BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1219c
Length=212
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608359|ref|NP_215735.1| transcriptional regulatory protein ... 432 2e-119
gi|306807105|ref|ZP_07443773.1| transcriptional regulator [Mycob... 428 2e-118
gi|121637148|ref|YP_977371.1| putative transcriptional regulator... 427 3e-118
gi|333989833|ref|YP_004522447.1| transcriptional regulator [Myco... 356 2e-96
gi|296170123|ref|ZP_06851722.1| TetR family transcriptional regu... 352 1e-95
gi|240169003|ref|ZP_04747662.1| transcriptional regulator [Mycob... 347 7e-94
gi|126436585|ref|YP_001072276.1| TetR family transcriptional reg... 345 2e-93
gi|183984191|ref|YP_001852482.1| transcriptional regulator [Myco... 342 2e-92
gi|254822086|ref|ZP_05227087.1| transcriptional regulator [Mycob... 340 1e-91
gi|108800960|ref|YP_641157.1| TetR family transcriptional regula... 336 1e-90
gi|342862102|ref|ZP_08718745.1| putative transcriptional regulat... 328 3e-88
gi|118471216|ref|YP_889324.1| transcriptional regulatory protein... 320 9e-86
gi|120405450|ref|YP_955279.1| TetR family transcriptional regula... 314 7e-84
gi|118465256|ref|YP_880607.1| TetR family transcriptional regula... 304 5e-81
gi|254774239|ref|ZP_05215755.1| transcriptional regulator, TetR ... 304 6e-81
gi|41408657|ref|NP_961493.1| hypothetical protein MAP2559 [Mycob... 301 3e-80
gi|336458554|gb|EGO37521.1| transcriptional regulator, tetR fami... 298 3e-79
gi|315443254|ref|YP_004076133.1| TetR family transcriptional reg... 292 2e-77
gi|145222786|ref|YP_001133464.1| TetR family transcriptional reg... 285 5e-75
gi|120402407|ref|YP_952236.1| TetR family transcriptional regula... 226 1e-57
gi|111019947|ref|YP_702919.1| TetR family transcriptional regula... 224 5e-57
gi|226362093|ref|YP_002779871.1| TetR family transcriptional reg... 221 6e-56
gi|169628451|ref|YP_001702100.1| TetR family transcriptional reg... 215 3e-54
gi|312137603|ref|YP_004004939.1| tetr family transcriptional reg... 199 2e-49
gi|325677425|ref|ZP_08157089.1| TetR family transcriptional regu... 198 5e-49
gi|54024447|ref|YP_118689.1| putative transcriptional regulator ... 194 8e-48
gi|296131369|ref|YP_003638619.1| TetR family transcriptional reg... 191 5e-47
gi|330467454|ref|YP_004405197.1| TetR family transcriptional reg... 190 1e-46
gi|317509100|ref|ZP_07966729.1| tetR family bacterial regulatory... 189 2e-46
gi|297562603|ref|YP_003681577.1| TetR family transcriptional reg... 188 4e-46
gi|284028457|ref|YP_003378388.1| TetR family transcriptional reg... 188 6e-46
gi|332671999|ref|YP_004455007.1| regulatory protein TetR [Cellul... 171 5e-41
gi|334335762|ref|YP_004540914.1| regulatory protein TetR [Isopte... 166 1e-39
gi|326328614|ref|ZP_08194954.1| transcriptional regulator, TetR ... 160 1e-37
gi|229819037|ref|YP_002880563.1| TetR family transcriptional reg... 157 7e-37
gi|258651981|ref|YP_003201137.1| TetR family transcriptional reg... 148 6e-34
gi|257068815|ref|YP_003155070.1| transcriptional regulator, tetR... 141 8e-32
gi|229822234|ref|YP_002883760.1| TetR family transcriptional reg... 139 3e-31
gi|269954953|ref|YP_003324742.1| TetR family transcriptional reg... 137 8e-31
gi|296271153|ref|YP_003653785.1| TetR family transcriptional reg... 108 4e-22
gi|159038733|ref|YP_001537986.1| TetR family transcriptional reg... 106 2e-21
gi|145595486|ref|YP_001159783.1| regulatory protein TetR [Salini... 105 3e-21
gi|183982329|ref|YP_001850620.1| transcriptional regulator [Myco... 105 3e-21
gi|88855846|ref|ZP_01130509.1| probable transcriptional regulato... 96.3 3e-18
gi|256392749|ref|YP_003114313.1| TetR family transcriptional reg... 86.3 3e-15
gi|163839632|ref|YP_001624037.1| TetR family transcriptional reg... 85.1 6e-15
gi|240173230|ref|ZP_04751888.1| transcriptional regulator [Mycob... 84.7 9e-15
gi|291302765|ref|YP_003514043.1| TetR family transcriptional reg... 83.2 2e-14
gi|302524900|ref|ZP_07277242.1| transcriptional regulator [Strep... 82.8 3e-14
gi|260904178|ref|ZP_05912500.1| TetR family transcriptional regu... 82.4 4e-14
>gi|15608359|ref|NP_215735.1| transcriptional regulatory protein [Mycobacterium tuberculosis
H37Rv]
gi|15840663|ref|NP_335700.1| TetR family transcriptional regulator [Mycobacterium tuberculosis
CDC1551]
gi|31792412|ref|NP_854905.1| transcriptional regulatory protein [Mycobacterium bovis AF2122/97]
71 more sequence titles
Length=212
Score = 432 bits (1110), Expect = 2e-119, Method: Compositional matrix adjust.
Identities = 212/212 (100%), Positives = 212/212 (100%), Gaps = 0/212 (0%)
Query 1 MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60
MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF
Sbjct 1 MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60
Query 61 VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120
VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA
Sbjct 61 VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120
Query 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180
EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL
Sbjct 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180
Query 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEAHVG 212
PSLEVYTEGLLADRAMYEAFLAEAQQGEAHVG
Sbjct 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEAHVG 212
>gi|306807105|ref|ZP_07443773.1| transcriptional regulator [Mycobacterium tuberculosis SUMu007]
gi|306967302|ref|ZP_07479963.1| transcriptional regulator [Mycobacterium tuberculosis SUMu009]
gi|308346447|gb|EFP35298.1| transcriptional regulator [Mycobacterium tuberculosis SUMu007]
gi|308355019|gb|EFP43870.1| transcriptional regulator [Mycobacterium tuberculosis SUMu009]
Length=212
Score = 428 bits (1101), Expect = 2e-118, Method: Compositional matrix adjust.
Identities = 211/212 (99%), Positives = 211/212 (99%), Gaps = 0/212 (0%)
Query 1 MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60
MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF
Sbjct 1 MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60
Query 61 VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120
VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA
Sbjct 61 VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120
Query 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180
EEYLDEGVRAGTVKPSRDPRARARFLAIT GGGFLLYLQMHENPTDLRAALRDYAHDMVL
Sbjct 121 EEYLDEGVRAGTVKPSRDPRARARFLAITRGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180
Query 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEAHVG 212
PSLEVYTEGLLADRAMYEAFLAEAQQGEAHVG
Sbjct 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEAHVG 212
>gi|121637148|ref|YP_977371.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224989623|ref|YP_002644310.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Tokyo 172]
gi|121492795|emb|CAL71266.1| Probable transcriptional regulatory protein [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224772736|dbj|BAH25542.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Tokyo 172]
gi|341601166|emb|CCC63839.1| probable transcriptional regulatory protein [Mycobacterium bovis
BCG str. Moreau RDJ]
Length=212
Score = 427 bits (1099), Expect = 3e-118, Method: Compositional matrix adjust.
