYLG H+KP+VM+DP HF GL WL L G+V+ A++ L+V +V+ AL ACA
Sbjct 129 GYLGMHEKPVVMLDPVDHFRGLLEWLESLKPQGFVAQRALDGLIVTGDVETALDACA 185
>gi|229493863|ref|ZP_04387636.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229319250|gb|EEN85098.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=185
Score = 226 bits (575), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/182 (62%), Positives = 136/182 (75%), Gaps = 0/182 (0%)
Query 6 DITGDWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACG 65
D +++ VYCA+ P L LAAEVG AI RGW LV GGG+VS MGAVA +ARA G
Sbjct 4 DSDKKYSICVYCASGPVDESFLALAAEVGTAIGRRGWQLVSGGGNVSMMGAVAESARAAG 63
Query 66 GWTVGVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDA 125
WTVGVIPK LV++E+AD DADELIVTDTM ERK++MED +DAFI LPGG+GTL+ELF+
Sbjct 64 AWTVGVIPKALVHKEVADVDADELIVTDTMRERKKLMEDHADAFITLPGGIGTLEELFET 123
Query 126 WTDGYLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACA 185
WT GYLG H+KP+VM+DP GHF GL WLN L TG+V A++ L+V +V+ AL AC
Sbjct 124 WTAGYLGMHEKPVVMLDPVGHFTGLLEWLNKLDGTGFVGRQALDTLLVRTDVEAALDACV 183
Query 186 PS 187
S
Sbjct 184 KS 185
>gi|145222772|ref|YP_001133450.1| hypothetical protein Mflv_2184 [Mycobacterium gilvum PYR-GCK]
gi|145215258|gb|ABP44662.1| conserved hypothetical protein 730 [Mycobacterium gilvum PYR-GCK]
Length=187
Score = 225 bits (574), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/177 (71%), Positives = 148/177 (84%), Gaps = 0/177 (0%)
Query 10 DWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTV 69
+W V VYCA+ P H EL+ELA +VGA IA RGWTLV GGG+VSAMGAVA+AAR+ GG+TV
Sbjct 8 EWAVCVYCASGPVHPELMELARKVGAGIADRGWTLVSGGGNVSAMGAVAAAARSHGGYTV 67
Query 70 GVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDG 129
GVIPK LV+RE+AD +ADEL+VTDTM ERKQ+MEDR+DAF+ LPGG+GTL+E F+AWT G
Sbjct 68 GVIPKALVHREVADTEADELVVTDTMRERKQVMEDRADAFLALPGGIGTLEEFFEAWTAG 127
Query 130 YLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACAP 186
YLG H KPIVM+D GH+DGL AWL GL+ TGYV+ AM+ LVVVD+V AL ACAP
Sbjct 128 YLGMHTKPIVMLDTVGHYDGLLAWLRGLVGTGYVAQDAMDSLVVVDDVDAALTACAP 184
>gi|226307656|ref|YP_002767616.1| hypothetical protein RER_41690 [Rhodococcus erythropolis PR4]
gi|226186773|dbj|BAH34877.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=185
Score = 225 bits (573), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/182 (62%), Positives = 136/182 (75%), Gaps = 0/182 (0%)
Query 6 DITGDWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACG 65
D +++ VYCA+ P L LAAEVG AI RGW LV GGG+VS MGAVA +ARA G
Sbjct 4 DSDKKYSICVYCASGPVDESFLALAAEVGTAIGRRGWQLVSGGGNVSMMGAVAESARAAG 63
Query 66 GWTVGVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDA 125
WTVGVIPK LV++E+AD DADELIVTDTM ERK++MED +DAFI LPGG+GTL+ELF+
Sbjct 64 AWTVGVIPKALVHKEVADVDADELIVTDTMRERKKLMEDHADAFITLPGGIGTLEELFET 123
Query 126 WTDGYLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACA 185
WT GYLG H+KP+VM+DP GHF GL WLN L TG+V A++ L+V +V+ AL AC
Sbjct 124 WTAGYLGMHEKPVVMLDPVGHFTGLLEWLNKLDGTGFVGRQALDTLLVRTDVEAALDACV 183
Query 186 PS 187
S
Sbjct 184 RS 185
>gi|169628434|ref|YP_001702083.1| hypothetical protein MAB_1341 [Mycobacterium abscessus ATCC 19977]
gi|169240401|emb|CAM61429.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=182
Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/176 (66%), Positives = 140/176 (80%), Gaps = 0/176 (0%)
Query 12 TVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVGV 71
+V VYCA+ P H ELL+LA +G AIA RGWTLV GGG+VSAMGAVA AARA GG T+GV
Sbjct 6 SVCVYCASGPRHPELLDLATRLGTAIAERGWTLVSGGGNVSAMGAVAHAARAAGGRTIGV 65
Query 72 IPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGYL 131
IPK LV+RE+AD DADEL+VT TM ERKQIMEDRSDAFI LPGG+GTL+E+F+ WT GYL
