BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1230c Length=411 Score E Sequences producing significant alignments: (Bits) Value gi|15608370|ref|NP_215746.1| hypothetical protein Rv1230c [Mycob... 789 0.0 gi|15840675|ref|NP_335712.1| hypothetical protein MT1268 [Mycoba... 786 0.0 gi|289446820|ref|ZP_06436564.1| membrane protein [Mycobacterium ... 785 0.0 gi|31792423|ref|NP_854916.1| hypothetical protein Mb1262c [Mycob... 783 0.0 gi|289761376|ref|ZP_06520754.1| membrane protein [Mycobacterium ... 783 0.0 gi|289573890|ref|ZP_06454117.1| membrane protein [Mycobacterium ... 782 0.0 gi|308380015|ref|ZP_07669098.1| hypothetical protein TMKG_01727 ... 732 0.0 gi|294994788|ref|ZP_06800479.1| hypothetical protein Mtub2_09817... 726 0.0 gi|254550236|ref|ZP_05140683.1| hypothetical protein Mtube_07219... 724 0.0 gi|313658095|ref|ZP_07814975.1| hypothetical protein MtubKV_0672... 683 0.0 gi|167967888|ref|ZP_02550165.1| hypothetical protein MtubH3_0757... 598 6e-169 gi|240173008|ref|ZP_04751666.1| membrane protein [Mycobacterium ... 484 2e-134 gi|118619616|ref|YP_907948.1| membrane protein [Mycobacterium ul... 483 3e-134 gi|183984183|ref|YP_001852474.1| membrane protein [Mycobacterium... 482 5e-134 gi|41408650|ref|NP_961486.1| hypothetical protein MAP2552 [Mycob... 476 2e-132 gi|342862109|ref|ZP_08718752.1| hypothetical protein MCOL_24581 ... 465 7e-129 gi|254823043|ref|ZP_05228044.1| hypothetical protein MintA_24155... 459 3e-127 gi|118466691|ref|YP_880613.1| hypothetical protein MAV_1369 [Myc... 445 6e-123 gi|336458561|gb|EGO37528.1| membrane-bound lytic murein transgly... 445 8e-123 gi|254774247|ref|ZP_05215763.1| hypothetical protein MaviaA2_062... 443 3e-122 gi|108800953|ref|YP_641150.1| hypothetical protein Mmcs_3989 [My... 413 3e-113 gi|118473902|ref|YP_889317.1| hypothetical protein MSMEG_5067 [M... 395 1e-107 gi|120405442|ref|YP_955271.1| lytic transglycosylase catalytic s... 392 4e-107 gi|296170131|ref|ZP_06851729.1| secreted protein [Mycobacterium ... 382 4e-104 gi|315443261|ref|YP_004076140.1| membrane-bound lytic murein tra... 361 1e-97 gi|145222794|ref|YP_001133472.1| lytic transglycosylase catalyti... 359 4e-97 gi|289749772|ref|ZP_06509150.1| LOW QUALITY PROTEIN: membrane pr... 357 2e-96 gi|333989840|ref|YP_004522454.1| hypothetical protein JDM601_120... 345 5e-93 gi|169628458|ref|YP_001702107.1| hypothetical protein MAB_1367c ... 313 4e-83 gi|289757328|ref|ZP_06516706.1| predicted protein [Mycobacterium... 296 4e-78 gi|54026692|ref|YP_120934.1| hypothetical protein nfa47190 [Noca... 237 2e-60 gi|54027034|ref|YP_121276.1| hypothetical protein nfa50600 [Noca... 234 2e-59 gi|325676415|ref|ZP_08156093.1| hypothetical protein HMPREF0724_... 224 2e-56 gi|312138880|ref|YP_004006216.1| hypothetical protein REQ_14510 ... 224 2e-56 gi|226365452|ref|YP_002783235.1| hypothetical protein ROP_60430 ... 219 8e-55 gi|111022946|ref|YP_705918.1| hypothetical protein RHA1_ro05983 ... 217 3e-54 gi|226307639|ref|YP_002767599.1| hypothetical protein RER_41520 ... 216 6e-54 gi|229493752|ref|ZP_04387534.1| secreted protein [Rhodococcus er... 215 1e-53 gi|111022945|ref|YP_705917.1| hypothetical protein RHA1_ro05982 ... 214 2e-53 gi|226365451|ref|YP_002783234.1| hypothetical protein ROP_60420 ... 213 7e-53 gi|54026693|ref|YP_120935.1| hypothetical protein nfa47200 [Noca... 207 2e-51 gi|226307640|ref|YP_002767600.1| hypothetical protein RER_41530 ... 200 4e-49 gi|333920999|ref|YP_004494580.1| hypothetical protein AS9A_3338 ... 190 5e-46 gi|262201803|ref|YP_003273011.1| membrane-bound lytic murein tra... 186 8e-45 gi|257057189|ref|YP_003135021.1| hypothetical protein Svir_32220... 184 2e-44 gi|343928015|ref|ZP_08767480.1| hypothetical protein GOALK_100_0... 181 2e-43 gi|262200848|ref|YP_003272056.1| membrane-bound lytic murein tra... 181 2e-43 gi|326383773|ref|ZP_08205458.1| Membrane-bound lytic murein tran... 180 4e-43 gi|326382041|ref|ZP_08203734.1| Membrane-bound lytic murein tran... 179 8e-43 gi|302529269|ref|ZP_07281611.1| conserved hypothetical protein [... 177 3e-42 >gi|15608370|ref|NP_215746.1| hypothetical protein Rv1230c [Mycobacterium tuberculosis H37Rv] gi|148661017|ref|YP_001282540.1| hypothetical protein MRA_1239 [Mycobacterium tuberculosis H37Ra] gi|308399211|ref|ZP_07492902.2| membrane protein [Mycobacterium tuberculosis SUMu012] gi|3261829|emb|CAB10927.1| POSSIBLE MEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148505169|gb|ABQ72978.1| putative membrane protein [Mycobacterium tuberculosis H37Ra] gi|308366563|gb|EFP55414.1| membrane protein [Mycobacterium tuberculosis SUMu012] Length=411 Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/411 (99%), Positives = 411/411 (100%), Gaps = 0/411 (0%) Query 1 VHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGSAAPVFPGRTAPVHAV 60 +HIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGSAAPVFPGRTAPVHAV Sbjct 1 MHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGSAAPVFPGRTAPVHAV 60 Query 61 ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSA 120 ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSA Sbjct 61 ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSA 120 Query 121 YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN 180 YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN Sbjct 121 YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN 180 Query 181 EIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG 240 EIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG Sbjct 181 EIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG 240 Query 241 GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN 300 GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN Sbjct 241 GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN 300 Query 301 PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLIC 360 PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLIC Sbjct 301 PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLIC 360 Query 361 IGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAPAPAG 411 IGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAPAPAG Sbjct 361 IGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAPAPAG 411 >gi|15840675|ref|NP_335712.1| hypothetical protein MT1268 [Mycobacterium tuberculosis CDC1551] gi|148822446|ref|YP_001287200.1| hypothetical protein TBFG_11255 [Mycobacterium tuberculosis F11] gi|253799725|ref|YP_003032726.1| hypothetical protein TBMG_02751 [Mycobacterium tuberculosis KZN 1435] 25 more sequence titles Length=411 Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/411 (99%), Positives = 410/411 (99%), Gaps = 0/411 (0%) Query 1 VHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGSAAPVFPGRTAPVHAV 60 +HIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVG AAPVFPGRTAPVHAV Sbjct 1 MHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGGAAPVFPGRTAPVHAV 60 Query 61 ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSA 120 ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSA Sbjct 61 ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSA 120 Query 121 YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN 180 YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN Sbjct 121 YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN 180 Query 181 EIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG 240 EIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG Sbjct 181 EIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG 240 Query 241 GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN 300 GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN Sbjct 241 GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN 300 Query 301 PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLIC 360 PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLIC Sbjct 301 PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLIC 360 Query 361 IGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAPAPAG 411 IGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAPAPAG Sbjct 361 IGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAPAPAG 411 >gi|289446820|ref|ZP_06436564.1| membrane protein [Mycobacterium tuberculosis CPHL_A] gi|289419778|gb|EFD16979.1| membrane protein [Mycobacterium tuberculosis CPHL_A] Length=411 Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/411 (99%), Positives = 409/411 (99%), Gaps = 0/411 (0%) Query 1 VHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGSAAPVFPGRTAPVHAV 60 +HIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVG AAPVFPGRTAPVHAV Sbjct 1 MHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGGAAPVFPGRTAPVHAV 60 Query 61 ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSA 120 ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSA Sbjct 61 ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSA 120 Query 121 YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN 180 YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN Sbjct 121 YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN 180 Query 