Identities = 211/212 (99%), Positives = 211/212 (99%), Gaps = 0/212 (0%)
Query 1 MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60
MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF
Sbjct 1 MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60
Query 61 VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120
VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKML QKMIDNA
Sbjct 61 VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLCQKMIDNA 120
Query 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180
EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL
Sbjct 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180
Query 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEAHVG 212
PSLEVYTEGLLADRAMYEAFLAEAQQGEAHVG
Sbjct 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEAHVG 212
>gi|333989833|ref|YP_004522447.1| transcriptional regulator [Mycobacterium sp. JDM601]
gi|333485801|gb|AEF35193.1| transcriptional regulator [Mycobacterium sp. JDM601]
Length=208
Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 166/201 (83%), Positives = 187/201 (94%), Gaps = 0/201 (0%)
Query 1 MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60
MRSADLTA A+IR+AAIEQFGRHGFGV +RAIAEAAGVSAALV+HHFGSKEGLR+ACD+F
Sbjct 1 MRSADLTASAKIRDAAIEQFGRHGFGVSVRAIAEAAGVSAALVMHHFGSKEGLRRACDEF 60
Query 61 VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120
VAEEIRS K+ A++S DP TW A MAEIESYAPLMAYLVR+MQSGGELA LW++M+DNA
Sbjct 61 VAEEIRSGKSEAMRSADPATWFAAMAEIESYAPLMAYLVRTMQSGGELATTLWRRMVDNA 120
Query 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180
EEYLDEGVRAGT+KPSRDP+ARAR++AITGGG FL+YLQMHENPTDLRA LRDY+ DMVL
Sbjct 121 EEYLDEGVRAGTLKPSRDPKARARYVAITGGGAFLMYLQMHENPTDLRAVLRDYSRDMVL 180
Query 181 PSLEVYTEGLLADRAMYEAFL 201
PSLE+YTEGLLADR MY+AFL
Sbjct 181 PSLEIYTEGLLADRTMYDAFL 201
>gi|296170123|ref|ZP_06851722.1| TetR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895225|gb|EFG74938.1| TetR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=215
Score = 352 bits (904), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 174/210 (83%), Positives = 191/210 (91%), Gaps = 0/210 (0%)
Query 1 MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60
MRSADLTA ARIR+AAIEQFG GFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDD+
Sbjct 4 MRSADLTAAARIRDAAIEQFGERGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDY 63
Query 61 VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120
+AEEIR+SK+ AL+S DP TW AQMAEIESYAP+MAYLVRSMQSGGELA MLW++MIDNA
Sbjct 64 IAEEIRTSKSEALQSKDPATWFAQMAEIESYAPMMAYLVRSMQSGGELANMLWRRMIDNA 123
Query 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180
EEYLDEGVR GT+KPSRDPRARAR+L ITGGGGFLLYLQMHE PTD+RA LRDYA +MVL
Sbjct 124 EEYLDEGVRVGTIKPSRDPRARARYLGITGGGGFLLYLQMHETPTDIRAVLRDYAREMVL 183
Query 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEAH 210
P+LE+YTEGL+ DR MY+AFLA QGE H
Sbjct 184 PALEIYTEGLMVDRTMYDAFLAAEDQGETH 213
>gi|240169003|ref|ZP_04747662.1| transcriptional regulator [Mycobacterium kansasii ATCC 12478]
Length=212
Score = 347 bits (890), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 172/211 (82%), Positives = 192/211 (91%), Gaps = 0/211 (0%)
Query 1 MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60
MRS DLTA ARIR+AAIEQFG+HGFGVGLR IAEAA VSAALVIHHFGSK+GLRKACDD+
Sbjct 1 MRSVDLTAAARIRDAAIEQFGQHGFGVGLRTIAEAAEVSAALVIHHFGSKDGLRKACDDY 60
Query 61 VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120
VAEEIRS K+ A++S DP TWL Q+A++ESYAPLMAYLVRSMQSGGELA LWQKMIDNA
Sbjct 61 VAEEIRSEKSTAMQSRDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMTLWQKMIDNA 120
Query 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180
E+YL+EGVRAGTVKPSRDP+ARA++LAITGGGGFLLYLQMH PTDLRA LRDY DMVL
Sbjct 121 EDYLEEGVRAGTVKPSRDPQARAKYLAITGGGGFLLYLQMHATPTDLRAVLRDYTRDMVL 180
Query 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEAHV 211
P+LEVYT+GLL DR+MYEAFLAE +QGE+ V
Sbjct 181 PALEVYTDGLLTDRSMYEAFLAEEKQGESDV 211
>gi|126436585|ref|YP_001072276.1| TetR family transcriptional regulator [Mycobacterium sp. JLS]
gi|126236385|gb|ABN99785.1| transcriptional regulator, TetR family [Mycobacterium sp. JLS]
Length=228
Score = 345 bits (885), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 165/214 (78%), Positives = 186/214 (87%), Gaps = 2/214 (0%)
Query 1 MRSA--DLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACD 58
MRS D TA ARIR+AAIEQFG+HGFGVG+RAIAEAAGVSAALVIHHFGSK+GLR ACD
Sbjct 1 MRSVAEDRTAVARIRDAAIEQFGKHGFGVGVRAIAEAAGVSAALVIHHFGSKDGLRAACD 60
Query 59 DFVAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMID 118
D+VAEEIRS K+AA++SNDP TWLAQ++EIESYAPLMAYLVRSMQSG +LAKMLW++MID
Sbjct 61 DYVAEEIRSGKSAAIQSNDPATWLAQLSEIESYAPLMAYLVRSMQSGSDLAKMLWRRMID 120
Query 119 NAEEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDM 178
N E+YLDEGVRAGTVKPS DPR RARFLA+ GGGFLLYLQMHE+PTDLR LRDY+ DM
Sbjct 121 NVEQYLDEGVRAGTVKPSHDPRGRARFLAMASGGGFLLYLQMHEDPTDLRRVLRDYSDDM 180
Query 179 VLPSLEVYTEGLLADRAMYEAFLAEAQQGEAHVG 212
VLP+LE+YT GL+AD MY+AFLA H G
Sbjct 181 VLPALEIYTNGLMADSTMYDAFLANQGASSTHQG 214
>gi|183984191|ref|YP_001852482.1| transcriptional regulator [Mycobacterium marinum M]
gi|183177517|gb|ACC42627.1| transcriptional regulator [Mycobacterium marinum M]
Length=212
Score = 342 bits (877), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 169/210 (81%), Positives = 189/210 (90%), Gaps = 0/210 (0%)
Query 1 MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60
MRS DLTA ARIR+AAIEQFG+HGFGV LRAIAE AGVSAALVIHHFGSKEGLRKACD++
Sbjct 1 MRSVDLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNY 60
Query 61 VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120
VAEEIRS K A++SNDP TWL Q+A++ESYAPLMAYLVRSMQSGGELA MLWQ+MIDNA
Sbjct 61 VAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNA 120
Query 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180
EEYL GVRAGT+K SRDP+ARA+FLAITG GGFLLYLQMH+ PTDLRA LRDYA DM+L
Sbjct 121 EEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDMLL 180
Query 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEAH 210
PSLE+YTEGL+AD MY+AFLA+ QGE+H
Sbjct 181 PSLEIYTEGLMADSTMYDAFLAQDNQGESH 210
>gi|254822086|ref|ZP_05227087.1| transcriptional regulator [Mycobacterium intracellulare ATCC
13950]
Length=212
Score = 340 bits (871), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 164/210 (79%), Positives = 192/210 (92%), Gaps = 0/210 (0%)
Query 1 MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60
MRSADLTA ARIR+AAIEQFG HGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKAC+D+
Sbjct 1 MRSADLTAAARIRDAAIEQFGEHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACEDY 60
Query 61 VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120
+AE+IR++K+ A++SNDP TW AQ+AEIE YAPLMAYLVRSMQ+GG+LA M+W++MIDN
Sbjct 61 IAEKIRNTKSEAIQSNDPATWFAQLAEIEDYAPLMAYLVRSMQTGGDLANMMWRRMIDNT 120
Query 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180
E Y++EGVRAGT+KPSRDP+ARA++LAITGGGGFLLY+QMH+ PTDLRA LRDY+ DM+L
Sbjct 121 EGYMEEGVRAGTIKPSRDPQARAKYLAITGGGGFLLYIQMHDTPTDLRAVLRDYSRDMIL 180
Query 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEAH 210
P+LEVYTEGLL DR MY+AFLA QGE H
Sbjct 181 PALEVYTEGLLTDRTMYDAFLAAEDQGEFH 210
>gi|108800960|ref|YP_641157.1| TetR family transcriptional regulator [Mycobacterium sp. MCS]
gi|119870100|ref|YP_940052.1| TetR family transcriptional regulator [Mycobacterium sp. KMS]
gi|108771379|gb|ABG10101.1| transcriptional regulator, TetR family [Mycobacterium sp. MCS]
gi|119696189|gb|ABL93262.1| transcriptional regulator, TetR family [Mycobacterium sp. KMS]
Length=228
Score = 336 bits (861), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 159/214 (75%), Positives = 183/214 (86%), Gaps = 2/214 (0%)
Query 1 MRSADL--TAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACD 58
MRSAD T ARIR+AAIEQFGRHGFGVG+R IAE+AGVS ALVIHHFGSK+GLRKACD
Sbjct 1 MRSADADRTTLARIRDAAIEQFGRHGFGVGVRTIAESAGVSPALVIHHFGSKDGLRKACD 60
Query 59 DFVAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMID 118
++VAE IRS K+A+++SNDP TWLAQ+AEIESYAPLMAYLVRS+QSGG+LA+ W++MID
Sbjct 61 EYVAEVIRSDKSASIQSNDPATWLAQIAEIESYAPLMAYLVRSLQSGGDLARAFWRRMID 120
Query 119 NAEEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDM 178
N E+YLDEGVRAGTVKPS DPR RARFLA+ GGGFLLYLQMHE+PTDLR LRDY+ DM
Sbjct 121 NVEQYLDEGVRAGTVKPSHDPRGRARFLAMASGGGFLLYLQMHEDPTDLRRVLRDYSDDM 180
Query 179 VLPSLEVYTEGLLADRAMYEAFLAEAQQGEAHVG 212
VLP+LE+YT GL+AD MY+AFLA H G
Sbjct 181 VLPALEIYTNGLMADSTMYDAFLANQGASSTHQG 214
>gi|342862102|ref|ZP_08718745.1| putative transcriptional regulatory protein [Mycobacterium colombiense
CECT 3035]
gi|342130406|gb|EGT83721.1| putative transcriptional regulatory protein [Mycobacterium colombiense
CECT 3035]
Length=212
Score = 328 bits (842), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 155/209 (75%), Positives = 187/209 (90%), Gaps = 0/209 (0%)
Query 1 MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60
MRSADLTA ARIR+AAIEQFG HGFGVGLRAIA+AAGVSAALVIHHFGSK+GLRKACDD+
Sbjct 1 MRSADLTAAARIRDAAIEQFGEHGFGVGLRAIADAAGVSAALVIHHFGSKDGLRKACDDY 60
Query 61 VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120
+AEEIR +K+ +KSNDP TW A++AEIE +AP+ AYLVRSMQ+GG+LAKMLW+ MIDN
Sbjct 61 IAEEIRDTKSETIKSNDPATWFARLAEIEEFAPMTAYLVRSMQTGGDLAKMLWRSMIDNV 120
Query 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180
E+Y++EGVRAGT+KPSRDP+ARA+++ ITGGG LLY+QMH+ PTDLRA LRDYA DM+L
Sbjct 121 EQYMEEGVRAGTIKPSRDPKARAKYIGITGGGALLLYIQMHDTPTDLRAVLRDYARDMIL 180
Query 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEA 209
P+LE+YT+GL+ DR MY+AFLA QGE+
Sbjct 181 PALEIYTDGLMVDRTMYDAFLAAEDQGES 209
>gi|118471216|ref|YP_889324.1| transcriptional regulatory protein [Mycobacterium smegmatis str.