Sbjct 66 IPKTLVHREVADTDADELVVTTTMRERKQIMEDRSDAFITLPGGIGTLEEVFETWTAGYL 125
Query 132 GTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACAPS 187
G HDKP+V++DP GH+ GL WL+ L D GYV+ A +RL+V ++ AL AC P+
Sbjct 126 GLHDKPVVLLDPDGHYTGLLRWLDELQDKGYVAAPARDRLLVHTDIAAALDACKPT 181
>gi|333921015|ref|YP_004494596.1| Decarboxylase [Amycolicicoccus subflavus DQS3-9A1]
gi|333483236|gb|AEF41796.1| Decarboxylase [Amycolicicoccus subflavus DQS3-9A1]
Length=189
Score = 214 bits (546), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/177 (59%), Positives = 134/177 (76%), Gaps = 0/177 (0%)
Query 9 GDWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWT 68
G VAVYCA+ P AE LELAAEVG AI RGW LV GGG++S MGAVA+AAR+ G WT
Sbjct 5 GQLMVAVYCASGPVPAEYLELAAEVGEAIGDRGWGLVSGGGNISMMGAVATAARSAGAWT 64
Query 69 VGVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTD 128
VGVIPK LV+RE+AD D+DELIVTDTM +RK+ ME+R+DAF+ LPGG+GTL+E +AWT
Sbjct 65 VGVIPKALVHREVADTDSDELIVTDTMRQRKKHMEERADAFLTLPGGIGTLEEFTEAWTA 124
Query 129 GYLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACA 185
GY+G H KP+V++DP HF G W+ L+ +G+VS +++R+ + +V AL CA
Sbjct 125 GYIGMHRKPLVVLDPMDHFAGFFDWIKSLVPSGFVSQHSLDRIQIATSVGAALDLCA 181
>gi|54026713|ref|YP_120955.1| hypothetical protein nfa47390 [Nocardia farcinica IFM 10152]
gi|54018221|dbj|BAD59591.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=190
Score = 207 bits (527), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/173 (61%), Positives = 131/173 (76%), Gaps = 0/173 (0%)
Query 11 WTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVG 70
+ V VYC+AS T E L+LAA VGA IA RGW LV GGG+VS MGAVA+AARA G TVG
Sbjct 6 FAVCVYCSASTTDPEQLDLAARVGAEIARRGWQLVSGGGNVSMMGAVATAARAGGANTVG 65
Query 71 VIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGY 130
VIPK LV++E+AD +ADELIVTDTM +RKQIMEDR+DAF+ LPGG+GTL+E F+ WT GY
Sbjct 66 VIPKHLVHKEVADVEADELIVTDTMRQRKQIMEDRADAFLTLPGGIGTLEEFFETWTGGY 125
Query 131 LGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRA 183
LG HDKP+V+++ G + GL WL+ L + V+P A +R+ V D++ A A
Sbjct 126 LGQHDKPVVVLNHDGFYTGLFRWLDELAERMLVAPAARKRITVADDLDSAFAA 178
>gi|226365435|ref|YP_002783218.1| hypothetical protein ROP_60260 [Rhodococcus opacus B4]
gi|226243925|dbj|BAH54273.1| hypothetical protein [Rhodococcus opacus B4]
Length=186
Score = 207 bits (527), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 109/184 (60%), Positives = 140/184 (77%), Gaps = 0/184 (0%)
Query 1 MSAKIDITGDWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASA 60
M++K + ++V VYCA+ P LELAA+VG I RGW LV GGG+VS MGAVA A
Sbjct 1 MTSKTVPSQPFSVCVYCASGPVDDHFLELAAQVGTEIGKRGWQLVSGGGNVSMMGAVAEA 60
Query 61 ARACGGWTVGVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLD 120
ARA G TVGVIPK LV+RE+AD DADEL+VTDTM +RKQ+MEDR+DAF+ LPGG+GTL+
Sbjct 61 ARAAGAITVGVIPKALVHREVADVDADELVVTDTMRQRKQVMEDRADAFVTLPGGIGTLE 120
Query 121 ELFDAWTDGYLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDA 180
ELF+ WT GYLG H+KP+V++DP GH+ GL W++GL G+V+ A++RL+V V +A
Sbjct 121 ELFETWTAGYLGMHEKPVVLLDPHGHYTGLLDWIDGLRGGGFVAQRALDRLLVRTGVGEA 180
Query 181 LRAC 184
L AC
Sbjct 181 LDAC 184
>gi|111022929|ref|YP_705901.1| hypothetical protein RHA1_ro05966 [Rhodococcus jostii RHA1]
gi|110822459|gb|ABG97743.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=186
Score = 197 bits (502), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 108/174 (63%), Positives = 135/174 (78%), Gaps = 0/174 (0%)
Query 11 WTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVG 70
++V VYCA+ P LELA+ VG I RGW LV GGG+VS MGAVA AARA G TVG
Sbjct 11 FSVCVYCASGPVDDHFLELASRVGTEIGKRGWQLVSGGGNVSMMGAVAEAARAAGATTVG 70
