BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1243c
Length=562
Score E
Sequences producing significant alignments: (Bits) Value
gi|31792436|ref|NP_854929.1| PE-PGRS family protein [Mycobacteri... 934 0.0
gi|15840688|ref|NP_335725.1| PE_PGRS family protein [Mycobacteri... 933 0.0
gi|339297868|gb|AEJ49978.1| hypothetical protein CCDC5180_1141 [... 931 0.0
gi|340626256|ref|YP_004744708.1| PE-PGRS family protein [Mycobac... 930 0.0
gi|339294228|gb|AEJ46339.1| hypothetical protein CCDC5079_1149 [... 916 0.0
gi|289446834|ref|ZP_06436578.1| PE-PGRS family protein [Mycobact... 296 7e-78
gi|254364143|ref|ZP_04980189.1| PE-PGRS family protein [Mycobact... 280 3e-73
gi|323720200|gb|EGB29299.1| hypothetical protein TMMG_01938 [Myc... 280 5e-73
gi|148822460|ref|YP_001287214.1| PE-PGRS family protein [Mycobac... 280 7e-73
gi|297633792|ref|ZP_06951572.1| PE-PGRS family protein [Mycobact... 278 2e-72
gi|297730778|ref|ZP_06959896.1| PE-PGRS family protein [Mycobact... 278 2e-72
gi|289744988|ref|ZP_06504366.1| PE-PGRS family protein [Mycobact... 277 3e-72
gi|294994801|ref|ZP_06800492.1| PE-PGRS family protein [Mycobact... 275 2e-71
gi|289757341|ref|ZP_06516719.1| predicted protein [Mycobacterium... 268 1e-69
gi|289569248|ref|ZP_06449475.1| predicted protein [Mycobacterium... 267 4e-69
gi|31792060|ref|NP_854553.1| PE-PGRS family protein [Mycobacteri... 160 6e-37
gi|339297525|gb|AEJ49635.1| PE-PGRS family protein [Mycobacteriu... 160 6e-37
gi|57117029|ref|YP_177909.1| PE-PGRS family protein [Mycobacteri... 159 1e-36
gi|339632862|ref|YP_004724504.1| PE-PGRS family protein [Mycobac... 159 1e-36
gi|297635466|ref|ZP_06953246.1| PE-PGRS family protein [Mycobact... 159 1e-36
gi|31794030|ref|NP_856523.1| PE-PGRS family protein [Mycobacteri... 159 1e-36
gi|148824043|ref|YP_001288797.1| PE-PGRS family protein [Mycobac... 159 2e-36
gi|340627846|ref|YP_004746298.1| PE-PGRS family protein [Mycobac... 158 2e-36
gi|15842394|ref|NP_337431.1| PE_PGRS family protein [Mycobacteri... 158 3e-36
gi|148662694|ref|YP_001284217.1| PE-PGRS family protein [Mycobac... 157 4e-36
gi|183984120|ref|YP_001852411.1| PE-PGRS family protein [Mycobac... 157 5e-36
gi|121638733|ref|YP_978957.1| PE-PGRS family protein [Mycobacter... 152 2e-34
gi|183985289|ref|YP_001853580.1| PE-PGRS family protein [Mycobac... 150 5e-34
gi|183984540|ref|YP_001852831.1| PE-PGRS family protein [Mycobac... 149 1e-33
gi|118618628|ref|YP_906960.1| PE-PGRS family protein [Mycobacter... 147 3e-33
gi|294994057|ref|ZP_06799748.1| PE_PGRS family protein [Mycobact... 146 9e-33
gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobac... 145 2e-32
gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobac... 143 8e-32
gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacteri... 143 9e-32
gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacteriu... 143 9e-32
gi|57116996|ref|YP_177887.1| PE-PGRS family protein [Mycobacteri... 143 9e-32
gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted p... 142 1e-31
gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024... 142 2e-31
gi|183985307|ref|YP_001853598.1| PE-PGRS family protein [Mycobac... 141 3e-31
gi|183985103|ref|YP_001853394.1| PE-PGRS family protein, PE_PGRS... 139 1e-30
gi|339298994|gb|AEJ51104.1| PE-PGRS family protein [Mycobacteriu... 137 4e-30
gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobac... 137 5e-30
gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobac... 137 5e-30
gi|183981183|ref|YP_001849474.1| PE-PGRS family protein [Mycobac... 136 9e-30
gi|294994403|ref|ZP_06800094.1| PE-PGRS family protein [Mycobact... 135 2e-29
gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobac... 135 3e-29
gi|183982505|ref|YP_001850796.1| PE-PGRS family protein, PE_PGRS... 125 1e-26
gi|183982495|ref|YP_001850786.1| PE-PGRS family protein [Mycobac... 125 2e-26
gi|340626105|ref|YP_004744557.1| PE-PGRS family protein [Mycobac... 125 2e-26
gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobac... 124 3e-26
>gi|31792436|ref|NP_854929.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|57116845|ref|YP_177798.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|121637172|ref|YP_977395.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
15 more sequence titles
Length=562
Score = 934 bits (2413), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/562 (100%), Positives = 562/562 (100%), Gaps = 0/562 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ
Sbjct 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD
Sbjct 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
Query 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG
Sbjct 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
Query 181 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV
Sbjct 181 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
Query 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 300
SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG
Sbjct 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 300
Query 301 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN 360
DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN
Sbjct 301 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN 360
Query 361 SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPPGGNSTGGNGGAGGDGGVGASADVGGAG 420
SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPPGGNSTGGNGGAGGDGGVGASADVGGAG
Sbjct 361 SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPPGGNSTGGNGGAGGDGGVGASADVGGAG 420
