BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1226c Length=487 Score E Sequences producing significant alignments: (Bits) Value gi|15608366|ref|NP_215742.1| hypothetical protein Rv1226c [Mycob... 939 0.0 gi|31792419|ref|NP_854912.1| hypothetical protein Mb1258c [Mycob... 938 0.0 gi|326902849|gb|EGE49782.1| transmembrane protein [Mycobacterium... 938 0.0 gi|289757324|ref|ZP_06516702.1| conserved hypothetical protein [... 938 0.0 gi|298524726|ref|ZP_07012135.1| conserved hypothetical protein [... 938 0.0 gi|289744971|ref|ZP_06504349.1| hypothetical transmembrane prote... 938 0.0 gi|306781695|ref|ZP_07420032.1| transmembrane protein [Mycobacte... 937 0.0 gi|289442659|ref|ZP_06432403.1| transmembrane protein [Mycobacte... 937 0.0 gi|306797040|ref|ZP_07435342.1| transmembrane protein [Mycobacte... 934 0.0 gi|340626239|ref|YP_004744691.1| putative transmembrane protein ... 933 0.0 gi|308231784|ref|ZP_07663930.1| bacterial membrane flanked domai... 845 0.0 gi|289761371|ref|ZP_06520749.1| predicted protein [Mycobacterium... 583 2e-164 gi|118471736|ref|YP_885268.1| membrane flanked domain-containing... 562 5e-158 gi|126433201|ref|YP_001068892.1| membrane-flanked domain-contain... 551 9e-155 gi|119866665|ref|YP_936617.1| membrane-flanked domain-containing... 546 3e-153 gi|108797578|ref|YP_637775.1| membrane-flanked domain-containing... 542 6e-152 gi|120401770|ref|YP_951599.1| hypothetical protein Mvan_0755 [My... 541 7e-152 gi|145220754|ref|YP_001131432.1| membrane-flanked domain-contain... 489 3e-136 gi|333989064|ref|YP_004521678.1| membrane flanked domain-contain... 452 6e-125 gi|226365412|ref|YP_002783195.1| hypothetical protein ROP_60030 ... 392 8e-107 gi|111022905|ref|YP_705877.1| hypothetical protein RHA1_ro05942 ... 383 5e-104 gi|312138845|ref|YP_004006181.1| integral membrane protein [Rhod... 367 3e-99 gi|325676453|ref|ZP_08156131.1| membrane protein [Rhodococcus eq... 365 9e-99 gi|333921029|ref|YP_004494610.1| hypothetical protein AS9A_3369 ... 344 2e-92 gi|226307673|ref|YP_002767633.1| hypothetical protein RER_41860 ... 340 4e-91 gi|229493904|ref|ZP_04387676.1| bacterial membrane flanked domai... 339 5e-91 gi|296268838|ref|YP_003651470.1| hypothetical protein Tbis_0853 ... 273 4e-71 gi|54026728|ref|YP_120970.1| hypothetical protein nfa47540 [Noca... 267 2e-69 gi|119717734|ref|YP_924699.1| membrane-flanked domain-containing... 261 2e-67 gi|256375205|ref|YP_003098865.1| membrane-flanked domain-contain... 251 2e-64 gi|317126482|ref|YP_004100594.1| membrane-flanked domain [Intras... 239 7e-61 gi|319950847|ref|ZP_08024731.1| membrane-flanked domain-containi... 236 9e-60 gi|302529901|ref|ZP_07282243.1| predicted protein [Streptomyces ... 216 8e-54 gi|343927650|ref|ZP_08767118.1| hypothetical protein GOALK_097_0... 216 9e-54 gi|300789664|ref|YP_003769955.1| hypothetical protein AMED_7846 ... 212 1e-52 gi|258653931|ref|YP_003203087.1| membrane-flanked domain-contain... 211 2e-52 gi|291300312|ref|YP_003511590.1| hypothetical protein Snas_2821 ... 190 4e-46 gi|296139056|ref|YP_003646299.1| membrane-flanked domain-contain... 187 4e-45 gi|262203457|ref|YP_003274665.1| membrane-flanked domain-contain... 184 3e-44 gi|291302522|ref|YP_003513800.1| hypothetical protein Snas_5071 ... 181 2e-43 gi|134097811|ref|YP_001103472.1| membrane-flanked domain-contain... 177 5e-42 gi|62737765|gb|AAX98182.1| putative membrane protein [Streptomyc... 175 2e-41 gi|331698792|ref|YP_004335031.1| membrane protein [Pseudonocardi... 170 5e-40 gi|345015253|ref|YP_004817607.1| hypothetical protein Strvi_8004... 167 4e-39 gi|320011437|gb|ADW06287.1| membrane-flanked domain protein [Str... 166 7e-39 gi|326331002|ref|ZP_08197301.1| bacterial membrane flanked domai... 166 1e-38 gi|257055485|ref|YP_003133317.1| hypothetical protein Svir_14500... 162 1e-37 gi|229821789|ref|YP_002883315.1| membrane-flanked domain-contain... 161 3e-37 gi|269956868|ref|YP_003326657.1| membrane-flanked domain-contain... 160 6e-37 gi|297195055|ref|ZP_06912453.1| membrane-flanked domain-containi... 159 1e-36 >gi|15608366|ref|NP_215742.1| hypothetical protein Rv1226c [Mycobacterium tuberculosis H37Rv] gi|15840670|ref|NP_335707.1| hypothetical protein MT1264 [Mycobacterium tuberculosis CDC1551] gi|148661013|ref|YP_001282536.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra] 27 more sequence titles Length=487 Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust. Identities = 487/487 (100%), Positives = 487/487 (100%), Gaps = 0/487 (0%) Query 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL Sbjct 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 Query 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA Sbjct 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 Query 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG Sbjct 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 Query 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY Sbjct 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 Query 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG 300 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG Sbjct 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG 300 Query 301 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG Sbjct 301 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 Query 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC Sbjct 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 Query 421 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS 480 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS Sbjct 421 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS 480 Query 481 VWLRHGS 487 VWLRHGS Sbjct 481 VWLRHGS 487 >gi|31792419|ref|NP_854912.1| hypothetical protein Mb1258c [Mycobacterium bovis AF2122/97] gi|121637155|ref|YP_977378.1| putative transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989630|ref|YP_002644317.1| putative transmembrane protein [Mycobacterium bovis BCG str. Tokyo 172] 10 more sequence titles Length=487 Score = 938 bits (2425), Expect = 0.0, Method: Compositional matrix adjust. Identities = 486/487 (99%), Positives = 486/487 (99%), Gaps = 0/487 (0%) Query 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL Sbjct 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 Query 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA Sbjct 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 Query 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG Sbjct 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 Query 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY Sbjct 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 Query 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG 300 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG Sbjct 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG 300 Query 301 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG Sbjct 301 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 Query 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC Sbjct 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 Query 421 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS 480 IACTGIIGWTVRQTLFQRRAGVATLVAAT AGRKGYQVLDVPAELAWSVAGAASPWVADS Sbjct 421 IACTGIIGWTVRQTLFQRRAGVATLVAATAAGRKGYQVLDVPAELAWSVAGAASPWVADS 480 Query 481 VWLRHGS 487 VWLRHGS Sbjct 481 VWLRHGS 487 >gi|326902849|gb|EGE49782.1| transmembrane protein [Mycobacterium tuberculosis W-148] Length=487 Score = 938 bits (2425), Expect = 0.0, Method: Compositional matrix adjust. Identities = 486/487 (99%), Positives = 486/487 (99%), Gaps = 0/487 (0%) Query 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL Sbjct 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 Query 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 RWFFTTYRIDDENVSLRTGILSRRAVS PRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA Sbjct 61 RWFFTTYRIDDENVSLRTGILSRRAVSFPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 Query 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG Sbjct 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 Query 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY Sbjct 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 Query 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG 300 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG Sbjct 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG 300 Query 301 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG Sbjct 301 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 Query 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC Sbjct 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 Query 421 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS 480 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS Sbjct 421 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS 480 Query 481 VWLRHGS 487 VWLRHGS Sbjct 481 VWLRHGS 487 >gi|289757324|ref|ZP_06516702.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289712888|gb|EFD76900.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] Length=487 Score = 938 bits (2425), Expect = 0.0, Method: Compositional matrix adjust. Identities = 486/487 (99%), Positives = 487/487 (100%), Gaps = 0/487 (0%) Query 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL Sbjct 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 Query 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA Sbjct 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 Query 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG Sbjct 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 Query 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY Sbjct 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 Query 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG 300 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARL+AVMTG Sbjct 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLNAVMTG 300 Query 301 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG Sbjct 301 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 Query 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC Sbjct 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 Query 421 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS 480 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS Sbjct 421 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS 480 Query 481 VWLRHGS 487 VWLRHGS Sbjct 481 VWLRHGS 487 >gi|298524726|ref|ZP_07012135.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298494520|gb|EFI29814.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=487 Score = 938 bits (2425), Expect = 0.0, Method: Compositional matrix adjust. Identities = 486/487 (99%), Positives = 487/487 (100%), Gaps = 0/487 (0%) Query 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL Sbjct 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 Query 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA Sbjct 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 Query 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG Sbjct 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 Query 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 AVIGLGYQTGLAVRLPESGF+RSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY Sbjct 181 AVIGLGYQTGLAVRLPESGFSRSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 Query 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG 300 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG Sbjct 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG 300 Query 301 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG Sbjct 301 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 Query 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC Sbjct 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 Query 421 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS 480 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS Sbjct 421 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS 480 Query 481 VWLRHGS 487 VWLRHGS Sbjct 481 VWLRHGS 487 >gi|289744971|ref|ZP_06504349.1| hypothetical transmembrane protein [Mycobacterium tuberculosis 02_1987] gi|289685499|gb|EFD52987.1| hypothetical transmembrane protein [Mycobacterium tuberculosis 02_1987] Length=487 Score = 938 bits (2424), Expect = 0.0, Method: Compositional matrix adjust. Identities = 486/487 (99%), Positives = 486/487 (99%), Gaps = 0/487 (0%) Query 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL Sbjct 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 Query 