Query 71 VIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGY 130
VIPK LV+RE+AD DADEL+VTDTM +RKQIMEDR+DAF+ LPGG+GTL+ELF+ WT GY
Sbjct 71 VIPKALVHREVADVDADELVVTDTMRQRKQIMEDRADAFVTLPGGIGTLEELFETWTAGY 130
Query 131 LGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRAC 184
LG H+KP+V++DP GH+ GL WL+GL G+V+ A++RL+V +V +AL AC
Sbjct 131 LGMHEKPVVLLDPHGHYTGLLDWLDGLRGGGFVAQRALDRLLVRVDVGEALDAC 184
>gi|343926929|ref|ZP_08766422.1| hypothetical protein GOALK_072_01510 [Gordonia alkanivorans NBRC
16433]
gi|343763289|dbj|GAA13348.1| hypothetical protein GOALK_072_01510 [Gordonia alkanivorans NBRC
16433]
Length=178
Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/169 (54%), Positives = 128/169 (76%), Gaps = 0/169 (0%)
Query 13 VAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVGVI 72
V VYCA+ P L+LA+EVGAA+A G +V GGG+VS MGA+ ++ARA GG T+G+I
Sbjct 4 VCVYCASGPVEQRFLDLASEVGAALARAGHVVVSGGGNVSMMGALVTSARAAGGNTIGII 63
Query 73 PKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGYLG 132
PK L+ RE+AD +DEL++T+TM ERK+IM++R+D FI LPGG+GTL+ELF+ WT GYLG
Sbjct 64 PKALIEREVADLGSDELVITETMRERKRIMDERADGFITLPGGIGTLEELFETWTGGYLG 123
Query 133 THDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDAL 181
H+KP+V++DP+ + L WL L TG+VS +++RL+V +V +A+
Sbjct 124 MHEKPVVLLDPFDFYAPLLGWLRELSTTGFVSQRSLDRLLVTASVDEAI 172
>gi|296138889|ref|YP_003646132.1| hypothetical protein Tpau_1162 [Tsukamurella paurometabola DSM
20162]
gi|296027023|gb|ADG77793.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length=182
Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/172 (58%), Positives = 125/172 (73%), Gaps = 0/172 (0%)
Query 13 VAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVGVI 72
+AV+CA+ AE ++LA EVGAAIA G +LVWGGGHVS MGAVA +AR G T+GVI
Sbjct 4 IAVFCASRAVPAEYIQLAHEVGAAIAAGGDSLVWGGGHVSMMGAVAQSARDGGAHTLGVI 63
Query 73 PKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGYLG 132
P LV RE+ADHDADEL+V DTM ERKQ+M+D ++AF+VLPGGVGTL+E F+AWT GYL
Sbjct 64 PTALVDREVADHDADELLVVDTMRERKQLMDDNAEAFLVLPGGVGTLEEFFEAWTAGYLS 123
Query 133 THDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRAC 184
HDKP+V++D G + L W++ L G+V A+ +L V DAL AC
Sbjct 124 MHDKPVVILDHDGFYAPLLDWIDQLAARGFVGDAALGKLHRATGVTDALDAC 175
>gi|134097617|ref|YP_001103278.1| hypothetical protein SACE_1021 [Saccharopolyspora erythraea NRRL
2338]
gi|291010015|ref|ZP_06567988.1| hypothetical protein SeryN2_36330 [Saccharopolyspora erythraea
NRRL 2338]
gi|133910240|emb|CAM00353.1| hypothetical protein SACE_1021 [Saccharopolyspora erythraea NRRL
2338]
Length=183
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/174 (57%), Positives = 127/174 (73%), Gaps = 0/174 (0%)
Query 13 VAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVGVI 72
V VYCA+ P + L+LAA+VG IA RGW+LV GGG VS MG V AARA G TVGVI
Sbjct 10 VCVYCASRPVPQQYLDLAADVGTGIAKRGWSLVSGGGRVSMMGEVTRAARAGGARTVGVI 69
Query 73 PKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGYLG 132
P+ LV E+AD D+DEL+V DTM ERK +M+ + AF+ LPGG+GT +ELF+ WT YLG
Sbjct 70 PRALVDLEVADSDSDELLVVDTMRERKGLMDAHASAFMALPGGIGTCEELFEVWTSRYLG 129
Query 133 THDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACAP 186
H KP+V++DP GH+ GL WL G++D+G+ S +++E L VV +V+ AL ACAP
Sbjct 130 MHAKPVVLLDPDGHYRGLLDWLRGMVDSGFASSSSLEALSVVTDVEAALDACAP 183
>gi|331694881|ref|YP_004331120.1| hypothetical protein Psed_1016 [Pseudonocardia dioxanivorans
CB1190]
gi|326949570|gb|AEA23267.1| Conserved hypothetical protein CHP00730 [Pseudonocardia dioxanivorans
CB1190]
Length=195
Score = 188 bits (478), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/177 (56%), Positives = 127/177 (72%), Gaps = 1/177 (0%)