181 EIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG 240 EIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG Sbjct 181 EIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG 240 Query 241 GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN 300 GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN Sbjct 241 GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN 300 Query 301 PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLIC 360 PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLIC Sbjct 301 PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLIC 360 Query 361 IGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAPAPAG 411 IGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAP PAG Sbjct 361 IGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAPGPAG 411 >gi|31792423|ref|NP_854916.1| hypothetical protein Mb1262c [Mycobacterium bovis AF2122/97] gi|121637159|ref|YP_977382.1| hypothetical protein BCG_1290c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989634|ref|YP_002644321.1| hypothetical protein JTY_1265 [Mycobacterium bovis BCG str. Tokyo 172] gi|31618012|emb|CAD94123.1| POSSIBLE MEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] gi|121492806|emb|CAL71277.1| Possible membrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772747|dbj|BAH25553.1| hypothetical protein JTY_1265 [Mycobacterium bovis BCG str. Tokyo 172] gi|341601177|emb|CCC63850.1| possible membrane protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=411 Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/411 (99%), Positives = 409/411 (99%), Gaps = 0/411 (0%) Query 1 VHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGSAAPVFPGRTAPVHAV 60 +HIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVG AAPVFPGRTAPVHAV Sbjct 1 MHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGGAAPVFPGRTAPVHAV 60 Query 61 ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSA 120 ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATI APPPPMIVNSPGALGIPAMALSA Sbjct 61 ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATIPAPPPPMIVNSPGALGIPAMALSA 120 Query 121 YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN 180 YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN Sbjct 121 YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN 180 Query 181 EIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG 240 EIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG Sbjct 181 EIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG 240 Query 241 GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN 300 GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN Sbjct 241 GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN 300 Query 301 PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLIC 360 PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLIC Sbjct 301 PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLIC 360 Query 361 IGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAPAPAG 411 IGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAPAPAG Sbjct 361 IGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAPAPAG 411 >gi|289761376|ref|ZP_06520754.1| membrane protein [Mycobacterium tuberculosis GM 1503] gi|289708882|gb|EFD72898.1| membrane protein [Mycobacterium tuberculosis GM 1503] Length=411 Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/411 (99%), Positives = 409/411 (99%), Gaps = 0/411 (0%) Query 1 VHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGSAAPVFPGRTAPVHAV 60 +HIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVG AAPVFPGRTAPVHAV Sbjct 1 MHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGGAAPVFPGRTAPVHAV 60 Query 61 ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSA 120 ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSA Sbjct 61 ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSA 120 Query 121 YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN 180 YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN Sbjct 121 YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN 180 Query 181 EIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG 240 EIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG Sbjct 181 EIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG 240 Query 241 GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN 300 GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN Sbjct 241 GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN 300 Query 301 PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLIC 360 PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMF WMAPDPSAPMPGCTLIC Sbjct 301 PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFRWMAPDPSAPMPGCTLIC 360 Query 361 IGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAPAPAG 411 IGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAPAPAG Sbjct 361 IGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAPAPAG 411 >gi|289573890|ref|ZP_06454117.1| membrane protein [Mycobacterium tuberculosis K85] gi|339631297|ref|YP_004722939.1| hypothetical protein MAF_12490 [Mycobacterium africanum GM041182] gi|289538321|gb|EFD42899.1| membrane protein [Mycobacterium tuberculosis K85] gi|339330653|emb|CCC26321.1| putative membrane protein [Mycobacterium africanum GM041182] Length=411 Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/411 (99%), Positives = 409/411 (99%), Gaps = 0/411 (0%) Query 1 VHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGSAAPVFPGRTAPVHAV 60 +HIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVG AAPVFPGRTAPVHAV Sbjct 1 MHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGGAAPVFPGRTAPVHAV 60 Query 61 ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSA 120 ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSA Sbjct 61 ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSA 120 Query 121 YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN 180 YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN Sbjct 121 YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN 180 Query 181 EIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG 240 EIIIQSSVGNRVTYARAMGPMQFLPGT ARYATDGDDDGVADPQNLFDSTLAAARYLCSG Sbjct 181 EIIIQSSVGNRVTYARAMGPMQFLPGTRARYATDGDDDGVADPQNLFDSTLAAARYLCSG 240 Query 241 GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN 300 GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN Sbjct 241 GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN 300 Query 301 PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLIC 360 PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLIC Sbjct 301 PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLIC 360 Query 361 IGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAPAPAG 411 IGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAPAPAG Sbjct 361 IGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAPAPAG 411 >gi|308380015|ref|ZP_07669098.1| hypothetical protein TMKG_01727 [Mycobacterium tuberculosis SUMu011] gi|308362907|gb|EFP51758.1| hypothetical protein TMKG_01727 [Mycobacterium tuberculosis SUMu011] Length=424 Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/378 (99%), Positives = 377/378 (99%), Gaps = 0/378 (0%) Query 1 VHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGSAAPVFPGRTAPVHAV 60 +HIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVG AAPVFPGRTAPVHAV Sbjct 1 MHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGGAAPVFPGRTAPVHAV 60 Query 61 ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSA 120 ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSA Sbjct 61 ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSA 120 Query 121 YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN 180 YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN Sbjct 121 YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN 180 Query 181 EIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG 240 EIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG Sbjct 181 EIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG 240 Query 241 GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN 300 GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN Sbjct 241 GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN 300 Query 301 PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLIC 360 PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLIC Sbjct 301 PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGCTLIC 360 Query 361 IGSHGPPVGAPPFPPTAP 378 IGSHGPPVGAPPFPPTAP Sbjct 361 IGSHGPPVGAPPFPPTAP 378 >gi|294994788|ref|ZP_06800479.1| hypothetical protein Mtub2_09817 [Mycobacterium tuberculosis 210] gi|297633778|ref|ZP_06951558.1| hypothetical protein MtubK4_06634 [Mycobacterium tuberculosis KZN 4207] gi|297730764|ref|ZP_06959882.1| hypothetical protein MtubKR_06719 [Mycobacterium tuberculosis KZN R506] gi|339294217|gb|AEJ46328.1| hypothetical protein CCDC5079_1138 [Mycobacterium tuberculosis CCDC5079] gi|339297857|gb|AEJ49967.1| hypothetical protein CCDC5180_1130 [Mycobacterium tuberculosis CCDC5180] Length=381 Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/381 (99%), Positives = 380/381 (99%), Gaps = 0/381 (0%) Query 31 VAAIAPLVFASAVGSAAPVFPGRTAPVHAVITPVAAVAASGIDLSGPVVIAMKRPPTSFR 90 +AAIAPLVFASAVG AAPVFPGRTAPVHAVITPVAAVAASGIDLSGPVVIAMKRPPTSFR Sbjct 1 MAAIAPLVFASAVGGAAPVFPGRTAPVHAVITPVAAVAASGIDLSGPVVIAMKRPPTSFR 60 Query 91 VAVATISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIES 150 VAVATISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIES Sbjct 61 VAVATISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIES 120 Query 151 MHANGGATDARGTAIQPIYGPTLDGTLPGNEIIIQSSVGNRVTYARAMGPMQFLPGTWAR 210 MHANGGATDARGTAIQPIYGPTLDGTLPGNEIIIQSSVGNRVTYARAMGPMQFLPGTWAR Sbjct 121 MHANGGATDARGTAIQPIYGPTLDGTLPGNEIIIQSSVGNRVTYARAMGPMQFLPGTWAR 180 Query 211 YATDGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGW 270 YATDGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGW Sbjct 181 YATDGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGW 240 Query 271 AAGYATGVFPVDLPPITGPPPPLGDAHLENPEGLGPGLPINVNGLTADGPMAHLPLIDLT 330 AAGYATGVFPVDLPPITGPPPPLGDAHLENPEGLGPGLPINVNGLTADGPMAHLPLIDLT Sbjct 241 AAGYATGVFPVDLPPITGPPPPLGDAHLENPEGLGPGLPINVNGLTADGPMAHLPLIDLT 300 Query 331 PRQAALNPPPMFPWMAPDPSAPMPGCTLICIGSHGPPVGAPPFPPTAPPPPFLPAAPPPP 390 PRQAALNPPPMFPWMAPDPSAPMPGCTLICIGSHGPPVGAPPFPPTAPPPPFLPAAPPPP Sbjct 301 PRQAALNPPPMFPWMAPDPSAPMPGCTLICIGSHGPPVGAPPFPPTAPPPPFLPAAPPPP 360 Query 391 DPLAGPPGDAGLAPPAPAPAG 411 DPLAGPPGDAGLAPPAPAPAG Sbjct 361 DPLAGPPGDAGLAPPAPAPAG 381 >gi|254550236|ref|ZP_05140683.1| hypothetical protein Mtube_07219 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=381 Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/381 (99%), Positives = 379/381 (99%), Gaps = 0/381 (0%) Query 31 VAAIAPLVFASAVGSAAPVFPGRTAPVHAVITPVAAVAASGIDLSGPVVIAMKRPPTSFR 90 +AAIAPLVFASAVG AAPVFPGRTAPVHAVITPVAAVAASGIDLSGPVVIAMKRPPTSFR Sbjct 1 MAAIAPLVFASAVGGAAPVFPGRTAPVHAVITPVAAVAASGIDLSGPVVIAMKRPPTSFR 60 Query 91 VAVATISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIES 150 VAVATISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIES Sbjct 61 VAVATISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIES 120 Query 151 MHANGGATDARGTAIQPIYGPTLDGTLPGNEIIIQSSVGNRVTYARAMGPMQFLPGTWAR 210 MHANGGATDARGTAIQPIYGPTLDGTLPGNEIIIQSSVGNRVTYARAMGPMQFLPGTWAR Sbjct 121 MHANGGATDARGTAIQPIYGPTLDGTLPGNEIIIQSSVGNRVTYARAMGPMQFLPGTWAR 180 Query 211 YATDGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGW 270 YATDGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGW Sbjct 181 YATDGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGW 240 Query 271 AAGYATGVFPVDLPPITGPPPPLGDAHLENPEGLGPGLPINVNGLTADGPMAHLPLIDLT 330 AAGYATGVFPVDLPPITGPPPPLGDAHLENPEGLGPGLPINVNGLTADGPMAHLPLIDLT Sbjct 241 AAGYATGVFPVDLPPITGPPPPLGDAHLENPEGLGPGLPINVNGLTADGPMAHLPLIDLT 300 Query 331 PRQAALNPPPMFPWMAPDPSAPMPGCTLICIGSHGPPVGAPPFPPTAPPPPFLPAAPPPP 390 PRQAALNPPPMF WMAPDPSAPMPGCTLICIGSHGPPVGAPPFPPTAPPPPFLPAAPPPP Sbjct 301 PRQAALNPPPMFRWMAPDPSAPMPGCTLICIGSHGPPVGAPPFPPTAPPPPFLPAAPPPP 360 Query 391 DPLAGPPGDAGLAPPAPAPAG 411 DPLAGPPGDAGLAPPAPAPAG Sbjct 361 DPLAGPPGDAGLAPPAPAPAG 381 >gi|313658095|ref|ZP_07814975.1| hypothetical protein MtubKV_06729 [Mycobacterium tuberculosis KZN V2475] Length=355 Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/355 (99%), Positives = 355/355 (100%), Gaps = 0/355 (0%) Query 57 VHAVITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAM 116 +HAVITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAM Sbjct 1 MHAVITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAM 60 Query 117 ALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGT 176 ALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGT Sbjct 61 ALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGT 120 Query 177 LPGNEIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARY 236 LPGNEIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARY Sbjct 121 LPGNEIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARY 180 Query 237 LCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDA 296 LCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDA Sbjct 181 LCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDA 240 Query 297 HLENPEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGC 356 HLENPEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGC Sbjct 241 HLENPEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPSAPMPGC 300 Query 357 TLICIGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAPAPAG 411 TLICIGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAPAPAG Sbjct 301 TLICIGSHGPPVGAPPFPPTAPPPPFLPAAPPPPDPLAGPPGDAGLAPPAPAPAG 355 >gi|167967888|ref|ZP_02550165.1| hypothetical protein MtubH3_07573 [Mycobacterium tuberculosis H37Ra] Length=328 Score = 598 bits (1541), Expect = 6e-169, Method: Compositional matrix adjust. Identities = 309/313 (99%), Positives = 310/313 (99%), Gaps = 0/313 (0%) Query 31 VAAIAPLVFASAVGSAAPVFPGRTAPVHAVITPVAAVAASGIDLSGPVVIAMKRPPTSFR 90 +AAIAPLVFASAVGSAAPVFPGRTAPVHAVITPVAAVAASGIDLSGPVVIAMKRPPTSFR Sbjct 1 MAAIAPLVFASAVGSAAPVFPGRTAPVHAVITPVAAVAASGIDLSGPVVIAMKRPPTSFR 60 Query 91 VAVATISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIES 150 VAVATISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIES Sbjct 61 VAVATISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIES 120 Query 151 MHANGGATDARGTAIQPIYGPTLDGTLPGNEIIIQSSVGNRVTYARAMGPMQFLPGTWAR 210 MHANGGATDARGTAIQPIYGPTLDGTLPGNEIIIQSSVGNRVTYARAMGPMQFLPGTWAR Sbjct 121 MHANGGATDARGTAIQPIYGPTLDGTLPGNEIIIQSSVGNRVTYARAMGPMQFLPGTWAR 180 Query 211 YATDGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGW 270 YATDGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGW Sbjct 181 YATDGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGW 240 Query 271 AAGYATGVFPVDLPPITGPPPPLGDAHLENPEGLGPGLPINVNGLTADGPMAHLPLIDLT 330 AAGYATGVFPVDLPPITGPPPPLGDAHLENPEGLGPGLPINVNGLTADGPMAHLPLIDLT Sbjct 241 AAGYATGVFPVDLPPITGPPPPLGDAHLENPEGLGPGLPINVNGLTADGPMAHLPLIDLT 300 Query 331 PRQAALNPPPMFP 343 PRQAALNPP P Sbjct 301 PRQAALNPPTDVP 313 >gi|240173008|ref|ZP_04751666.1| membrane protein [Mycobacterium kansasii ATCC 12478] Length=400 Score = 484 bits (1245), Expect = 2e-134, Method: Compositional matrix adjust. Identities = 275/357 (78%), Positives = 297/357 (84%), Gaps = 4/357 (1%) Query 15 AVRRGACRLTRAPAFGVAAIAPLVFASAVGSAAPVFPGRTAPVHAVITPVAAVAAS-GID 73 +VRR A RLT++P FG+A I PLVFA AV AAP GRT ITPVAAVA S +D Sbjct 4 SVRRRAMRLTKSPVFGIAMITPLVFAGAVSGAAPASHGRTPSARTAITPVAAVAPSPLVD 63 Query 74 LSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAP 133 LSGP VIA+ RPPT F VA AT SAPPPPM+VNSPGALGIP MAL+AYRNAE KMA AAP Sbjct 64 LSGPTVIAVPRPPTGFHVAAATTSAPPPPMVVNSPGALGIPIMALTAYRNAEQKMAVAAP 123 Query 134 GCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGNEIIIQSSVGNRVT 193 CG+SWNLLAGIGRIESMHANGGA D+RGTA+ PIYGP LDGTLPGNE+IIQS +GNRVT Sbjct 124 ACGISWNLLAGIGRIESMHANGGAVDSRGTAVSPIYGPALDGTLPGNEVIIQSMIGNRVT 183 Query 194 YARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQVMAA 253 YARAMGPMQFLPGTWARYA DGD+DGV DPQNLFDSTLAAARYLCSGGLNLRDPAQVMAA Sbjct 184 YARAMGPMQFLPGTWARYAVDGDNDGVPDPQNLFDSTLAAARYLCSGGLNLRDPAQVMAA 243 Query 254 LLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLENPEGLGPGLPINVN 313 +LRYNNSMPYAQNVLGWAA YATGV PVDLPPITGPPPP+GDAHLE+PEGLGP LP+NVN Sbjct 244 ILRYNNSMPYAQNVLGWAAAYATGVVPVDLPPITGPPPPIGDAHLEHPEGLGPNLPMNVN 303 Query 314 GLTADGPMAHLPLIDLTPRQAALNPPPMFPWM---APDPSAPMPGCTLICIGSHGPP 367 GL A PM H+PLID P Q PPP++PW+ AP P AP PGCTLICI PP Sbjct 304 GLGAFDPMGHIPLIDFGPPQLPNTPPPLWPWLQQPAPQPQAPQPGCTLICITPQNPP 360 >gi|118619616|ref|YP_907948.1| membrane protein [Mycobacterium ulcerans Agy99] gi|118571726|gb|ABL06477.1| membrane protein [Mycobacterium ulcerans Agy99] Length=468 Score = 483 bits (1243), Expect = 3e-134, Method: Compositional matrix adjust. Identities = 263/364 (73%), Positives = 294/364 (81%), Gaps = 4/364 (1%) Query 1 VHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGSAAPVFPGRTAPVHAV 60 + IGGRW A PAVA+VR+ A R + P FG+A I PLVFA AVG+ AP G+T V A Sbjct 1 MRIGGRWVAHPAVASVRQRALR-AKTPVFGIAMITPLVFAGAVGATAPASYGKTPAVRAA 59 Query 61 ITPVAAVAAS-GIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALS 119 ITPVAAVA S IDLSGP ++A++RPPT+F +A T +APPP +VN+PGALGIP MAL+ Sbjct 60 ITPVAAVAPSPAIDLSGPSIVAVERPPTNFHIAAGTTAAPPPARVVNAPGALGIPIMALT 119 Query 120 AYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPG 179 AYRNAE KMA AAP CG+SWNLLAGIGRIESMHANGGA D RGTA+ PIYGP LDGTLPG Sbjct 120 AYRNAEQKMATAAPACGISWNLLAGIGRIESMHANGGAVDERGTAVNPIYGPALDGTLPG 179 Query 180 NEIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCS 239 NE+IIQS VGNRVTYARAMGPMQFLPGTWARYA+DGD DGV DPQN+FDSTLAAARYLCS Sbjct 180 NEVIIQSKVGNRVTYARAMGPMQFLPGTWARYASDGDSDGVPDPQNIFDSTLAAARYLCS 239 Query 240 GGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLE 299 GGLNLRDP QVMAA+LRYNNSMPYAQNVLGWAA YATGV PVDLPPITGPPPP+GDAHLE Sbjct 240 GGLNLRDPGQVMAAILRYNNSMPYAQNVLGWAAAYATGVLPVDLPPITGPPPPIGDAHLE 299 Query 300 NPEGLGPGLPINVNGLTADGPMAHLPLID--LTPRQAALNPPPMFPWMAPDPSAPMPGCT 357 +PEGLGP LP+N NGL P++H+PLID A P + P P AP PGCT