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA Sbjct 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 Query 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG Sbjct 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 Query 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY Sbjct 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 Query 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG 300 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLR ATLREPLLVRLLRGARLDAVMTG Sbjct 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRSATLREPLLVRLLRGARLDAVMTG 300 Query 301 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG Sbjct 301 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 Query 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC Sbjct 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 Query 421 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS 480 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS Sbjct 421 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS 480 Query 481 VWLRHGS 487 VWLRHGS Sbjct 481 VWLRHGS 487 >gi|306781695|ref|ZP_07420032.1| transmembrane protein [Mycobacterium tuberculosis SUMu002] gi|306783945|ref|ZP_07422267.1| transmembrane protein [Mycobacterium tuberculosis SUMu003] gi|306788309|ref|ZP_07426631.1| transmembrane protein [Mycobacterium tuberculosis SUMu004] 7 more sequence titles Length=487 Score = 937 bits (2423), Expect = 0.0, Method: Compositional matrix adjust. Identities = 486/487 (99%), Positives = 486/487 (99%), Gaps = 0/487 (0%) Query 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL Sbjct 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 Query 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA Sbjct 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 Query 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG Sbjct 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 Query 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY Sbjct 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 Query 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG 300 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRG TLREPLLVRLLRGARLDAVMTG Sbjct 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGTTLREPLLVRLLRGARLDAVMTG 300 Query 301 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG Sbjct 301 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 Query 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC Sbjct 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 Query 421 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS 480 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS Sbjct 421 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS 480 Query 481 VWLRHGS 487 VWLRHGS Sbjct 481 VWLRHGS 487 >gi|289442659|ref|ZP_06432403.1| transmembrane protein [Mycobacterium tuberculosis T46] gi|289569229|ref|ZP_06449456.1| transmembrane protein [Mycobacterium tuberculosis T17] gi|289749768|ref|ZP_06509146.1| transmembrane protein [Mycobacterium tuberculosis T92] gi|289753296|ref|ZP_06512674.1| transmembrane protein [Mycobacterium tuberculosis EAS054] gi|289415578|gb|EFD12818.1| transmembrane protein [Mycobacterium tuberculosis T46] gi|289542983|gb|EFD46631.1| transmembrane protein [Mycobacterium tuberculosis T17] gi|289690355|gb|EFD57784.1| transmembrane protein [Mycobacterium tuberculosis T92] gi|289693883|gb|EFD61312.1| transmembrane protein [Mycobacterium tuberculosis EAS054] Length=487 Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust. Identities = 485/487 (99%), Positives = 485/487 (99%), Gaps = 0/487 (0%) Query 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL Sbjct 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 Query 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA Sbjct 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 Query 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG Sbjct 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 Query 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY Sbjct 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 Query 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG 300 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG Sbjct 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG 300 Query 301 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 VH EGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG Sbjct 301 VHSEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 Query 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC Sbjct 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 Query 421 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS 480 IACTGIIGWTVRQTLFQRRAGVATLVAAT AGRKGYQVLDVPAELAWSVAGAASPWVADS Sbjct 421 IACTGIIGWTVRQTLFQRRAGVATLVAATAAGRKGYQVLDVPAELAWSVAGAASPWVADS 480 Query 481 VWLRHGS 487 VWLRHGS Sbjct 481 VWLRHGS 487 >gi|306797040|ref|ZP_07435342.1| transmembrane protein [Mycobacterium tuberculosis SUMu006] gi|308342575|gb|EFP31426.1| transmembrane protein [Mycobacterium tuberculosis SUMu006] Length=487 Score = 934 bits (2413), Expect = 0.0, Method: Compositional matrix adjust. Identities = 485/487 (99%), Positives = 485/487 (99%), Gaps = 0/487 (0%) Query 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL Sbjct 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 Query 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA Sbjct 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 Query 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG Sbjct 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 Query 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY Sbjct 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 Query 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG 300 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRG TLREPLLVRLLRGA LDAVMTG Sbjct 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGTTLREPLLVRLLRGAPLDAVMTG 300 Query 301 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG Sbjct 301 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 Query 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC Sbjct 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 Query 421 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS 480 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS Sbjct 421 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS 480 Query 481 VWLRHGS 487 VWLRHGS Sbjct 481 VWLRHGS 487 >gi|340626239|ref|YP_004744691.1| putative transmembrane protein [Mycobacterium canettii CIPT 140010059] gi|340004429|emb|CCC43572.1| putative transmembrane protein [Mycobacterium canettii CIPT 140010059] Length=487 Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust. Identities = 483/487 (99%), Positives = 484/487 (99%), Gaps = 0/487 (0%) Query 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 MTDRP+DWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL Sbjct 1 MTDRPNDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 Query 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA Sbjct 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 Query 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 RGEA FELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG Sbjct 121 RGEATFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 Query 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY Sbjct 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 Query 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG 300 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG Sbjct 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG 300 Query 301 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 VHGEGQSSMLLPPCPFETATAVLTDLIDN DAAAGPLRRHGPAAARRRWTRALLVPTLAG Sbjct 301 VHGEGQSSMLLPPCPFETATAVLTDLIDNADAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 Query 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC Sbjct 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 Query 421 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADS 480 IACTGIIGWTVRQTLFQRRAGVATLVAAT AGRKGYQVLDVPAELAWSVAGAASPWVADS Sbjct 421 IACTGIIGWTVRQTLFQRRAGVATLVAATAAGRKGYQVLDVPAELAWSVAGAASPWVADS 480 Query 481 VWLRHGS 487 VWLRHGS Sbjct 481 VWLRHGS 487 >gi|308231784|ref|ZP_07663930.1| bacterial membrane flanked domain protein [Mycobacterium tuberculosis SUMu001] gi|308216098|gb|EFO75497.1| bacterial membrane flanked domain protein [Mycobacterium tuberculosis SUMu001] Length=490 Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/441 (100%), Positives = 441/441 (100%), Gaps = 0/441 (0%) Query 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL Sbjct 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 Query 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA Sbjct 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 Query 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG Sbjct 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 Query 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY Sbjct 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 Query 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG 300 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG Sbjct 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG 300 Query 301 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG Sbjct 301 VHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 Query 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC Sbjct 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 Query 421 IACTGIIGWTVRQTLFQRRAG 441 IACTGIIGWTVRQTLFQRRAG Sbjct 421 IACTGIIGWTVRQTLFQRRAG 441 >gi|289761371|ref|ZP_06520749.1| predicted protein [Mycobacterium tuberculosis GM 1503] gi|289708877|gb|EFD72893.1| predicted protein [Mycobacterium tuberculosis GM 1503] Length=322 Score = 583 bits (1504), Expect = 2e-164, Method: Compositional matrix adjust. Identities = 304/304 (100%), Positives = 304/304 (100%), Gaps = 0/304 (0%) Query 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL Sbjct 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 Query 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA Sbjct 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 Query 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG Sbjct 121 RGEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIG 180 Query 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY Sbjct 181 AVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY 240 Query 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG 300 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG Sbjct 241 GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG 300 Query 301 VHGE 304 VHGE Sbjct 301 VHGE 304 >gi|118471736|ref|YP_885268.1| membrane flanked domain-containing protein [Mycobacterium smegmatis str. MC2 155] gi|118173023|gb|ABK73919.1| bacterial membrane flanked domain family protein [Mycobacterium smegmatis str. MC2 155] Length=499 Score = 562 bits (1449), Expect = 5e-158, Method: Compositional matrix adjust. Identities = 307/480 (64%), Positives = 381/480 (80%), Gaps = 9/480 (1%) Query 8 WHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVLRWFFTTY 67 W RLSPRMLLVHPVHE+L+Q+P+L+GSVVLGSATGNP+W +AA+ +T++FG+ RWF TTY Sbjct 14 WQRLSPRMLLVHPVHEVLQQIPLLVGSVVLGSATGNPLWTVAAIVLTILFGLARWFTTTY 73 Query 68 RIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEARGEAAFE 127 RI+ V LRTG+L R+ ++VPRNRIRSV T+ARLLHR++GLTVLR+ TGQEA+G+A F Sbjct 74 RIEPNEVQLRTGVLQRKVLAVPRNRIRSVSTDARLLHRVMGLTVLRISTGQEAKGDAEFA 133 Query 128 LDAVDSARVPRLRALLLAE--SLAPVE--PTGRVLARWQSSWLRYAPLSFSGLVMIGAVI 183 LDAV++ +VPRLRA+LLA+ +P E P GR LARWQ +WLRY+PLSF+GL MI A Sbjct 134 LDAVEAGQVPRLRAILLADLADASPEEHVPAGRELARWQPAWLRYSPLSFTGLAMILAAF 193 Query 184 GLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTYGNL 243 G+ YQ G + +S FA+S +DAA+R GV + +A+ V V+ S +L+VL S LTYGNL Sbjct 194 GIVYQAGAGALMRDSAFAQSGLDAAERLGVAVSIAIVVGAVLVASVVLSVLRSLLTYGNL 253 Query 244 LL-RRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTGVH 302 +L RR G G +GVLHL+HGLLRVREHTYDMRRLRG TLREPLLVR+ GARLDAVMTG+ Sbjct 254 VLTRRDGPGGDGVLHLQHGLLRVREHTYDMRRLRGGTLREPLLVRVFGGARLDAVMTGIG 313 Query 303 GEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAGVA 362 GEG++S+LLPPCP TA VLT LI DA +GPLR HGPAA RRRWTRAL++P +A Sbjct 314 GEGEASLLLPPCPAATARGVLTALIGRPDAVSGPLRPHGPAATRRRWTRALVLPVIA--- 370 Query 363 LIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDCIA 422 + ++GVP WAW LWA++T A LA DR R+LGHRV WLVA+AGS++RRRDC+ Sbjct 371 -LPVLAVVGVPVWAWVLWALVTVAAALLAADRSRALGHRVDGDWLVAQAGSVERRRDCLH 429 