Query 11 WTVAVYCAASPTHAE-LLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTV 69
++V VYCA+S + + ++LA +VG AIA RGW LV GGG VS MGAVA+AARA G T+
Sbjct 10 FSVCVYCASSLSVPDRYVDLATQVGTAIAARGWDLVSGGGRVSMMGAVATAARAGGSRTI 69
Query 70 GVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDG 129
GVIP+ LV RE+AD ADEL+VTDTM ERK +ME + AF+ LPGG+GT +ELF+ WT
Sbjct 70 GVIPRSLVDREVADTAADELLVTDTMRERKALMEAHAGAFLALPGGIGTCEELFEVWTAA 129
Query 130 YLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACAP 186
LG HDKP+V++DP H+ GL WL L+ G+ A++RLVV +V AL ACAP
Sbjct 130 TLGMHDKPVVLLDPDDHWSGLLDWLAALVRRGFAGRAALDRLVVTADVSRALDACAP 186
>gi|325002592|ref|ZP_08123704.1| hypothetical protein PseP1_27687 [Pseudonocardia sp. P1]
Length=197
Score = 184 bits (468), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 101/186 (55%), Positives = 130/186 (70%), Gaps = 11/186 (5%)
Query 11 WTVAVYCAASPTHAE-LLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTV 69
++V VYCA+S AE L+LA VG +A RGWTLV GGG S MGAVA+ AR+ GG TV
Sbjct 8 FSVCVYCASSDGVAEHYLDLAGAVGRGVADRGWTLVSGGGRRSMMGAVAAGARSAGGRTV 67
Query 70 GVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDG 129
G+IPK +V E ADH++DEL++TD+M +RK+ ME+RSDAF+ LPGG+GT +ELF+ WT G
Sbjct 68 GIIPKSMVDWEWADHESDELVITDSMRDRKRQMEERSDAFLALPGGIGTCEELFEVWTSG 127
Query 130 YLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDN----------VKD 179
LG HDKP+V++DP GH+DGL W+ GL D G+ + M RL VV + V
Sbjct 128 VLGLHDKPVVVLDPDGHWDGLLDWVAGLQDRGFAARPPMGRLQVVRSDGAGPDGAALVGA 187
Query 180 ALRACA 185
AL ACA
Sbjct 188 ALDACA 193
>gi|183981578|ref|YP_001849869.1| hypothetical protein MMAR_1562 [Mycobacterium marinum M]
gi|183174904|gb|ACC40014.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=255
Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/179 (51%), Positives = 117/179 (66%), Gaps = 0/179 (0%)
Query 9 GDWTVAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWT 68
G T+ VYCA+ + L LAA VG I RGW L+ GGG ++ MGAVA AAR G T
Sbjct 56 GRPTICVYCASGGDNPADLSLAAAVGTEIGRRGWRLISGGGTIAMMGAVARAARTAGAHT 115
Query 69 VGVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTD 128
GVIP+ML+ ELAD ADELIVTDT+ +RK +M +R+D F+ LPGG+GTL+EL + WT
Sbjct 116 TGVIPRMLLQSELADLGADELIVTDTLTQRKHLMGERADGFLTLPGGLGTLEELLECWTA 175
Query 129 GYLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACAPS 187
LG H KP+V++DP GH+ GL WL L G+V A++RL+V +V A PS
Sbjct 176 ASLGIHHKPVVLLDPAGHYRGLLDWLEELRQQGFVRTAAIDRLIVTTDVDSAFSNLCPS 234
>gi|256374923|ref|YP_003098583.1| hypothetical protein Amir_0775 [Actinosynnema mirum DSM 43827]
gi|255919226|gb|ACU34737.1| conserved hypothetical protein [Actinosynnema mirum DSM 43827]
Length=180
Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 96/178 (54%), Positives = 119/178 (67%), Gaps = 1/178 (0%)
Query 9 GDWTVAVYCAA-SPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGW 67
G+ TV VYC + S L+LA +VG IAGRGW L WGGG S MGAVA A R G
Sbjct 2 GELTVTVYCGSLSTVPQSYLDLATDVGERIAGRGWDLAWGGGKRSMMGAVAQAVRDGGRR 61
Query 68 TVGVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWT 127
T GVIP+ LV RE AD DAD+L+V +TM +RK +ME DAF+ LPGG+GTL+ELF+ WT
Sbjct 62 TTGVIPRSLVEREWADSDADDLLVVETMRDRKALMEAHGDAFLALPGGIGTLEELFEVWT 121
Query 128 DGYLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACA 185
L H KP+V++D GH+ GL WL L D G+V+P AM L ++D+V AL ACA
Sbjct 122 SRTLSMHAKPVVLLDVDGHYTGLVRWLGELRDRGFVAPAAMGMLTIIDDVDAALDACA 179
>gi|326381458|ref|ZP_08203152.1| hypothetical protein SCNU_00865 [Gordonia neofelifaecis NRRL
B-59395]
gi|326199705|gb|EGD56885.1| hypothetical protein SCNU_00865 [Gordonia neofelifaecis NRRL
B-59395]
Length=178