Sbjct 300 HPEGLGPNLPLNANGLEPADPLSHMPLIDFAPPQMPAPPPPMFPWMQPTPQPLAPQPGCT 359 Query 358 LICI 361 LIC+ Sbjct 360 LICV 363 >gi|183984183|ref|YP_001852474.1| membrane protein [Mycobacterium marinum M] gi|183177509|gb|ACC42619.1| membrane protein [Mycobacterium marinum M] Length=457 Score = 482 bits (1240), Expect = 5e-134, Method: Compositional matrix adjust. Identities = 263/364 (73%), Positives = 294/364 (81%), Gaps = 4/364 (1%) Query 1 VHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGSAAPVFPGRTAPVHAV 60 + IGGRW A PAVA+VR+ A R + P FG+A I PLVFA AVG+ AP G+T V A Sbjct 1 MRIGGRWVAHPAVASVRQRALR-AKTPVFGIAMITPLVFAGAVGATAPASYGKTPAVRAA 59 Query 61 ITPVAAVAAS-GIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALS 119 ITPVAAVA S IDLSGP ++A++RPPT+F +A T +APPP +VN+PGALGIP MAL+ Sbjct 60 ITPVAAVAPSPAIDLSGPSIVAVERPPTNFHIAAGTTAAPPPARVVNAPGALGIPIMALT 119 Query 120 AYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPG 179 AYRNAE KMA AAP CG+SWNLLAGIGRIESMHANGGA D RGTA+ PIYGP LDGTLPG Sbjct 120 AYRNAEQKMATAAPACGISWNLLAGIGRIESMHANGGAVDERGTAVNPIYGPALDGTLPG 179 Query 180 NEIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCS 239 NE+IIQS VGNRVTYARAMGPMQFLPGTWARYA+DGD DGV DPQN+FDSTLAAARYLCS Sbjct 180 NEVIIQSKVGNRVTYARAMGPMQFLPGTWARYASDGDSDGVPDPQNIFDSTLAAARYLCS 239 Query 240 GGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLE 299 GGLNLRDP QVMAA+LRYNNSMPYAQNVLGWAA YATGV PVDLPPITGPPPP+GDAHLE Sbjct 240 GGLNLRDPGQVMAAILRYNNSMPYAQNVLGWAAAYATGVLPVDLPPITGPPPPIGDAHLE 299 Query 300 NPEGLGPGLPINVNGLTADGPMAHLPLID--LTPRQAALNPPPMFPWMAPDPSAPMPGCT 357 +PEGLGP LP+N NGL P++H+PLID A P + P P AP PGCT Sbjct 300 HPEGLGPNLPLNANGLGPADPLSHMPLIDFAPPQMPAPPPPMFPWMQPTPQPLAPQPGCT 359 Query 358 LICI 361 LIC+ Sbjct 360 LICV 363 >gi|41408650|ref|NP_961486.1| hypothetical protein MAP2552 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397008|gb|AAS04869.1| hypothetical protein MAP_2552 [Mycobacterium avium subsp. paratuberculosis K-10] Length=454 Score = 476 bits (1226), Expect = 2e-132, Method: Compositional matrix adjust. Identities = 266/367 (73%), Positives = 299/367 (82%), Gaps = 4/367 (1%) Query 1 VHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGSAAPVFPGRTAPVHAV 60 + IGG GA PA A VR+ A R TR P FG+A I PLVFA AV + P P RT PVHA Sbjct 1 MRIGGSRGADPAAATVRQRALRNTRKPIFGIAMITPLVFAGAVSATGPSLPVRTPPVHAA 60 Query 61 ITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSA 120 +TPVAAV+ + DL+GP V+A+ R PT+F VA +SAPPP IVN+PGALGIP++AL+A Sbjct 61 VTPVAAVSPTFPDLAGPAVVAIDRGPTAFHVAEPALSAPPPAAIVNAPGALGIPSIALAA 120 Query 121 YRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGN 180 YRNAE KMA AAPGCGVSWNLLAGIGRIES HA GGA DARGTAI PIYGP+LDGTLPGN Sbjct 121 YRNAEQKMAVAAPGCGVSWNLLAGIGRIESGHAGGGAVDARGTAITPIYGPSLDGTLPGN 180 Query 181 EIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSG 240 E+IIQS+ GNRVTYARAMGPMQFLPGTWARYA+DG DGVADPQNLFDSTLAAARYLCSG Sbjct 181 EVIIQSAAGNRVTYARAMGPMQFLPGTWARYASDGKGDGVADPQNLFDSTLAAARYLCSG 240 Query 241 GLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLEN 300 GLNLRD +QV+ A+LRYNNSMPYAQNVLGWAA YATGV PVDLPP+TGPPPPLGDAHLE+ Sbjct 241 GLNLRDQSQVLTAILRYNNSMPYAQNVLGWAAAYATGVVPVDLPPMTGPPPPLGDAHLEH 300 Query 301 PEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPS---APMPGCT 357 PEGLGP LP+N+NGL D P+A +PLIDL+ A +P PMFPWM P P +PGCT Sbjct 301 PEGLGPNLPMNINGLPLDDPLARVPLIDLS-SPALGSPQPMFPWMTPTPQQAPTQVPGCT 359 Query 358 LICIGSH 364 +ICI S Sbjct 360 VICISSQ 366 >gi|342862109|ref|ZP_08718752.1| hypothetical protein MCOL_24581 [Mycobacterium colombiense CECT 3035] gi|342130413|gb|EGT83728.1| hypothetical protein MCOL_24581 [Mycobacterium colombiense CECT 3035] Length=393 Score = 465 bits (1196), Expect = 7e-129, Method: Compositional matrix adjust. Identities = 235/311 (76%), Positives = 266/311 (86%), Gaps = 4/311 (1%) Query 58 HAVITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMA 117 HA +TPVAAV+ + DL+GP V+A+ R PT F VA +SAPPP MIVN+PGALGIP++A Sbjct 5 HAAVTPVAAVSPTFPDLTGPAVVAIDRGPTVFHVAEPALSAPPPAMIVNAPGALGIPSIA 64 Query 118 LSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTL 177 L+AYR+AE KMA AAPGCGVSWNLLAGIGRIES HA GGA DARGTAI+PIYGP+LDGTL Sbjct 65 LAAYRSAEQKMAVAAPGCGVSWNLLAGIGRIESGHAGGGAVDARGTAIRPIYGPSLDGTL 124 Query 178 PGNEIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYL 237 PGNE IIQSS GNRVTYARAMGPMQFLPGTWARYA+DG DGVADPQN+FD+TLAAARYL Sbjct 125 PGNETIIQSSAGNRVTYARAMGPMQFLPGTWARYASDGKGDGVADPQNIFDATLAAARYL 184 Query 238 CSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAH 297 CSGGLNLRD +QV+ A+LRYNNSMPYAQNVLGWAA YATGV PVDLP +TGPPPPLGDAH Sbjct 185 CSGGLNLRDQSQVLTAILRYNNSMPYAQNVLGWAAAYATGVVPVDLPLMTGPPPPLGDAH 244 Query 298 LENPEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPDPS---APMP 354 LE+PEGLGP LP+N+NGL D P+A +PLIDL+ A ++PPPMFPWM P P A +P Sbjct 245 LEHPEGLGPNLPMNINGLPLDDPLARVPLIDLS-SPALVSPPPMFPWMTPTPQQAPAQIP 303 Query 355 GCTLICIGSHG 365 GCT+ICI S G Sbjct 304 GCTVICISSQG 314 >gi|254823043|ref|ZP_05228044.1| hypothetical protein MintA_24155 [Mycobacterium intracellulare ATCC 13950] Length=359 Score = 459 bits (1182), Expect = 3e-127, Method: Compositional matrix adjust. Identities = 248/331 (75%), Positives = 279/331 (85%), Gaps = 4/331 (1%) Query 37 LVFASAVGSAAPVFPGRTAPVHAVITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATI 96 +VFA AV AAP P PVHA +TPVAAV+ S DLSGP V+ + R PT+F VA + Sbjct 1 MVFAGAVSGAAPELPAHMPPVHAAVTPVAAVSPSFPDLSGPAVVPIDRSPTAFHVAEPAL 60 Query 97 SAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGG 156 SAPPP MIVN+ GALGIP++AL+AYRNAE KMA AAPGCGVSWNLLAGIGRIES HA GG Sbjct 61 SAPPPAMIVNARGALGIPSIALAAYRNAEQKMAVAAPGCGVSWNLLAGIGRIESGHAGGG 120 Query 157 ATDARGTAIQPIYGPTLDGTLPGNEIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGD 216 A DARGTAI PIYGP+LDGTLPGNE+IIQSS G+RVTYARAMGPMQFLPGTWARYA+DG Sbjct 121 AVDARGTAINPIYGPSLDGTLPGNEVIIQSSAGSRVTYARAMGPMQFLPGTWARYASDGK 180 Query 217 DDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYAT 276 DGVADPQNLFDSTLAAARYLCSGGLNLRD +QV+AA+LRYNNSMPYAQNVLGWAA YAT Sbjct 181 GDGVADPQNLFDSTLAAARYLCSGGLNLRDQSQVLAAILRYNNSMPYAQNVLGWAAAYAT 240 Query 277 GVFPVDLPPITGPPPPLGDAHLENPEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAAL 336 GV PVDLPP+TGPPPPLGDAHLE+PEGLGP LP+N+NGL D P+A +PLIDL+ A + Sbjct 241 GVVPVDLPPMTGPPPPLGDAHLEHPEGLGPNLPMNINGLPMDDPLARVPLIDLS-SPAMV 299 Query 337 NPPPMFPWMAPDPS---APMPGCTLICIGSH 364 +PPPMFPWM+P P +PGCT+ICIG+ Sbjct 300 SPPPMFPWMSPTPQQAPTQLPGCTVICIGTQ 330 >gi|118466691|ref|YP_880613.1| hypothetical protein MAV_1369 [Mycobacterium avium 104] gi|118167978|gb|ABK68875.1| conserved hypothetical protein [Mycobacterium avium 104] Length=413 Score = 445 bits (1145), Expect = 6e-123, Method: Compositional matrix adjust. Identities = 248/333 (75%), Positives = 278/333 (84%), Gaps = 4/333 (1%) Query 34 IAPLVFASAVGSAAPVFPGRTAPVHAVITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAV 93 I PLVFA AV + P P RT PVHA +TPVAAV+ + DL+GP V+A+ R PT+F VA Sbjct 2 ITPLVFAGAVSATGPSLPVRTPPVHAAVTPVAAVSPTFPDLTGPAVVAIDRGPTAFHVAE 61 Query 94 ATISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHA 153 +SAPPP IVN+PGALGIP++AL+AYRNAE KMA AAPGCGVSWNLLAGIGRIES HA Sbjct 62 PALSAPPPAAIVNAPGALGIPSIALAAYRNAEQKMAVAAPGCGVSWNLLAGIGRIESGHA 121 Query 154 NGGATDARGTAIQPIYGPTLDGTLPGNEIIIQSSVGNRVTYARAMGPMQFLPGTWARYAT 213 GGA DARGTAI PIYGP+LDGTLPGNE+IIQS+ GNRVTYARAMGPMQFLPGTWARYA+ Sbjct 122 GGGAVDARGTAITPIYGPSLDGTLPGNEVIIQSAAGNRVTYARAMGPMQFLPGTWARYAS 181 Query 214 DGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAG 273 DG DGVADPQNLFDSTLAAARYLCSGGLNLRD +QV+ A+LRYNNSMPYAQNVLGWAA Sbjct 182 DGKGDGVADPQNLFDSTLAAARYLCSGGLNLRDQSQVLTAILRYNNSMPYAQNVLGWAAA 241 Query 274 YATGVFPVDLPPITGPPPPLGDAHLENPEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQ 333 YATGV PVDLPP+TGPPPPLGDAHLE+PEGLGP LP+N+NGL D P+A +PLIDL+ Sbjct 242 YATGVVPVDLPPMTGPPPPLGDAHLEHPEGLGPNLPMNINGLPLDDPLARVPLIDLS-SP 300 Query 334 AALNPPPMFPWMAPDPS---APMPGCTLICIGS 363 A +P PMFPWM P P +PGCT+ICI S Sbjct 301 ALGSPQPMFPWMTPTPQQAPTQVPGCTVICISS 333 >gi|336458561|gb|EGO37528.1| membrane-bound lytic murein transglycosylase B [Mycobacterium avium subsp. paratuberculosis S397] Length=412 Score = 445 bits (1144), Expect = 8e-123, Method: Compositional matrix adjust. Identities = 248/333 (75%), Positives = 278/333 (84%), Gaps = 4/333 (1%) Query 34 IAPLVFASAVGSAAPVFPGRTAPVHAVITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAV 93 I PLVFA AV + P P RT PVHA +TPVAAV+ + DL+GP V+A+ R PT+F VA Sbjct 2 ITPLVFAGAVSATGPSLPVRTPPVHAAVTPVAAVSPTFPDLAGPAVVAIDRGPTAFHVAE 61 Query 94 ATISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHA 153 +SAPPP IVN+PGALGIP++AL+AYRNAE KMA AAPGCGVSWNLLAGIGRIES HA Sbjct 62 PALSAPPPAAIVNAPGALGIPSIALAAYRNAEQKMAVAAPGCGVSWNLLAGIGRIESGHA 121 Query 154 NGGATDARGTAIQPIYGPTLDGTLPGNEIIIQSSVGNRVTYARAMGPMQFLPGTWARYAT 213 GGA DARGTAI PIYGP+LDGTLPGNE+IIQS+ GNRVTYARAMGPMQFLPGTWARYA+ Sbjct 122 GGGAVDARGTAITPIYGPSLDGTLPGNEVIIQSAAGNRVTYARAMGPMQFLPGTWARYAS 181 Query 214 DGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAG 273 DG DGVADPQNLFDSTLAAARYLCSGGLNLRD +QV+ A+LRYNNSMPYAQNVLGWAA