Query 423 CTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADSVW 482 GIIGWTVRQTL QRRAGVATL+AAT AG+K Y+V+DVPA AW++A A +PW+ADSVW Sbjct 430 TDGIIGWTVRQTLLQRRAGVATLIAATAAGQKRYEVIDVPAGQAWAIAAAGTPWIADSVW 489 >gi|126433201|ref|YP_001068892.1| membrane-flanked domain-containing protein [Mycobacterium sp. JLS] gi|126233001|gb|ABN96401.1| membrane-flanked domain [Mycobacterium sp. JLS] Length=486 Score = 551 bits (1420), Expect = 9e-155, Method: Compositional matrix adjust. Identities = 325/481 (68%), Positives = 364/481 (76%), Gaps = 7/481 (1%) Query 7 DWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVLRWFFTT 66 W RLSPRMLLVHPVHE+LRQ+PVLIGSVVLGSATGNP W +AAL TV G+ RWF TT Sbjct 9 QWLRLSPRMLLVHPVHEVLRQVPVLIGSVVLGSATGNPWWAVAALVGTVGVGIARWFTTT 68 Query 67 YRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEARGEAAF 126 YRID E V LR G+L RR +SVPRNRIRSV T+ARLLHR+LGL VLRV TGQEARG+ AF Sbjct 69 YRIDAEEVQLRAGVLQRRVLSVPRNRIRSVSTDARLLHRVLGLAVLRVSTGQEARGDDAF 128 Query 127 ELDAVDSARVPRLRALLLAESL---APVEPTGRVLARWQSSWLRYAPLSFSGLVMIGAVI 183 LDAV++A+VP LRA LLAESL A E GRVLA WQ +WLRY+PLSF+GL MI A Sbjct 129 ALDAVEAAQVPHLRAELLAESLTIAADSEHRGRVLASWQPAWLRYSPLSFTGLAMIAAAA 188 Query 184 GLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTYGNL 243 GL YQ G V L +S A A+R GV VAV VL V+ S +L+VL S +TYGNL Sbjct 189 GLLYQAGAGVLLRDSSLAEGGRGVAERFGVAATVAVVVLAVLVGSVVLSVLRSLVTYGNL 248 Query 244 LLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTGVHG 303 LLRR G VLHL HGLLR +EHTYDMRRLRG TLREPLLVR GARLDAVMTGV G Sbjct 249 LLRRDGE----VLHLEHGLLRRQEHTYDMRRLRGGTLREPLLVRAFGGARLDAVMTGVGG 304 Query 304 EGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAGVAL 363 EG++S+LLPPCP TA AVL+DLI + + AGPLR HG AAARRRWTRAL VP GVAL Sbjct 305 EGEASLLLPPCPAATARAVLSDLIADEEEVAGPLRSHGVAAARRRWTRALAVPVAMGVAL 364 Query 364 IAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDCIAC 423 + A + P W W +WAVL CA LA DRVRSLGHR DGWLVAR GSL+RRRDCIA Sbjct 365 VVATVLTAPPIWLWAVWAVLAVCCALLAADRVRSLGHRAGDGWLVARTGSLERRRDCIAG 424 Query 424 TGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADSVWL 483 GIIGWTV+QT FQRR+GVATL+AAT AG K Y+V+DVPA+ AWS+ AASPWV D W Sbjct 425 PGIIGWTVQQTFFQRRSGVATLIAATAAGEKAYRVVDVPADAAWSIVAAASPWVRDVPWA 484 Query 484 R 484 R Sbjct 485 R 485 >gi|119866665|ref|YP_936617.1| membrane-flanked domain-containing protein [Mycobacterium sp. KMS] gi|119692754|gb|ABL89827.1| membrane-flanked domain [Mycobacterium sp. KMS] Length=486 Score = 546 bits (1407), Expect = 3e-153, Method: Compositional matrix adjust. Identities = 324/481 (68%), Positives = 362/481 (76%), Gaps = 7/481 (1%) Query 7 DWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVLRWFFTT 66 W RLSPRMLLVHPVHE+LRQ+PVLIGSVVLGSATGNP W +AAL TV G+ RWF TT Sbjct 9 QWLRLSPRMLLVHPVHEVLRQVPVLIGSVVLGSATGNPWWAVAALVGTVGVGIARWFTTT 68 Query 67 YRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEARGEAAF 126 YRID E V LR G+L RR +SVPRNRIRSV T+ARLLHR+LGL VLRV TGQEARG+ AF Sbjct 69 YRIDAEEVQLRAGVLQRRVLSVPRNRIRSVSTDARLLHRVLGLAVLRVSTGQEARGDDAF 128 Query 127 ELDAVDSARVPRLRALLLAESL---APVEPTGRVLARWQSSWLRYAPLSFSGLVMIGAVI 183 LDAV++A+VP LRA LLAESL A E GRVLARWQ +WLRY+PLSF+GL MI A Sbjct 129 ALDAVEAAQVPHLRAELLAESLTIAADPEHRGRVLARWQPAWLRYSPLSFTGLAMIAAAA 188 Query 184 GLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTYGNL 243 GL YQ G V L +S A A+R GV VAV VL V+ S +L+VL S +TYGNL Sbjct 189 GLLYQAGAGVLLRDSSLAEGGRGVAERFGVAATVAVVVLAVLVGSVVLSVLRSLVTYGNL 248 Query 244 LLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTGVHG 303 LL R G VLHL HGLLR +EHTYDMRRLRG TLREPLLVR GARLDAVMTGV G Sbjct 249 LLWRDGE----VLHLEHGLLRRQEHTYDMRRLRGGTLREPLLVRAFGGARLDAVMTGVGG 304 Query 304 EGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAGVAL 363 EG++S+LLPPCP TA AVL+DLI + + AGPLR HG AAARRRWTRAL VP GVAL Sbjct 305 EGEASLLLPPCPAATARAVLSDLIADEEEVAGPLRSHGVAAARRRWTRALAVPVAMGVAL 364 Query 364 IAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDCIAC 423 + A P W W +WAVL CA LA DRVRSLGHR GWLVAR GSL+RRRDCIA Sbjct 365 VVATVFTAPPIWLWAVWAVLAVCCALLAADRVRSLGHRAGHGWLVARTGSLERRRDCIAG 424 Query 424 TGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADSVWL 483 GIIGWTV+QT FQRR+GVATL+AAT AG K Y+V+DVPA+ AWS+ AASPWV D W Sbjct 425 PGIIGWTVQQTFFQRRSGVATLIAATAAGEKAYRVVDVPADAAWSIVAAASPWVRDVPWA 484 Query 484 R 484 R Sbjct 485 R 485 >gi|108797578|ref|YP_637775.1| membrane-flanked domain-containing protein [Mycobacterium sp. MCS] gi|108767997|gb|ABG06719.1| membrane-flanked domain protein [Mycobacterium sp. MCS] Length=474 Score = 542 bits (1396), Expect = 6e-152, Method: Compositional matrix adjust. Identities = 321/477 (68%), Positives = 360/477 (76%), Gaps = 7/477 (1%) Query 11 LSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVLRWFFTTYRID 70 +SPRMLLVHPVHE+LRQ+PVLIGSVVLGSATGNP W +AAL TV G+ RWF TTYRID Sbjct 1 MSPRMLLVHPVHEVLRQVPVLIGSVVLGSATGNPWWAVAALVGTVGVGIARWFTTTYRID 60 Query 71 DENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEARGEAAFELDA 130 E V LR G+L RR +SVPRNRIRSV T+ARLLHR+LGL VLRV TGQEARG+ AF LDA Sbjct 61 AEEVQLRAGVLQRRVLSVPRNRIRSVSTDARLLHRVLGLAVLRVSTGQEARGDDAFALDA 120 Query 131 VDSARVPRLRALLLAESL---APVEPTGRVLARWQSSWLRYAPLSFSGLVMIGAVIGLGY 187 V++A+VP LRA LLAESL A E GRVLARWQ +WLRY+PLSF+GL MI A GL Y Sbjct 121 VEAAQVPHLRAELLAESLTIAADPEHRGRVLARWQPAWLRYSPLSFTGLAMIAAAAGLLY 180 Query 188 QTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTYGNLLLRR 247 Q G V L +S A A+R GV VAV VL V+ S +L+VL S +TYGNLLL R Sbjct 181 QAGAGVLLRDSSLAEGGRGVAERFGVAATVAVVVLAVLVGSVVLSVLRSLVTYGNLLLWR 240 Query 248 GGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTGVHGEGQS 307 G VLHL HGLLR +EHTYDMRRLRG TLREPLLVR GARLDAVMTGV GEG++ Sbjct 241 DGE----VLHLEHGLLRRQEHTYDMRRLRGGTLREPLLVRAFGGARLDAVMTGVGGEGEA 296 Query 308 SMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAGVALIAAA 367 S+LLPPCP TA AVL+DLI + + AGPLR HG AAARRRWTRAL VP GVAL+ A Sbjct 297 SLLLPPCPAATARAVLSDLIADEEEVAGPLRSHGVAAARRRWTRALAVPVAMGVALVVAT 356 Query 368 PILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDCIACTGII 427 P W W +WAVL CA LA DRVRSLGHR GWLVAR GSL+RRRDCIA GII Sbjct 357 VFTAPPIWLWAVWAVLAVCCALLAADRVRSLGHRAGHGWLVARTGSLERRRDCIAGPGII 416 Query 428 GWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADSVWLR 484 GWTV+QT FQRR+GVATL+AAT AG K Y+V+DVPA+ AWS+ AASPWV D W R Sbjct 417 GWTVQQTFFQRRSGVATLIAATAAGEKAYRVVDVPADAAWSIVAAASPWVRDVPWAR 473 >gi|120401770|ref|YP_951599.1| hypothetical protein Mvan_0755 [Mycobacterium vanbaalenii PYR-1] gi|119954588|gb|ABM11593.1| membrane-flanked domain [Mycobacterium vanbaalenii PYR-1] Length=480 Score = 541 bits (1395), Expect = 7e-152, Method: Compositional matrix adjust. Identities = 312/481 (65%), Positives = 363/481 (76%), Gaps = 8/481 (1%) Query 7 DWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVLRWFFTT 66 +W RLSPRMLLVHPVHE++RQ+PVL+GS+VLGSATGNP+W +A + + + +G+ RWF TT Sbjct 4 EWSRLSPRMLLVHPVHEVVRQIPVLVGSLVLGSATGNPLWAVAGVALVIAYGLARWFTTT 63 Query 67 YRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEARGEAAF 126 YRI ++V LRTG+L R +SVPRNRIRSV T+ARLLHRLLGLTV+RV TGQEA G+ +F Sbjct 64 YRIGADDVQLRTGVLQRNVLSVPRNRIRSVSTDARLLHRLLGLTVVRVSTGQEATGDTSF 123 Query 127 ELDAVDSARVPRLRALLLAESLAPV---EPTGRVLARWQSSWLRYAPLSFSGLVMIGAVI 183 ELDAV A V RLRA+LLAESL P EPT RVLARWQ SWLRY+PL+F+GL+MI A + Sbjct 124 ELDAVPVAEVARLRAILLAESLVPAGSAEPT-RVLARWQPSWLRYSPLTFTGLLMIAAAL 182 Query 184 GLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTYGNL 243 GL G+ L +SG R AA+ GV+ V V V +V+ S L+VL S L+YGNL Sbjct 183 GLLSHPGVFGALRDSGLVRKGERAAESLGVLGAVTVVVAVVLTASVALSVLQSLLSYGNL 242 Query 244 LLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTGVHG 303 +LRR VLHL HGLLRVREHT+DMRRLRG TLREPLLVRL GARLDAVMTGV G Sbjct 243 VLRRDAE----VLHLSHGLLRVREHTFDMRRLRGGTLREPLLVRLFGGARLDAVMTGVAG 298 Query 304 EGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAGVAL 363 G++S LLPPCP TA AVL DLID DA GPL HGP A RRRWTRA+L P V L Sbjct 299 AGEASQLLPPCPRGTAEAVLADLIDRPDAVTGPLTAHGPVATRRRWTRAMLAPAAVVVGL 358 Query 364 IAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDCIAC 423 + + VPG AW + AVLT GC LA DR RSLGHRV GWLVARAGSLQRRRDC+A Sbjct 359 AVVSVVTDVPGSAWLVPAVLTVGCGFLAFDRARSLGHRVGGGWLVARAGSLQRRRDCVAA 418 Query 424 TGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADSVWL 483 GI+GWTVRQ+L QRRAGVATLVAAT AG K Y+V+DVPA+LAWS+A A SPWV + W Sbjct 419 AGIVGWTVRQSLPQRRAGVATLVAATAAGVKRYEVIDVPADLAWSIAAATSPWVGATAWA 478 Query 484 R 484 R Sbjct 479 R 479 >gi|145220754|ref|YP_001131432.1| membrane-flanked domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|315442293|ref|YP_004075172.1| hypothetical protein Mspyr1_06320 [Mycobacterium sp. Spyr1] gi|145213240|gb|ABP42644.1| membrane-flanked domain [Mycobacterium gilvum PYR-GCK] gi|315260596|gb|ADT97337.1| predicted membrane protein [Mycobacterium sp. Spyr1] Length=483 Score = 489 bits (1260), Expect = 3e-136, Method: Compositional matrix adjust. Identities = 299/482 (63%), Positives = 356/482 (74%), Gaps = 7/482 (1%) Query 7 DWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVLRWFFTT 66 DW RLSPRML+VHPVHE++RQ+PVLIGS+V+GSATGNP+W + + + V +G+ RWF TT Sbjct 6 DWLRLSPRMLVVHPVHEVVRQIPVLIGSLVVGSATGNPLWAVVGVVLIVGYGLARWFTTT 65 Query 67 YRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEARGEAAF 126 YRI + V LRTG+L R +SVPRNRIRSV T+ARLLHRLLGLTVL+V TGQEA G+ F Sbjct 66 YRIGADEVQLRTGVLQRTVLSVPRNRIRSVSTDARLLHRLLGLTVLKVSTGQEATGDGVF 125 Query 127 ELDAVDSARVPRLRALLLAESLAPVEPT---GRVLARWQSSWLRYAPLSFSGLVMIGAVI 183 ELDAV +A V RLRA+LLAESLA + GR LARWQ SWLRY+PL+F+GL+ I A + Sbjct 126 ELDAVPAAEVGRLRAVLLAESLAAPDVARAGGRELARWQPSWLRYSPLTFTGLITIVAAL 185 Query 184 GLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTYGNL 243 G+ QTG+ L +S R+ A R GV + VA+ V+ S +L+V S ++YGNL Sbjct 186 GVISQTGVLGALQDSQIVRAGEQATDRVGVAVAVALGAGAVLVASVVLSVTQSLISYGNL 245 Query 244 LLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTGVHG 303 +LRR VLHL HGLLRVRE T+DMRRLRG TLREPLLVRL GARLDAVMTGV G Sbjct 246 VLRRDAE----VLHLSHGLLRVRERTFDMRRLRGGTLREPLLVRLFGGARLDAVMTGVTG 301 Query 304 EGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAGVAL 363 G++S LLPPCP TA +VL DLI+ A GPL HG AA RRRWTRA+ VP L AL Sbjct 302 AGEASQLLPPCPRATAESVLIDLIEQPAAVTGPLTGHGRAAMRRRWTRAMTVPVLLAAAL 361 Query 364 IAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDCIAC 423 + A VP WAW A A LA DRVR+LGHR+ DGWLVARAGSLQRRRDCIA Sbjct 362 LVWAVFDAVPPWAWAAPAATAVAGALLAADRVRALGHRIGDGWLVARAGSLQRRRDCIAA 421 Query 424 TGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPWVADSVWL 483 GI+GWTVRQTLFQRRAGVATL+AAT AG K Y+++DVPA+ AW++AGA SPW+A + W Sbjct 422 AGIVGWTVRQTLFQRRAGVATLIAATAAGVKRYELIDVPADAAWAIAGATSPWLAATGWA 481 Query 484 RH 485 R Sbjct 482 RR 483 >gi|333989064|ref|YP_004521678.1| membrane flanked domain-containing protein [Mycobacterium sp. JDM601] gi|333485032|gb|AEF34424.1| membrane flanked domain-containing protein [Mycobacterium sp. JDM601] Length=493 Score = 452 bits (1163), Expect = 6e-125, Method: Compositional matrix adjust. Identities = 299/488 (62%), Positives = 347/488 (72%), Gaps = 12/488 (2%) Query 8 WHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVLRWFFTTY 67 W RLSPRMLLVHP+HE LR+LP+LI VV GSAT N VW LA +GV V GV RWF TTY Sbjct 7 WQRLSPRMLLVHPLHEALRELPLLIAVVVFGSATDNSVWVLAVVGVIAVVGVARWFTTTY 66 Query 68 RIDDEN----VSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEARGE 123 RI+ ++ V LR+G+L R+ +SVPRNRIRSV+T+ARLLHR+LGLTVLRV TGQ+A G+ Sbjct 67 RIEPDSEAGRVQLRSGLLRRKVLSVPRNRIRSVETDARLLHRMLGLTVLRVSTGQQAAGD 126 Query 124 AAFELDAVDSARVPRLRALLLAESLAP-------VEPTGRVLARWQSSWLRYAPLSFSGL 176 FELDAV+S +VP+LR +LLA + P V VLARW+ SWLRY+ LS SGL Sbjct 127 TMFELDAVESNQVPQLRRILLAHTGQPARTDAGAVAARTTVLARWRPSWLRYSALSLSGL 186 Query 177 VMIGAVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFS 236 V IGA +G YQ+G L +S R+ + AA+R G A LV+ + LLAVL S Sbjct 187 VTIGAAVGALYQSGAGEALRDSALHRAWLAAAERFGAQQTAAAIAGLVLLAAILLAVLRS 246 Query 237 WLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDA 296 LTYGNL+L R VL L HGLLRVR H+YDMRRLRG TLR PLLVRL GARLDA Sbjct 247 ALTYGNLVLSRSSGATGDVLELSHGLLRVRHHSYDMRRLRGGTLRRPLLVRLFGGARLDA 306 Query 297 VMTGVHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVP 356 MTGV G G+SS+LLPPCP TA VLT L+ + GPLRRHGPAA RRWTRA+L+P Sbjct 307 AMTGVTGAGESSVLLPPCPRATAEQVLTGLVADPVVVTGPLRRHGPAAVGRRWTRAMLLP 366 Query 357 TLAGVALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQR 416 +AG AL+ AA I GVP W WT WA LT G A LA DR R+LGHRV WL A GS ++ Sbjct 367 LVAGAALVVAA-IDGVPMWYWTAWAALTLGAALLAADRARALGHRVDPQWLSASTGSWEQ 425 Query 417 RRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASPW 476 RR CIA GIIGWTVRQ+ FQRRAGVATL+AAT AG K Y+V+DVP LAWSVA ASPW Sbjct 426 RRYCIATAGIIGWTVRQSWFQRRAGVATLIAATAAGVKAYRVIDVPEALAWSVAATASPW 485 Query 477 VADSVWLR 484 VA S W R Sbjct 486 VAHSKWAR 493 >gi|226365412|ref|YP_002783195.1| hypothetical protein ROP_60030 [Rhodococcus opacus B4] gi|226243902|dbj|BAH54250.