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/169 (53%), Positives = 119/169 (71%), Gaps = 0/169 (0%)
Query 13 VAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVGVI 72
+ VYCA+ P + L LAA G AIA G TLV GGG+VS MG++A AR GG T+G+I
Sbjct 4 ICVYCASGPVDSAYLALAARTGEAIAAAGHTLVSGGGNVSMMGSLARGAREAGGRTIGII 63
Query 73 PKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGYLG 132
P+ L+ +E+AD DADELIVTDTM ERK++M++ SD FI LPGG+GT +ELF+ WT YLG
Sbjct 64 PEHLMAKEVADLDADELIVTDTMRERKRLMDELSDGFITLPGGIGTFEELFETWTGAYLG 123
Query 133 THDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDAL 181
HDKPIV+++ G +D L WL+ L G+V+ A+ +L V V D++
Sbjct 124 VHDKPIVLLNHEGFYDPLIGWLDDLAARGFVADRALGKLKVCATVGDSI 172
>gi|262203202|ref|YP_003274410.1| hypothetical protein Gbro_3313 [Gordonia bronchialis DSM 43247]
gi|262086549|gb|ACY22517.1| conserved hypothetical protein [Gordonia bronchialis DSM 43247]
Length=187
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/173 (54%), Positives = 124/173 (72%), Gaps = 0/173 (0%)
Query 13 VAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVGVI 72
V VYCA+ P L LAA+VG A+A G V GGG++S MGA+A AARA GG TVG+I
Sbjct 4 VCVYCASGPVDGRFLALAADVGTALARAGHVTVSGGGNISMMGALAEAARAAGGRTVGII 63
Query 73 PKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGYLG 132
P+ L+ RE+AD DADEL++T+TM ERK++M++R+DAFI LPGG+GTL+ELF+ WT GYLG
Sbjct 64 PRALMDREVADLDADELVITETMRERKRLMDERADAFITLPGGIGTLEELFETWTAGYLG 123
Query 133 THDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACA 185
H KP+V++DP+ + L WL L G+V A+ RL++ ++V AL A
Sbjct 124 MHAKPVVLLDPFDFYAPLLTWLRDLQGQGFVGARALSRLLITESVAGALELIA 176
>gi|86742519|ref|YP_482919.1| hypothetical protein Francci3_3840 [Frankia sp. CcI3]
gi|86569381|gb|ABD13190.1| conserved hypothetical protein 730 [Frankia sp. CcI3]
Length=201
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/165 (54%), Positives = 115/165 (70%), Gaps = 9/165 (5%)
Query 12 TVAVYCAASPTHAELLE-----LAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGG 66
V VYCA+S EL++ LAA+ G +A RG TLV GGG VS MGA+A A RA GG
Sbjct 2 NVCVYCASS----ELIDPSYVLLAAQTGTELARRGHTLVSGGGSVSCMGAIARAVRASGG 57
Query 67 WTVGVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAW 126
+TVGVIP+ LV E++D DADE+IVT+TM ERK +M+ RSDAF+ LPGG+GTL+EL + W
Sbjct 58 YTVGVIPRALVAMEVSDLDADEIIVTETMRERKALMDARSDAFLALPGGLGTLEELLEVW 117
Query 127 TDGYLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERL 171
G L H KP+V++DP G F LR ++ ++D G+V P A + L
Sbjct 118 VAGVLRMHTKPVVLLDPDGVFAHLRILVDEMVDRGFVRPRARDTL 162
>gi|302869752|ref|YP_003838389.1| hypothetical protein Micau_5307 [Micromonospora aurantiaca ATCC
27029]
gi|315503766|ref|YP_004082653.1| hypothetical protein ML5_2985 [Micromonospora sp. L5]
gi|302572611|gb|ADL48813.1| Conserved hypothetical protein CHP00730 [Micromonospora aurantiaca
ATCC 27029]
gi|315410385|gb|ADU08502.1| Conserved hypothetical protein CHP00730 [Micromonospora sp. L5]
Length=181
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 89/171 (53%), Positives = 116/171 (68%), Gaps = 1/171 (0%)
Query 12 TVAVYCAASPT-HAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVG 70
V V+CA+S T A L LA E G +A RG TLV GGG V MGAV ARA GG TVG
Sbjct 3 NVCVFCASSRTLDARWLALATETGEELARRGHTLVSGGGCVGMMGAVVQGARAAGGRTVG 62
Query 71 VIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGY 130
VIP+ LV E+AD D+DEL+VTD++ RK +M+++SDAF+ LPGG+GTLDELF+ WT
Sbjct 63 VIPQSLVDLEVADLDSDELLVTDSLASRKTLMDEKSDAFVALPGGLGTLDELFEVWTTAT 122
Query 131 LGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDAL 181
L H KP+V+VD G + L W+ GL + ++ P A++ L+V D+V AL
Sbjct 123 LALHAKPMVIVDVDGFYRPLLDWIRGLGEQRFLKPAALDLLLVADSVPAAL 173