Sbjct 182 DGKGDGVADPQNLFDSTLAAARYLCSGGLNLRDQSQVLTAILRYNNSMPYAQNVLGWAAA 241 Query 274 YATGVFPVDLPPITGPPPPLGDAHLENPEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQ 333 YATGV PVDLPP+TGPPPPLGDAHLE+PEGLGP LP+N+NGL D P+A +PLIDL+ Sbjct 242 YATGVVPVDLPPMTGPPPPLGDAHLEHPEGLGPNLPMNINGLPLDDPLARVPLIDLS-SP 300 Query 334 AALNPPPMFPWMAPDPS---APMPGCTLICIGS 363 A +P PMFPWM P P +PGCT+ICI S Sbjct 301 ALGSPQPMFPWMTPTPQQAPTQVPGCTVICISS 333 >gi|254774247|ref|ZP_05215763.1| hypothetical protein MaviaA2_06200 [Mycobacterium avium subsp. avium ATCC 25291] Length=413 Score = 443 bits (1139), Expect = 3e-122, Method: Compositional matrix adjust. Identities = 247/333 (75%), Positives = 277/333 (84%), Gaps = 4/333 (1%) Query 34 IAPLVFASAVGSAAPVFPGRTAPVHAVITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAV 93 I PLVFA AV + P P R PVHA +TPVAAV+ + DL+GP V+A+ R PT+F VA Sbjct 2 ITPLVFAGAVSATGPSLPVRMPPVHAAVTPVAAVSPTFPDLTGPAVVAIDRGPTAFHVAE 61 Query 94 ATISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHA 153 +SAPPP IVN+PGALGIP++AL+AYRNAE KMA AAPGCGVSWNLLAGIGRIES HA Sbjct 62 PALSAPPPAAIVNAPGALGIPSIALAAYRNAEQKMAVAAPGCGVSWNLLAGIGRIESGHA 121 Query 154 NGGATDARGTAIQPIYGPTLDGTLPGNEIIIQSSVGNRVTYARAMGPMQFLPGTWARYAT 213 GGA DARGTAI PIYGP+LDGTLPGNE+IIQS+ GNRVTYARAMGPMQFLPGTWARYA+ Sbjct 122 GGGAVDARGTAITPIYGPSLDGTLPGNEVIIQSAAGNRVTYARAMGPMQFLPGTWARYAS 181 Query 214 DGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAG 273 DG DGVADPQNLFDSTLAAARYLCSGGLNLRD +QV+ A+LRYNNSMPYAQNVLGWAA Sbjct 182 DGKGDGVADPQNLFDSTLAAARYLCSGGLNLRDQSQVLTAILRYNNSMPYAQNVLGWAAA 241 Query 274 YATGVFPVDLPPITGPPPPLGDAHLENPEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQ 333 YATGV PVDLPP+TGPPPPLGDAHLE+PEGLGP LP+N+NGL D P+A +PLIDL+ Sbjct 242 YATGVVPVDLPPMTGPPPPLGDAHLEHPEGLGPNLPMNINGLPLDDPLARVPLIDLS-SP 300 Query 334 AALNPPPMFPWMAPDPS---APMPGCTLICIGS 363 A +P PMFPWM P P +PGCT+ICI S Sbjct 301 ALGSPQPMFPWMTPTPQQAPTQVPGCTVICISS 333 >gi|108800953|ref|YP_641150.1| hypothetical protein Mmcs_3989 [Mycobacterium sp. MCS] gi|119870093|ref|YP_940045.1| hypothetical protein Mkms_4063 [Mycobacterium sp. KMS] gi|126436578|ref|YP_001072269.1| hypothetical protein Mjls_4003 [Mycobacterium sp. JLS] gi|108771372|gb|ABG10094.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696182|gb|ABL93255.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126236378|gb|ABN99778.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=443 Score = 413 bits (1061), Expect = 3e-113, Method: Compositional matrix adjust. Identities = 216/335 (65%), Positives = 258/335 (78%), Gaps = 5/335 (1%) Query 22 RLTRAPAFGVAAIAPLVFASAVGSAAPVFPGRTAPVHAVITPVAAVAASGIDLSGPVVIA 81 + R PA GV +APLV A AVG+ +P + +A +TP+AAV S + +GP V+A Sbjct 10 KALRKPAAGVFILAPLVLAGAVGATSPALQHSVS--NAAVTPLAAVETSPRNSAGPSVVA 67 Query 82 MKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNL 141 +K+ P++FR+A +T+S+PPP ++VNSPG+L IPAMALSAYRNAE MAAA P CGVSWNL Sbjct 68 VKKSPSAFRIAASTVSSPPPAVVVNSPGSLKIPAMALSAYRNAERMMAAAVPNCGVSWNL 127 Query 142 LAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGNEIIIQSSVGNRVTYARAMGPM 201 LAGIGRIES HA+GGATD+RGTA+ PIYGP LDGTL GNE+I S NRVTYARAMGPM Sbjct 128 LAGIGRIESGHASGGATDSRGTAVTPIYGPALDGTLAGNEVIELSRSANRVTYARAMGPM 187 Query 202 QFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSM 261 QFLPGTWARYA+DGD DG AD QNL+DSTLAAARYLCSGGLNLRDP+QVM+A+LRYNNS+ Sbjct 188 QFLPGTWARYASDGDGDGRADVQNLYDSTLAAARYLCSGGLNLRDPSQVMSAILRYNNSV 247 Query 262 PYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLENPEGLGPGLPINVNGLTADGPM 321 YA+NVL WA GYATGV PVDLPPI GP P +GD+HLE +GLGPG P+N GL AD P+ Sbjct 248 AYARNVLSWAGGYATGVVPVDLPPINGPVPAMGDSHLEANKGLGPGAPVNATGLPADDPL 307 Query 322 AHLPLIDLTPRQAALNPPPMFPWMAPDPS-APMPG 355 A +PL L+ A+ P P AP P+PG Sbjct 308 ALVPL--LSRNDASRMPGTNVPGFAPGQRLGPLPG 340 >gi|118473902|ref|YP_889317.1| hypothetical protein MSMEG_5067 [Mycobacterium smegmatis str. MC2 155] gi|118175189|gb|ABK76085.1| secreted protein [Mycobacterium smegmatis str. MC2 155] Length=433 Score = 395 bits (1014), Expect = 1e-107, Method: Compositional matrix adjust. Identities = 222/324 (69%), Positives = 254/324 (79%), Gaps = 5/324 (1%) Query 6 RWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGSAAPVFPGRTAPVHAVITPVA 65 R G A+ A R A R R P G AA+APL+ A AVG++AP G + A +TP+A Sbjct 2 RIGGGAAIQAARHRAGRFMRTPMVGAAALAPLILAGAVGASAPPHHGSS---DAAVTPLA 58 Query 66 AVAASGIDLSGPVVIAMKRPPTSFRVAVAT-ISAPPPPMIVNSPGALGIPAMALSAYRNA 124 AV ID GP V+A + PT F +A T +SAPPP ++VNSPGALGIP MAL+AYRNA Sbjct 59 AVQPQ-IDHDGPAVVAAAKAPTKFHIATTTAVSAPPPAVVVNSPGALGIPGMALNAYRNA 117 Query 125 ELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGNEIII 184 E MAAA PGCGVSWNLLAGIGRIESMHANGG TDARGTA++PIYGP LDGTLPGNEII+ Sbjct 118 ERMMAAAYPGCGVSWNLLAGIGRIESMHANGGQTDARGTAVRPIYGPALDGTLPGNEIIV 177 Query 185 QSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSGGLNL 244 QS+ RVTYARAMGPMQFLPGTWARYA+DGD DG AD QNLFD++LAAARYLCSGGLNL Sbjct 178 QSAQAGRVTYARAMGPMQFLPGTWARYASDGDGDGKADVQNLFDASLAAARYLCSGGLNL 237 Query 245 RDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLENPEGL 304 RD +QVM A+LRYNNS+ YA+NVLGWAA YATGV PVDLPPITG P LGD+HLE EGL Sbjct 238 RDQSQVMTAILRYNNSIAYARNVLGWAAAYATGVVPVDLPPITGEIPALGDSHLERKEGL 297 Query 305 GPGLPINVNGLTADGPMAHLPLID 328 GPGLP+N GL D P+A +P++D Sbjct 298 GPGLPVNALGLPPDDPLALIPVLD 321 >gi|120405442|ref|YP_955271.1| lytic transglycosylase catalytic subunit [Mycobacterium vanbaalenii PYR-1] gi|119958260|gb|ABM15265.1| Lytic transglycosylase, catalytic [Mycobacterium vanbaalenii PYR-1] Length=447 Score = 392 bits (1008), Expect = 4e-107, Method: Compositional matrix adjust. Identities = 210/341 (62%), Positives = 251/341 (74%), Gaps = 10/341 (2%) Query 1 VHIGGRWGARPAVAAVRRGACRLTRAPAFGVAAIAPLVFASAVGSAAPVFPGRTAPVH-A 59 +HI R GA A+ R+ R PAFGVAA+ L G+ P T P + Sbjct 1 MHI--RGGA--ALVTARQRTGHFIRMPAFGVAAV--LTPLVLAGAVGAAAPSTTTPTRDS 54 Query 60 VITPVAAVAASGIDLSGPVVIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALS 119 + P+AAVA S D SGP V+A+ + P R +T +APPPPMI+NSPG L IP+MAL+ Sbjct 55 AVMPLAAVAPSADDRSGPSVVAVAKAPAPLRTVASTATAPPPPMILNSPGTLRIPSMALA 114 Query 120 AYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPG 179 AYRNAE MAAA PGCG+SWNLLAGIGRIESMHA GGATD+RGTA++PIYGP LDGTLPG Sbjct 115 AYRNAETTMAAAQPGCGLSWNLLAGIGRIESMHAYGGATDSRGTAVRPIYGPALDGTLPG 174 Query 180 NEIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCS 239 NE+I+QS +RV YARAMGPMQFLPGTW+RYA+DGD DG AD QNLFD+TLAAARYLCS Sbjct 175 NEVIVQSRAADRVVYARAMGPMQFLPGTWSRYASDGDGDGKADVQNLFDATLAAARYLCS 234 Query 240 GGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPL---GDA 296 GG+NLR+ V+AA+LRYNNSM Y QNVL WAA YATGV PVDLPPITG P L GD+ Sbjct 235 GGMNLRNQPDVIAAILRYNNSMAYTQNVLSWAAAYATGVVPVDLPPITGEVPALGTIGDS 294 Query 297 HLENPEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALN 337 HL+ PEG+GPGLP+N GL A+ P++ +PL+ T + +N Sbjct 295 HLDRPEGIGPGLPLNATGLPANDPLSLIPLMTRTDVASQIN 335 >gi|296170131|ref|ZP_06851729.1| secreted protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895193|gb|EFG74907.1| secreted protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=248 Score = 382 bits (982), Expect = 4e-104, Method: Compositional matrix adjust. Identities = 201/248 (82%), Positives = 220/248 (89%), Gaps = 1/248 (0%) Query 103 MIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARG 162 MIVN+PGALGIP++AL+AYR+AE KMA AAP CGVSWNLLAGIGRIES HA GGA DARG Sbjct 1 MIVNAPGALGIPSIALAAYRSAEQKMAVAAPNCGVSWNLLAGIGRIESGHAGGGAVDARG 60 Query 163 TAIQPIYGPTLDGTLPGNEIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVAD 222 TA+ PIYGP LDGTLPGNEII+QSS GNR TYARAMGPMQFLPGTWARYA+DG DGVAD Sbjct 61 TAVVPIYGPALDGTLPGNEIILQSSAGNRPTYARAMGPMQFLPGTWARYASDGKGDGVAD 120 Query 223 PQNLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVD 282 PQNLFDSTLAAARYLCSGGLNLRDP+QVMAA+LRYNNSM YAQNVLGWA+ YATGV PVD Sbjct 121 PQNLFDSTLAAARYLCSGGLNLRDPSQVMAAILRYNNSMAYAQNVLGWASAYATGVVPVD 180 Query 283 LPPITGPPPPLGDAHLENPEGLGPGLPINVNGLTADGPMAHLPLIDLTPRQAALNPPPMF 342 LPP+TGPPPPL DAHLE+ EGLGP LP+N+NGL +D P+A +PLIDL+ Q A PPPMF Sbjct 181 LPPMTGPPPPLADAHLEHAEGLGPNLPMNINGLPSDDPLARMPLIDLSQPQNA-GPPPMF 239 Query 343 PWMAPDPS 350 PWMAP P Sbjct 240 PWMAPAPQ 247 >gi|315443261|ref|YP_004076140.1| membrane-bound lytic murein transglycosylase B [Mycobacterium sp. Spyr1] gi|315261564|gb|ADT98305.1| membrane-bound lytic murein transglycosylase B [Mycobacterium sp. Spyr1] Length=441 Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 202/333 (61%), Positives = 244/333 (74%), Gaps = 12/333 (3%) Query 15 AVRRGACRLTRAPAFGVAAI-APLVFASAVGSAAPVFPGRTAPVHAVITPVAAVAASGID 73 A RR A ++ R PA GVAAI PLV A AVG++AP +T A + P+AAVA S + Sbjct 2 AARRRAGQIVRNPAVGVAAILTPLVLAGAVGASAPTT--QTPTRDAAVLPLAAVAPSADE 59 Query 74 LSGPVVIAMKRPPTSFRVAVAT-ISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAA 132 SG V+A+ + P+ R T S P PP I+N+PG L IP++ L+AYRNAE MAAA Sbjct 60 RSGLSVVAVAKAPSPLRTVAGTAASGPTPPTILNAPGTLRIPSVNLAAYRNAETMMAAAY 119 Query 133 PGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGNEIIIQSSVGNRV 192 PGCGVSWNLLAGIGRIESMH+ GGATD+RGTA++PIYGPTLDGTLPGNE+I++S +RV