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=513 Score = 392 bits (1006), Expect = 8e-107, Method: Compositional matrix adjust. Identities = 239/499 (48%), Positives = 313/499 (63%), Gaps = 32/499 (6%) Query 6 HDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVLRWFFT 65 W RL+ RMLLVHPV+E+++ LPVL+ S+V+G+ +GN VW L A+ V VVFGV RWF T Sbjct 26 QPWLRLNRRMLLVHPVNEIVKLLPVLLISLVIGTQSGNHVWSLVAIVVFVVFGVSRWFTT 85 Query 66 TYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEARGE-- 123 +YRI +V LR G+ +R +SVPRNRIRSV EA +LHRLLGL+++R+GTGQ+ + Sbjct 86 SYRIGPVHVQLRQGLFRKRLLSVPRNRIRSVDVEAGVLHRLLGLSIVRIGTGQQVGSKPD 145 Query 124 -AAFELDAVDSARVPRLRALLLAESLAP--------VEPTGRVLARWQSSWLRYAPLSFS 174 A FEL+A+ + VP LRA LLA +P EP + W W+RYAP S + Sbjct 146 AAKFELNALSTGLVPDLRAALLARQPSPEVEHTAVTQEPAVTEIGHWTPGWVRYAPFSVT 205 Query 175 GLVMIGAVIGLGYQTGLAVRLPESGFARSAVDAAQR-AGVVLVVAVTVLLVVGVSALLAV 233 G+V I A++GL +Q G+ ++ S +++A+R V VV +++L++ SAL V Sbjct 206 GVVTIAAIVGLAFQYGIGAKIARSSTVAEGIESAERVGIAVAVVVGSIVLLIAASALACV 265 Query 234 LFSWLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGAR 293 + LTYGN+ L G LH+ HGLL+ R+ T D RLRG TL+EPLL+RL GAR Sbjct 266 RY-LLTYGNMTLTDNGR----TLHVSHGLLKTRQTTLDRARLRGTTLKEPLLLRLAGGAR 320 Query 294 LDAVMTGVHGE-GQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRA 352 LDAVMTGV E +SS+LLP P A V+ +I + AA PL HGP AARRR+TRA Sbjct 321 LDAVMTGVSAERRESSLLLPQAPRAEAERVMATVIGDHRQAAVPLTAHGPVAARRRYTRA 380 Query 353 LLVPTL----AGVALIAAAPILGVPGWAWTLWA---VLTAGCAGLAVDRVRSLGHRVADG 405 L+ + A V LI P+ W +WA L G LA DR R LGH V G Sbjct 381 LIPAEIALAVALVFLIVDRPVF------WAVWAGIVALAVGGVALAWDRYRGLGHAVLPG 434 Query 406 WLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAEL 465 WL+ +GSL R RD + GIIGWTVRQT FQRRAGVAT++AAT AG Y V+D+PA+ Sbjct 435 WLITGSGSLDRARDSLEADGIIGWTVRQTFFQRRAGVATVIAATPAGTGKYLVIDLPADQ 494 Query 466 AWSVAGAASPWVADSVWLR 484 AWS+ + +P D VW R Sbjct 495 AWSLIESVTPGGGD-VWAR 512 >gi|111022905|ref|YP_705877.1| hypothetical protein RHA1_ro05942 [Rhodococcus jostii RHA1] gi|110822435|gb|ABG97719.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=513 Score = 383 bits (983), Expect = 5e-104, Method: Compositional matrix adjust. Identities = 233/493 (48%), Positives = 312/493 (64%), Gaps = 20/493 (4%) Query 6 HDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVLRWFFT 65 W RL RMLLVHPV E+++ LPVL+ S+V+G+ +GN VW L A+ V VVFG+ RWF T Sbjct 26 QPWLRLDRRMLLVHPVDEIVKLLPVLLISLVIGTQSGNHVWSLVAIVVFVVFGISRWFTT 85 Query 66 TYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEARGE-- 123 +YRI +V LR G+ +R +SVPRNRIRSV EA +LHRLLGL+++R+GTGQ+ + Sbjct 86 SYRIGPVHVQLRQGLFRKRLLSVPRNRIRSVDVEAGVLHRLLGLSIVRIGTGQQVGSKPD 145 Query 124 -AAFELDAVDSARVPRLRALLLAESLAP-VEPTG-------RVLARWQSSWLRYAPLSFS 174 A FEL+A+ + VP LRA LLA +P VEPT + W +W+RYAP S + Sbjct 146 AAKFELNALSTGLVPDLRATLLARQPSPDVEPTAVAQEPAVTEIGHWTPAWVRYAPFSVT 205 Query 175 GLVMIGAVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVL 234 G+V I A++GL +Q G+ ++ S +++A+R GV + V V +++++ ++ LA + Sbjct 206 GVVTIAAIVGLAFQYGIGAKIARSSTVAEGIESAERVGVAIAVVVGIVVLLIAASALACI 265 Query 235 FSWLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARL 294 LTYGN+ L G LH+ HGLL+ R+ T D RLRG TL EPLL+RL GARL Sbjct 266 RYLLTYGNMTLTDTGR----TLHVSHGLLKTRQTTLDRARLRGTTLEEPLLLRLAGGARL 321 Query 295 DAVMTGVH-GEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRAL 353 DAVMTGV +SS+LLP P A V+ +I + AA PL HGP A RRR+TRA Sbjct 322 DAVMTGVSAARRESSLLLPQAPRAEAERVMATVIGDHRQAAAPLTSHGPVAQRRRYTRA- 380 Query 354 LVPTLAGVALIAAAPILGVPGWAWTLWAVLTAGCAG--LAVDRVRSLGHRVADGWLVARA 411 L+P +A+ IL P + A++ G LA DR R LGH V GWL+ R+ Sbjct 381 LIPAEIALAVALVFVILDRPVFWAAWAAIVALAVGGVVLAWDRYRGLGHAVLPGWLITRS 440 Query 412 GSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAG 471 GSL R RD + GIIGWTVRQ+ FQRRAGVAT++AAT AG Y V+D+PA+ AWS+ Sbjct 441 GSLDRARDSLEADGIIGWTVRQSFFQRRAGVATIIAATPAGTGKYLVIDLPADQAWSLVE 500 Query 472 AASPWVADSVWLR 484 + +P D VW R Sbjct 501 SVTPGGGD-VWAR 512 >gi|312138845|ref|YP_004006181.1| integral membrane protein [Rhodococcus equi 103S] gi|311888184|emb|CBH47496.1| putative integral membrane protein [Rhodococcus equi 103S] Length=510 Score = 367 bits (942), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 240/495 (49%), Positives = 311/495 (63%), Gaps = 26/495 (5%) Query 8 WHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVLRWFFTTY 67 W RL RMLLVHPV+E+++ LPV+ S ++GS++GN W L + V +GVLRW TTY Sbjct 21 WLRLDKRMLLVHPVNEVVKLLPVIAVSWIVGSSSGNHYWGLIVVAALVAYGVLRWVTTTY 80 Query 68 RIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA-RGEAAF 126 RI +V LR G+ ++ +SVPRNRIRSV EAR+LHRLLGL VLR+GTG+ + R E F Sbjct 81 RIGPVHVQLRRGVFQKKVLSVPRNRIRSVDVEARVLHRLLGLAVLRIGTGRHSGRDEEKF 140 Query 127 ELDAVDSARVPRLRALLLA-ESLAPVEP--------TGRVLARWQSSWLRYAPLSFSGLV 177 ELDA+D + VP LRA LL+ P P G + W +W+RYAP S +GLV Sbjct 141 ELDALDVSLVPDLRAALLSGHGQHPDRPDADSAPDREGAEIGHWTPAWVRYAPFSVTGLV 200 Query 178 MIGAVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGV---SALLAVL 234 IGA++G+ +Q GL + S VD+AQ+AG +++ + L VG+ +++LA + Sbjct 201 AIGALVGIVFQYGLVDSIARSPAFEEGVDSAQQAGALVLAVLGFLAFVGLFLAASVLACV 260 Query 235 FSWLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARL 294 + YG + + G LH+ HGLLR R+ T D +RLRG TL+EPLL+RL GA L Sbjct 261 RYLVVYGRMTVTDTGR----TLHVSHGLLRTRQTTLDRQRLRGTTLKEPLLLRLAGGASL 316 Query 295 DAVMTGVHGEG-QSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRAL 353 DA+MTGV E +SS+LLP P A V+ ++ + A PL HGPAA RRR+TRAL Sbjct 317 DAIMTGVSAEHRESSLLLPQSPRAEAMRVMATVLGDDRQAETPLALHGPAARRRRYTRAL 376 Query 354 LVPTLAGVALIAAAPIL-GVPGWAWTLWA---VLTAGCAGLAVDRVRSLGHRVADGWLVA 409 +A +A A VP W +WA VL AGLA DR R LGH V GWLV Sbjct 377 WPAVVAALAAAGVAVAGRDVP---WPVWAGVVVLAVAGAGLARDRYRGLGHAVLPGWLVT 433 Query 410 RAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSV 469 R+GSL RRRD +A GIIGWTVRQT FQRRAGVAT++AAT AG Y V D+PAE AW++ Sbjct 434 RSGSLDRRRDSLAAEGIIGWTVRQTFFQRRAGVATVIAATPAGTGRYVVHDLPAEQAWAL 493 Query 470 AGAASPWVADSVWLR 484 A +P A +WLR Sbjct 494 VDAVTPG-AGGIWLR 507 >gi|325676453|ref|ZP_08156131.1| membrane protein [Rhodococcus equi ATCC 33707] gi|325552631|gb|EGD22315.1| membrane protein [Rhodococcus equi ATCC 33707] Length=510 Score = 365 bits (937), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 236/495 (48%), Positives = 309/495 (63%), Gaps = 26/495 (5%) Query 8 WHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVLRWFFTTY 67 W RL RMLLVHPV+E+++ LPV+ S ++GS++GN W L + V +GVLRW TTY Sbjct 21 WLRLDKRMLLVHPVNEVVKLLPVIAVSWIVGSSSGNHYWGLIVVAALVAYGVLRWVTTTY 80 Query 68 RIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA-RGEAAF 126 RI +V LR G+ ++ +SVPRNRIRSV EAR+LHRLLGL VLR+GTG+ + R E F Sbjct 81 RIGPVHVQLRRGVFQKKVLSVPRNRIRSVDVEARVLHRLLGLAVLRIGTGRHSGRDEEKF 140 Query 127 ELDAVDSARVPRLRALLLA---------ESLAPVEPTGRVLARWQSSWLRYAPLSFSGLV 177 ELDA+D + VP LRA LL+ ++ + + G + W +W+RYAP S +GLV Sbjct 141 ELDALDVSLVPDLRAALLSGHGQHPDRPDTDSAPDREGAEIGHWTPAWVRYAPFSVTGLV 200 Query 178 MIGAVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGV---SALLAVL 234 IGA++G+ +Q GL + S VD+AQ+AG +++ + L VG+ +++LA + Sbjct 201 AIGALVGIVFQYGLVDSIARSPAFEEGVDSAQQAGALVLAVLGFLAFVGLFLAASILACI 260 Query 235 FSWLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARL 294 + YG + + G LH+ HGLLR R+ T D +RLRG TL+EPLL+RL GA L Sbjct 261 RYLVVYGRMTVTDTGR----TLHVSHGLLRTRQTTLDRQRLRGTTLKEPLLLRLAGGASL 316 Query 295 DAVMTGVHGEG-QSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRAL 353 DA+MTGV E +SS+LLP P A V+ ++ + A PL HGPAA RRR+ RAL Sbjct 317 DAIMTGVSAEHRESSLLLPQSPRAEAMRVMATVLGDDRQAETPLALHGPAARRRRYIRAL 376 Query 354 L-VPTLAGVALIAAAPILGVPGWAWTLWA---VLTAGCAGLAVDRVRSLGHRVADGWLVA 409 A A A VP W +WA VL AGLA DR R LGH V GWLV Sbjct 377 WPAVVAALAAAGVAVAGRDVP---WPVWAGVVVLAVAGAGLARDRYRGLGHAVLPGWLVT 433 Query 410 RAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSV 469 R+GSL RRRD +A GIIGWTVRQT FQRRAGVAT++AAT AG Y V D+PAE AW++ Sbjct 434 RSGSLDRRRDSLAAEGIIGWTVRQTFFQRRAGVATVIAATPAGTGRYVVHDLPAEQAWAL 493 Query 470 AGAASPWVADSVWLR 484 A +P A +W R Sbjct 494 VDAVTPG-AGGIWRR 507 >gi|333921029|ref|YP_004494610.1| hypothetical protein AS9A_3369 [Amycolicicoccus subflavus DQS3-9A1] gi|333483250|gb|AEF41810.1| Hypothetical membrane protein [Amycolicicoccus subflavus DQS3-9A1] Length=545 Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 210/501 (42%), Positives = 287/501 (58%), Gaps = 32/501 (6%) Query 3 DRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVLRW 62 D W +L PRMLLV P+ + +R LP +I + +G+ TGNP W L V + W Sbjct 41 DEAVPWKQLDPRMLLVKPITQGVRALPAIIVPLFVGAQTGNPTWILVGAAAFVYVAGIDW 100 Query 63 FFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQ-EAR 121 T YR+ +V L+TG++SR +S+PR+RIRSV A ++HRLL L VLR+GTGQ Sbjct 101 LMTRYRVGPVHVQLKTGLISRNVLSIPRSRIRSVDVRATVMHRLLRLAVLRIGTGQGSGA 160 Query 122 GEAAFELDAVDSARVPRLRALLLAE--------SLAPVEP----------------TGRV 157 G ++FELDA+ ++ V LR LLA AP EP G Sbjct 161 GTSSFELDAIAASDVDALREQLLAGVRGDEAQIEGAPQEPGESPDTSHDGLPTLRDPGPE 220 Query 158 LARWQSSWLRYAPLSFSGLVMIGAVIGLGYQTG-LAVRLPESGFARSAVDAAQRAGVVLV 216 LA W W YAP F+G+++I A +GL +Q+G + RL S F + + + +L Sbjct 221 LAHWSPKWTWYAPFGFTGVLIILAGLGLIFQSGAVYERLLNSDFITESANTVRDLNPILA 280 Query 217 VAVTVLLVVGVSALLAVLFSWLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLR 276 V V+L++ +++L+A+ +LTY L G L +RHGLL RE T D RRLR Sbjct 281 GTVAVVLLIVLASLIAMTRYFLTYSGFTLHDDGR----TLRVRHGLLNTRESTLDRRRLR 336 Query 277 GATLREPLLVRLLRGARLDAVMTGV-HGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAG 335 G T+ P+L+R + GAR A+MTG+ G G+SS++LP P A V ++ + A Sbjct 337 GVTVENPILLRFVGGARARAIMTGLRDGSGESSLILPDAPRRRALEVFGAVLHDDALAQV 396 Query 336 PLRRHGPAAARRRWTRALLVPTLAGVAL-IAAAPILGVPGWAWTLWAVLTAGCAGLAVDR 394 PLRRHGP A +RR RAL +P +A AL + A + +P W W L A + A L +DR Sbjct 397 PLRRHGPKALQRRLFRALALPVVAIAALLVVNAAFVSLPRWVWFLAAAVFVLSALLGIDR 456 Query 395 VRSLGHRVADGWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGRK 454 R LGH GWL+ ++GSL R RDC+A GIIGWTV QT FQRRAG+AT+ AAT AG Sbjct 457 YRGLGHATVPGWLICQSGSLIRARDCVAAQGIIGWTVTQTFFQRRAGLATVTAATPAGSG 516 Query 455 GYQVLDVPAELAWSVAGAASP 475 GY V D+PA+ AW + A +P Sbjct 517 GYFVEDMPAKDAWDLIEAVTP 537 >gi|226307673|ref|YP_002767633.1| hypothetical protein RER_41860 [Rhodococcus erythropolis PR4] gi|226186790|dbj|BAH34894.1| conserved hypothetical membrane protein [Rhodococcus erythropolis PR4] Length=523 Score = 340 bits (871), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 233/493 (48%), Positives = 321/493 (66%), Gaps = 23/493 (4%) Query 8 WHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVLRWFFTTY 67 W RL RMLLVHPV+E+++ LPVL+ SVVLGS +GN W L + + VVFG+LR+F TTY Sbjct 32 WLRLDRRMLLVHPVNEVVKLLPVLLVSVVLGSQSGNHWWGLGVVTLLVVFGLLRYFTTTY 91 Query 68 RIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA---RGEA 124 RI +V LRTG+ ++ +SVPR+RIRSV EA ++HRLLGL+++R+GTGQ A Sbjct 92 RIGPVHVQLRTGVFQKKLLSVPRSRIRSVDVEAGVMHRLLGLSIVRIGTGQRAGIGHDSN 151 Query 125 AFELDAVDSARVPRLRALL---------LAESLAPV----EPTGRVLARWQSSWLRYAPL 171 FEL+A+ +A VP LRA L L PV EP + W+ SW+RYAP Sbjct 152 KFELNALSTALVPDLRAALLAGAQQARRLETPGTPVENIAEPVDTEIGHWEPSWVRYAPF 211 Query 172 SFSGLVMIGAVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALL 231 SF+G+ +I A+IG+ +Q G+ + +S + D+ + G+ L+V + +++++ +S+ L Sbjct 212 SFTGIAIIAAIIGISFQYGIGTAVAKSSAVSDSFDSLESLGIALMVVIALVVLLVLSSAL 271 Query 232 AVLFSWLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRG 291 A + + +GN+ L G +LH+ HGLL+ R+ T D RLRG TL+EPLL+RL RG Sbjct 272 ACVQYLIAFGNMKLTDNGR----ILHVSHGLLKTRQTTLDRARLRGTTLKEPLLLRLARG 327 Query 292 ARLDAVMTGVHGE-GQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWT 350 ARLDA+MTGV E +SS+LLP P A V+ +I ++ A+ PL HGPAA RRR+T Sbjct 328 ARLDAIMTGVSAEKKESSLLLPQGPRREAERVMATVIGDSRQASAPLIPHGPAARRRRYT 387 Query 351 RALLVPTLAGVALIA-AAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVA 409 RAL + T+A + +A AA L VP +AW AVL A LA DR LGH V GWL+ Sbjct 388 RALFLATVAFLVCVACAASGLDVPIYAWFGVAVLAIAGAVLAYDRYNGLGHAVLPGWLIT 447 Query 410 RAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSV 469 R+GSL R+R + G+IGWTVR+T FQRRAGVAT++AAT AG Y+V+D+PAE AW++ Sbjct 448 RSGSLDRQRHSLESEGVIGWTVRETFFQRRAGVATVIAATPAGTGSYEVIDLPAENAWAL 507 Query 470 AGAASPWVADSVW 482 A +P D VW Sbjct 508 IEAVTPGGGD-VW 519 >gi|229493904|ref|ZP_04387676.1| bacterial membrane flanked domain protein [Rhodococcus erythropolis SK121] gi|229319181|gb|EEN85030.1| bacterial