>gi|312194603|ref|YP_004014664.1| hypothetical protein FraEuI1c_0716 [Frankia sp. EuI1c]
gi|311225939|gb|ADP78794.1| Conserved hypothetical protein CHP00730 [Frankia sp. EuI1c]
Length=200
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/156 (54%), Positives = 111/156 (72%), Gaps = 1/156 (0%)
Query 13 VAVYCAASP-THAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVGV 71
+ VYC++S + LA +VG +A RG +LV GGG +S MGAVA +ARA G T+GV
Sbjct 3 ICVYCSSSERIDPGYVLLAGQVGTELAARGHSLVSGGGSISCMGAVARSARAGGASTLGV 62
Query 72 IPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGYL 131
IP+ L+ E++D DADELIVT+TM ERK IM++R+DAF+ LPGG+GTL+ELF+ W L
Sbjct 63 IPRKLLDLEVSDTDADELIVTETMRERKAIMDERADAFLALPGGLGTLEELFEIWVAAML 122
Query 132 GTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTA 167
G H KPIV++DP G F L ++GL+D G+V P A
Sbjct 123 GMHAKPIVVLDPDGVFAHLHTLVDGLVDRGFVRPEA 158
>gi|296270982|ref|YP_003653614.1| hypothetical protein Tbis_3024 [Thermobispora bispora DSM 43833]
gi|296093769|gb|ADG89721.1| conserved hypothetical protein [Thermobispora bispora DSM 43833]
Length=191
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/170 (49%), Positives = 111/170 (66%), Gaps = 1/170 (0%)
Query 13 VAVYCAASPT-HAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVGV 71
V VYC++S + +LA + G +A RG TLV GG VS MG +A A RA GG T+GV
Sbjct 3 VCVYCSSSEKIDQKYRDLARDAGTELARRGHTLVSGGAKVSCMGEIARAVRAAGGRTIGV 62
Query 72 IPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGYL 131
IP+ LV E+AD DADELIVT M ERK +M+ RSDAF+VLPGG+GTL+ELF+ WT L
Sbjct 63 IPRALVDVEIADTDADELIVTADMRERKGVMDARSDAFLVLPGGIGTLEELFEIWTTRVL 122
Query 132 GTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDAL 181
G HD+P+V++DPWG F LR + + G+ P + + +++A
Sbjct 123 GLHDRPLVVLDPWGFFAPLRELVARMHAEGFTRPNVFDVIAWAATIEEAF 172
>gi|111225443|ref|YP_716237.1| putative lysine decarboxylase [Frankia alni ACN14a]
gi|111152975|emb|CAJ64723.1| conserved hypothetical protein; Putative lysine decarboxylase
[Frankia alni ACN14a]
Length=211
Score = 154 bits (388), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/172 (53%), Positives = 120/172 (70%), Gaps = 1/172 (0%)
Query 11 WTVAVYCAASPT-HAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTV 69
+ VYCA+S A +ELAA GA +A RG TLV GGG VS MGAVA AARA G T+
Sbjct 1 MNICVYCASSSAIDAAHVELAARTGAELARRGHTLVSGGGSVSCMGAVARAARAGGAHTI 60
Query 70 GVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDG 129
GVIP+ L+ E++D DADELIVTDTM ERK +M+ R+D F+ LPGG+GTL+EL + W
Sbjct 61 GVIPRALLALEVSDTDADELIVTDTMRERKALMDARADGFLALPGGLGTLEELLEIWVAR 120
Query 130 YLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDAL 181
L H KP+V++DP G F LR ++GL+++G+V P A + L+ D+V +AL
Sbjct 121 VLSLHTKPVVVLDPGGVFGHLRLLVDGLVESGFVRPVARDTLIWADSVDEAL 172
>gi|296283332|ref|ZP_06861330.1| decarboxylase family protein [Citromicrobium bathyomarinum JL354]
Length=282
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/174 (45%), Positives = 113/174 (65%), Gaps = 1/174 (0%)
Query 13 VAVYC-AASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVGV 71
+A+YC AA+P LELA +VGA +A RG +V+GGG + MGA+A A + GG +GV
Sbjct 93 LAIYCGAATPPDPRYLELARDVGALLAQRGIGVVYGGGRLGLMGALAQGALSEGGEVIGV 152
Query 72 IPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGYL 131
IP +V RE A+HD +LI DTM +RKQ D +D FI LPGG+GT+DELF+A + +
Sbjct 153 IPHAMVEREFANHDCTQLITVDTMHQRKQHFTDLADGFITLPGGMGTMDELFEALSWAQI 212
Query 132 GTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACA 185
G H+ P+ +++ +G +D L ++N + DTG+V T E L V D++ + L A
Sbjct 213 GYHENPVGLLNAFGFYDDLVQFVNRMADTGFVRATHREILQVADSLPELLDKLA 266