MC2 155]
gi|118172503|gb|ABK73399.1| probable transcriptional regulatory protein [Mycobacterium smegmatis
str. MC2 155]
Length=216
Score = 320 bits (820), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 152/208 (74%), Positives = 174/208 (84%), Gaps = 0/208 (0%)
Query 5 DLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAEE 64
D TA ARIR+ AIEQFG+HGF VGLR+IAEAAGVSAALVIHHFGSKEGLRKACDD VAE
Sbjct 3 DRTAMARIRDTAIEQFGQHGFNVGLRSIAEAAGVSAALVIHHFGSKEGLRKACDDHVAEV 62
Query 65 IRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAEEYL 124
I K ++ ++DP TWLA +AEIESYAPLMAYLVRSMQSG ELAK W++M+DNAE+YL
Sbjct 63 ILELKTESMHASDPATWLAYVAEIESYAPLMAYLVRSMQSGSELAKKFWRRMVDNAEQYL 122
Query 125 DEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVLPSLE 184
+EGVR G +KPSRDPRARARFLAI GGGGFLLYLQMH+NPTDLRA LRDY DM+LP+LE
Sbjct 123 EEGVRTGMLKPSRDPRARARFLAICGGGGFLLYLQMHDNPTDLRAVLRDYGEDMMLPALE 182
Query 185 VYTEGLLADRAMYEAFLAEAQQGEAHVG 212
+Y+ GL+AD MYE FL + + G G
Sbjct 183 IYSHGLMADTTMYETFLHQREAGVPFTG 210
>gi|120405450|ref|YP_955279.1| TetR family transcriptional regulator [Mycobacterium vanbaalenii
PYR-1]
gi|119958268|gb|ABM15273.1| transcriptional regulator, TetR family [Mycobacterium vanbaalenii
PYR-1]
Length=220
Score = 314 bits (804), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 156/208 (75%), Positives = 183/208 (88%), Gaps = 1/208 (0%)
Query 1 MRSAD-LTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDD 59
MRSAD LTA ARIR+AAI+ FGR GF VG+R+IA AAGVS LVIHHFGSK+GLRKACDD
Sbjct 1 MRSADDLTAAARIRDAAIDLFGRDGFAVGVRSIASAAGVSPGLVIHHFGSKDGLRKACDD 60
Query 60 FVAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDN 119
FVAE +R+SK+ A++S+DP TWLAQ+AEIE YAPLMAYLVR++Q+GGELAKMLWQ MIDN
Sbjct 61 FVAETVRASKSEAIQSSDPATWLAQIAEIEEYAPLMAYLVRTLQTGGELAKMLWQNMIDN 120
Query 120 AEEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMV 179
AE+Y++EGVRAGTVKPS DPR RARFLA+ GGGGFLLYLQMH+NPTDLRA LRDY+ +MV
Sbjct 121 AEQYIEEGVRAGTVKPSADPRGRARFLAMAGGGGFLLYLQMHDNPTDLRAVLRDYSEEMV 180
Query 180 LPSLEVYTEGLLADRAMYEAFLAEAQQG 207
LP+LE+YT GL+ D MY+AF+A QG
Sbjct 181 LPALELYTNGLMTDSTMYDAFVARRAQG 208
>gi|118465256|ref|YP_880607.1| TetR family transcriptional regulator [Mycobacterium avium 104]
gi|118166543|gb|ABK67440.1| transcriptional regulator, TetR family protein [Mycobacterium
avium 104]
Length=215
Score = 304 bits (779), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 161/210 (77%), Positives = 189/210 (90%), Gaps = 0/210 (0%)
Query 1 MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60
MRSADLTA ARIR+AAIEQFG HGFGVGLR IAEAAGVSAALVIHHFGSKEGLRKACDD
Sbjct 4 MRSADLTAAARIRDAAIEQFGEHGFGVGLRRIAEAAGVSAALVIHHFGSKEGLRKACDDH 63
Query 61 VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120
+AE+IR SK AL++NDP W Q+AEIE +APL+AY++RSMQ+GG+LAKMLW++MI+NA
Sbjct 64 IAEQIRESKTEALQTNDPAVWFGQLAEIEEFAPLIAYVLRSMQTGGDLAKMLWRQMIENA 123
Query 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180
E YL+EGVRAGT+KPSRDPRARA++L ITGGGG LLYLQMH+NPTDLRA LRDY+ DM+L
Sbjct 124 EGYLEEGVRAGTIKPSRDPRARAKYLGITGGGGLLLYLQMHDNPTDLRAVLRDYSRDMIL 183
Query 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEAH 210
P+LE+YTEGL+ADR MY+AFLA QG++H
Sbjct 184 PALEIYTEGLMADRTMYDAFLAAEDQGDSH 213
>gi|254774239|ref|ZP_05215755.1| transcriptional regulator, TetR family protein [Mycobacterium
avium subsp. avium ATCC 25291]
Length=212
Score = 304 bits (778), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 161/210 (77%), Positives = 189/210 (90%), Gaps = 0/210 (0%)
Query 1 MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60
MRSADLTA ARIR+AAIEQFG HGFGVGLR IAEAAGVSAALVIHHFGSKEGLRKACDD
Sbjct 1 MRSADLTAAARIRDAAIEQFGEHGFGVGLRRIAEAAGVSAALVIHHFGSKEGLRKACDDH 60
Query 61 VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120
+AE+IR SK AL++NDP W Q+AEIE +APL+AY++RSMQ+GG+LAKMLW++MI+NA
Sbjct 61 IAEQIRESKTEALQTNDPAVWFGQLAEIEEFAPLIAYVLRSMQTGGDLAKMLWRQMIENA 120
Query 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180
E YL+EGVRAGT+KPSRDPRARA++L ITGGGG LLYLQMH+NPTDLRA LRDY+ DM+L
Sbjct 121 EGYLEEGVRAGTIKPSRDPRARAKYLGITGGGGLLLYLQMHDNPTDLRAVLRDYSRDMIL 180
Query 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEAH 210
P+LE+YTEGL+ADR MY+AFLA QG++H
Sbjct 181 PALEIYTEGLMADRTMYDAFLAAEDQGDSH 210
>gi|41408657|ref|NP_961493.1| hypothetical protein MAP2559 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41397015|gb|AAS04876.1| hypothetical protein MAP_2559 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=267
Score = 301 bits (772), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 160/209 (77%), Positives = 188/209 (90%), Gaps = 0/209 (0%)
Query 1 MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60
MRSADLTA ARIR+AAIEQFG HGFGVGLR IAEAAGVSAALVIHHFGSKEGLRKACDD
Sbjct 1 MRSADLTAAARIRDAAIEQFGEHGFGVGLRRIAEAAGVSAALVIHHFGSKEGLRKACDDH 60
Query 61 VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120
+AE+IR SK AL++NDP W Q+AEIE +APL+AY++RSMQ+GG+LAKMLW++MI+NA
Sbjct 61 IAEQIRESKTEALQTNDPAVWFGQLAEIEEFAPLIAYVLRSMQTGGDLAKMLWRQMIENA 120
Query 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180
E YL+EGVRAGT+KPSRDPRARA++L ITGGGG LLYLQMH+NPTDLRA LRDY+ DM+L
Sbjct 121 EGYLEEGVRAGTIKPSRDPRARAKYLGITGGGGLLLYLQMHDNPTDLRAVLRDYSRDMIL 180
Query 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEA 209
P+LE+YTEGL+ADR MY+AFLA QG++
Sbjct 181 PALEIYTEGLMADRTMYDAFLAAEDQGDS 209
>gi|336458554|gb|EGO37521.1| transcriptional regulator, tetR family [Mycobacterium avium subsp.