Sbjct 120 PGCGVSWNLLAGIGRIESMHSYGGATDSRGTAVRPIYGPTLDGTLPGNEVIVESRSSDRV 179 Query 193 TYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQVMA 252 YARAMGPMQFLPGTW+RYA DGD DG AD QN++D+ L AARYLCSGGLNLR+ A VMA Sbjct 180 VYARAMGPMQFLPGTWSRYAADGDGDGKADVQNIYDAALGAARYLCSGGLNLRNQADVMA 239 Query 253 ALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLG--------DAHLENPEGL 304 A+LRYNNSM YAQNVL WAA YATGV P++LPPITG P L AHL+ GL Sbjct 240 AILRYNNSMSYAQNVLSWAAAYATGVVPLELPPITGSVPELDATATTATLTAHLDRRAGL 299 Query 305 GPGLPINVNGLTADGPMAHLPLIDLTPRQAALN 337 GPGLP+ GL A+ P+A +PL++ T + +N Sbjct 300 GPGLPLTATGLPANDPLALIPLMERTDVASQIN 332 >gi|145222794|ref|YP_001133472.1| lytic transglycosylase catalytic subunit [Mycobacterium gilvum PYR-GCK] gi|145215280|gb|ABP44684.1| lytic transglycosylase, catalytic [Mycobacterium gilvum PYR-GCK] Length=439 Score = 359 bits (922), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 200/332 (61%), Positives = 241/332 (73%), Gaps = 12/332 (3%) Query 15 AVRRGACRLTRAPAFGVAAI-APLVFASAVGSAAPVFPGRTAPVHAVITPVAAVAASGID 73 A RR A + R PA GVAA+ PLV A AVG++AP T A + P+AAVA S + Sbjct 2 AARRRAGQFVRNPAVGVAAVLTPLVLAGAVGASAPT---HTPTRDAAVLPLAAVAPSADE 58 Query 74 LSGPVVIAMKRPPTSFRVAVAT-ISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAA 132 +G V+A+ + P R T S P PP I+N+PG L IP++ L+AYRNAE MAAA Sbjct 59 RAGISVVAVAKAPAPLRTVAGTAASGPTPPTILNAPGTLRIPSVNLAAYRNAETMMAAAY 118 Query 133 PGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGNEIIIQSSVGNRV 192 PGCGVSWNLLAGIGRIESMH+ GGATD+RGTA++PIYGPTLDGTLPGNE+I++S +RV Sbjct 119 PGCGVSWNLLAGIGRIESMHSYGGATDSRGTAVRPIYGPTLDGTLPGNEVIVESRSADRV 178 Query 193 TYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQVMA 252 YARAMGPMQFLPGTW+RYA DGD DG AD QN++D+ L AARYLCSGGLNLR+ A VMA Sbjct 179 VYARAMGPMQFLPGTWSRYAADGDGDGKADVQNIYDAALGAARYLCSGGLNLRNQADVMA 238 Query 253 ALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPP-------PLGDAHLENPEGLG 305 A+LRYNNSM YAQNVL WAA YATGV P++LPPITG P AHL+ GLG Sbjct 239 AILRYNNSMSYAQNVLSWAAAYATGVVPLELPPITGSVPELEAATTATLTAHLDRRAGLG 298 Query 306 PGLPINVNGLTADGPMAHLPLIDLTPRQAALN 337 PGLP+N GL A+ P+A +PL++ T + +N Sbjct 299 PGLPLNATGLPANDPLALIPLMERTDVASQIN 330 >gi|289749772|ref|ZP_06509150.1| LOW QUALITY PROTEIN: membrane protein [Mycobacterium tuberculosis T92] gi|289690359|gb|EFD57788.1| LOW QUALITY PROTEIN: membrane protein [Mycobacterium tuberculosis T92] Length=209 Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 191/191 (100%), Positives = 191/191 (100%), Gaps = 0/191 (0%) Query 130 AAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGNEIIIQSSVG 189 AAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGNEIIIQSSVG Sbjct 4 AAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGNEIIIQSSVG 63 Query 190 NRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQ 249 NRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQ Sbjct 64 NRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQ 123 Query 250 VMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLENPEGLGPGLP 309 VMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLENPEGLGPGLP Sbjct 124 VMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPPPPLGDAHLENPEGLGPGLP 183 Query 310 INVNGLTADGP 320 INVNGLTADGP Sbjct 184 INVNGLTADGP 194 >gi|333989840|ref|YP_004522454.1| hypothetical protein JDM601_1200 [Mycobacterium sp. JDM601] gi|333485808|gb|AEF35200.1| membrane protein [Mycobacterium sp. JDM601] Length=461 Score = 345 bits (886), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 211/349 (61%), Positives = 252/349 (73%), Gaps = 20/349 (5%) Query 29 FGVAAIAPLVFASAVGSAAPVFPGRTAPV-HAVITPVAAV--AASGIDLSGPVVIAMKRP 85 FG+ I PLVFA AVG A P P + P+ +A +TP+AA ASG SGP V+A++RP Sbjct 29 FGLTFITPLVFAGAVG-ATPRSPSTSLPLRNAAVTPLAAAIDTASGRS-SGPAVVAVQRP 86 Query 86 PTSFRVAVATISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGI 145 + VA SAPP ++ +PG LGIP AL+AYRNAE +MA AAPGCGVSWNLLAGI Sbjct 87 QPNLHVAAGAPSAPPAAVVY-APGTLGIPKTALAAYRNAEHQMAVAAPGCGVSWNLLAGI 145 Query 146 GRIESMHANGGATDARGTAIQPIYGPTLDGTLPGNEIIIQSSVGNRVTYARAMGPMQFLP 205 GRIES HANGGATDARGTA+QPIYGP+LDGTLPGNE+I+ SS RV YARAMGPMQFLP Sbjct 146 GRIESQHANGGATDARGTALQPIYGPSLDGTLPGNEVIVASSGPGRVVYARAMGPMQFLP 205 Query 206 GTWARYATDGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQ 265 GTW+RYA DGD DG ADPQN++D+TLAAARYLCSGGLNLR+ +QV+ A+LRYNNSM YA+ Sbjct 206 GTWSRYAADGDGDGKADPQNVYDATLAAARYLCSGGLNLREHSQVLTAILRYNNSMAYAE 265 Query 266 NVLGWAAGYATGVFPVDLPPITGPPPPLGD---AHLENPEGLGPGLPINVNGLTADGPMA 322 NV+GWAA YATGV PVDLPPI GP PP+ D HLE+PEGLGP ++++GL+ A Sbjct 266 NVMGWAAAYATGVAPVDLPPIIGPAPPIADLHLEHLEHPEGLGP-ESLSMHGLSPVHETA 324 Query 323 HLPLIDLTPRQAALNPPPMFPWMAPDPSA----------PMPGCTLICI 361 LI+L A P PW+AP +A P C +IC+ Sbjct 325 GSSLINLGQSSGADGPMANLPWLAPWMNAAEQQQQQLPRPSAACRMICL 373 >gi|169628458|ref|YP_001702107.1| hypothetical protein MAB_1367c [Mycobacterium abscessus ATCC 19977] gi|169240425|emb|CAM61453.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=427 Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 183/316 (58%), Positives = 220/316 (70%), Gaps = 9/316 (2%) Query 79 VIAMKRPPTSFRVAVATISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVS 138 ++ + RPPT +R+A + APPPP IV +PG LGIP +AL AY+NAE MA AAPGCGVS Sbjct 80 LVTVVRPPTQYRIAPSAAIAPPPPGIVMAPGGLGIPKIALEAYQNAEKMMAKAAPGCGVS 139 Query 139 WNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGTLPGNEIII---QSSVGNRVTYA 195 WNLLAGIGRIES HAN GATD +G ++PIYGP+LDGTLPGNE+I+ QS Y Sbjct 140 WNLLAGIGRIESGHANNGATDVKGRVVRPIYGPSLDGTLPGNEVIVDHEQSRTQGAQVYV 199 Query 196 RAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQVMAALL 255 RAMGPMQFLP TW YA+DGD DG ADPQN+FD++LAAARYLCSGGLNLRD +Q M+A+L Sbjct 200 RAMGPMQFLPSTWNHYASDGDGDGKADPQNVFDASLAAARYLCSGGLNLRDRSQTMSAIL 259 Query 256 RYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPP-PPLGDAHLENPE--GLGPGLPINV 312 RYNNS+ YAQNVL WAAGYATGV P++LPP+T P AHL E GLGPG +V Sbjct 260 RYNNSVAYAQNVLAWAAGYATGVLPLNLPPLTAADVAPERKAHLGGGESRGLGPGSVTDV 319 Query 313 NGLTADGPMAHLPLID-LTPRQAALNPPPMFPWMAPDPSAPMPGCTLICIGSHGPPVGAP 371 GL+ + P+A LP+++ LTP +A + + + P P AP C L C P Sbjct 320 AGLSPNDPLAQLPIVNPLTPDRAVI--AALPGAVPPAPEAPQAPCMLFCAPPPPPAEPFN 377 Query 372 PFPPTAPPPPFLPAAP 387 PF P P PF P AP Sbjct 378 PFAPQPPAEPFNPFAP 393 >gi|289757328|ref|ZP_06516706.1| predicted protein [Mycobacterium tuberculosis T85] gi|289712892|gb|EFD76904.1| predicted protein [Mycobacterium tuberculosis T85] Length=285 Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 159/170 (94%), Positives = 163/170 (96%), Gaps = 1/170 (0%) Query 31 VAAIAPLVFASAVGSAAPVFPGRTAPVHAVITPVAAVAASGIDLSGPVVIAMKRPPTSFR 90 +AAIAPLVFASAVG AAPVFPGRTAPVHAVITPVAAVAASGIDLSGPVVIAMKRPPTSFR Sbjct 1 MAAIAPLVFASAVGGAAPVFPGRTAPVHAVITPVAAVAASGIDLSGPVVIAMKRPPTSFR 60 Query 91 VAVATISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIES 150 VAVATISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIES Sbjct 61 VAVATISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIES 120 Query 151 MHANGGATDARGTAIQPIYGPTLDGTLPGN-EIIIQSSVGNRVTYARAMG 199 MHANGGATDARGTAIQPIYGPTLDG+LPG + +SS GNRVTYARAMG Sbjct 121 MHANGGATDARGTAIQPIYGPTLDGSLPGQADHSSKSSFGNRVTYARAMG 170 >gi|54026692|ref|YP_120934.1| hypothetical protein nfa47190 [Nocardia farcinica IFM 10152] gi|54018200|dbj|BAD59570.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=484 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 113/175 (65%), Positives = 137/175 (79%), Gaps = 4/175 (2%) Query 106 NSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAI 165 N+ G LGIP + L+AYRNAEL +A++ PGCG+SW+LLAGIGRIES HA+ G TDA GT + Sbjct 104 NTGGVLGIPEIVLAAYRNAELALASSMPGCGLSWHLLAGIGRIESAHASSGRTDAAGTTV 163 Query 166 QPIYGPTLDGTLPGNEIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQN 225 PI+GP LDGTLPGNEII + G Y RA+GPMQFLP TW+ Y+ DG+ DGVADP N Sbjct 164 SPIFGPALDGTLPGNEIIKAADGG----YVRAVGPMQFLPSTWSLYSADGNGDGVADPHN 219 Query 226 LFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFP 280 +FD++LAA +YLCSGGLNLRDP Q + A+LRYNNSM YA +VL W+A Y TG P Sbjct 220 VFDASLAAGKYLCSGGLNLRDPQQELRAVLRYNNSMAYAADVLSWSAAYRTGGTP 274 >gi|54027034|ref|YP_121276.1| hypothetical protein nfa50600 [Nocardia farcinica IFM 10152] gi|54018542|dbj|BAD59912.