membrane flanked domain protein [Rhodococcus erythropolis SK121] Length=523 Score = 339 bits (870), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 232/493 (48%), Positives = 318/493 (65%), Gaps = 23/493 (4%) Query 8 WHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVLRWFFTTY 67 W RL RMLLVHPV+E+++ LPVL+ SVVLGS +GN W L + + V+FG+LR+F TTY Sbjct 32 WLRLDRRMLLVHPVNEVVKLLPVLLVSVVLGSQSGNHWWGLGVVTLLVIFGLLRYFTTTY 91 Query 68 RIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA---RGEA 124 RI +V LRTG+ ++ +SVPR+RIRSV EA ++HRLLGL+++R+GTGQ A Sbjct 92 RIGPVHVQLRTGVFQKKLLSVPRSRIRSVDVEAGVMHRLLGLSIVRIGTGQRAGSGHDSN 151 Query 125 AFELDAVDSARVPRLRALL---------LAESLAPV----EPTGRVLARWQSSWLRYAPL 171 FEL+A+ +A VP LRA L L PV EP + W+ SW+RYAP Sbjct 152 KFELNALSTALVPDLRAALLAGAQQARRLETPGTPVESITEPVDTEIGHWEPSWVRYAPF 211 Query 172 SFSGLVMIGAVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALL 231 SF+G+ +I A+IG+ +Q G+ + +S + D+ + G+ L+V + +++++ +S+ L Sbjct 212 SFTGIAIIAAIIGISFQYGIGTAVAKSSAVSDSFDSLESLGIALMVVIALVVLLVLSSAL 271 Query 232 AVLFSWLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRG 291 A + + +GN+ L G +LH+ HGLL+ R+ T D RLRG TL+EPLL+RL RG Sbjct 272 ACVQYLIAFGNMKLTDNGR----ILHVSHGLLKTRQTTLDRARLRGTTLKEPLLLRLARG 327 Query 292 ARLDAVMTGVHGE-GQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWT 350 ARLDA+MTGV E +SS+LLP P A V+ +I ++ A+ PL HGPAA RRR+T Sbjct 328 ARLDAIMTGVSAEKKESSLLLPQGPRREAERVMATVIGDSRQASAPLIPHGPAARRRRYT 387 Query 351 RALLVPTLAGVALIA-AAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVA 409 RAL + +A + +A AA L VP +AW AVL G LA DR LGH V GWL+ Sbjct 388 RALFLAAVAFLVCVACAASGLDVPIYAWFGVAVLAIGGTALAYDRYNGLGHAVLPGWLIT 447 Query 410 RAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSV 469 R GSL R+R + G+IGWTVR+T FQRRAGVAT+VAAT AG Y+V+D+PAE AW + Sbjct 448 RNGSLDRQRHSLESEGVIGWTVRETFFQRRAGVATVVAATPAGTGSYEVIDLPAENAWEL 507 Query 470 AGAASPWVADSVW 482 A +P D VW Sbjct 508 IEAVTPGGGD-VW 519 >gi|296268838|ref|YP_003651470.1| hypothetical protein Tbis_0853 [Thermobispora bispora DSM 43833] gi|296091625|gb|ADG87577.1| membrane-flanked domain protein [Thermobispora bispora DSM 43833] Length=609 Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 211/555 (39%), Positives = 287/555 (52%), Gaps = 90/555 (16%) Query 8 WHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNP--VWPLAALGVTVVFGVLRWFFT 65 W RLSPRMLL+HPV E++R P L+G ++ GS++GNP VW L + V++GVLRWF T Sbjct 25 WRRLSPRMLLIHPVQEVVRMAPALLGLLIAGSSSGNPGMVWSLCGVAAVVLYGVLRWFTT 84 Query 66 TYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEARGEAA 125 TYR+ E+V LR G++ R+ ++VPR+RIR+V + LHR+LGL + +GTG+ A Sbjct 85 TYRLTPEHVRLRKGVVLRKVLTVPRDRIRTVDITSPPLHRMLGLARVEIGTGRSGI-SAG 143 Query 126 FELDAVDSARVPRLRALLL-------------------------AES-----LAPVEPTG 155 LD++ + RLR LL AES AP TG Sbjct 144 LTLDSLSAEEAARLRVELLHRRGTAGGETRPAAGAAPTVATGPAAESGQTVATAPAPQTG 203 Query 156 --------------RVLARWQSSWLRYAPLSFSGLVMIGAVIGLGYQTGLAVRLPESGFA 201 +LA + W+R+AP + SGLV IG ++ F+ Sbjct 204 PPAGEAASSPGPGETLLAELRPGWVRFAPFTMSGLVAIGVFATFVWRL----------FS 253 Query 202 RSAVDAAQRAGVVLV-------VAVTVLLVVGVSALLAVLFSWLTYGNLLL--RRGGSGQ 252 VD +R G V + +T LV+GV A + ++ T+G L R + Sbjct 254 EWGVDV-RRVGPVREGWHWFSGLGLTSQLVIGVPAFVVIVAIASTFGYLFAFWRFRLTRH 312 Query 253 EGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTGVH-GEGQSSMLL 311 +G LH+ GLL R T + RRLRG + E L +R + GA L AV TG++ G +S LL Sbjct 313 DGTLHVTRGLLTNRATTIEERRLRGVRISEFLTLRAVGGATLTAVTTGLNQGSQRSGALL 372 Query 312 PPCPFETATAVLTDLIDNTDAAA-----------------GPLRRHGPAAARRRWTRALL 354 PP P A V +ID AA PL RHG AA RRR+TRA Sbjct 373 PPAPRAEAERVAALVIDGKAQAASRSGPPGPAAAGPSPVTAPLVRHGRAACRRRFTRAFG 432 Query 355 VP--TLAGVALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAG 412 LAG+A++ +L P W L A LAVDR RSLGH + G LV R+G Sbjct 433 AHGLALAGLAVLWHTEVL--PLWPLIAGVALLPVTALLAVDRYRSLGHTLVRGHLVTRSG 490 Query 413 SLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGA 472 S++R+R + C GIIGWT+R++LFQRRAG+ TL A T AG + Y V DV A + G Sbjct 491 SIRRQRVVLECDGIIGWTIRRSLFQRRAGLCTLTATTAAGDQSYAVPDVELGEALRLIGE 550 Query 473 ASPWVADSVWLRHGS 487 ASP + D +LR+G+ Sbjct 551 ASPGLLDP-FLRYGT 564 >gi|54026728|ref|YP_120970.1| hypothetical protein nfa47540 [Nocardia farcinica IFM 10152] gi|54018236|dbj|BAD59606.1| putative membrane protein [Nocardia farcinica IFM 10152] Length=547 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 221/521 (43%), Positives = 285/521 (55%), Gaps = 57/521 (10%) Query 1 MTDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL 60 TDRP W RL RMLLV+PV+E+++ +PVLIGSV+LG+++GN W L L + V + + Sbjct 5 QTDRP--WSRLDRRMLLVYPVNEVVKFIPVLIGSVILGTSSGNHGWSLVPLALIVGYALS 62 Query 61 RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEA 120 RWF TTYR+ +V LRTG+L RR +SVPR+RIRSV EA LLHR+LGL V+ VGTGQ A Sbjct 63 RWFTTTYRVGPTHVELRTGLLQRRTLSVPRSRIRSVDIEADLLHRVLGLAVVVVGTGQAA 122 Query 121 RGEAAFELDAVDSARVPRLRALLLAESLA--PVE----------PTGRVLARWQSSWLRY 168 F LD++ +A P LRA LLA + P E P GR + WQ +W+RY Sbjct 123 DSGEKFRLDSLAAATAPALRAELLAHTAEQVPAEGDSAVPTTRAPQGREIGHWQPAWVRY 182 Query 169 APLSFSGLVMIGAVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVS 228 APLS +G ++ ++GL +Q GL + S A AV+ A VVL+ + VV + Sbjct 183 APLSLTGFAVVAPIVGLAFQFGLGEVVITSETAH-AVEGRAVAVVVLIGLAVLACVVVLV 241 Query 229 ALLAVLFSWLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRL 288 +L A TY L + G LHL HGL R+ T D+ R RGAT+ EPLL+RL Sbjct 242 SLAACARYLSTYFGLRVLDTGR----TLHLSHGLFTTRQITLDLARFRGATVNEPLLLRL 297 Query 289 LRGARLDAVMTGVHGEGQSSMLLPPCPFETATAVLTDLIDN------------------- 329 A L+AVM GE +LP P L +L+ + Sbjct 298 AGAAELEAVMV---GENPRQKILPQAPRAAVERTLAELLGSRHLSTVSAEMPAAPAKAPA 354 Query 330 -------TDAAAGPLRRHGPAAARRRWTRALLVPTLAGVALIAAAPILGVPGWAWTLWAV 382 T + PL HGP A RRR + P A + A P G AW A Sbjct 355 PEVASPGTAQLSAPLTPHGPVARRRR-YVRAIAPVAGLAAALFALPTFGWAAGAWWWLAP 413 Query 383 LTAGCAGLAV--DRVRSLGHRV------ADGWLVARAGSLQRRRDCIACTGIIGWTVRQT 434 LA+ DR R LGH V WL+ R+GSL R RDC+ GIIGWTVRQT Sbjct 414 AVLFLLALALAEDRYRGLGHTVLPRSGTGPAWLITRSGSLDRDRDCLEAPGIIGWTVRQT 473 Query 435 LFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASP 475 +QRRAG+AT+VAAT AG+K YQV+DVP AW++ AA+P Sbjct 474 FWQRRAGIATVVAATAAGKKAYQVVDVPLARAWAIIEAATP 514 >gi|119717734|ref|YP_924699.1| membrane-flanked domain-containing protein [Nocardioides sp. JS614] gi|119538395|gb|ABL83012.1| membrane-flanked domain [Nocardioides sp. JS614] Length=491 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 185/464 (40%), Positives = 253/464 (55%), Gaps = 11/464 (2%) Query 8 WHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNP-VW-PLAALGVTVVFGVLRWFFT 65 W R PRMLLV+PV E+ R LPV+IG+ V G+A+G P W L +GV V GVLR+ T Sbjct 9 WQRPDPRMLLVYPVKELGRFLPVVIGAFVAGTASGGPGTWLQLLGVGVPVALGVLRYVTT 68 Query 66 TYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEARGEAA 125 +YRI V LR G+L+R +S P +R+R+V+ A +HRLLGLT +R+GTG + E Sbjct 69 SYRIAQGRVELRRGLLNRHVLSTPLDRVRTVEVTAPPVHRLLGLTSVRIGTGTASSDEDD 128 Query 126 -FELDAVDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLSFSGLVMIGAVIG 184 +LD + + R RLRA LL P E + +W+RYAPL+ SGLV+ V+G Sbjct 129 HLDLDGLPAERARRLRADLLTAGTGPAEEAAVTVLDLDPAWVRYAPLTSSGLVLAAGVLG 188 Query 185 LGYQTGLA---VRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTYG 241 L Q + +R+ + D + + V + VL +V ALL++ ++ Sbjct 189 LASQVADSLGGIRVDTQWLS----DGPGGWSLWVAVPLGVLGLVAAVALLSIGGYVVSNW 244 Query 242 NLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTGV 301 L G G+ G HLR GLL RE T D RLRG + EP+ +RL AR A++TG+ Sbjct 245 GFRLTHTGPGRGGAWHLRRGLLTTRETTIDDVRLRGVVVGEPIGLRLAGAARASAIVTGL 304 Query 302 H-GEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAG 360 G S++L+PP P V D++ PL HGP A RR++RAL L Sbjct 305 DRGRSGSAVLVPPAPRAVVERVAGDVLRTAAPLDAPLAWHGPRARARRFSRALGPALLVA 364 Query 361 VALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDC 420 I + +P W L A+ LA DR +LGH + DG V R+GSL RRR+ Sbjct 365 AVAIVLTAVADLPLWLPVLAALGLPVAVLLAADRSAALGHALVDGHFVVRSGSLDRRREA 424 Query 421 IACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAE 464 + G+IGW +R T FQRRAG+ +LVA T GR+ LDVP E Sbjct 425 LEVDGVIGWNLRSTWFQRRAGLTSLVATTAGGRQSVAALDVPEE 468 >gi|256375205|ref|YP_003098865.1| membrane-flanked domain-containing protein [Actinosynnema mirum DSM 43827] gi|255919508|gb|ACU35019.1| membrane-flanked domain protein [Actinosynnema mirum DSM 43827] Length=516 Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 202/496 (41%), Positives = 270/496 (55%), Gaps = 50/496 (10%) Query 7 DWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL------ 60 DWHRL RM++V P++E++ +PVLIG +VLG+ G W +GV++ VL Sbjct 34 DWHRLDARMVVVRPLNEIIGLVPVLIGLLVLGNGDG---W---RVGVSIAVVVLVVALGV 87 Query 61 -RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTG-Q 118 W T YRI E V LRTG+ R+ ++VPR+RIRSV A+L HRL GL+ +R+GTG + Sbjct 88 LNWVTTRYRITPEQVELRTGLFVRKRLAVPRDRIRSVDLTAKLGHRLFGLSAVRLGTGSR 147 Query 119 EARGEAAFELDAVDSARVPRLRALLLA----------ESLAPVEPTGRVLARWQSSWLRY 168 + GE LDAV SA RLR LLL E PVEP G LA WLRY Sbjct 148 DQPGEDGLTLDAVTSAEGERLRVLLLDHAPRTGRSPDEGPRPVEP-GTTLAELDVRWLRY 206 Query 169 APLSFSGLVMIGAVIGL--GYQTGLAVRLPESGFARSAVDAAQ------RAGVVLVVAVT 220 APL+ SGLV IGA+ G+ + L + + + AVDAA A + V + Sbjct 207 APLTLSGLVGIGALFGVVVNFARELDIEVLDP-----AVDAAHWVVGQPLAQTIAVSVLV 261 Query 221 VLLVVGVSALLAVLFSWLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATL 280 V ++ + ALL L+ +G L R G + +R GLL R + +RLRG + Sbjct 262 VAVLSTLGALL--LYVLQFWGYRLTRE----PNGTVRVRRGLLTTRSVSLAEQRLRGVEV 315 Query 281 REPLLVRLLRGARLDAVMTGVHGEGQSSMLLPPCPFETATAVLTDLID-NTDAAAGPLRR 339 +E LL+R RGA+ AV TG+ +G+SS+LLPP P A V ++++ PLR Sbjct 316 QEALLLRAGRGAKAVAVTTGLGSKGESSLLLPPAPRAEAHRVTSEVLRVEAPPTTAPLRG 375 Query 340 HGPAAARRRWTRALLVPTLAGVALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLG 399 H AA RRR RA+ ++ AA ++ P WAW L A + DR RSLG Sbjct 376 HPAAALRRRVVRAV-----GPALVLVAALVVWAPSWAWQAALPLVPLAALVGWDRYRSLG 430 Query 400 HRVADGWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVL 459 H + D +LV R+GSL R + TGIIGW VR+T FQRRAG+ T+VA T AG Y V+ Sbjct 431 HALTDRYLVVRSGSLLRETVALQRTGIIGWRVRRTFFQRRAGLVTVVATTAAGDGHYAVV 490 Query 460 DVPAELAWSVAGAASP 475 DV +VA A P Sbjct 491 DVGEADGLAVADEAVP 506 >gi|317126482|ref|YP_004100594.1| membrane-flanked domain [Intrasporangium calvum DSM 43043] gi|315590570|gb|ADU49867.1| membrane-flanked domain [Intrasporangium calvum DSM 43043] Length=505 Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 190/497 (39%), Positives = 251/497 (51%), Gaps = 38/497 (7%) Query 7 DWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLG-SATGNPVWPLAALGVTVVFGVLRWFFT 65 +W RL RMLL+HP+ +L+ LP ++ V A + W L AL V V FG+LRW T Sbjct 12 EWRRLDKRMLLIHPLQTLLQALPAILAIFVARIGAEDSDRWELLALPVIVAFGLLRWLTT 71 Query 66 TYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEARGEAA 125 YRI E + L+ G+L ++ + +++R+V A+L HR LGL + + TG + G+ Sbjct 72 RYRISSEQIELKHGLLHKQTRTARLDKVRTVDLTAQLHHRALGLAKVEISTG--SGGKDR 129 Query 126 FELDAVDSARVPRLRALLL----------AESLAPVEPT---------------GRVLAR 160 LD++ A RLR LL A AP P L R Sbjct 130 LVLDSLSIAEGRRLRGELLHRLGAGDPVTATLPAPTGPAVDMEAPPPGTEAAGADEDLLR 189 Query 161 WQSSWLRYAPLSFSGLVMIGAVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVT 220 SW+R+AP + +G+ A+ G Q GL R E G + R L V Sbjct 190 LDPSWVRFAPFTMTGIGTAAAIFGFVSQ-GLG-RFSEQGDLYESGATWVRE---LAWWVN 244 Query 221 VLLVVGVSALLAVLFSWLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATL 280 +L VV + +LLAV L++ L R +G LH R GLL RE D R+RG L Sbjct 245 LLGVVVIVSLLAVGAYVLSFWGFRLSRSPTGS---LHTRRGLLTSREVGIDHTRVRGVEL 301 Query 281 REPLLVRLLRGARLDAVMTGVHGE--GQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLR 338 E L +RL G RL A+ TG+ GE G S L PP P + V T + + A + L Sbjct 302 GEQLGLRLAGGRRLKALSTGLQGEAGGGSDWLSPPAPVDVVAGVATLVTGDAGAVSDALI 361 Query 339 RHGPAAARRRWTRALLVPTLAGVALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSL 398 HGPAA RRR TRA+L+P AL + PGW AG L DR R L Sbjct 362 PHGPAAGRRRLTRAVLLPLALTAALALGWMVGDWPGWPLWFAPGSVAGAWLLGRDRYRGL 421 Query 399 GHRVADGWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQV 458 GH V D LV+R+GSL RRR +A G+IGW +RQ+ FQRRA V TLVA T AGR+ Y V Sbjct 422 GHLVTDRHLVSRSGSLDRRRILLARDGVIGWKIRQSFFQRRADVVTLVATTAAGRQHYDV 481 Query 459 LDVPAELAWSVAGAASP 475 +D+P + A+ V G SP Sbjct 482 VDLPPDRAYEVLGEVSP 498 >gi|319950847|ref|ZP_08024731.1| membrane-flanked domain-containing protein [Dietzia cinnamea P4] gi|319435502|gb|EFV90738.1| membrane-flanked domain-containing protein [Dietzia cinnamea P4] Length=559 Score = 236 bits (601), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 176/498 (36%), Positives = 266/498 (54%), Gaps = 33/498 (6%) Query 8 WHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVLRWFFTTY 67 W RLS RMLLV+P+ + R LP+ + S+ LGS N + + + + ++ GVLRW T+Y Sbjct 53 WERLSWRMLLVYPLGMLTRLLPLFLVSLWLGSNRSNYWFEIVIVSMVILGGVLRWLSTSY 112 Query 68 RIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEARGEAA-- 125 ++ ++ LR G SR+ V+V R RIRSV TE+ L HR+L ++++ VGTG+ G++ Sbjct 113 QVGRTHIILRKGFFSRQVVTVARQRIRSVDTESDLFHRVLRVSIVEVGTGRADSGKSDAE 172 Query 126 -FELDAVDSARVPRLRALLLAESLAPVEPT-------------GRVLARWQSSWLRYAPL 171 F LDA+D+A V LR LL A ++P+ G +A+W+ +W R+AP Sbjct 173 RFRLDAIDTALVEPLRDELLKHRRA-LDPSLSEEDEVQWGSKYGEDIAQWKVTWARFAPF 231 Query 172 SFSGLVMIGAVIGLGYQTG-LAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSAL 230 SF G ++ ++ + +Q G + R+ + + G + + V+ + Sbjct 232 SFIGFGVLFSLWLITWQMGDMHDRIMDLAVVEGTIAWLDSLGQPWAFVGKGVAIWAVAGV 291 Query 231 LAVLFSWLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLR 290 LAV+ + YG L G +L++++G+LR + D RLRG +R P+ +R+L Sbjct 292 LAVITYAIRYGKYALTDHGQ----LLYVQNGVLRRKHQALDKARLRGVEMRLPVYLRMLG 347 Query 291 GARLDAVMTGVHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWT 350 G RL+ +MTG +S LLP P + V ++ + PLRRH AARRR T Sbjct 348 GGRLEPIMTGTKKGATASTLLPQAPIKDVRRVAIRILGDPTPVTVPLRRHPWKAARRRIT 407 Query 351 RALL----VPTLAGVALIAAAPILGVPGWAWTLWAV--LTAGCAGLAVDRVRSLGHRVAD 404 R LL V L + I + P + W W + LA DR+R LGH + Sbjct 408 RGLLPFWIVAGLIVLVRIDSGPSADI----WVEWGIPAALVLFLLLAADRIRMLGHALLP 463 Query 405 GWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAE 464 G LV GS +R + GIIGWTV Q++FQR AGVAT+ AAT AG Y V+D+ A+ Sbjct 464 GMLVTSHGSWTAKRTILEADGIIGWTVTQSVFQRSAGVATVAAATPAGNGVYSVMDIDAD 523 Query 465 LAWSVAGAASPWVADSVW 482 AW++A A +P + D VW Sbjct 524 EAWALAEALTPGITD-VW 540 >gi|302529901|ref|ZP_07282243.1| predicted protein [Streptomyces sp. AA4] gi|302438796|gb|EFL10612.1| predicted protein [Streptomyces sp. AA4] Length=509 Score = 216 bits (550), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 166/481 (35%), Positives = 245/481 (51%), Gaps = 17/481 (3%) Query 8 WHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVLRWFFTTY 67 WHRL RMLL+ P ++++ LPVL+G++VLG LAA VT+ GV + Y Sbjct 20 WHRLDRRMLLIRPFLDLVKSLPVLVGALVLGHGNHWQWIGLAATAVTIGVGVSHCLTSRY 79 Query 68 RIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEARGEAAFE 127 R+ + TG+L R+ ++P +RIR+V + HRL L+ +R+GTG+ G+ + Sbjct 80 RVTATQIEWHTGLLLRKQRAIPLDRIRAVDVLSEPKHRLFSLSAVRIGTGRHDHGKGPGK 139 Query 128 ----LDAVDSARVPRLRALLLAESLAPVE---PTGRVLARWQSSWLRYAPLSFSGLVMIG 180 LDAV A RLR LLL A E P ++A W+RYAP + SGL ++ Sbjct 140 DQLVLDAVTRAEAQRLRTLLLHRKPAGPEAAHPPESLVAEVDKRWVRYAPFTLSGLAVVA 199 Query 181 AVIGLGYQTGLAVRLPESGFA--RSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWL 238 A++G Y + + F R A V L V + ++ + ++L+V L Sbjct 200 AILGTVYHFAHELHFDPTSFGPLRDLTARALEQPVWLTVVLAAAGLLVLVSVLSVGGYVL 259 Query 239 TYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVM 298 ++ N L R G LH+R GL+ R + + RLRG ++EPL +R++ GA+ AV Sbjct 260 SFWNFRLTREPGG---TLHIRRGLITTRSVSIEEDRLRGVEIKEPLPLRMVGGAKCVAVA 316 Query 299 TGV-HGEGQS---SMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRALL 354 G+ G+G +LLPP P A ++ +++ D A PL RH A RR TRA+ Sbjct 317 AGLREGKGADRGGGLLLPPAPAGKAREIVGEVLGE-DFANVPLVRHSRRALTRRITRAVF 375 Query 355 VPTLAGVALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSL 414 AL A A + +P W W VL + DR RSLGH + +LV R+GSL Sbjct 376 SVLALSAALFALARLEVLPEWPWQAALVLLPFAVLVGFDRYRSLGHAITGRYLVTRSGSL 435 Query 415 QRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAAS 474 R + + G V ++ FQRRAG+ T++A AGR Y+VLDV ++A A Sbjct 436 ARTTVAVRRDRLTGIVVHRSFFQRRAGLVTVIAPVAAGRGHYRVLDVEEGAGLALADTAV 495 Query 475 P 475 P Sbjct 496 P 496 >gi|343927650|ref|ZP_08767118.1| hypothetical protein GOALK_097_00710 [Gordonia alkanivorans NBRC 16433] gi|343762291|dbj|GAA14044.1| hypothetical protein GOALK_097_00710 [Gordonia alkanivorans NBRC 16433] Length=512 Score = 216 bits (549), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 179/502 (36%), Positives = 269/502 (54%), Gaps = 43/502 (8%) Query 3 DRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPL-AALGVTVVFGVLR 61 D P +WHR SP M+ V V + +PVLI V G + P+ L A + + + V+ Sbjct 23 DAPDEWHRQSPWMMAVTVVESLPSLIPVLIALVFAGRSA--PLLTLIATVVLVPLVTVVP 80 Query 62 WFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEAR 121 W T Y++ E+V +R+G+++++ + R+RIRSV A L+HR+L L + +GTG + + Sbjct 81 WLTTFYQVTAEHVRVRSGLITKKVATARRDRIRSVDLTASLVHRVLNLQKVTIGTGGDEQ 140 Query 122 GEAAFELDAVDSARVPRLRAL---------------LLAESLAPVEPTG--RVLARWQSS 164 + +L AV +P RAL E LAP P+ VL +Q++ Sbjct 141 A-SQVKLRAVT---LPEARALHDDLMPTAGTRSAAAASDEHLAPETPSAAPEVLTSFQNA 196 Query 165 WLRYAPLSFSGLVMIGAVIGLGYQTGLAVRLPESG--FARSAVDAAQRAGVVLVVAVTVL 222 WLRY+P S GL + AV+G+G Q + + G AR A+D + + LV+AV V+ Sbjct 197 WLRYSPFSMGGLAIAAAVVGIGVQIANDAGMFDEGVGLARDALDTVRSIPLALVIAVAVV 256 Query 223 LVVGVSALLAVLFSWLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLRE 282 V+ V ++L+V+ L+Y + L R +G L GLL ++D +R+RG+ L E Sbjct 257 AVILVGSVLSVVGYVLSYWDFRLTRH---PDGTLRTERGLLTTNAISFDEKRIRGSHLTE 313 Query 283 PLLVRLLRGARLDAVMTGVHGEGQSSMLLPPCPFETATAVLTDLI--DNTDAAAGPLRRH 340 P+L+R L+GARL A+ TG + +LLPP P A V DL+ + ++ AG L H Sbjct 314 PILMRPLKGARLQAIATGA---TKHPLLLPPAPISEAMRV-ADLVTHERSELTAG-LTGH 368 Query 341 GPAAARRRWTRALL--VPTLAGVALIAAAPILGVPGWAWTLWAVLT-AGCAGLAVDRVRS 397 G A RR R L + LAG+++ AA + VP W VL AG GLAV R R Sbjct 369 GRVAFIRRLNRGFLAGLVILAGISIAVAAGAIPVP---WIAVGVLALAGSIGLAVVRARH 425 Query 398 LGHRVADGWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQ 457 LGHR+ +V ++ R+R + G+IGW R ++FQRR GV TL+ AT AG + Y Sbjct 426 LGHRLTTRSVVIAPPTVARQRIVVDRDGVIGWASRSSVFQRRTGVCTLILATAAGSEHYS 485 Query 458 VLDVPAELAWSVAGAASP-WVA 478 ++DV A ++ +P WVA Sbjct 486 LVDVDEATAAAITADVTPDWVA 507 >gi|300789664|ref|YP_003769955.1| hypothetical protein AMED_7846 [Amycolatopsis mediterranei U32] gi|299799178|gb|ADJ49553.1| putative membrane protein [Amycolatopsis mediterranei U32] gi|340531328|gb|AEK46533.1| hypothetical protein RAM_40330 [Amycolatopsis mediterranei S699] Length=520 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 176/489 (36%), Positives = 254/489 (52%), Gaps = 29/489 (5%) Query 8 WHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWP---LAALGVTVVFGVLRWFF 64 WH L RMLL+ PV ++++ LPVL+G+++ G G P W L + V GV Sbjct 26 WHHLDRRMLLIRPVLDLVKSLPVLLGALLFGH--GEP-WQWIGLVFTAIAVFTGVSHVLT 82 Query 65 TTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEARGEA 124 + YRI + V RTG+L R+ ++PR+RIR+V + HRL L R+GTG+ + G+ Sbjct 83 SRYRITESQVEWRTGLLQRKQRAIPRDRIRTVDVTSEPKHRLFSLAAARIGTGRHSHGKG 142 Query 125 AFE----LDAVDSARVPRLRALLLAESLAPVEPTG-------RVLARWQSSWLRYAPLSF 173 + LDAV +A RLR LLL V +++A WLRYAP + Sbjct 143 PGKDELVLDAVTTAEAQRLRTLLLHRKTEAVAAATEAAAPPEQLIAAVDKRWLRYAPFTL 202 Query 174 SGLVMIGAVIGLGYQTGLAVRLPESGFA--RSAVDAAQRAGVVLVVAVTVLLVVGVSALL 231 SGL ++GAV+G Y + F+ ++ V V L + V + ++ + +LL Sbjct 203 SGLAVVGAVVGTVYHFAHELHFDPVQFSLVQAVVGHFADTPVWLSLVVAAVGLLVLVSLL 262 Query 232 AVLFSWLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRG 291 ++ L++ N L R +G LH+R GL+ R + + RLRGA +REPL +RL G Sbjct 263 SIGGYVLSFWNFRLTREPAG---TLHVRRGLITTRSVSIEEDRLRGAEIREPLPLRLAGG 319 Query 292 ARLDAVMTGVHGEGQS-----SMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAAR 346 AR A+ G+ EG+S S+LLPP P V+ +++ D A PL RH A Sbjct 320 ARCVAIAAGLR-EGKSADKGGSLLLPPAPLVRTHEVVAEVL-GEDPVATPLVRHPRRALY 377 Query 347 RRWTRALLVPTLAGVALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRVRSLGHRVADGW 406 RR +RA+L L AL A + +P W W VL A + DR R LGH + + Sbjct 378 RRLSRAVLGVLLLAAALYGLAWLGALPDWPWQAALVLVPFAALVGWDRYRGLGHALTGRY 437 Query 407 LVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELA 466 LV R+GSL R + C G+ G V ++ FQRRAG+ TL+A AG+ YQVLDV Sbjct 438 LVTRSGSLDRGTAAVRCDGLTGIVVERSYFQRRAGLVTLIAPVAAGKGKYQVLDVGEAAG 497 Query 467 WSVAGAASP 475 ++A A P Sbjct 498 LALADRALP 506 >gi|258653931|ref|YP_003203087.1| membrane-flanked domain-containing protein [Nakamurella multipartita DSM 44233] gi|258557156|gb|ACV80098.1| membrane-flanked domain protein [Nakamurella multipartita DSM 44233] Length=501 Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 182/484 (38%), Positives = 250/484 (52%), Gaps = 27/484 (5%) Query 15 MLLVHPVHEMLRQLPVLIGSVVLGSA-TGNPVWPLAALGVTVVFGVLRWFFTTYRIDDEN 73 MLLV PV E+LR +P+L ++ G+ + P W L V V G+ R+ T YRI Sbjct 1 MLLVEPVREILRFIPMLAVLIIAGAGRSDGPPWGLIGTAVVVALGIGRYLSTRYRITPTV 60 Query 74 VSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEARGEAAFELDAVDS 133 V +R G++ RR ++VPR+RIRS+ A L R+L L + +GTG E+ LD + + Sbjct 61 VEVRRGLVQRRHLTVPRDRIRSLDVSAHPLQRMLRLVRVDIGTGGRHAHESGVRLDGLPA 120 Query 134 ARVPRLRALLLAESLA---------PVEPTGR---VLARWQSSWLRYAPLSFSGLVMIGA 181 VP LRA LL A P +P G LAR + W+ AP + SG + Sbjct 121 GAVPALRAELLHRQTAATSADSGHPPDQPAGSPEVELARLRPGWIALAPATLSGAITGLV 180 Query 182 VIGLGYQTGLAVRLP--ESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLT 239 IG G++ RL E G R A+ Q V +A+ V V+ V +L+V ++ Sbjct 181 AIGFGFRLMREARLNPAEFGPVRQALGYLQGHSVGADIALAVAAVLLVVTVLSVAGYVVS 240 Query 240 Y-GNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVM 298 + G L R G G L + GLL R + + RRLRG REPL++R GARL AV Sbjct 241 FWGFRLSRHPG----GTLQVTRGLLTTRSTSIEERRLRGLQRREPLVLRWAHGARLHAVA 296 Query 299 TGV------HGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPAAARRRWTRA 352 TG+ G G S++++PP P V ++ + PL HGPAA RRR+ RA Sbjct 297 TGLRRSEGADGGGGSALVMPPAPTPDVLRVEAAVLGDERLVHTPLTAHGPAARRRRYLRA 356 Query 353 LLVPTLAGVALIAAAPILGVPGWAWTLWAVLTAGCAGLAV-DRVRSLGHRVADGWLVARA 411 L + L+AA G+P +W VL DR R+LGH + DG+LV R Sbjct 357 LGGALVVAAGLVAAHRWAGLPPLLAPVWVVLALAGGWALAADRARNLGHAIVDGYLVTRL 416 Query 412 GSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAG 471 GSL RRR +A GI+G TVR+T FQRRAG+ TL+A T AG + Y + D+PA A + G Sbjct 417 GSLHRRRTVLALEGIVGVTVRRTPFQRRAGLTTLIATTAAGSQHYDLPDLPAARAVELIG 476 Query 472 AASP 475 P Sbjct 477 VLVP 480 >gi|291300312|ref|YP_003511590.1| hypothetical protein Snas_2821 [Stackebrandtia nassauensis DSM 44728] gi|290569532|gb|ADD42497.1| membrane-flanked domain protein [Stackebrandtia nassauensis DSM 44728] Length=527 Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 165/478 (35%), Positives = 243/478 (51%), Gaps = 36/478 (7%) Query 28 LPVLIGSVVLGSATGNPVWPLAALGVTV----VFGVLRWFFTTYRIDDENVSLRTGILSR 83 +P L+ + V G G + PLA++ +T + ++++ TTYR+ E LR+G+ ++ Sbjct 35 IPFLVLTGVKGVILGVGI-PLASISLTFAVIWLVALMQYRTTTYRVTPERFELRSGVFAK 93 Query 84 RAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEARGEAAFELDAVDSARVPRLRALL 143 + SV R+RIR+V A HR++GL V+R+ +GQ + E ELDAV LR L Sbjct 94 KRHSVARDRIRAVDLTASPFHRVIGLVVVRISSGQHSSSENQLELDAVTKPVGAALRREL 153 Query 144 L-----------AESL-APVEPTGRVLARWQSSWLRYAPLSFSGLVMIGAVIG-----LG 186 L AES+ A ++ TG LAR + SWLR+APL+F L + G LG Sbjct 154 LHRKAHSPDVAGAESVGADIDDTGDELARLRLSWLRFAPLTFVSLALGFGAFGVAARFLG 213 Query 187 YQTGLAVRLPESG--FARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTYGNLL 244 LP + + + D +L VA + +VVG A A LF+ +G L Sbjct 214 DFGVNPTELPGATGLWEQLKTDPVLVGATILGVATVIAIVVGAIASTA-LFTEAWWGYRL 272 Query 245 LRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTGV--- 301 R + G L +R GLL R + + RLRG + EPL +R +GA L A+ TG+ Sbjct 273 DRE----EAGTLRVRRGLLTTRTTSLEEERLRGVDVVEPLPLRWAKGAYLKAIATGMTAS 328 Query 302 HGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLR--RHGPAAARRRWTRALL-VPTL 358 + LLPP P A V ++ +D A P R H AA +RR TRA++ + Sbjct 329 KKNQEQDTLLPPSPNTEAERVAAAVLRESDRVADPARLTAHSRAARQRRLTRAVVTIGVT 388 Query 359 AGVALIAAAPILGVPGWAWTLWAVLTAGCA-GLAVDRVRSLGHRVADGWLVARAGSLQRR 417 A V I + + W W +L A GLAVD R+LGH + +LV+R+G+L RR Sbjct 389 AAVLAIIQWQLGSIAAWGWLAVVLLLIPIAVGLAVDAYRNLGHAIRGRYLVSRSGTLTRR 448 Query 418 RDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASP 475 + GIIGWT+ Q++FQ+R+G+ T+ A T AGR Y+ D+ +A A P Sbjct 449 TAALRRDGIIGWTITQSVFQKRSGLLTVAATTAAGRGAYKTRDLTVGEGLDLADDAVP 506 >gi|296139056|ref|YP_003646299.1| membrane-flanked domain-containing protein [Tsukamurella paurometabola DSM 20162] gi|296027190|gb|ADG77960.1| membrane-flanked domain protein [Tsukamurella paurometabola DSM 20162] Length=511 Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 162/478 (34%), Positives = 236/478 (50%), Gaps = 37/478 (7%) Query 4 RPHD--WHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVLR 61 RP D W+RLSP + V + +P LIG LG G V + L ++V+ G+L Sbjct 3 RPDDRGWNRLSPWGIGTRVVRALPSLIPALIGVFFLGRTAGPTVIVIVGLVISVLVGLLP 62 Query 62 WFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEAR 121 W T +R+ D+ + LR G+L R + + R+RIRSV A + R+L L + VGTG + Sbjct 63 WLTTRWRVTDDQLELRHGLLRRVSATARRDRIRSVDVTAGPIERVLKLRKVEVGTGVGGK 122 Query 122 GEAAFELDAVDSARVPRLRALLLAESLAPVEPTGRV----------------LARWQSSW 165 E+A LD + +A +L