paratuberculosis S397]
Length=206
Score = 298 bits (763), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/206 (78%), Positives = 185/206 (90%), Gaps = 0/206 (0%)
Query 1 MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60
MRSADLTA ARIR+AAIEQFG HGFGVGLR IAEAAGVSAALVIHHFGSKEGLRKACDD
Sbjct 1 MRSADLTAAARIRDAAIEQFGEHGFGVGLRRIAEAAGVSAALVIHHFGSKEGLRKACDDH 60
Query 61 VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120
+AE+IR SK AL++NDP W Q+AEIE +APL+AY++RSMQ+GG+LAKMLW++MI+NA
Sbjct 61 IAEQIRESKTEALQTNDPAVWFGQLAEIEEFAPLIAYVLRSMQTGGDLAKMLWRQMIENA 120
Query 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180
E YL+EGVRAGT+KPSRDPRARA++L ITGGGG LLYLQMH+NPTDLRA LRDY+ DM+L
Sbjct 121 EGYLEEGVRAGTIKPSRDPRARAKYLGITGGGGLLLYLQMHDNPTDLRAVLRDYSRDMIL 180
Query 181 PSLEVYTEGLLADRAMYEAFLAEAQQ 206
P+LE+YTEGL+ADR MY+AFLA Q
Sbjct 181 PALEIYTEGLMADRTMYDAFLAAEDQ 206
>gi|315443254|ref|YP_004076133.1| TetR family transcriptional regulator [Mycobacterium sp. Spyr1]
gi|315261557|gb|ADT98298.1| transcriptional regulator, TetR family [Mycobacterium sp. Spyr1]
Length=222
Score = 292 bits (748), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 138/208 (67%), Positives = 174/208 (84%), Gaps = 2/208 (0%)
Query 1 MRSA-DLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDD 59
MRS DLTA ARIR+AA++ FGR GF V +RAIA AAGVS LVIHHFGSKEGLRKACD
Sbjct 1 MRSVGDLTAAARIRDAAVDLFGREGFTVSVRAIATAAGVSPGLVIHHFGSKEGLRKACDA 60
Query 60 FVAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDN 119
+VAE +R++K+ +++++DP TWLAQMAEIE YA LMAYLVRS+Q+GGEL KMLW+ M DN
Sbjct 61 YVAETVRANKSESIQTSDPATWLAQMAEIEEYASLMAYLVRSLQAGGELGKMLWRTMTDN 120
Query 120 AEEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMV 179
E+YL++GVRAGTVKPS DP+ARA FL++ GGGFLLYLQ+H++ TD+R LRDY+ +V
Sbjct 121 VEQYLEDGVRAGTVKPSADPKARALFLSMASGGGFLLYLQLHDS-TDIRVVLRDYSEAVV 179
Query 180 LPSLEVYTEGLLADRAMYEAFLAEAQQG 207
LP+LE+YT+GL+ D MY+AFLA+ +G
Sbjct 180 LPALELYTQGLMTDPTMYDAFLAQRNKG 207
>gi|145222786|ref|YP_001133464.1| TetR family transcriptional regulator [Mycobacterium gilvum PYR-GCK]
gi|145215272|gb|ABP44676.1| transcriptional regulator, TetR family [Mycobacterium gilvum
PYR-GCK]
Length=218
Score = 285 bits (728), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/204 (67%), Positives = 168/204 (83%), Gaps = 2/204 (0%)
Query 1 MRSAD-LTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDD 59
MRS D LTA ARIR+AA+E FG GF V +R IA AAGVS LVIHHFGSK+ L KACD
Sbjct 1 MRSVDDLTAAARIRDAAVELFGAEGFAVSVRTIAAAAGVSPGLVIHHFGSKDQLHKACDA 60
Query 60 FVAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDN 119
+VAE +R++K+ +++++DP TWLAQMAEIE YAPLMAYLVRS+Q+GGEL KMLW+ M ++
Sbjct 61 YVAETVRAAKSESIQTSDPATWLAQMAEIEEYAPLMAYLVRSLQAGGELGKMLWRTMTND 120
Query 120 AEEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMV 179
E+YL++GVRAGTVKPS DPRARA FL++ GGGFLLYLQ+HE+ TD+R LRDY+ MV
Sbjct 121 VEQYLEDGVRAGTVKPSADPRARAFFLSMASGGGFLLYLQLHES-TDIRVVLRDYSEAMV 179
Query 180 LPSLEVYTEGLLADRAMYEAFLAE 203
LP+LE+YT GLL D MY+AF+AE
Sbjct 180 LPALELYTHGLLTDSTMYDAFVAE 203
>gi|120402407|ref|YP_952236.1| TetR family transcriptional regulator [Mycobacterium vanbaalenii
PYR-1]
gi|119955225|gb|ABM12230.1| transcriptional regulator, TetR family [Mycobacterium vanbaalenii
PYR-1]
Length=247
Score = 226 bits (577), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/204 (58%), Positives = 147/204 (73%), Gaps = 3/204 (1%)
Query 10 ARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAEEIRSSK 69
A+IR+AAI + G GF +RAIA AAG+SA +VI +GSK L KACDD V E IR+SK
Sbjct 22 AQIRDAAIAKIGAQGFRTPIRAIAAAAGLSADVVIDLYGSKRNLLKACDDHVVETIRTSK 81
Query 70 AAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAEEYLDEGVR 129
+ AL+S DP TW A +A IESYAPLMAYLVRS++ G LA L +MI+N +YLD+GVR
Sbjct 82 SQALQSRDPATWRAALAGIESYAPLMAYLVRSIEDGQSLADGLLDRMIENVIDYLDDGVR 141
Query 130 AGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVLPSLEVYTEG 189
AGTVKPSR+PRARA+FLA++ GGFLLY H P D+ A LRDYA DM+ P+LE+Y+ G
Sbjct 142 AGTVKPSRNPRARAKFLALSNAGGFLLYRHRHPTPRDMAAVLRDYAADMIEPALELYSSG 201
Query 190 LLADRAMYEAF---LAEAQQGEAH 210
L+AD M +A LA + G H
Sbjct 202 LMADTTMLDALAEPLARQRNGAHH 225
>gi|111019947|ref|YP_702919.1| TetR family transcriptional regulator [Rhodococcus jostii RHA1]
gi|110819477|gb|ABG94761.1| possible transcriptional regulator, TetR family protein [Rhodococcus
jostii RHA1]
Length=234
Score = 224 bits (572), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 112/201 (56%), Positives = 142/201 (71%), Gaps = 3/201 (1%)
Query 5 DLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAEE 64
DLT AR+R+AAI FG HGF G+RAIA AAGVS LVIHHFGSK+GLR CD+ V
Sbjct 14 DLTTRARVRDAAITVFGNHGFSTGVRAIATAAGVSPGLVIHHFGSKDGLRAECDEHVLRI 73
Query 65 IRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAEEYL 124
IR KA A+ + P + +AEIE YAPL+AY+VRS Q+GG L + L++ M+++ E+YL
Sbjct 74 IREQKAEAISTPGPAGAMHALAEIEQYAPLVAYIVRSFQAGGGLGESLFEHMVEDTEQYL 133
Query 125 DEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMH---ENPTDLRAALRDYAHDMVLP 181
GV AGTV+PSR+P+ARAR+L + G LLYLQM E P D A+RD A D+ LP
Sbjct 134 AMGVAAGTVRPSRNPKARARYLTLYNVGAMLLYLQMRADKETPLDYATAIRDLATDVTLP 193
Query 182 SLEVYTEGLLADRAMYEAFLA 202
+LE+YTEGLL D + EA+LA
Sbjct 194 ALEMYTEGLLPDSSTLEAYLA 214
>gi|226362093|ref|YP_002779871.1| TetR family transcriptional regulator [Rhodococcus opacus B4]
gi|226240578|dbj|BAH50926.1| putative TetR family transcriptional regulator [Rhodococcus opacus
B4]
Length=234
Score = 221 bits (563), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 110/201 (55%), Positives = 142/201 (71%), Gaps = 3/201 (1%)
Query 5 DLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAEE 64
D+T AR+R+AAI FG HGFG G+RAIA AAGVS LVIHHFGSK+GLR CD+ V
Sbjct 14 DMTTRARVRDAAITVFGNHGFGTGVRAIATAAGVSPGLVIHHFGSKDGLRAECDEHVLRI 73
Query 65 IRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAEEYL 124
IR KA A+ + P + +A+IE YAPL+AY+VRS Q+GG L + L++ M+++ E+YL
Sbjct 74 IREQKAEAISTPGPAGAMQALADIEQYAPLVAYIVRSFQAGGGLGESLFEHMVEDTEQYL 133
Query 125 DEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMH---ENPTDLRAALRDYAHDMVLP 181
GV AG V+PSR+P+ARAR+L + G LLYLQM E P D A+RD A D+ LP
Sbjct 134 ALGVAAGRVRPSRNPKARARYLTLYNVGAMLLYLQMRADKEAPLDYATAIRDLATDVTLP 193
Query 182 SLEVYTEGLLADRAMYEAFLA 202
+LE+YTEGLL D + EA+LA
Sbjct 194 ALEMYTEGLLPDSSTLEAYLA 214
>gi|169628451|ref|YP_001702100.1| TetR family transcriptional regulator [Mycobacterium abscessus
ATCC 19977]
gi|169240418|emb|CAM61446.1| Probable transcriptional regulator, TetR family [Mycobacterium
abscessus]
Length=214
Score = 215 bits (547), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/211 (54%), Positives = 157/211 (75%), Gaps = 4/211 (1%)
Query 1 MRSAD-LTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDD 59
MRSAD LTA ARIR+AAI+ +G G G +RAIA+AAGVS ALVIHH+GSK+GLR+A DD
Sbjct 1 MRSADDLTAAARIRDAAIKLWGEQGNGASVRAIADAAGVSPALVIHHYGSKDGLRQAVDD 60