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=377 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 140/283 (50%), Positives = 171/283 (61%), Gaps = 21/283 (7%) Query 111 LGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYG 170 LGIP + L+AYRNAEL +A++ PGCG+SW+LLAGIGRIES HA+GG TDA GT + PI+G Sbjct 72 LGIPEIVLAAYRNAELALASSMPGCGLSWHLLAGIGRIESAHASGGRTDAAGTTVSPIFG 131 Query 171 PTLDGTLPGNEIIIQSSVGNRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDST 230 P LDGTLPGNEII + G Y RA+GPMQFLP TW+ Y+ DG+ DGVADP N+FD++ Sbjct 132 PALDGTLPGNEIIEAADGG----YVRAVGPMQFLPSTWSLYSADGNGDGVADPHNVFDAS 187 Query 231 LAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVDLPPITGPP 290 LAA +YLCSGG +LRD +Q + A+LRYNNS YA +VL W+A Y TG G P Sbjct 188 LAAGKYLCSGGTDLRDRSQELRAVLRYNNSASYAADVLSWSAAYRTG----------GAP 237 Query 291 PPLGDAHLENPEGLGPGLPINVNG--LTADGPMAHLPLIDLTPRQAALNPPPMFPWMAPD 348 P+ A P G PG P V+G + A P PL L P P P + Sbjct 238 APVTVAPDRVPPGSAPGAPRAVDGPAILAQSPTGDRPLT-LEPMAPTEVPRREQPTLITL 296 Query 349 PSAPMPGCTLICIGSHGP----PVGAPPFPPTAPPPPFLPAAP 387 P C L+C G P P P P P + PAAP Sbjct 297 PGIGAVSCGLLCAGPGEPLVPDPEPEPSVPADLPEQTYGPAAP 339 >gi|325676415|ref|ZP_08156093.1| hypothetical protein HMPREF0724_13876 [Rhodococcus equi ATCC 33707] gi|325552593|gb|EGD22277.1| hypothetical protein HMPREF0724_13876 [Rhodococcus equi ATCC 33707] Length=366 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 109/172 (64%), Positives = 130/172 (76%), Gaps = 3/172 (1%) Query 109 GALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPI 168 G LGIP + L+AYR+AEL MA A PGCG+ WNLLAGIG+IES HA GG TDA GT + PI Sbjct 108 GPLGIPEIVLNAYRSAELAMAGAQPGCGLQWNLLAGIGKIESGHAGGGQTDAAGTTVTPI 167 Query 169 YGPTLDGTLPGNEIIIQSSVGNRV---TYARAMGPMQFLPGTWARYATDGDDDGVADPQN 225 GPTL+G L GNEII + G + RA+GPMQF+P TW RYA+DG+ DGVADP N Sbjct 168 LGPTLNGHLAGNEIITDTDRGALDGDPVHDRAVGPMQFIPSTWVRYASDGNGDGVADPNN 227 Query 226 LFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATG 277 +FD+TL+AARYLC+GGLNL DP+Q+ A+LRYNNS Y NVL W+A Y TG Sbjct 228 VFDATLSAARYLCAGGLNLNDPSQLTRAVLRYNNSSTYMANVLSWSAAYRTG 279 >gi|312138880|ref|YP_004006216.1| hypothetical protein REQ_14510 [Rhodococcus equi 103S] gi|311888219|emb|CBH47531.1| putative secreted protein [Rhodococcus equi 103S] Length=370 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 109/172 (64%), Positives = 130/172 (76%), Gaps = 3/172 (1%) Query 109 GALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPI 168 G LGIP + L+AYR+AEL MA A PGCG+ WNLLAGIG+IES HA GG TDA GT + PI Sbjct 112 GPLGIPEIVLNAYRSAELAMAGAQPGCGLQWNLLAGIGKIESGHAGGGQTDAAGTTVTPI 171 Query 169 YGPTLDGTLPGNEIIIQSSVGNRV---TYARAMGPMQFLPGTWARYATDGDDDGVADPQN 225 GPTL+G L GNEII + G + RA+GPMQF+P TW RYA+DG+ DGVADP N Sbjct 172 LGPTLNGHLAGNEIITDTDRGALDGDPVHDRAVGPMQFIPSTWVRYASDGNGDGVADPNN 231 Query 226 LFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATG 277 +FD+TL+AARYLC+GGLNL DP+Q+ A+LRYNNS Y NVL W+A Y TG Sbjct 232 VFDATLSAARYLCAGGLNLNDPSQLTRAVLRYNNSSTYMANVLSWSAAYRTG 283 >gi|226365452|ref|YP_002783235.1| hypothetical protein ROP_60430 [Rhodococcus opacus B4] gi|226243942|dbj|BAH54290.1| hypothetical protein [Rhodococcus opacus B4] Length=386 Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 108/175 (62%), Positives = 129/175 (74%), Gaps = 3/175 (1%) Query 110 ALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIY 169 ALGIP + L+AYR+AEL+M A +P CG+ W+LLAGIGRIES HA GG TD+ GT I PI Sbjct 111 ALGIPEIVLNAYRSAELEMMAESPKCGLPWHLLAGIGRIESGHAGGGRTDSVGTTITPIL 170 Query 170 GPTLDGTLPGNEIIIQSSVGNRVT---YARAMGPMQFLPGTWARYATDGDDDGVADPQNL 226 GP LDG L GNEII + G + RA+GPMQF+P TWA+YA+DG+ DGVADP N+ Sbjct 171 GPVLDGRLAGNEIIRDTDRGATDGDPGHDRAVGPMQFIPSTWAKYASDGNADGVADPNNV 230 Query 227 FDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPV 281 FD+TLAAARYLCSGGL+LRDP Q A+LRYNNS YA NV+ W+ Y G P Sbjct 231 FDATLAAARYLCSGGLDLRDPLQETRAVLRYNNSAAYAANVITWSNAYRNGGTPT 285 >gi|111022946|ref|YP_705918.1| hypothetical protein RHA1_ro05983 [Rhodococcus jostii RHA1] gi|110822476|gb|ABG97760.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=387 Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 107/175 (62%), Positives = 129/175 (74%), Gaps = 3/175 (1%) Query 110 ALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIY 169 ALGIP + L+AYR+AEL+M A +P CG+ W+LLAGIGRIES HA GG TD+ GT I PI Sbjct 116 ALGIPEIVLNAYRSAELEMMAESPKCGLPWHLLAGIGRIESGHAGGGRTDSVGTTITPIL 175 Query 170 GPTLDGTLPGNEIIIQSSVGNRVT---YARAMGPMQFLPGTWARYATDGDDDGVADPQNL 226 GP LDG L GNE+I + G + RA+GPMQF+P TWA+YA+DG+ DGVADP N+ Sbjct 176 GPVLDGRLAGNEVIRDTDRGATDGDPGHDRAVGPMQFIPSTWAKYASDGNADGVADPNNV 235 Query 227 FDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPV 281 FD+TLAAARYLCSGGL+LRDP Q A+LRYNNS YA NV+ W+ Y G P Sbjct 236 FDATLAAARYLCSGGLDLRDPLQETRAVLRYNNSAAYAANVITWSNAYRNGGTPT 290 >gi|226307639|ref|YP_002767599.1| hypothetical protein RER_41520 [Rhodococcus erythropolis PR4] gi|226186756|dbj|BAH34860.1| hypothetical protein RER_41520 [Rhodococcus erythropolis PR4] Length=486 Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 108/183 (60%), Positives = 131/183 (72%), Gaps = 4/183 (2%) Query 110 ALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIY 169 +LGIP + L+AYR+AEL M APGCG+ W+LLAGIGRIES HANGG T + GT + PI Sbjct 103 SLGIPEIVLNAYRSAELVMMTEAPGCGIPWHLLAGIGRIESGHANGGKTTSVGTTVTPIL 162 Query 170 GPTLDGTLPGNEIIIQSSVG---NRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNL 226 GP LDG L GNE+I + G T+ RA+GPMQF+P TWA YA+DG+ DG+ DP N+ Sbjct 163 GPVLDGRLAGNEVIRDTDKGAIDGDPTHDRAVGPMQFIPATWAGYASDGNGDGIKDPNNV 222 Query 227 FDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPV-DLPP 285 FD+ L+AA+YLCSGGLNLRD AQ A+LRYNNS YA NV+ W+ Y GV P LP Sbjct 223 FDAALSAAKYLCSGGLNLRDVAQETKAVLRYNNSAAYAANVIMWSTAYKNGVIPSGQLPY 282 Query 286 ITG 288 TG Sbjct 283 TTG 285 >gi|229493752|ref|ZP_04387534.1| secreted protein [Rhodococcus erythropolis SK121] gi|229319352|gb|EEN85191.1| secreted protein [Rhodococcus erythropolis SK121] Length=417 Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 107/183 (59%), Positives = 130/183 (72%), Gaps = 4/183 (2%) Query 110 ALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIY 169 +LGIP + L+AYR+AEL M APGCG+ W+LLAGIGRIES HANGG T + GT + PI Sbjct 85 SLGIPEIVLNAYRSAELVMMTEAPGCGIPWHLLAGIGRIESGHANGGKTTSVGTTVTPIL 144 Query 170 GPTLDGTLPGNEIIIQSSVG---NRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNL 226 GP LDG L GNE+I + G T+ RA+GPMQF+P TW YA+DG+ DG+ DP N+ Sbjct 145 GPVLDGRLAGNEVIRDTDKGAIDGDPTHDRAVGPMQFIPATWTGYASDGNGDGIKDPNNV 204 Query 227 FDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPV-DLPP 285 FD+ L+AA+YLCSGGLNLRD AQ A+LRYNNS YA NV+ W+ Y GV P LP Sbjct 205 FDAALSAAKYLCSGGLNLRDVAQETKAVLRYNNSAAYAANVIMWSTAYKNGVIPSGQLPY 264 Query 286 ITG 288 TG Sbjct 265 TTG 267 >gi|111022945|ref|YP_705917.1| hypothetical protein RHA1_ro05982 [Rhodococcus jostii RHA1] gi|110822475|gb|ABG97759.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=292 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 105/196 (54%), Positives = 132/196 (68%), Gaps = 5/196 (2%) Query 96 ISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANG 155 + A PP + GALGIPA++++AY+NAE +A PGCG+ W L+AGIGR+ES HA Sbjct 96 VQATPPLPASIAQGALGIPAISVAAYQNAERMLAVEQPGCGMYWTLIAGIGRVESTHAYD 155 Query 156 GATDARGTAIQPIYGPTLDGTLPGNEIIIQSSVGN---RVTYARAMGPMQFLPGTWARYA 212 G D +G ++P+ GP LDGTL GN +I + G Y RA+GP QFLP TW RYA Sbjct 156 GKADDKGNMLKPVLGPVLDGTLGGNAVIRDTDGGKLDGDANYDRAVGPTQFLPETWNRYA 215 Query 213 TDGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAA 272 DG+ DGVADPQNLFDS L +YLC GGLN++DP Q A+ RYNNS Y NVL W+A Sbjct 216 GDGNGDGVADPQNLFDSALTTGKYLCDGGLNVKDPIQAAKAVHRYNNSAAYVANVLAWSA 275 Query 273 GYATGVFP--VDLPPI 286 GY++G+ P DLP I Sbjct 276 GYSSGIIPAAADLPRI 291 >gi|226365451|ref|YP_002783234.1| hypothetical protein ROP_60420 [Rhodococcus opacus B4] gi|226243941|dbj|BAH54289.1| hypothetical protein [Rhodococcus opacus B4] Length=292 Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 104/193 (54%), Positives = 132/193 (69%), Gaps = 6/193 (3%) Query 99 PPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGAT 158 PP P + + GALGIPA+ ++AY+NAE +A PGCG+ W L+AGIGR+ES HA G T Sbjct 100 PPLPASI-AQGALGIPAVNVAAYQNAERILAVEQPGCGMYWTLIAGIGRVESTHAYDGKT 158 Query 159 DARGTAIQPIYGPTLDGTLPGNEIIIQSSVGN---RVTYARAMGPMQFLPGTWARYATDG 215 D +G ++P+ GP LDG+L GN +I + G Y RA+GP QFLP TW RYA DG Sbjct 159 DDKGNMLKPVLGPVLDGSLGGNAVIRDTDGGKLDGDSNYDRAVGPTQFLPETWNRYAGDG 218 Query 216 DDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYA 275 + DGVADPQN+FDS L +YLC GGLN++DP Q A+ RYNNS Y NVL W+AGY+ Sbjct 219 NGDGVADPQNVFDSALTTGKYLCDGGLNVKDPIQAAKAVHRYNNSAAYVANVLAWSAGYS 278 Query 276 TGVFP--VDLPPI 286 +G+ P DLP I Sbjct 279 SGIIPAAADLPRI 291 >gi|54026693|ref|YP_120935.1| hypothetical protein nfa47200 [Nocardia farcinica IFM 10152] gi|54018201|dbj|BAD59571.