>gi|238060937|ref|ZP_04605646.1| hypothetical protein MCAG_01903 [Micromonospora sp. ATCC 39149]
gi|237882748|gb|EEP71576.1| hypothetical protein MCAG_01903 [Micromonospora sp. ATCC 39149]
Length=181
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/170 (50%), Positives = 112/170 (66%), Gaps = 1/170 (0%)
Query 13 VAVYCAASPTHAEL-LELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVGV 71
+ V+CA+S T + L+LAAE G +A RG TLV GGG V MGA+A AR+ GG TVGV
Sbjct 4 ICVFCASSRTLDQRWLDLAAEAGRELARRGHTLVSGGGCVGMMGALADGARSAGGRTVGV 63
Query 72 IPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGYL 131
IP+ LV E+AD +DEL+VT +M +RK +M ++SDAF+ LPGG+GTLDELF+ WT L
Sbjct 64 IPQSLVDLEVADLASDELLVTASMADRKTLMIEKSDAFLTLPGGLGTLDELFEVWTTATL 123
Query 132 GTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDAL 181
H KP+V+VD G + + WL L +V P L+V D++ AL
Sbjct 124 ALHAKPMVLVDADGFYRPMLDWLTTLTARDFVKPAGHSLLLVADSLPAAL 173
>gi|341613641|ref|ZP_08700510.1| decarboxylase family protein [Citromicrobium sp. JLT1363]
Length=193
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/174 (44%), Positives = 113/174 (65%), Gaps = 1/174 (0%)
Query 13 VAVYC-AASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVGV 71
+A+YC +A+P +ELA EVG+ +A RG +V+GGG + MGA+A A A GG +GV
Sbjct 4 LAIYCGSATPPDPRYVELAREVGSDLARRGIGVVYGGGRLGLMGALAQGALAEGGEVIGV 63
Query 72 IPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGYL 131
IP +V RE A+HD +LI DTM ERK D +D F+ LPGG+GT+DELF+A + +
Sbjct 64 IPHAMVEREFANHDCTQLITVDTMHERKARFTDLADGFVTLPGGIGTMDELFEALSWAQI 123
Query 132 GTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRACA 185
G H+ P+ +++ +G +DGL ++N + DTG++ T E L V D++ + L A
Sbjct 124 GYHEMPVGLLNAFGFYDGLIQFVNQMGDTGFIRATHREILQVADSLPELLDKLA 177
>gi|319950855|ref|ZP_08024739.1| lysine decarboxylase [Dietzia cinnamea P4]
gi|319435510|gb|EFV90746.1| lysine decarboxylase [Dietzia cinnamea P4]
Length=184
Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/172 (57%), Positives = 123/172 (72%), Gaps = 0/172 (0%)
Query 13 VAVYCAASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVGVI 72
V VYCA+S LLE+A EVG AIA RGW+LV GGG+VS MGA+A AARA G TVGVI
Sbjct 9 VCVYCASSTYDPRLLEIATEVGDAIARRGWSLVSGGGNVSMMGALAEAARAGGARTVGVI 68
Query 73 PKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGYLG 132
P+ L RE+AD ADEL+V TM ERK+ ME+RSDAF+ LPGG+GT++E+F+ WT LG
Sbjct 69 PEGLRVREVADTAADELVVVTTMRERKREMEERSDAFLTLPGGIGTMEEMFEMWTSASLG 128
Query 133 THDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRAC 184
H KP+V+ DP G + L W+ GL + G V P A++ LVV +++ AL AC
Sbjct 129 FHYKPVVLYDPIGFYRPLLDWVYGLAEQGLVKPEALDCLVVREDLDAALDAC 180
>gi|330469986|ref|YP_004407729.1| hypothetical protein VAB18032_00225 [Verrucosispora maris AB-18-032]
gi|328812957|gb|AEB47129.1| hypothetical protein VAB18032_00225 [Verrucosispora maris AB-18-032]
Length=181
Score = 150 bits (379), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/170 (48%), Positives = 107/170 (63%), Gaps = 1/170 (0%)
Query 13 VAVYCAASPTHAEL-LELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVGV 71
+ V+CA+S T + L+LA GA IA RG TLV GGG V MGA+ AR+ GG T+GV
Sbjct 4 ICVFCASSRTLDQRWLDLATATGAEIARRGHTLVSGGGCVGMMGALVDGARSAGGRTIGV 63
Query 72 IPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGYL 131
IP+ LV E+AD +DEL+VTD+M RK +M ++SDAF+ LPGG+GTLDELF+ WT L
Sbjct 64 IPQALVDLEVADLASDELVVTDSMASRKVVMIEKSDAFLTLPGGLGTLDELFEVWTTATL 123
Query 132 GTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDAL 181
H KP+V+VD G + L WL + ++ P L D + AL
Sbjct 124 ALHRKPMVLVDTDGFYSPLVEWLRNVTAQNFLKPGGFNLLQFADTLPAAL 173
>gi|271969618|ref|YP_003343814.1| hypothetical protein Sros_8427 [Streptosporangium roseum DSM
43021]