Query 60 FVAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDN 119
++ IRS K+ + SNDP WL + EIE++AP++ YL+ S+QSGGE + ++ ID+
Sbjct 61 YLLAYIRSEKSRTITSNDPQVWLDAIDEIETFAPMVRYLLHSVQSGGEPGRAFLRRSIDD 120
Query 120 AEEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMV 179
AE+YL++GVRAGT+KPSRDP+ RA ++++ G ++Y+QMH N DLR LR YA +++
Sbjct 121 AEQYLEDGVRAGTIKPSRDPKGRALWVSLNSVGSLIIYVQMHAN-EDLREILRRYADELI 179
Query 180 LPSLEVYTEGLLADRAMYEAFLAEAQQGEAH 210
P++EVYTEGL+ D M +AF QQ ++H
Sbjct 180 FPAIEVYTEGLMTDSTMLDAF--AVQQDKSH 208
>gi|312137603|ref|YP_004004939.1| tetr family transcriptional regulator [Rhodococcus equi 103S]
gi|311886942|emb|CBH46251.1| putative TetR family transcriptional regulator [Rhodococcus equi
103S]
Length=216
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/207 (50%), Positives = 133/207 (65%), Gaps = 3/207 (1%)
Query 5 DLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAEE 64
DL ARIR+AAI FG GF G+RA+A AAGVS LV HHFGSK+GLR CD V +
Sbjct 8 DLNTRARIRDAAIRVFGAQGFDAGVRAVATAAGVSPGLVNHHFGSKQGLRAVCDAHVLDV 67
Query 65 IRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAEEYL 124
I + K L ++ P LA + EIE YAPL+AYLVRS Q+GG LA L++ M+ E YL
Sbjct 68 IVTEKREVLTASGPARMLAALGEIERYAPLVAYLVRSFQAGGHLAASLFEHMVAGVESYL 127
Query 125 DEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENP---TDLRAALRDYAHDMVLP 181
+ V G V+PSR P ARAR+LA+ G LLYLQMH P D+ A+R+ +++LP
Sbjct 128 EAAVDEGRVRPSRTPTARARYLAMNSLGSTLLYLQMHTAPDGSVDVAGAIREMTDEIMLP 187
Query 182 SLEVYTEGLLADRAMYEAFLAEAQQGE 208
+LE+YT+GL D +M +A+ A E
Sbjct 188 ALELYTDGLFTDSSMLDAYTHHATSEE 214
>gi|325677425|ref|ZP_08157089.1| TetR family transcriptional regulator [Rhodococcus equi ATCC
33707]
gi|325551672|gb|EGD21370.1| TetR family transcriptional regulator [Rhodococcus equi ATCC
33707]
Length=216
Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 103/207 (50%), Positives = 133/207 (65%), Gaps = 3/207 (1%)
Query 5 DLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAEE 64
DL ARIR+AAI FG GF G+RA+A AAGVS LV HHFGSK+GLR CD V +
Sbjct 8 DLNTRARIRDAAIRVFGAQGFDAGVRAVATAAGVSPGLVNHHFGSKQGLRAVCDAHVLDV 67
Query 65 IRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAEEYL 124
I + K L ++ P LA + EIE YAPL+AYLVRS Q+GG LA L++ M+ E YL
Sbjct 68 IVTEKREVLTASGPARMLAALGEIERYAPLVAYLVRSFQAGGHLAASLFEHMVAGVEGYL 127
Query 125 DEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENP---TDLRAALRDYAHDMVLP 181
+ V G V+PSR P ARAR+LA+ G LLYLQMH P D+ A+R+ +++LP
Sbjct 128 EAAVDEGRVRPSRTPTARARYLAMNSLGSTLLYLQMHTAPDGSVDVAGAIREMTDEIMLP 187
Query 182 SLEVYTEGLLADRAMYEAFLAEAQQGE 208
+LE+YT+GL D +M +A+ A E
Sbjct 188 ALELYTDGLFTDSSMLDAYTHHATSEE 214
>gi|54024447|ref|YP_118689.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
gi|54015955|dbj|BAD57325.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
Length=217
Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 101/204 (50%), Positives = 139/204 (69%), Gaps = 4/204 (1%)
Query 4 ADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAE 63
A+LT ARIR+AAIE FG GF VG+R IA AAGVS LV HHFGSK+GLR ACD+ V +
Sbjct 13 AELTTAARIRDAAIEVFGDRGFDVGVRVIAAAAGVSPGLVNHHFGSKDGLRAACDERVLQ 72
Query 64 EIRSSKAAALKSNDPTT-WLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAEE 122
I K AL + D LA MAE+E+Y PL+AY+VRS+++GG +A+ L++ M+ +AE+
Sbjct 73 LIHDEKTKALLAPDTGAGLLAAMAEVEAYGPLVAYMVRSLEAGGPMAESLFEHMVADAED 132
Query 123 YLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHE---NPTDLRAALRDYAHDMV 179
Y+ GV AG +KPSRDP+ARAR L + G LL++++H+ D RAA+R ++
Sbjct 133 YMRRGVEAGVIKPSRDPKARARHLMLANVGATLLWVRLHQRDGETIDFRAAIRRITEELT 192
Query 180 LPSLEVYTEGLLADRAMYEAFLAE 203
P+LE+YT+GLL D + + E
Sbjct 193 GPALELYTQGLLTDPTLLDEITKE 216
>gi|296131369|ref|YP_003638619.1| TetR family transcriptional regulator [Cellulomonas flavigena
DSM 20109]
gi|296023184|gb|ADG76420.1| transcriptional regulator, TetR family [Cellulomonas flavigena
DSM 20109]
Length=224
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/199 (48%), Positives = 135/199 (68%), Gaps = 2/199 (1%)
Query 5 DLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAEE 64
DLT ARIR+AA+ ++ R GFG LRA+AE AGVSAAL++HHFGSK+GLR+ CD +V
Sbjct 10 DLTTRARIRDAAVARYAREGFGAPLRAVAEDAGVSAALIVHHFGSKDGLRQVCDAYVLAT 69
Query 65 IRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAEEYL 124
IR SK A+ S L Q+A ++ YAPL+ Y +RS+Q+GG +A+ + + +AE YL
Sbjct 70 IRESKERAIASGTTQEVLLQLASLDEYAPLVGYALRSLQAGGAMARDFVEHFVADAEVYL 129
Query 125 DEGVRAGTVKPSRDPRARARFLAITGGGGFLL--YLQMHENPTDLRAALRDYAHDMVLPS 182
E V G ++PSRD +ARAR+L + G G LL L + ++PTD+ A L Y M+LP+
Sbjct 130 AEAVATGQMRPSRDEKARARYLTVQGLGTLLLDMTLNVPDDPTDVLAMLHGYRDRMMLPA 189
Query 183 LEVYTEGLLADRAMYEAFL 201
+E++T GL+ D M +A+L
Sbjct 190 VELFTHGLMTDNTMLDAYL 208
>gi|330467454|ref|YP_004405197.1| TetR family transcriptional regulator [Verrucosispora maris AB-18-032]
gi|328810425|gb|AEB44597.1| TetR family transcriptional regulator [Verrucosispora maris AB-18-032]
Length=230
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 127/194 (66%), Gaps = 3/194 (1%)
Query 11 RIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAEEIRSSKA 70
RIR+AAI +F R GF VGLRA+A AGV+A L++HHFGSK+GLR+ACD V +R KA
Sbjct 20 RIRDAAIARFARDGFRVGLRALAADAGVTAGLIVHHFGSKDGLRRACDSHVLAVMREQKA 79
Query 71 AALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAEEYLDEGVRA 130
L T LAQ+AE+E YAPL+ YL+RS+Q+GGELA L + M+ +AE YL G A
Sbjct 80 KVLTDGTGATLLAQLAEVEQYAPLVRYLLRSLQAGGELAATLIEAMVADAEAYLSAGESA 139
Query 131 GTVKPSRDPRARARFLAITGGGGFLLYLQMH---ENPTDLRAALRDYAHDMVLPSLEVYT 187
G +KPSRD AR R+LA G +L+ +H P + R Y D LP+LE++
Sbjct 140 GVIKPSRDGAARTRYLAYQATGSMVLWFTLHGADAAPEEFAHLFRRYMDDFALPALELFA 199
Query 188 EGLLADRAMYEAFL 201
EGLL DR+M + +L
Sbjct 200 EGLLTDRSMLDEYL 213
>gi|317509100|ref|ZP_07966729.1| tetR family bacterial regulatory protein [Segniliparus rugosus
ATCC BAA-974]
gi|316252629|gb|EFV12070.1| tetR family bacterial regulatory protein [Segniliparus rugosus
ATCC BAA-974]
Length=233
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/211 (50%), Positives = 140/211 (67%), Gaps = 6/211 (2%)
Query 2 RSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFV 61
R DL A ARIR+AAIE GR GFGV +RAIAE+AG SA LVIHHFGSK GLR ACD+ V
Sbjct 11 RGGDLNARARIRDAAIELVGRKGFGVSVRAIAESAGFSAGLVIHHFGSKAGLRAACDEEV 70
Query 62 AEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAE 121
R +K A+++ AQ A++ +AP+ AYL+RS+ GG LA+ + ++ + E
Sbjct 71 LRRYREAKTDAMQTGIGGGAFAQFAQVREHAPIAAYLLRSVIEGGPLAEEIIERFAEETE 130
Query 122 EYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQ-MHENPTDL-----RAALRDYA 175
+ L+ GV +G ++PSRDP+ARAR+LAI GG LL L+ + + DL AL YA
Sbjct 131 QILEAGVASGKIRPSRDPKARARYLAIESLGGMLLRLRPVLDGEGDLGDGRFADALVRYA 190
Query 176 HDMVLPSLEVYTEGLLADRAMYEAFLAEAQQ 206
++ LP+LEV+T+GL+ADR+ AFLA Q
Sbjct 191 AEITLPALEVFTDGLIADRSFLNAFLAHEQD 221