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=289 Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 100/175 (58%), Positives = 122/175 (70%), Gaps = 3/175 (1%) Query 109 GALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPI 168 G LG+P +A +AYRNAE K+ A P C + W +LAGIGR+ES HA GG DA G I+P+ Sbjct 107 GPLGMPGIAEAAYRNAEEKLHAENPQCHMPWTMLAGIGRVESTHAFGGKADADGNPIKPV 166 Query 169 YGPTLDGTLPGNEIIIQSSVG---NRVTYARAMGPMQFLPGTWARYATDGDDDGVADPQN 225 YGP LDG+L GN +I S G Y RA+GPMQFLP TW RYA DG+ DG+ADPQN Sbjct 167 YGPVLDGSLAGNNVIHDSDNGALDGLDGYDRAVGPMQFLPETWQRYAADGNGDGIADPQN 226 Query 226 LFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFP 280 LFD+ L A +YLC G L++RD +Q A+LRYNNSM Y NV+ W + YATGV P Sbjct 227 LFDAALTAGKYLCDGNLDMRDLSQQSRAILRYNNSMAYVANVMAWESAYATGVAP 281 >gi|226307640|ref|YP_002767600.1| hypothetical protein RER_41530 [Rhodococcus erythropolis PR4] gi|229493845|ref|ZP_04387618.1| secreted protein [Rhodococcus erythropolis SK121] gi|226186757|dbj|BAH34861.1| hypothetical protein RER_41530 [Rhodococcus erythropolis PR4] gi|229319232|gb|EEN85080.1| secreted protein [Rhodococcus erythropolis SK121] Length=287 Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 100/197 (51%), Positives = 131/197 (67%), Gaps = 6/197 (3%) Query 96 ISAPPPPMIVNSPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANG 155 + A PP + GALGIP+++++AY+NAE +A P C + W LLAGIGR+ES HAN Sbjct 90 VQATPPLPASMAEGALGIPSVSVAAYQNAERILAVEKPNCNMHWTLLAGIGRVESGHAND 149 Query 156 GAT-DARGTAIQPIYGPTLDGTLPGNEIIIQSSVG---NRVTYARAMGPMQFLPGTWARY 211 G DA G +P+ G L+G+LPG +I+ + G Y RA+GPMQF+P TW +Y Sbjct 150 GKDADANGNLYKPVIGLPLNGSLPGQAVIMDTDGGALDGDTVYDRAVGPMQFIPSTWNQY 209 Query 212 ATDGDDDGVADPQNLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWA 271 A DG+ DG+ADPQNLFDS L +YLC GGLN++D QV +A+ RYNNS Y NVL W+ Sbjct 210 AGDGNGDGIADPQNLFDSALTTGKYLCDGGLNMQDVTQVASAIHRYNNSAAYVANVLAWS 269 Query 272 AGYATGVFPV--DLPPI 286 GY+TG+ P DLP I Sbjct 270 LGYSTGIVPAASDLPRI 286 >gi|333920999|ref|YP_004494580.1| hypothetical protein AS9A_3338 [Amycolicicoccus subflavus DQS3-9A1] gi|333483220|gb|AEF41780.1| hypothetical protein AS9A_3338 [Amycolicicoccus subflavus DQS3-9A1] Length=405 Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 120/295 (41%), Positives = 153/295 (52%), Gaps = 28/295 (9%) Query 17 RRGACRLTRAPAFGVAAIAPL-VFASAVGSAAPVFPGRTAPVHAVITPVAAVAASGIDLS 75 RR R R+ +A + P +F A S VH V AA AA Sbjct 6 RRDTSRNRRSSVLAMAGLLPAGLFGVAAASDLESSDSAAQAVHEVEISHAAAAAYNDSTV 65 Query 76 GPVVIAMKRPPTSFR----VAVATISAPPPPMIVN---------------SPGALGIPAM 116 G +V + R PT R VA I+ ++ + GA IPA+ Sbjct 66 G-MVTPVLRNPTVLRSQQTVAADAIAQQAGEELLEGLNLAVGEALNNVTVNLGAFAIPAV 124 Query 117 ALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPTLDGT 176 L AY+ A +M A P CG+SW LLAGIG +ES HA+GGA D G ++PI GP LDGT Sbjct 125 MLEAYKKAAAQMEALRPSCGISWTLLAGIGHVESGHASGGAVDVNGRTLRPILGPRLDGT 184 Query 177 LPGNEIIIQSSVGNRV----TYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDSTLA 232 P N +I+ + G + + RA+GPMQF+P TW YATDG+ DG ADP N++D+T+A Sbjct 185 TP-NTAVIRDTDGGELDGDSQFDRAVGPMQFIPSTWRMYATDGNGDGQADPHNVYDATVA 243 Query 233 AARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVF--PVDLPP 285 AA+YLC G +L A+LRYN S Y NV WA YATGV P DLPP Sbjct 244 AAKYLCDAGGDLTVAGNQERAILRYNASRSYLNNVRNWATAYATGVLPTPTDLPP 298 >gi|262201803|ref|YP_003273011.1| membrane-bound lytic murein transglycosylase B- like protein [Gordonia bronchialis DSM 43247] gi|262085150|gb|ACY21118.1| Membrane-bound lytic murein transglycosylase B- like protein [Gordonia bronchialis DSM 43247] Length=377 Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 92/178 (52%), Positives = 121/178 (68%), Gaps = 5/178 (2%) Query 109 GALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPI 168 G LGIP + L AY+ A ++ A +P C + W LLAGIGRIES HA+ G+ D GT I PI Sbjct 105 GPLGIPGIVLQAYKLAANRIGAESPQCKLPWFLLAGIGRIESNHASNGSVDQYGTTINPI 164 Query 169 YGPTLDGTLPGNEIIIQSSVGNRVT----YARAMGPMQFLPGTWARYATDGDDDGVADPQ 224 GP LDG+L GN +I + + G R+ + RAMGPMQF+P TWA + +DG+ DG ADP Sbjct 165 AGPVLDGSLAGNAVI-RDTDGGRIDGDSGHDRAMGPMQFIPSTWAAWGSDGNGDGKADPN 223 Query 225 NLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVD 282 N+FD+T +A RYLC+G ++ + +AA+LRYN+SM Y NVL WA YATGV P + Sbjct 224 NVFDATYSAGRYLCAGVTDIMNDRNKVAAVLRYNHSMEYVANVLSWAGAYATGVMPTN 281 >gi|257057189|ref|YP_003135021.1| hypothetical protein Svir_32220 [Saccharomonospora viridis DSM 43017] gi|256587061|gb|ACU98194.1| hypothetical protein Svir_32220 [Saccharomonospora viridis DSM 43017] Length=453 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 98/174 (57%), Positives = 117/174 (68%), Gaps = 6/174 (3%) Query 109 GALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPI 168 G+LGIP+ AL AY+ A + AA PGC + W LLA IGRIES HA GG D G A + I Sbjct 58 GSLGIPSTALEAYKRAAERAAAEYPGCNIDWALLASIGRIESNHARGGYVDGNGDARETI 117 Query 169 YGPTLDGTLPGNEIIIQSSVGN----RVTYARAMGPMQFLPGTWARYATDGDDDGVADPQ 224 GP LDGT G+ I + G + RA+GPMQF+P TW RYA+DG+ DGVADP Sbjct 118 LGPVLDGT--GDVAAIPDTDGGAYDGDTRWDRAVGPMQFIPSTWKRYASDGNGDGVADPN 175 Query 225 NLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGV 278 NL+DSTLAAARYLCSGG++L DP Q+ AAL RYNNS Y V+ WA Y +GV Sbjct 176 NLYDSTLAAARYLCSGGVDLSDPEQLRAALYRYNNSWSYVNTVIRWAKAYRSGV 229 >gi|343928015|ref|ZP_08767480.1| hypothetical protein GOALK_100_00190 [Gordonia alkanivorans NBRC 16433] gi|343762023|dbj|GAA14406.1| hypothetical protein GOALK_100_00190 [Gordonia alkanivorans NBRC 16433] Length=374 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 90/178 (51%), Positives = 118/178 (67%), Gaps = 5/178 (2%) Query 109 GALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPI 168 G LGIP + L AY+ A ++ A +P C + W LLAGIGRIES HA+ G+ D GT + I Sbjct 102 GPLGIPGVVLQAYKLAANRVGAESPQCKLPWFLLAGIGRIESNHASNGSVDQYGTTVNTI 161 Query 169 YGPTLDGTLPGNEIIIQSSVGNRVT----YARAMGPMQFLPGTWARYATDGDDDGVADPQ 224 GP LDG+L GN +I + + G R+ + RAMGPMQF+P TWA + +D + DG ADP Sbjct 162 AGPVLDGSLAGNAVI-KDTDGGRIDGDSAHDRAMGPMQFIPSTWASWGSDANGDGKADPN 220 Query 225 NLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPVD 282 N+FD+T +A RYLC+G ++ +AA+LRYN SM Y NVLGWA YATGV P + Sbjct 221 NVFDATYSAGRYLCAGVSDIMGEGTRVAAVLRYNRSMEYVANVLGWAGAYATGVMPTN 278 >gi|262200848|ref|YP_003272056.1| membrane-bound lytic murein transglycosylase B- like protein [Gordonia bronchialis DSM 43247] gi|262084195|gb|ACY20163.1| Membrane-bound lytic murein transglycosylase B- like protein [Gordonia bronchialis DSM 43247] Length=275 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 84/165 (51%), Positives = 108/165 (66%), Gaps = 3/165 (1%) Query 113 IPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPT 172 +P AY NA M+ P CG+ W L+AGIG++ES HA+ G D+ GT PI+GP Sbjct 111 VPVSNYDAYVNAADIMSRTNPRCGIDWRLIAGIGKVESHHADEGNVDSHGTLRDPIFGPV 170 Query 173 LDGTLPGNEIIIQSSVGN---RVTYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFDS 229 L+G+L GN++I + G +Y RA+GPMQFLP TW YA D + DG ADPQN+FD+ Sbjct 171 LNGSLAGNQVITDTDHGRLDGDASYDRAVGPMQFLPETWNHYAADANGDGKADPQNIFDA 230 Query 230 TLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGY 274 L ARYLC G L+LR+ A + A+LRYNNSM Y NVLG+A Y Sbjct 231 ALTTARYLCDGNLDLRNDASRVTAILRYNNSMTYVDNVLGFARSY 275 >gi|326383773|ref|ZP_08205458.1| Membrane-bound lytic murein transglycosylase B- like protein [Gordonia neofelifaecis NRRL B-59395] gi|326197537|gb|EGD54726.1| Membrane-bound lytic murein transglycosylase B- like protein [Gordonia neofelifaecis NRRL B-59395] Length=247 Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 88/166 (54%), Positives = 105/166 (64%), Gaps = 5/166 (3%) Query 113 IPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPIYGPT 172 +P + AY+ A MA APGC + W L+ GIGR+ES HAN G DA G PIYGP Sbjct 83 VPEINFKAYKAAADSMAKTAPGCHIDWKLIGGIGRVESQHANFGDADANGQLRHPIYGPV 142 Query 173 LDGTLPGNEIIIQSSVGNRV----TYARAMGPMQFLPGTWARYATDGDDDGVADPQNLFD 228 LDG+L GNE+I + G R+ Y RA+GP QFLP TW YA DG+ DG ADPQNL+D Sbjct 143 LDGSLGGNEVITDTD-GGRLDGDPVYDRAVGPTQFLPATWQHYAADGNGDGKADPQNLYD 201 Query 229 STLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGY 274 + L ARYLC L+L A A+LRYNNSM Y NVLG+A Y Sbjct 202 AALTTARYLCDDNLDLATDAGRSQAVLRYNNSMDYVSNVLGFARSY 247 >gi|326382041|ref|ZP_08203734.1| Membrane-bound lytic murein transglycosylase B- like protein [Gordonia neofelifaecis NRRL B-59395] gi|326199467|gb|EGD56648.1| Membrane-bound lytic murein transglycosylase B- like protein [Gordonia neofelifaecis NRRL B-59395] Length=374 Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 93/177 (53%), Positives = 115/177 (65%), Gaps = 5/177 (2%) Query 109 GALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQPI 168 G LGIP + L AY+ A ++AA +P C + W LLAGIGRIES HA G DA G I Sbjct 109 GPLGIPGVVLKAYKLAATRVAAESPQCKLPWYLLAGIGRIESGHAGNGNVDAYGNTRTKI 168 Query 169 YGPTLDGTLPGNEIIIQSSVGNRVT----YARAMGPMQFLPGTWARYATDGDDDGVADPQ 224 GP LDG+L GN +I S G R+ + RAMGPMQF+P TWA + DG+ DG ADP Sbjct 169 RGPVLDGSLAGNAVI-HDSDGGRLDGDAGHDRAMGPMQFIPSTWAAWGGDGNGDGKADPD 227 Query 225 NLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGVFPV 281 N+FD+T +A RYLC+G ++ + A+LRYN+SMPY NVLGWAA YA GV P Sbjct 228 NVFDATYSAGRYLCAGFTDIMAGQNKVNAVLRYNHSMPYVNNVLGWAAAYAAGVMPT 284 >gi|302529269|ref|ZP_07281611.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302438164|gb|EFL09980.1| conserved hypothetical protein [Streptomyces sp. AA4] Length=426 Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 95/177 (54%), Positives = 112/177 (64%), Gaps = 8/177 (4%) Query 107 SPGALGIPAMALSAYRNAELKMAAAAPGCGVSWNLLAGIGRIESMHANGGATDARGTAIQ 166 PG LGIPA L AYRNA MA PGC + W LLA IGRIES HA GG DA+G ++ Sbjct 84 EPGPLGIPASMLKAYRNAADLMAKERPGCRLDWTLLASIGRIESSHARGGYVDAKGNTVE 143 Query 167 PIYGPTLDGTLPGNEIIIQSS-----VGNRVTYARAMGPMQFLPGTWARYATDGDDDGVA 221 I GP LDGT G I +S G+RV + A+GPMQF+ GTW +YA+DG+ DGV+ Sbjct 144 RILGPALDGT--GGFAAIPASDGGAFTGDRV-WDHAVGPMQFITGTWRQYASDGNGDGVS 200 Query 222 DPQNLFDSTLAAARYLCSGGLNLRDPAQVMAALLRYNNSMPYAQNVLGWAAGYATGV 278 DP N++D TLAA RYLCSG L+L A+ RYNNS Y VL WAA Y GV Sbjct 201 DPNNVYDETLAAGRYLCSGNLDLSSDEGQRTAVRRYNNSDSYVDTVLTWAARYRGGV 257 Lambda K H 0.318 0.138 0.443 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 822404616408 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40