LL S +P V LAR Q +W Sbjct 123 -ESALVLDPIPAALAEQLGHDLLRRSPVAADPETPVGDGAAAGPTPTVADEELARLQPAW 181 Query 166 LRYAPLSFSGLVMIGAVIGLGYQTGLAVRLPESG--FARSAVDAAQRAGVVLVVAVTVLL 223 LR+AP S +G ++ A G+G++ L E G A S + G +VV T++L Sbjct 182 LRFAPFSLTGFAVVAAGAGIGFRVVDEAGLRERGSEIAESWLVKILDLGAAVVVPGTIVL 241 Query 224 VVGVSALLAVL-FSWLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLRE 282 V+ +S L++VL + + +G L+RR +G LH GL+ T + +R+RG + E Sbjct 242 VLVLSTLISVLAYVFAFWGFRLVRR----SDGALHTSRGLVSTVAATIERKRVRGVQVHE 297 Query 283 PLLVRLLRGARLDAVMTGVHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGP 342 P+L+R+ GA+L A+ TG ++ LLPP P A V D++ A L HGP Sbjct 298 PVLMRIPGGAKLRAIATGTD---RNPSLLPPAPRSEAIRVADDVLGRPGAIETDLGPHGP 354 Query 343 AAARRRWTRALLVPTLAGVALIAAAPILGVPGWAWTLWAVLTAGCAGLAVD-----RVRS 397 AA +RR TRALL +GV + V AW L + A + R R+ Sbjct 355 AALKRRRTRALLA---SGVPAAVLVALAVVAPGAWWLLPAVGAVVLVVLAVPLAQVRYRN 411 Query 398 LGHRVADGWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKG 455 LG V +V A ++ R R + G+IG+ +T FQRRA V TL AT AG G Sbjct 412 LGTTVGADTVVLGAATVARTRTVLEFDGVIGFVTTETFFQRRARVLTLTVATAAGSFG 469 >gi|262203457|ref|YP_003274665.1| membrane-flanked domain-containing protein [Gordonia bronchialis DSM 43247] gi|262086804|gb|ACY22772.1| membrane-flanked domain protein [Gordonia bronchialis DSM 43247] Length=507 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 172/502 (35%), Positives = 248/502 (50%), Gaps = 38/502 (7%) Query 3 DRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL-R 61 D W RLSP + V PV ++ + +PVLI V G G P++ AA V+F L Sbjct 12 DESTPWRRLSPGTMAVKPVEQLPQLIPVLIAVVFAGR--GAPLFSFAATLALVIFVTLVP 69 Query 62 WFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEAR 121 W T Y++ + V +R+G+++R+ + R+RIRSV A +HRLL L + +GTG + Sbjct 70 WLTTRYQVTADRVQVRSGLITRKVATARRDRIRSVDVTAGPVHRLLRLAKVSIGTGGD-N 128 Query 122 GEAAFELDAVDSARVPRLRALLLAESLAPVEPTGR----------------VLARWQSSW 165 A +L+A+ +A L L+A AP P G VL R++ W Sbjct 129 DSATVKLNALSAADARLLHGTLMAT--APRTPVGATTSSDGGAVERTTPPAVLTRFRPGW 186 Query 166 LRYAPLSFSGLVMIGAVIGLGYQTGLAVRLPESGF--ARSAVDAAQRAGVVLVVAVTVLL 223 L Y+P S +GL A +G+G Q L E G A A +A + V+++VAV V+ Sbjct 187 LVYSPFSLAGLATAAAALGVGAQIANEADLFERGVGTAERAAEALRDIPVLIIVAVAVVT 246 Query 224 VVGVSALLAVLFSWLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREP 283 +V V A+L+V+ L+Y N L R +G L GLL ++D R+RG L EP Sbjct 247 IVLVGAVLSVVGYILSYWNFSLTRHA---DGTLRTERGLLTTTAVSFDESRIRGTHLHEP 303 Query 284 LLVRLLRGARLDAVMTGVHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPA 343 +L+R + GARL + G + +LLPP P + A V + PL HG A Sbjct 304 VLMRPVHGARLHGIAIG---GVKHPLLLPPAPVDEAIRVGNLVAREGRELTMPLTPHGRA 360 Query 344 AARRRWTRALLVPTLAGVALIAAAPILGV---PGWAWTLWAVLTAGCAGLAVDRVRSLGH 400 A RR RAL+V G L+ AA P W L + + L V R R LGH Sbjct 361 ARVRRLNRALIV----GAVLLTAAGAAVAAGAPRWLLVLGVLAFSASVALGVLRYRHLGH 416 Query 401 RVADGWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLD 460 + D +V + R R + GI+GWT R + FQRRA V T+ AT AG +GY+++D Sbjct 417 ALTDRSVVIAPPRVARHRHTLDRDGIVGWTTRTSWFQRRAAVCTVTVATAAGSEGYEMVD 476 Query 461 VPAELAWS-VAGAASPWVADSV 481 V + A + A PW++ V Sbjct 477 VRDDAAADFIVATAPPWMSQFV 498 >gi|291302522|ref|YP_003513800.1| hypothetical protein Snas_5071 [Stackebrandtia nassauensis DSM 44728] gi|290571742|gb|ADD44707.1| membrane-flanked domain protein [Stackebrandtia nassauensis DSM 44728] Length=554 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 174/502 (35%), Positives = 241/502 (49%), Gaps = 44/502 (8%) Query 8 WHRLSPRMLLVHPVHEMLRQLP-----VLIGSVVLGSATGNPVWPLAALGVTVVFGVLRW 62 W RL R+L V V +L +P + G + G G+ + AA + V LRW Sbjct 44 WRRLDSRVLWVDTVRAILSLIPGGLAVFVFGQEINGFFIGSALVATAAGVLGAVADFLRW 103 Query 63 FFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQE-AR 121 F T YR+ +++ LRTG+L R+ +V +RIRS+ +A+L HRL GL +LR+ GQ+ + Sbjct 104 FKTRYRVTSDHIELRTGLLFRKHRTVKLDRIRSIDAKAKLRHRLAGLRILRIEAGQQGSA 163 Query 122 GEAAFELDAVDSARVPRLRALLLAESLAP------VEPTGR----------VLARWQSSW 165 GE+AF LDAV RLR LL + AP EP LA ++ W Sbjct 164 GESAFALDAVSKETARRLRVELLHRAPAPAATETETEPDAESAPESMSDETTLATFRWQW 223 Query 166 LRYAPLS-FSGLVMIGAVIGLGYQTGLAVRLPESGFARSAVDAAQ-----RAGVVLVVAV 219 + + + ++ LV G V G GL F VD A + L + Sbjct 224 IVHNIFTIWAYLVAAGLVWGGNALAGL--------FGGEPVDWALSLLGWQGFTHLPSLL 275 Query 220 TVLLVVGVSALLAVLFSWLTYG-NLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGA 278 +V + +GV + + F+++T L R L GL RE D RLRG Sbjct 276 SVTIALGVLGVAGLAFAFMTENWGFRLTRVTDPANSTLRTEKGLFSTREVNRDENRLRGV 335 Query 279 TLREPLLVRLLRGARLDAVMTGVHGEGQSSMLLPPCPFETATAVLTDLIDNTDA-AAGPL 337 + +PLL R L A A+ TG+ G++S LLP P TA AV ++ + +A + L Sbjct 336 QISQPLLWRWLGTADTAAISTGLSQWGEASQLLPRTPIATARAVAARVLPDAEALFSRRL 395 Query 338 RRHGPAAARRRWTRALLVPTLAGVALIAAAPILGVPGWAWTLWA----VLTAGCAGLAVD 393 RH AA RRR RA + T A V IAA VPG+ T+W +L GLAV Sbjct 396 VRHPWAALRRRLVRATV--TTAVVTGIAAYLGATVPGFPDTVWIYCGLILWPLALGLAVA 453 Query 394 RVRSLGHRVADGWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGR 453 SLGH V+ ++V R+GSL + IIGWT +Q+LFQR AG+ ++ A T AG Sbjct 454 SYLSLGHAVSGDYVVTRSGSLSAATAVLRRQAIIGWTFKQSLFQRLAGLMSVEATTAAGD 513 Query 454 KGYQVLDVPAELAWSVAGAASP 475 K Y V D A A AA P Sbjct 514 KEYSVPDAAEADALRFADAALP 535 >gi|134097811|ref|YP_001103472.1| membrane-flanked domain-containing protein [Saccharopolyspora erythraea NRRL 2338] gi|291005553|ref|ZP_06563526.1| membrane-flanked domain-containing protein [Saccharopolyspora erythraea NRRL 2338] gi|133910434|emb|CAM00547.1| membrane-flanked domain protein [Saccharopolyspora erythraea NRRL 2338] Length=532 Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 161/494 (33%), Positives = 233/494 (48%), Gaps = 27/494 (5%) Query 2 TDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVFGVL- 60 D WHRL R + V + + +P L +V ++ G L G+ V VL Sbjct 32 NDLTATWHRLDARTVFVTVILVLAPLIPTLAVMLVSRASAGAL---LTTSGIWVAIAVLL 88 Query 61 ------RWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRV 114 W+ T+YR+ DE LR G+LSR +PR+RIR+V + +HR+ L V+++ Sbjct 89 CGGAAYDWYVTSYRVTDERFELRKGVLSRSHRWIPRDRIRAVDLTSDPVHRVFRLAVVKI 148 Query 115 GTGQEARGEAAFELDAVDSARVPRLRALLL--AESLAPVEPTGRV----LARWQSSWLRY 168 GTGQ + A +LDA+ R LR LL + + PT +V LA +WL Y Sbjct 149 GTGQSSGENAELKLDAIPVHRAEALRRELLHAPQRQSAAGPTAQVTEGVLASLNPAWLGY 208 Query 169 APLSFSGLVMIGAVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVS 228 L+ S ++ IG + + V L E G ++ +D + + + ++ L+ + Sbjct 209 GALTVSLAAIVWGAIGSAFGSFREV-LVEFGVFQAILDQLGQFPLWMTISGGALVALATG 267 Query 229 ALLAVLFSWLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRL 288 A+L S + L R + L +R GLL R + + RLRG + EPL++R Sbjct 268 MAGALLLSVEMWWGFRLTRE---HDTTLRVRRGLLTTRSVSLEEGRLRGVEISEPLVLRW 324 Query 289 LRGARLDAVMTGVHGEG-----QSSMLLPPCPFETATAVLTDLIDNTDA-AAGPLRRHGP 342 GAR +AV TG+ E ++ LLPP P A V ++ + A G LR H Sbjct 325 AGGARTNAVATGLGTEKDGKRTENKTLLPPAPLAEAQRVSAVVLREAEPPATGDLRAHPR 384 Query 343 AAARRRWTRALLVPTLAGVALIAAAPILGVPGWAWTLWAVLTAGCAGL-AVDRVRSLGHR 401 A RRR T AL A A + +P W A + A A D RSLGHR Sbjct 385 VARRRRVTWALFAVLPFVAAPAVFAALGWIPMWTVLAVAAVGAAVAFAAGSDAYRSLGHR 444 Query 402 VADGWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDV 461 + D +LV R G+ RR + GIIGW VRQ+LFQRR+ + T+ A T AG Y++ DV Sbjct 445 LGDRYLVMRRGTGVRRTVALQRGGIIGWRVRQSLFQRRSDLVTVAAITAAGSGAYKMPDV 504 Query 462 PAELAWSVAGAASP 475 VA A P Sbjct 505 HTSDGLGVAAEAVP 518 >gi|62737765|gb|AAX98182.1| putative membrane protein [Streptomyces aizunensis] Length=514 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 169/511 (34%), Positives = 242/511 (48%), Gaps = 73/511 (14%) Query 7 DWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSAT----GNPVWPLAALG-VTVVF---- 57 +W RLSPR+LLV+ L +L G + L + T G + L +LG + +VF Sbjct 22 EWSRLSPRLLLVN--------LSMLAGPLALFAVTVALTGANLQALISLGSLLIVFLVIT 73 Query 58 --GVLRWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVG 115 +R T +R+ E V LR+G+L R SVP +R+RSV EA+ +HRL GL LR+G Sbjct 74 GISTMRLLTTRFRVTAERVELRSGLLFRSRRSVPIDRVRSVDVEAKPVHRLFGLASLRIG 133 Query 116 TGQEARGEAAFELDAVD---SARVPRLRALLLAESLAPVEPTGRVLARWQSSWLRYAPLS 172 TG++ LD + + R+ RL A + +A +WLRYAPL+ Sbjct 134 TGEQGASSRRLSLDGITRRQARRLRRLLIDRRGSGHATGQDQDVTIAEMDWAWLRYAPLT 193 Query 173 FSGLVMIGAVIGLGYQT--GLAVRLPESGFARSAVDAAQRAGVV-----LVVAVTVLLVV 225 G+ + A +G Y+ + V E G + D R G V ++VAV + VV Sbjct 194 IWGVGSVFAAVGTAYRILHEMKVDPLELGVVK---DIEDRFGSVPLWFGILVAVVITAVV 250 Query 226 GVSALLAVLFSWLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLL 285 G + A + N L R G G+ +R GLL R T + RRLRG L EP+L Sbjct 251 GAAVSTATFVD--AWTNYRLEREGV---GIFRIRRGLLISRSVTIEERRLRGVELAEPML 305 Query 286 VRLLRGARLDAVMTGVHGEGQS---SMLLPPCPFETATAVLTDLI--DNTDAAAGPLRRH 340 +R GA L A+ +G+ ++ L PP P + A V D++ + + L RH Sbjct 306 LRWAGGATLSAIASGLSNSQENRSRCSLTPPVPRDEALRVAADVLAEEGSPTELTKLVRH 365 Query 341 GPAAARRRWTRAL----------------LVPTLAGVALIAAAPILGVPGWAWTLWAVLT 384 AA RRR R L L P L A I A ++G+P V+ Sbjct 366 SRAALRRRINRGLLVLAAVVAVPLGLGLWLTPVLVHTAWITA--LVGLP-------VVIV 416 Query 385 AGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVAT 444 LA D RSLGH + D +LV RAG+ RR + G+IGW + ++ FQRR+G+ T Sbjct 417 -----LANDAYRSLGHGIRDRYLVVRAGTFARRTVAVQRDGVIGWNISRSYFQRRSGLLT 471 Query 445 LVAATVAGRKGYQVLDVPAELAWSVAGAASP 475 + AT AG ++V DV + A A P Sbjct 472 -IGATTAGVGCHKVRDVSVGAGLAFAEEAVP 501 >gi|331698792|ref|YP_004335031.1| membrane protein [Pseudonocardia dioxanivorans CB1190] gi|326953481|gb|AEA27178.1| membrane-flanked domain DUF304 [Pseudonocardia dioxanivorans CB1190] Length=551 Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 177/511 (35%), Positives = 240/511 (47%), Gaps = 77/511 (15%) Query 8 WHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTV---VFGVLRWFF 64 W RL RML+V P+ ++R LP+L+ + G G+PV LG+TV V G++RW Sbjct 10 WRRLDGRMLVVAPMQHVVRLLPLLVILLFTGR--GDPVRLWITLGITVALVVLGLVRWKT 67 Query 65 TTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRV-GTGQEARGE 123 T YRI + V L +G + R+ SVPR+R+R+V + LLHR+ GL VL V G + Sbjct 68 TRYRITPDRVELHSGWVRRQRRSVPRDRLRTVDVTSTLLHRVFGLGVLHVRGASHASADH 127 Query 124 AAFELDAVDSARVPRLRALLLAESLAPVEPTG---------------------------- 155 +LDAV A RLR LL S AP G Sbjct 128 HGLKLDAVSVAEAGRLRRELLQSSPAPGGVGGRTPGPDQAADAPDAPGAPGEVLSGDGRR 187 Query 156 ------RVLARWQSSWLRYAPLSFSGLVMIGAVIGLGYQ--TGLAVRLPESGFARSAVDA 207 RVL+ + W+R+APL+ S L G +I + + L VR + F A D Sbjct 188 GDHRHSRVLSVLRWPWIRFAPLTTSALAGTGVLIAAVWNVVSELGVRPRDLPF---AADF 244 Query 208 AQRAGVVLVVAVTVLLVVGV---------SALLAVLFSWLTYGNLLLRRGGSGQEGVLHL 258 QR V+ + L VG ++F+ +G L R EG L + Sbjct 245 EQR-----VLGAAIWLTVGFLALALLVVAVLGALLMFTERWWGYRLTR----DDEGTLRV 295 Query 259 RHGLLRVREHTYDMRRLRGATLREPLLVRLLRGARLDAVMTGVHGEGQSSMLLPPCPFET 318 GLL R + RLRG + EPLL+R RGA+ + TG+ Q L PP + Sbjct 296 HRGLLTRRSLSVAGNRLRGVLVSEPLLLRAGRGAQTRVLATGLGRGSQGGALQPPAS-RS 354 Query 319 ATAVLTDLIDNTD---AAAGPLRRHGPAAARRRWTRAL---LVPTLAGVALIAAAPILGV 372 T L L+ + PLRRH A RR TRA+ LV AG + + V Sbjct 355 ETHALAALVAGEPVERSTLAPLRRHPRRALWRRLTRAVGPALVVCAAGWTVAST-----V 409 Query 373 PGWAW--TLWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDCIACTGIIGWT 430 GW+W L L A LA+DR R+LGH + D LV R G L R + +G+IGW Sbjct 410 AGWSWLGPLTTALAALAVPLALDRYRNLGHLLTDRHLVTRWGGLHRHTVVLERSGVIGWR 469 Query 431 VRQTLFQRRAGVATLVAATVAGRKGYQVLDV 461 +RQ++FQRR G+ T+ A T AG GY+V DV Sbjct 470 LRQSVFQRRVGLVTVEAVTAAGDGGYRVTDV 500 >gi|345015253|ref|YP_004817607.1| hypothetical protein Strvi_8004 [Streptomyces violaceusniger Tu 4113] gi|344041602|gb|AEM87327.1| membrane-flanked domain DUF304 [Streptomyces violaceusniger Tu 4113] Length=515 Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 168/510 (33%), Positives = 237/510 (47%), Gaps = 64/510 (12%) Query 6 HDWHRLSPRMLLVH------PVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVV--- 56 HDW RL+ R+LLV+ PV L L V G L + L +L VT + Sbjct 16 HDWGRLNSRLLLVNLSILAAPVAMFLVSLAVTGGDTNL-----QVIITLGSLFVTFLVIS 70 Query 57 -FGVLRWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVG 115 G++R F T YR+ D+ L TG+L R SVP RIR V A +HR+ GLT LR+ Sbjct 71 GIGLMRLFTTRYRLTDDRFELHTGLLFRSERSVPIGRIRGVDLTANPVHRIFGLTTLRID 130 Query 116 TGQEARGEA-AFELDAVDSARVPRLRALLLAESLA----PVEPTGRVLARWQSSWLRYAP 170 +G ++ A LD + A LR ++A A PV + VL+R SWLRY P Sbjct 131 SGDQSDAAARRLALDGITKAEALELRGRIIALRDAGQARPVADSDGVLSRLDWSWLRYGP 190 Query 171 LSFSGLVMIGAVIGLGYQT--GLAVRLPESGFARSAVDAAQRAGVV-----LVVAVTVLL 223 L+ G+ + + Y+T L V + G + D R G + L++A +++ Sbjct 191 LTLWGVGGVFIAVASAYRTLSELQVNPLDLGIIK---DLEDRFGTIPLWYGLLLAAVLIV 247 Query 224 VVGVSALLAVLF-SWLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLRE 282 V+G+ A +W Y LRR G+ +R GLL R + + R LRG L E Sbjct 248 VLGMIGSTATFIENWAGYE---LRR---EDGGIFRIRRGLLATRSVSIEERHLRGLELVE 301 Query 283 PLLVRLLRGARLDAVMTGVHGEGQS---SMLLPPCPFETATAVLTDLIDNTDAAAGPLRR 