>gi|297562603|ref|YP_003681577.1| TetR family transcriptional regulator [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296847051|gb|ADH69071.1| transcriptional regulator, TetR family [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length=230
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 102/200 (51%), Positives = 138/200 (69%), Gaps = 2/200 (1%)
Query 4 ADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAE 63
+DLTA ARIR+AAI FG+ GFGV +RAIAE AGVS LVIHHFGSK+ LR+ACDD V
Sbjct 20 SDLTARARIRDAAIACFGQRGFGVSVRAIAEQAGVSPGLVIHHFGSKDKLRRACDDHVTA 79
Query 64 EIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAEEY 123
+ K + S+D T+L Q+A +E YAPL+AY+VRSMQ+GG LA L+++M+ + E Y
Sbjct 80 AVNEVKTDTVTSHDGQTFLHQLATMEQYAPLLAYVVRSMQAGGPLAAALFERMVADIEVY 139
Query 124 LDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHE--NPTDLRAALRDYAHDMVLP 181
L G GT++PSRDP RAR+LA G LL+L + D R+++ + +LP
Sbjct 140 LAAGEAEGTIRPSRDPARRARYLAANSLGSLLLFLTLGRFGEEVDFARVAREWSREYMLP 199
Query 182 SLEVYTEGLLADRAMYEAFL 201
+LE+YTEGLL +R + +A+L
Sbjct 200 TLELYTEGLLTERTILDAYL 219
>gi|284028457|ref|YP_003378388.1| TetR family transcriptional regulator [Kribbella flavida DSM
17836]
gi|283807750|gb|ADB29589.1| transcriptional regulator, TetR family [Kribbella flavida DSM
17836]
Length=223
Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 96/201 (48%), Positives = 134/201 (67%), Gaps = 2/201 (0%)
Query 3 SADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVA 62
SA+ + RIR+AAI +FGR GF GLR IA AGV+A LV+HHFGSK GLR+ACD+ V
Sbjct 10 SAEAASVERIRDAAIVRFGRDGFSAGLRVIAADAGVTAGLVVHHFGSKGGLRQACDEHVL 69
Query 63 EEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAEE 122
IR+ K A + +AQ+AE+E +AP+ Y VRS+Q+GG LA ++M+ +AE+
Sbjct 70 SVIRAEKLKAATTGSAAGMIAQLAEVEQFAPMALYAVRSLQTGGRLATEFVEQMVRDAEQ 129
Query 123 YLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPT--DLRAALRDYAHDMVL 180
YL GV AG +KPSRDP ARAR+LA G LL+ + + D AALR+ + ++
Sbjct 130 YLAAGVEAGVIKPSRDPAARARYLAYQSLGSLLLWATIRSDALTGDFAAALRELSDEVTP 189
Query 181 PSLEVYTEGLLADRAMYEAFL 201
P+LE++T+GL DR+M + +L
Sbjct 190 PALELFTQGLFVDRSMLDDYL 210
>gi|332671999|ref|YP_004455007.1| regulatory protein TetR [Cellulomonas fimi ATCC 484]
gi|332341037|gb|AEE47620.1| regulatory protein TetR [Cellulomonas fimi ATCC 484]
Length=220
Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/211 (48%), Positives = 136/211 (65%), Gaps = 10/211 (4%)
Query 1 MRSA--DLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACD 58
+RSA DLTA ARIR+AA+ +FGR GFGVGLR IA AGVS ALVIHHFGSK+GLR ACD
Sbjct 4 VRSAVDDLTARARIRDAAVARFGRDGFGVGLRVIAADAGVSPALVIHHFGSKDGLRTACD 63
Query 59 DFVAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMID 118
+ V I K +A+ + P+ +A++A +E YA + AY+VR + GG +A +++
Sbjct 64 EHVLARILEEKKSAIGAAAPSEVIAKLATLEQYATVFAYVVRCLLEGGSVAAHFIDGLVE 123
Query 119 NAEEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMH------ENPTDL-RAAL 171
+AE YL + V +G+V PSRDP RAR L I G L+ Q PT+ AA+
Sbjct 124 DAETYLADAVASGSVLPSRDPAGRARVL-IAMSVGSLVMAQADAAAGRGPAPTEQPAAAM 182
Query 172 RDYAHDMVLPSLEVYTEGLLADRAMYEAFLA 202
+ ++L SLE+YT+GL ADR+ +A+LA
Sbjct 183 EELYRRIMLGSLELYTQGLFADRSYLDAYLA 213
>gi|334335762|ref|YP_004540914.1| regulatory protein TetR [Isoptericola variabilis 225]
gi|334106130|gb|AEG43020.1| regulatory protein TetR [Isoptericola variabilis 225]
Length=230
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/204 (45%), Positives = 124/204 (61%), Gaps = 3/204 (1%)
Query 1 MRSAD-LTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDD 59
+RSAD LT ARIR+AA+ +F R GF +R IA AGVS ALVIHHFGSK L CD+
Sbjct 3 VRSADDLTTRARIRDAAVLRFARSGFDATVRDIAADAGVSPALVIHHFGSKAKLHAVCDE 62
Query 60 FVAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDN 119
V I SK + + + E E +APL+ Y++RS+Q+GGE+A MI++
Sbjct 63 HVLAWIAESKRKNMGPATSGRLMEVLTEAEEFAPLLGYVLRSLQAGGEVAAAFVNHMIED 122
Query 120 AEEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMH--ENPTDLRAALRDYAHD 177
AE+Y E VRAG VKPS D R RFL ++ G LL L + ++P DL+ LR + D
Sbjct 123 AEKYTAEAVRAGIVKPSLDEAKRVRFLVLSSLGSMLLALTLDPPQDPADLQGTLRRFLKD 182
Query 178 MVLPSLEVYTEGLLADRAMYEAFL 201
LP +E++T+G L +R M + +L
Sbjct 183 QYLPQVELFTQGFLTNRRMLDDYL 206
>gi|326328614|ref|ZP_08194954.1| transcriptional regulator, TetR family [Nocardioidaceae bacterium
Broad-1]
gi|325953575|gb|EGD45575.1| transcriptional regulator, TetR family [Nocardioidaceae bacterium
Broad-1]
Length=223
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/206 (42%), Positives = 126/206 (62%), Gaps = 5/206 (2%)
Query 1 MRSA--DLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACD 58
MRSA D T RIR+AA+ +F R GFG +R+IA AGVS ALVIHHFGSK+ L CD
Sbjct 1 MRSAPADPTTRERIRDAAVLRFARDGFGASVRSIATDAGVSPALVIHHFGSKDELHAECD 60
Query 59 DFVAEEIRSSKAAALKS-NDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMI 117
+ V EIR +K + + L + A + YAP++ Y++RS+Q GG + + ++MI
Sbjct 61 EAVLAEIRGAKNETIDELASSQSILHRFAAADEYAPMLGYVLRSLQDGGPVGRTFIEQMI 120
Query 118 DNAEEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMH--ENPTDLRAALRDYA 175
++A Y G+ AG VKPSRD ARAR+L ++ G +L + ++ E+P+D+ +R +
Sbjct 121 EDAVGYTKHGIEAGLVKPSRDEAARARYLVLSALGTLMLEITLNPPEDPSDISGLVRGFL 180
Query 176 HDMVLPSLEVYTEGLLADRAMYEAFL 201
LP +E+Y+EG R M + +L
Sbjct 181 ATTYLPMIELYSEGFFTTRRMLDEYL 206
>gi|229819037|ref|YP_002880563.1| TetR family transcriptional regulator [Beutenbergia cavernae
DSM 12333]
gi|229564950|gb|ACQ78801.1| transcriptional regulator, TetR family [Beutenbergia cavernae
DSM 12333]
Length=254
Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/200 (45%), Positives = 122/200 (61%), Gaps = 2/200 (1%)
Query 4 ADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAE 63
+DLTA ARIR+ AI FG HGFGVGLRAIA+ AGVS LV HHFGSK+GLR+ACD V
Sbjct 20 SDLTARARIRDGAIRLFGEHGFGVGLRAIAQEAGVSVGLVAHHFGSKDGLREACDAHVLS 79
Query 64 EIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAEEY 123
+ ++ AA S + Q+A + +APL+AY+ RS+Q+GG+LA+ + +A +
Sbjct 80 ALNEARRAADVSGPSGAMITQLAAVAEFAPLVAYVFRSVQAGGQLARDFVEHAAADAAAF 139
Query 124 LDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMH-ENPTD-LRAALRDYAHDMVLP 181
L+ +G V+PSRD ARAR L G L L + P + + A+ Y P
Sbjct 140 LERSAASGLVRPSRDEVARARALTSQSIGSLALELALDPPGPGESMSEAIERYVERYTAP 199
Query 182 SLEVYTEGLLADRAMYEAFL 201
LE+YT+GL D +M +A+L
Sbjct 200 LLELYTDGLFTDSSMLDAYL 219
>gi|258651981|ref|YP_003201137.1| TetR family transcriptional regulator [Nakamurella multipartita
DSM 44233]
gi|258555206|gb|ACV78148.1| transcriptional regulator, TetR family [Nakamurella multipartita
DSM 44233]
Length=232
Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/202 (42%), Positives = 124/202 (62%), Gaps = 5/202 (2%)
Query 3 SADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVA 62
+ADLTA A++R+AAI F GF R IA AGVS L+ HHFGSKE LR CD V
Sbjct 12 AADLTARAKVRDAAIAAFAEQGFDASFRVIAARAGVSPGLITHHFGSKEQLRAECDAEVL 71
Query 63 EEIRSSKAAALKSNDPTTWLAQ-MAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAE 121