gi|270512793|gb|ACZ91071.1| conserved hypothetical protein [Streptosporangium roseum DSM
43021]
Length=195
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/171 (52%), Positives = 117/171 (69%), Gaps = 1/171 (0%)
Query 13 VAVYCAASPT-HAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVGV 71
+ V+ A+S + L LA EVGA +A RG LV GG VS MGAVA AARA GG T+GV
Sbjct 3 ICVFLASSQKIDNKYLTLAEEVGAELARRGHALVSGGAKVSCMGAVARAARAGGGRTIGV 62
Query 72 IPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGYL 131
IP+ LV E+AD ++DELIVT M ERK IM+ RSDAF+VLPGG+GTL+ELF+ WT +
Sbjct 63 IPQALVDIEVADEESDELIVTTDMRERKGIMDARSDAFLVLPGGIGTLEELFEIWTSRTI 122
Query 132 GTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALR 182
G HDKP+V++DPWG + LR+ + G+ + G+ P + + V++A R
Sbjct 123 GLHDKPLVLLDPWGVYAPLRSLVEGMHEQGFTRPDVFDAISWTTTVEEAFR 173
>gi|288922604|ref|ZP_06416782.1| conserved hypothetical protein [Frankia sp. EUN1f]
gi|288346035|gb|EFC80386.1| conserved hypothetical protein [Frankia sp. EUN1f]
Length=200
Score = 147 bits (372), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/171 (52%), Positives = 117/171 (69%), Gaps = 1/171 (0%)
Query 12 TVAVYCAASP-THAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVG 70
+ VYC++S + LAAEVGA +A RG TLV GGG VS MGAVA AARA G T+G
Sbjct 2 NICVYCSSSELIDPSFVLLAAEVGAELARRGHTLVSGGGSVSCMGAVARAARAGGAHTIG 61
Query 71 VIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGY 130
VIP+ L+ E+ D D+DELIVT TM ERK IM+DR+D F+ LPGG+GTL+ELF+ W
Sbjct 62 VIPEALLAMEVGDTDSDELIVTATMRERKAIMDDRADGFLALPGGLGTLEELFEIWVAAL 121
Query 131 LGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDAL 181
LG HDKP+V+++ G F LR ++ L+ G+V P A + L+ ++ +AL
Sbjct 122 LGLHDKPVVVLESEGVFTHLRLLVDDLVGRGFVRPLARDTLIWATSITEAL 172
>gi|269125425|ref|YP_003298795.1| hypothetical protein Tcur_1174 [Thermomonospora curvata DSM 43183]
gi|268310383|gb|ACY96757.1| conserved hypothetical protein [Thermomonospora curvata DSM 43183]
Length=197
Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/162 (55%), Positives = 109/162 (68%), Gaps = 1/162 (0%)
Query 9 GDWTVAVYCAASPT-HAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGW 67
G + V+CA+S LELA +VGA +A RG +LV GG VS MGAVA AARA G
Sbjct 2 GGLAICVFCASSSRIDRRHLELAEQVGAELARRGHSLVSGGAKVSCMGAVARAARAGGAR 61
Query 68 TVGVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWT 127
TVGVIP+ LV E+AD D DELIVT M RK M+ RSDAF+VLPGG+GTL+EL + WT
Sbjct 62 TVGVIPQALVSVEIADQDNDELIVTPDMRSRKAEMDRRSDAFLVLPGGIGTLEELLEIWT 121
Query 128 DGYLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAME 169
LG HDKP+V++DP G ++ LR + L D G+V P A +
Sbjct 122 SRVLGMHDKPLVILDPHGMYEPLRDLVVKLADHGFVRPRAFD 163
>gi|168703174|ref|ZP_02735451.1| hypothetical protein GobsU_26826 [Gemmata obscuriglobus UQM 2246]
Length=196
Score = 147 bits (370), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 81/171 (48%), Positives = 107/171 (63%), Gaps = 1/171 (0%)
Query 12 TVAVYC-AASPTHAELLELAAEVGAAIAGRGWTLVWGGGHVSAMGAVASAARACGGWTVG 70
+V V+C +A+ T+ E A E+GAA+AGRG LV+GGG V MG VASA A GG VG
Sbjct 5 SVCVFCGSAAGTNPLYAEAARELGAALAGRGLALVYGGGRVGLMGVVASATLAAGGVVVG 64
Query 71 VIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTDGY 130
VIP L +E+A D ELIV +TM ERK +M DR+ AF+ LPGG GT DELF+ T
Sbjct 65 VIPHSLALKEIAQEDCTELIVVNTMHERKALMADRAGAFVALPGGFGTGDELFEILTWAQ 124
Query 131 LGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDAL 181
LG H KP+ +++ G F L AWL+ ++ G + E L+V + V + L
Sbjct 125 LGIHTKPVALLNVNGFFTPLLAWLDHIVSEGLLKQKHRELLLVAETVPELL 175
Lambda K H
0.320 0.136 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 180588168880
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40