339 P+ +R +GA+L+AV +G+ + + L PP P A V + + +G + R Sbjct 302 PIPLRWAKGAKLNAVASGLGNQEDNRRRRALTPPTPRGEALRVAAEALPT---GSGLIER 358 Query 340 -----HGPAAARRRWTRALLVPTLAGVALIAAAPILGVPGWAWTLWAVLTAGCAG----- 389 H AA RRR RAL+ LIAA P+ G+ W + W V+T G Sbjct 359 KGLLPHPRAALRRRINRALIWSV-----LIAAVPV-GLGLWLGS-WLVITGVITGVVLVP 411 Query 390 ----LAVDRVRSLGHRVADGWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATL 445 AV SLGH + +LV +G+ RR IIGW +T FQRR G+ TL Sbjct 412 VLVAFAVGAYHSLGHLLRGRFLVMCSGAFARRTVAHQREAIIGWKFSRTPFQRRVGLITL 471 Query 446 VAATVAGRKGYQVLDVPAELAWSVAGAASP 475 A T AG Y V D+ ++A A P Sbjct 472 GATTAAGEGVYHVHDLTEGQGIALAETAVP 501 >gi|320011437|gb|ADW06287.1| membrane-flanked domain protein [Streptomyces flavogriseus ATCC 33331] Length=505 Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 160/446 (36%), Positives = 220/446 (50%), Gaps = 31/446 (6%) Query 49 AALGVTVVFGV--LRWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRL 106 AAL + GV +RW T YR+ +E V L TG+L + S+ R RIR+V A L R+ Sbjct 57 AALVIGAAAGVDRVRWHRTRYRVGEERVDLHTGLLVVKRRSLARERIRTVDLTAHPLLRV 116 Query 107 LGLTVLRVGTGQEARGEAAFELDAVDSAR--VPRLRALLLAESLAPVEPTGRVLARWQSS 164 LGL +R+GTG++ G++ ELD V A R L A ++ P LA Sbjct 117 LGLVTVRIGTGEQG-GDSTLELDPVTRAEGERLRRLLLERASTVPPGVHREGELAALDPR 175 Query 165 WLRYAPLSFSGLVMIGAVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLV 224 W+RYAP+SF ++ GA G Q V G + V R +L VT++L Sbjct 176 WIRYAPVSFVAPMLGGAAAGAVLQVSDWV--GAQGEVIAWVADRFRDTPLLWTIVTLVLA 233 Query 225 VGVSALLAVLFSWLT-YGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREP 283 ++ ++ W + N L R G L +R GL R + + RLRG L EP Sbjct 234 ALIAGVVGAFGLWTEMWWNYRLEREPGG---TLRVRRGLFTSRSISVEEARLRGVDLVEP 290 Query 284 LLVRLLRGARLDAVMTGVHGEGQS-----SMLLPPCPFETATAVLTDLIDNT-DAAAGPL 337 L VRLL ARLDA+ TG+ + ++ + LLP P E A +V D++ T A L Sbjct 291 LGVRLLGAARLDAITTGLAKDHEARDADHNTLLPVAPRERADSVAADVLRETATPTAAAL 350 Query 338 RRHGPAAARRRWTRALLVPTLAGVALIAAAPILGVPGWAWTLWAVLTAGCA--------G 389 RH PAA RR R+L A V + +LG LW L GCA Sbjct 351 VRHPPAARGRRLRRSLA----ASVGPVLVLAVLGTLFTPVLLWIAL--GCAVVSVPLAVA 404 Query 390 LAVDRVRSLGHRVADGWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAAT 449 LA+D R LGH ++ +LV R+G+++R + G+IGWTVRQ++FQRRAG+ T+ A T Sbjct 405 LALDAYRGLGHALSGRYLVTRSGTVRRSTAALERAGVIGWTVRQSVFQRRAGLLTVTATT 464 Query 450 VAGRKGYQVLDVPAELAWSVAGAASP 475 AG Y V D A + A A P Sbjct 465 AAGGGAYTVYDADAAEGLTFAAEAVP 490 >gi|326331002|ref|ZP_08197301.1| bacterial membrane flanked domain protein [Nocardioidaceae bacterium Broad-1] gi|325951213|gb|EGD43254.1| bacterial membrane flanked domain protein [Nocardioidaceae bacterium Broad-1] Length=528 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 154/504 (31%), Positives = 245/504 (49%), Gaps = 56/504 (11%) Query 7 DWHRLSPRMLLVHPVHEMLRQ--LPVLIGSVVLGSATGNPVWPLAALGVTVVF---GVLR 61 +W RL+ +V P+ LRQ +P +G+ G A + L ALG+ VV G++ Sbjct 16 EWQRLAGWTAIVSPL-ATLRQAIIPAAVGAFGAGQANVF-IGLLVALGIAVVAALAGLVP 73 Query 62 WFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQEAR 121 W TTYR+ ++ +R G+L+R ++ +R+RSV + L+HR LG+T + VGTG + Sbjct 74 WLTTTYRVTPTHLEVRKGLLNRTTLTARLDRVRSVDLSSTLIHRALGVTKVNVGTGVD-- 131 Query 122 GEAAFELDAVDSARVPRLRALLL-----------------------AESLAPV--EPTGR 156 E LD++ RLR LL A S P+ +P G Sbjct 132 -EGQITLDSLTKDAAARLRRELLHAAPTSPTDVAPEASGGDASAAVATSPGPLRSDPGGE 190 Query 157 VLARWQSSWLRYAPLSFSGLVM----IGAVIG-----LGYQTGLAVRLPESGFARSAVDA 207 V+A+ SW+RYAPL+ L + + A G + ++ + +R+ + ++D+ Sbjct 191 VIAKLDWSWIRYAPLNLKNLAIALGGLAAFFGAFSDVIPWERTIGIRVDDGQINGRSIDS 250 Query 208 AQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTYGNLLLRRGGSGQEGV-LHLRHGLLRVR 266 + +++ + + ++ V V A+ + + + + +L + R G+EG L GL R Sbjct 251 FLQL-LIIAIPIALVAAVVVWAVGSCVGYAVRWWDLQVVRE-QGREGTTLRRSFGLTSTR 308 Query 267 EHTYDMRRLRGATLREPLLVRLLRGARLDAVMTGVHGEGQSSMLLPPCPFETATAVLTDL 326 T + ++RGAT L+ L GA L+ + TG+ + S +LP P +AV TD+ Sbjct 309 ATTVEEAKVRGATSTVGPLIGLAGGADLNLLTTGL--DDNSPAVLPTAPESVVSAVGTDI 366 Query 327 IDNTDAAAGPLRRHGPAAARRRWTRALLVPTLAGVALIAAAPILGVPGWAWTLWAVLTAG 386 + DA + L HGP RR W RA + + + + ++GV G W W +T Sbjct 367 LGE-DAFSAELTGHGPRPRRRYWFRAAVATLVWTLVALVPTVLIGVLGDTWIWWLPVTVM 425 Query 387 CAGLAVD------RVRSLGHRVADGWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRA 440 L + R R LGH + D +LV R+GS R + GIIGW VRQT F RR Sbjct 426 VVALVLGMLGAELRHRHLGHALTDRYLVVRSGSYTAVRTALQTDGIIGWRVRQTFFDRRI 485 Query 441 GVATLVAATVAGRKGYQVLDVPAE 464 G+A + A T AG++ V DVP E Sbjct 486 GLAQVTAMTAAGQEHVAVPDVPLE 509 >gi|257055485|ref|YP_003133317.1| hypothetical protein Svir_14500 [Saccharomonospora viridis DSM 43017] gi|256585357|gb|ACU96490.1| predicted membrane protein [Saccharomonospora viridis DSM 43017] Length=504 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 177/500 (36%), Positives = 241/500 (49%), Gaps = 46/500 (9%) Query 7 DWHRLSPRMLLVHPVHEMLRQLPV-LIGSVVLGSATGNPVWPLAALGVTVVFGV------ 59 +W RL R + V LR + V ++ V +G G + P A+ + V GV Sbjct 9 EWKRLDRRTVTV----TALRMMGVAVVAGVPIGIGVGRALAPGPAVAIVVSAGVVLTLVA 64 Query 60 -----LRWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRV 114 LRW T YR+ E LR GI+ R+ S+ R+RIR+V A +L RL GL +++ Sbjct 65 AGVDHLRWRRTRYRVLPERFELRQGIVVRKRRSLNRDRIRTVDITASVLLRLFGLAHVKI 124 Query 115 GTGQEAR-GEAAFELDAVDSARVPRLRALLLAES-LAPVEP-TGRVLARWQSSWLRYAPL 171 GTG++A E++ L+ + A LR LL + L EP VL+ W+RYAP+ Sbjct 125 GTGEQAEDNESSLSLNPISRADAEWLRRELLDRAALREPEPGQDGVLSTLHLPWVRYAPV 184 Query 172 SFSGLVMIGAVIGLGYQTGLAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALL 231 SF + A G+ Q L +S +D ++ VV V V + + V A+ Sbjct 185 SFVTPALGAAAFGVVLQVAEWFGL-QSDVVSWVLDLLSELSLIAVVLVLVAIGILVGAIG 243 Query 232 AV-LFSWLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVRLLR 290 AV LF + + L R G G L +R GLL R + + RRLRG L EPL RLL Sbjct 244 AVALFVEMWWQYRLEREPG----GTLRVRRGLLTTRSISVEERRLRGVELVEPLGNRLLG 299 Query 291 GARLDAVMTGVHGEGQS-----SMLLPPCPFE----TATAVLTDLIDNTDAAAGPLRRHG 341 ARLDAV TG+ Q + L P P E A AVL + + T A LR H Sbjct 300 AARLDAVATGLAQREQDKKAAHNTLQPAAPREHADRVAAAVLREPVSPT--AVARLRPH- 356 Query 342 PAAARRRWTR------ALLVPTLAGVALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDRV 395 P AAR R R A ++ L V L +L V AW VL LA+D Sbjct 357 PRAARGRRVRWALAAVAAVLTPLVVVGLTVTPVLLHV---AWVGAVVLVPVAVALALDAY 413 Query 396 RSLGHRVADGWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGRKG 455 R+LGH + DG+LV R G+++R + +G+IGW VRQ+ FQRR G+ TL A T AG + Sbjct 414 RNLGHGLTDGYLVFRHGTVRRGTVALQRSGVIGWAVRQSFFQRRRGLLTLTATTAAGSQA 473 Query 456 YQVLDVPAELAWSVAGAASP 475 Y DV + A A P Sbjct 474 YSAHDVDESEGLAFAEEAVP 493 >gi|229821789|ref|YP_002883315.1| membrane-flanked domain-containing protein [Beutenbergia cavernae DSM 12333] gi|229567702|gb|ACQ81553.1| membrane-flanked domain protein [Beutenbergia cavernae DSM 12333] Length=519 Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 157/461 (35%), Positives = 221/461 (48%), Gaps = 41/461 (8%) Query 51 LGVTVVFGVLRWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLT 110 + V V LR FT YR+ + V + +GIL RR S+ R+RIRSV A L R+ GL Sbjct 69 VAVGTVLDGLRVRFTRYRVAETRVEMSSGILFRRRRSLARDRIRSVDVNANPLQRVFGLV 128 Query 111 VLRVGTGQEARG-----EAAFELDAVDSARVPRLRALLLAESLAP--VEPTGRVLARWQS 163 ++VGT + G E + LD+V A RLRA LL + P + LA W+ Sbjct 129 TVKVGTAETGSGSGSATERSLVLDSVARAEGDRLRAELLRRGVEGDGAAPDEQRLATWEP 188 Query 164 SWLRYAPLSFSGLVMIGAVIGLGYQTGLAVRLPESGFARSAVDAAQRAG--------VVL 215 WLRYAPLSF ++ A++G +Q F R + AG VL Sbjct 189 VWLRYAPLSFLTPLIPTALVGFTFQVA-------DWFGRGGLPVEIVAGWVETYGPWPVL 241 Query 216 VVAVTVLLVVGVSALLAV-LFSWLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRR 274 ++ +V+G LA+ +W + + L R G G L +R GLL R + + R Sbjct 242 LLGFGAFVVLGAIGSLAIHAEAW--WNHRLDREPG----GTLRVRRGLLVSRSLSLEEER 295 Query 275 LRGATLREPLLVRLLRGARLDAVMTGVH-GEGQSSM--LLPPCPFETATAVLTDLIDNTD 331 +RG + EP+ +R R ARLD V G+ EG+S + L+PP P A ++ D Sbjct 296 IRGVEIVEPIGIRSARAARLDVVAIGLKTDEGRSDLTTLVPPAPRAVTLAAAEAVVGPVD 355 Query 332 AAAGPLRRHGPAAARRRWTRALLVPTLAGVALIAAAPILGVPGWAWTLWAV-----LTAG 386 L H P AAR R R V L + +L P W++ + L G Sbjct 356 VE---LSGH-PRAARTRRLRWAAVVVLGLALVAVVVHVLWSPSAFWSVVTIGAALLLAVG 411 Query 387 CAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLV 446 +AVD SLGH + + LVAR+GS++R + GIIGW +RQ++FQRR G+ TL Sbjct 412 AVAIAVDAYASLGHALTERHLVARSGSVRRATVHLDRPGIIGWRIRQSVFQRRMGLMTLE 471 Query 447 AATVAGRKGYQVLDVPAELAWSVAGAASPWVADSVWLRHGS 487 A T AGR Y V+D + VA A P + + +R G Sbjct 472 ATTAAGRGHYAVVDAGSGQGLQVAADAVPGLLEPFLVRAGD 512 >gi|269956868|ref|YP_003326657.1| membrane-flanked domain-containing protein [Xylanimonas cellulosilytica DSM 15894] gi|269305549|gb|ACZ31099.1| membrane-flanked domain protein [Xylanimonas cellulosilytica DSM 15894] Length=540 Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 165/520 (32%), Positives = 240/520 (47%), Gaps = 52/520 (10%) Query 7 DWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATG-NPVWPLAALGVTVVFGV----LR 61 W RLS RM+ V V +L +P + V+G+ G +WPL L V V G LR Sbjct 17 SWQRLSTRMIWVDLVQTVLSAVPAAVAIWVVGAEPGAGQIWPLIGLAVFGVLGAITDALR 76 Query 62 WFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTGQE-A 120 W FT YR+ +V L+TG++ R S+ R+RIRSV TEA+L HRL GL V++VG GQ+ A Sbjct 77 WTFTRYRVTATHVELKTGVIFRVHRSIQRDRIRSVDTEAKLRHRLGGLRVVKVGAGQQAA 136 Query 121 RGEAAFELDAVDSARVPRLRALLL--AESLAPVEPTGR---------------------V 157 GE+A LDA+ + LR+ LL A++LA EP+ + V Sbjct 137 EGESAVALDALTAVDAHALRSRLLDPAQALAAAEPSDQPDQPPHEDPAVALDDRTTPLAV 196 Query 158 LARWQSSWLRYAPLSFSGLVMIGAVIGLGYQTGLAVRLPESGFARSAVDAAQRAGV---- 213 LAR Q W+ + ++ + V Y ++ + +GF D V Sbjct 197 LARLQPRWVIHNMMNIWAYALALGVGWGAYWLLGSLGVDVAGFVGGLADWESLGWVATAA 256 Query 214 VLVVAVTVLLVVGVSALLAVLFSWLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMR 273 + ++AVTV V+G++ L + Y N L R + +L R GL RE D Sbjct 257 IALLAVTVFGVIGLA-----LNFFAEYWNFQLARTRGPEGTLLQTRQGLFTTREVNRDEN 311 Query 274 RLRGATLREPLLVRLLRGARLDAVMTGVHGEGQSS--MLLPPCPFETATAVLTDLIDNTD 331 R+RG + EPLL R + A + TG+ S+ +LP P A V T+++ Sbjct 312 RIRGVQVSEPLLWRWMGTADTSVITTGLDMWSMSTPATILPRGPVTVAKRVATEVLGTDA 371 Query 332 AAAGPLRRHGPAAARRR--WTRAL---LVPTLAGVALIAAAPILGVPGW-AWTLWAVLTA 385 A L H PAA RRR W + L +AL P + W A LW V Sbjct 372 PFATALAAHPPAALRRRLWWATTFSLGIALVLTWLALTGVLPYRAI--WAAAALWPV--- 426 Query 386 GCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATL 445 G A+ R+LGH + LV R+G + R + + + +R++L QRR G+ ++ Sbjct 427 -SLGAALVAYRALGHAIVGPHLVTRSGLVSRSTTVVQRSAVSTIVIRESLLQRRLGLQSV 485 Query 446 VAATVAGRKGYQVLDVPAELAWSVAGAASPWVADSVWLRH 485 T AG Y D+ A + + A A+P V D H Sbjct 486 SVTTAAGYGAYDTPDLDAGTSLAFAVRAAPGVLDPFLAAH 525 >gi|297195055|ref|ZP_06912453.1| membrane-flanked domain-containing protein [Streptomyces pristinaespiralis ATCC 25486] gi|197721554|gb|EDY65462.1| membrane-flanked domain-containing protein [Streptomyces pristinaespiralis ATCC 25486] Length=501 Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 170/477 (36%), Positives = 235/477 (50%), Gaps = 60/477 (12%) Query 7 DWHRLSPRMLLVHPV----HEMLRQLPVLIG---SVVLGSATGNPVWPLAALGVTVVFG- 58 +W RL R +LV + LPVL+G + LG A G W LA + V G Sbjct 7 EWRRLDGRTVLVTAMVLAGFAFGAGLPVLLGLAGGMPLGKALG---WVLAGAALLVGAGT 63 Query 59 ---VLRWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVG 115 ++RW T YRI E L TG++ + S+ R RIRSV A +L R+LGL +R+G Sbjct 64 GADLVRWQRTRYRIGSERAELHTGLVLVKRRSLARERIRSVDLTANVLLRVLGLVKVRIG 123 Query 116 TGQEARG-EAAFELDAVDSARVPRLRALLLAESL---APVEPTGRVLARWQSSWLRYAPL 171 TG+ A G E+ ELDAV A RLR LLA + A P G LA +W+RYAP+ Sbjct 124 TGEHAAGGESTLELDAVSRAEGERLRLELLARTTSREAAAHPDG-ALAVLDPAWIRYAPV 182 Query 172 SFSGLVMIGAVIGLGYQTGLAVRLPESGFARSAV-----DAAQRAGVVLVVAVTVLLVVG 226 SF ++ GA G Q + E A++ V D + +V ++ VT+ Sbjct 183 SFVAPLLGGAAAGAVMQ------VSEWFGAQAEVIEWVGDRFRDTPLVWII-VTLAAAAL 235 Query 227 VSALLAVLFSWLT-YGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLL 285 V+ ++ + W+ + N L R G L +R GL R + + RRLRG L EPL Sbjct 236 VAGVVGAVGLWIEMWWNYRLEREPGG---TLRVRRGLFTSRSISIEERRLRGVDLVEPLG 292 Query 286 VRLLRGARLDAVMTGVHGEGQS-----SMLLPPCPFETATAVLTDLIDNTDAAAGPLRRH 340 VRL AR+DAV TG+ + Q ++LLP P A V ++ + A P R Sbjct 293 VRLFGAARVDAVATGLVKDQQDKHADINVLLPAVPRALADEVAAQVLRES---ASPTREA 349 Query 341 ----GPAAARRRWTRALLVPTLAGVALIAAAPILGVPGWAWTLWAVLTAGCAG------- 389 P AAR R R L L AL+A L P W + A CA Sbjct 350 VLTPHPRAARGRRLRWALGAVLLPSALLALLGALLTPVLLW-----IAAACAAVGVPVAV 404 Query 390 -LAVDRVRSLGHRVADGWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATL 445 LA+D R+LGH +A +LV R+G+++R + TG+IGWT R+++FQRRAG+ TL Sbjct 405 LLALDAYRALGHGIAGDYLVTRSGTVRRSTVALQRTGVIGWTARRSVFQRRAGLITL 461 Lambda K H 0.325 0.138 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1038195005428 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40