+ R+ K++++ +P+ +L Q +AE A L Y++R++ +GG A+ + +ID A
Sbjct 72 RQYRALKSSSIA--NPSGYLFQHLAEPGPAAQLTVYMLRAIHAGGRPAQDFLEHLIDGAR 129
Query 122 EYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLL-YLQMHE-NPTDLRAALRDYAHDMV 179
E + V AG V+PSRD AR R+LA G L+ +L M + +P ++R+ + +
Sbjct 130 EVMAASVAAGLVRPSRDEEARTRYLAFQTMGAMLIQFLTMPDPSPEAFVESIRNSRQNQI 189
Query 180 LPSLEVYTEGLLADRAMYEAFL 201
LP+LE++T+GLL DR+M E +L
Sbjct 190 LPTLELFTDGLLVDRSMLEDYL 211
>gi|257068815|ref|YP_003155070.1| transcriptional regulator, tetR family [Brachybacterium faecium
DSM 4810]
gi|256559633|gb|ACU85480.1| transcriptional regulator, tetR family [Brachybacterium faecium
DSM 4810]
Length=219
Score = 141 bits (355), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/205 (41%), Positives = 117/205 (58%), Gaps = 4/205 (1%)
Query 8 AHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAEEIRS 67
A RI AA+++F G LRA+A+ AGVSA L+IHH+GS+E L +ACD + R
Sbjct 7 ADERILRAALQRFAVEGLRAPLRAVAQDAGVSAGLIIHHYGSREKLLEACDRRALQITRE 66
Query 68 SKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAEEYLDEG 127
+K L LAQ+AEI +AP++ Y++R +Q+GG LA+ L + +A YL EG
Sbjct 67 NKREVLTGGS-AAMLAQLAEIARFAPVVGYVLRRLQAGGPLAQQLVGDFVADALVYLAEG 125
Query 128 VRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAA---LRDYAHDMVLPSLE 184
AG + SRDP ARAR L G +L + + DL LR + +V P LE
Sbjct 126 EAAGLISTSRDPEARARVLTEMALGALVLQMPSQRDRLDLVGLPTWLRSFTDSLVAPVLE 185
Query 185 VYTEGLLADRAMYEAFLAEAQQGEA 209
+YT LL D ++ +A+LA A G+A
Sbjct 186 LYTTPLLTDASLLDAYLAAAPPGDA 210
>gi|229822234|ref|YP_002883760.1| TetR family transcriptional regulator [Beutenbergia cavernae
DSM 12333]
gi|229568147|gb|ACQ81998.1| transcriptional regulator, TetR family [Beutenbergia cavernae
DSM 12333]
Length=252
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/209 (40%), Positives = 118/209 (57%), Gaps = 3/209 (1%)
Query 1 MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60
+R DLTA ARIR+AAIE F R GF +R +A+ AGVSA L+ HHFGSK LR CD
Sbjct 21 VRPEDLTARARIRDAAIECFARDGFDASVRTLADRAGVSAGLITHHFGSKAKLRAECDTE 80
Query 61 VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120
V R K A++ P L +A+ A L+ Y++R++ +GG A+ ++D+A
Sbjct 81 VLRRYRLVKQDAVERPTP-HLLEALADPGPDAALLVYILRAVHAGGPAARAFLTHLMDDA 139
Query 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMH--ENPTDLRAALRDYAHDM 178
+ + +GV G V+PSRD AR R+L G L+ + +P A +R + D+
Sbjct 140 RDAMADGVARGLVRPSRDEEARLRYLTYQTVGAMLVDFMLDGGSDPGVFVARMRQRSSDL 199
Query 179 VLPSLEVYTEGLLADRAMYEAFLAEAQQG 207
+LP LEV TEG LA R +++L +G
Sbjct 200 LLPMLEVGTEGYLASREYLDSYLENVWEG 228
>gi|269954953|ref|YP_003324742.1| TetR family transcriptional regulator [Xylanimonas cellulosilytica
DSM 15894]
gi|269303634|gb|ACZ29184.1| transcriptional regulator, TetR family [Xylanimonas cellulosilytica
DSM 15894]
Length=233
Score = 137 bits (346), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/208 (40%), Positives = 114/208 (55%), Gaps = 17/208 (8%)
Query 1 MRSAD-LTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDD 59
MRS + L+ +RIR+AA+ +F R GF V LR IA AGVS ALVIHHFGSK+GLR ACD+
Sbjct 1 MRSVEELSTRSRIRDAAVSRFARDGFRVPLRVIAADAGVSPALVIHHFGSKDGLRAACDE 60
Query 60 FVAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDN 119
V E K+ +++ DP + + + + +AYL+R++ GGE A+ + ++ +
Sbjct 61 HVLEHSLMLKSGVVENTDPALLRSLLGNLRVFDEPVAYLLRALLDGGEAARSILERTVAA 120
Query 120 AEEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALR------- 172
E YL+ GV +G ++PSRDP RAR+L G LL P
Sbjct 121 VETYLEAGVASGVIRPSRDPAGRARYLTYMSLG--LLVTAFLAGPRTDGDDDDGAASDEG 178
Query 173 -DYAH------DMVLPSLEVYTEGLLAD 193
Y H + LP LEV T GL+AD
Sbjct 179 DPYGHVTELLASLTLPHLEVMTHGLIAD 206
>gi|296271153|ref|YP_003653785.1| TetR family transcriptional regulator [Thermobispora bispora
DSM 43833]
gi|296093940|gb|ADG89892.1| transcriptional regulator, TetR family [Thermobispora bispora
DSM 43833]
Length=237
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/154 (39%), Positives = 87/154 (57%), Gaps = 1/154 (0%)
Query 5 DLTAHARIREAAIEQFGRHGFG-VGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAE 63
D TA ARIR+AAI +F G L+ IA AGVS LVIHHFGSKEGLR ACD ++A
Sbjct 17 DRTARARIRDAAIARFAAQGVAATNLKDIAADAGVSTPLVIHHFGSKEGLRAACDQYIAS 76
Query 64 EIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAEEY 123
IR K A++ + + + P++AYL R++ G L +M++++ Y
Sbjct 77 WIRERKTASMTAGKDLDPFLALRDALDGTPVIAYLARTIADGSPHVDQLIDEMVEDSLTY 136
Query 124 LDEGVRAGTVKPSRDPRARARFLAITGGGGFLLY 157
L EGV G +KP+ + R +A + + G +L+
Sbjct 137 LAEGVEKGLIKPAENLREQASLICVWLLGALVLH 170
>gi|159038733|ref|YP_001537986.1| TetR family transcriptional regulator [Salinispora arenicola
CNS-205]
gi|157917568|gb|ABV98995.1| transcriptional regulator, TetR family [Salinispora arenicola
CNS-205]
Length=211
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/157 (39%), Positives = 90/157 (58%), Gaps = 2/157 (1%)
Query 2 RSADLTAHARIREAAIEQFGRHGFG-VGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60
R + + +RIR+AAI F +G G+RAIA AAGV +L+IH+FG+K+ LR ACD +
Sbjct 17 RVDNASTKSRIRDAAITLFAENGVAATGVRAIASAAGVHPSLIIHYFGTKDALRVACDKY 76
Query 61 VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120
VA +R K ++S A + ++ PLM YL R++ G L +M+++A
Sbjct 77 VAGFVREYKHKVMRSGMKFD-AADLRDLRDGPPLMRYLARTLADGSPHTAALVDEMVNDA 135
Query 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLY 157
EYL EGV +G V+P+ P RA LA+ G L+
Sbjct 136 VEYLSEGVASGLVRPTDHPYERAAILAVWSLGALALH 172
>gi|145595486|ref|YP_001159783.1| regulatory protein TetR [Salinispora tropica CNB-440]
gi|145304823|gb|ABP55405.1| regulatory protein, TetR [Salinispora tropica CNB-440]
Length=205
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/152 (41%), Positives = 89/152 (59%), Gaps = 2/152 (1%)
Query 7 TAHARIREAAIEQFGRHGFG-VGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAEEI 65
+ +RIR+AAI F G G+RAIA AAGV +L+IH+FG+K+GLR ACD VA +
Sbjct 16 STKSRIRDAAITLFADQGVAATGVRAIAAAAGVHPSLIIHYFGTKDGLRVACDKHVAAFV 75
Query 66 RSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAEEYLD 125
R K ++S +A++ ++ PLM YL R++ G L +M+++A +YL
Sbjct 76 REHKQNVMRSAGRFD-VAELRDLGEGPPLMRYLARTLVDGSPHTAALVDEMVNDAVDYLS 134
Query 126 EGVRAGTVKPSRDPRARARFLAITGGGGFLLY 157
EGV +G V+P+ P RA LAI G L+
Sbjct 135 EGVASGLVRPTEHPYERAALLAIWSLGALALH 166
>gi|183982329|ref|YP_001850620.1| transcriptional regulator [Mycobacterium marinum M]
gi|183175655|gb|ACC40765.1| transcriptional regulator [Mycobacterium marinum M]
Length=215
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/208 (37%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query 1 MRSADLTAHARIREAAIEQFGRHGF-GVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDD 59
M SADLTA ARIR AA+ +F R GF V LRAIA +AGVS AL+ HHFGSK+GLR ACD+
Sbjct 1 MCSADLTAKARIRNAAVARFARDGFQKVNLRAIATSAGVSEALIFHHFGSKDGLRAACDE 60
Query 60 FVAEEIRSSKAAALKSNDPTTWL-AQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMID 118
+V + A + L ++ E Y + Y+ R+++ A M++
Sbjct 61 YVLNVLVGRARTAGRPTAMADLLGVYLSNPEEYRLQVQYMARAIEDDAPAAGTFVDTMVE 120
Query 119 NAEEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQM-------HENPTDLRAAL 171
+E G G+++PS DPRA A + G + M H P L
Sbjct 121 ESEAIFRAGAADGSMRPSSDPRALAVLNLLVALGLLTMAPPMARALGHEHFGPEVL---- 176
Query 172 RDYAHDMVLPSLEVYTEGLLADRAMYEA 199
M +P+LE+YT GL D + +A
Sbjct 177 ----QRMAVPALELYTRGLYTDDTLAKA 200
>gi|88855846|ref|ZP_01130509.1| probable transcriptional regulatory protein [marine actinobacterium
PHSC20C1]
gi|88815170|gb|EAR25029.1| probable transcriptional regulatory protein [marine actinobacterium
PHSC20C1]
Length=224
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/203 (34%), Positives = 104/203 (52%), Gaps = 6/203 (2%)
Query 1 MRSA--DLTAHARIREAAIEQFGRHGFGVGLRAIAEA-AGVSAALVIHHFGSKEGLRKAC 57
MRS D T ARIR+AAI GR+GF A AGVSA LVIHHFGS L+ +C
Sbjct 1 MRSTLDDSTTRARIRDAAILLIGRNGFAATSARAVAAQAGVSAGLVIHHFGSMRELKNSC 60
Query 58 DDFVAEEIRSSKAAALKSNDPTTWLAQ-MAEIESYAPLMAYLVRSMQSGGELAKMLWQKM 116
DDF+ EI + + + ++D + + A+++ Y P ++YL R E L+ +
Sbjct 61 DDFIIAEI-AQRKTGMGADDVNAAVQEWYADLDRYQPWLSYLGRLFTDDSEAGADLFDRF 119
Query 117 IDNAEEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAH 176
+ + LD+GV V+PS D ARA L +L + + + +L +
Sbjct 120 VVMSRSMLDDGVAHDQVRPSADEHARAVLLVTHSLSSVILQGHIARSLGSQKLSLASLSR 179
Query 177 DMVLPSLEVYTEGLLADRAMYEA 199
M +LEVYTEG+ + ++ +A
Sbjct 180 -MGNAALEVYTEGIYLNSSVLDA 201
>gi|256392749|ref|YP_003114313.1| TetR family transcriptional regulator [Catenulispora acidiphila
DSM 44928]
gi|256358975|gb|ACU72472.1| transcriptional regulator, TetR family [Catenulispora acidiphila
DSM 44928]
Length=214
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/215 (38%), Positives = 102/215 (48%), Gaps = 21/215 (9%)
Query 1 MRSA--DLTAHARIREAAIEQFGRHGF-GVGLRAIAEAAGVSAALVIHHFGSKEGLRKAC 57
MRS D TA A IR+ A+ F HG V +R IA AAGVSAALV+HHFGSKEGLR
Sbjct 1 MRSIKDDRTARAVIRDEALALFAAHGPDAVSVRQIATAAGVSAALVVHHFGSKEGLRDVV 60
Query 58 DDFVAE-------EIRSSKAAALKSNDPTTWL--AQMAEIESYAPLMAYLVRSMQSGGEL 108
D V E E+ A L T L A + + + +P+ AYL R + + E
Sbjct 61 DRHVLETFDGMLTEMTGEGAPDLYDPAATGSLVEAVLQHLPADSPMPAYLRRMLLTDSEA 120
Query 109 AKMLWQKMIDNAEEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHE----NP 164
K L+ K+ ++ L AG P DP RA FL LL ++ E +P
Sbjct 121 GKELFAKLFAVSQGMLAALSEAGMAAPGADPAVRAAFLMANDLAVLLLRDRLTEVLGVDP 180
Query 165 TDLRAALRDYAHDMVLPSLEVYTEGLLADRAMYEA 199
R +A +M L VY GL AD + EA
Sbjct 181 LSQEGMAR-WASEM----LAVYASGLQADPQLPEA 210
>gi|163839632|ref|YP_001624037.1| TetR family transcriptional regulator [Renibacterium salmoninarum
ATCC 33209]
gi|162953108|gb|ABY22623.1| transcriptional regulator, TetR family [Renibacterium salmoninarum
ATCC 33209]
Length=274
Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/208 (35%), Positives = 98/208 (48%), Gaps = 25/208 (12%)
Query 5 DLTAHARIREAAIEQFGRHGF-GVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAE 63
DL A+IR+AAI F + GF +R IA AAGVS LVIHHFGSK+ LR CDD+V
Sbjct 62 DLNTPAKIRDAAIHLFVQGGFRKTSVRGIASAAGVSPGLVIHHFGSKDKLRAICDDYVLS 121
Query 64 EIRSSKAAALKSNDP------TTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMI 117
+ + A K+N +LA AE Y + YL +++ + M
Sbjct 122 ALLARANA--KTNPAGLQGLIREYLADPAE---YNDSVGYLGKAIAEDSPAGRKFMDIMT 176
Query 118 DNAEEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAAL--RDYA 175
D E L G+ GT++ D R A L +T + M P L AL +++
Sbjct 177 DETEAILKAGMADGTMREISDVRVTAAMLVMTS-------MSMLTMPAYLGRALGFDEFS 229
Query 176 HDMVL----PSLEVYTEGLLADRAMYEA 199
DM+ P LE+YT GL + +A
Sbjct 230 PDMMKRMSRPMLELYTYGLYTNDVFLQA 257
>gi|240173230|ref|ZP_04751888.1| transcriptional regulator [Mycobacterium kansasii ATCC 12478]
Length=201
Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/153 (38%), Positives = 78/153 (51%), Gaps = 10/153 (6%)
Query 5 DLTAHARIREAAIEQFGRHG-FGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACD----- 58
D TA ARIR+ A+ F H V +R IA AAGVSAALVI H+GSK+GL +A D
Sbjct 8 DRTARARIRDEALRLFAEHDPAAVTMRDIATAAGVSAALVIRHYGSKDGLIEAVDNHVVA 67
Query 59 --DFVAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKM 116
D + EI +S P+ + +P+ AYL R + +GG L+ ++
Sbjct 68 TFDVLLTEITGQTPD--QSAVPSLLDGLATHLPPDSPIPAYLSRMLLAGGAAGSTLFARL 125
Query 117 IDNAEEYLDEGVRAGTVKPSRDPRARARFLAIT 149
++ LD V AGT P DP RA FL +
Sbjct 126 FRLSKTALDAMVAAGTASPGADPEIRAAFLLVN 158
>gi|291302765|ref|YP_003514043.1| TetR family transcriptional regulator [Stackebrandtia nassauensis
DSM 44728]
gi|290571985|gb|ADD44950.1| transcriptional regulator, TetR family [Stackebrandtia nassauensis
DSM 44728]
Length=215
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/142 (38%), Positives = 83/142 (59%), Gaps = 7/142 (4%)
Query 5 DLTAHARIREAAIEQFGRHGFG-VGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAE 63
DLTA ARIR+AA+ FG GF +R IAE AGVS+ L+ HH+GSKE LR ACD ++AE
Sbjct 8 DLTARARIRDAALRHFGEQGFDRATIRGIAEIAGVSSGLLRHHYGSKEELRDACDAYLAE 67
Query 64 EIR--SSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAE 121
+ + + A ++D ++A ++ P YL R++ G A+ ++ KM++
Sbjct 68 TLAELNDRVRAADASDGVNYVAVAG--AAFGPYQKYLSRALAEG--RAQPIFDKMVELGG 123
Query 122 EYLDEGVRAGTVKPSRDPRARA 143
++L+E + P+ +ARA
Sbjct 124 QWLEEMDAKRSDPPTVSRQARA 145
>gi|302524900|ref|ZP_07277242.1| transcriptional regulator [Streptomyces sp. AA4]
gi|302433795|gb|EFL05611.1| transcriptional regulator [Streptomyces sp. AA4]
Length=208
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/142 (40%), Positives = 77/142 (55%), Gaps = 6/142 (4%)
Query 5 DLTAHARIREAAIEQFGRHGFG-VGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAE 63
DLTA ARIR+AA+ FG HGF +R IA AGVS LV HHFGSK+ LR+ACD+ + +
Sbjct 6 DLTARARIRDAAMRHFGEHGFERATIRGIAAEAGVSLGLVRHHFGSKQALREACDEHLTK 65
Query 64 EIRSSKAAALK--SNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAE 121
+R A + S T A I + P YL+R++ GG L+ +M++
Sbjct 66 LLRQLDAQVPEDLSASGTANPVAAARI-AVGPYRDYLIRALVEGG--VAPLFDEMVELGT 122
Query 122 EYLDEGVRAGTVKPSRDPRARA 143
L R T P+ +P+ RA
Sbjct 123 RRLVAADRQRTDPPTVEPKVRA 144
>gi|260904178|ref|ZP_05912500.1| TetR family transcriptional regulator [Brevibacterium linens
BL2]
Length=257
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/133 (40%), Positives = 75/133 (57%), Gaps = 3/133 (2%)
Query 11 RIREAAIEQFGRHGFGVG-LRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAEEIRSSK 69
RIR AAI +F HGF +R+IA AA VS LVIHHFGSKEGLR ACD++V + I +K
Sbjct 51 RIRTAAIREFSTHGFTKSTIRSIASAAEVSPGLVIHHFGSKEGLRTACDNYVFDAIAEAK 110
Query 70 AAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAEEYLDEGVR 129
AA + T + + E + A + YL++S+ E + ++ I E+Y+ G
Sbjct 111 AANAEYA--TQAMQMIFEDSNMAMNINYLMKSLLDPSEHGQRYFEHYISLVEDYIAHGFA 168
Query 130 AGTVKPSRDPRAR 142
+ S DPR +
Sbjct 169 GYVFRQSEDPRGQ 181
Lambda K H
0.319 0.133 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 252352077426
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40