Query 421 GFGGSGGRGGLLLGTGGAGGDGGVGGDGGIGAQGGSGGNGGNGGIGADGMANQDGDGGDG 480
GFGGSGGRGGLLLGTGGAGGDGGVGGDGGIGAQGGSGGNGGNGGIGADGMANQDGDGGDG
Sbjct 421 GFGGSGGRGGLLLGTGGAGGDGGVGGDGGIGAQGGSGGNGGNGGIGADGMANQDGDGGDG 480
Query 481 GNGGDGGAGGAGGVGGNGGTGGAGGLFGQSGSPGSGAAGGLGGAGGNGGAGGGGGTGFNP 540
GNGGDGGAGGAGGVGGNGGTGGAGGLFGQSGSPGSGAAGGLGGAGGNGGAGGGGGTGFNP
Sbjct 481 GNGGDGGAGGAGGVGGNGGTGGAGGLFGQSGSPGSGAAGGLGGAGGNGGAGGGGGTGFNP 540
Query 541 GAPGDPGTQGATGANGQHGLNG 562
GAPGDPGTQGATGANGQHGLNG
Sbjct 541 GAPGDPGTQGATGANGQHGLNG 562
>gi|15840688|ref|NP_335725.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|253799712|ref|YP_003032713.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|289554968|ref|ZP_06444178.1| predicted protein [Mycobacterium tuberculosis KZN 605]
gi|13880875|gb|AAK45539.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|253321215|gb|ACT25818.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|289439600|gb|EFD22093.1| predicted protein [Mycobacterium tuberculosis KZN 605]
gi|328459458|gb|AEB04881.1| hypothetical protein TBSG_02752 [Mycobacterium tuberculosis KZN
4207]
Length=586
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/562 (100%), Positives = 562/562 (100%), Gaps = 0/562 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ
Sbjct 25 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 84
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD
Sbjct 85 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 144
Query 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG
Sbjct 145 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 204
Query 181 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV
Sbjct 205 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 264
Query 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 300
SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG
Sbjct 265 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 324
Query 301 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN 360
DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN
Sbjct 325 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN 384
Query 361 SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPPGGNSTGGNGGAGGDGGVGASADVGGAG 420
SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPPGGNSTGGNGGAGGDGGVGASADVGGAG
Sbjct 385 SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPPGGNSTGGNGGAGGDGGVGASADVGGAG 444
Query 421 GFGGSGGRGGLLLGTGGAGGDGGVGGDGGIGAQGGSGGNGGNGGIGADGMANQDGDGGDG 480
GFGGSGGRGGLLLGTGGAGGDGGVGGDGGIGAQGGSGGNGGNGGIGADGMANQDGDGGDG
Sbjct 445 GFGGSGGRGGLLLGTGGAGGDGGVGGDGGIGAQGGSGGNGGNGGIGADGMANQDGDGGDG 504
Query 481 GNGGDGGAGGAGGVGGNGGTGGAGGLFGQSGSPGSGAAGGLGGAGGNGGAGGGGGTGFNP 540
GNGGDGGAGGAGGVGGNGGTGGAGGLFGQSGSPGSGAAGGLGGAGGNGGAGGGGGTGFNP
Sbjct 505 GNGGDGGAGGAGGVGGNGGTGGAGGLFGQSGSPGSGAAGGLGGAGGNGGAGGGGGTGFNP 564
Query 541 GAPGDPGTQGATGANGQHGLNG 562
GAPGDPGTQGATGANGQHGLNG
Sbjct 565 GAPGDPGTQGATGANGQHGLNG 586
>gi|339297868|gb|AEJ49978.1| hypothetical protein CCDC5180_1141 [Mycobacterium tuberculosis
CCDC5180]
Length=562
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/562 (99%), Positives = 561/562 (99%), Gaps = 0/562 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ
Sbjct 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD
Sbjct 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
Query 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG
Sbjct 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
Query 181 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV
Sbjct 181 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
Query 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 300
SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG
Sbjct 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 300
Query 301 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN 360
DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN
Sbjct 301 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN 360
Query 361 SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPPGGNSTGGNGGAGGDGGVGASADVGGAG 420
SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPPGGNSTGGNGGAGGDGGVGASADVGGAG
Sbjct 361 SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPPGGNSTGGNGGAGGDGGVGASADVGGAG 420
Query 421 GFGGSGGRGGLLLGTGGAGGDGGVGGDGGIGAQGGSGGNGGNGGIGADGMANQDGDGGDG 480
GFGGSGGRGGLLLGTGGAGGDGGVGGDGGIGAQGGSGGNGGNGGIGADGMANQ GDGGDG
Sbjct 421 GFGGSGGRGGLLLGTGGAGGDGGVGGDGGIGAQGGSGGNGGNGGIGADGMANQHGDGGDG 480
Query 481 GNGGDGGAGGAGGVGGNGGTGGAGGLFGQSGSPGSGAAGGLGGAGGNGGAGGGGGTGFNP 540
GNGGDGGAGGAGGVGGNGGTGGAGGLFGQSGSPGSGAAGGLGGAGGNGGAGGGGGTGFNP
Sbjct 481 GNGGDGGAGGAGGVGGNGGTGGAGGLFGQSGSPGSGAAGGLGGAGGNGGAGGGGGTGFNP 540
Query 541 GAPGDPGTQGATGANGQHGLNG 562
GAPGDPGTQGATGANGQHGLNG
Sbjct 541 GAPGDPGTQGATGANGQHGLNG 562
>gi|340626256|ref|YP_004744708.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004446|emb|CCC43589.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=562
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/562 (99%), Positives = 561/562 (99%), Gaps = 0/562 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ
Sbjct 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD
Sbjct 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
Query 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG
Sbjct 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
Query 181 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
GNGGWLYGNGGLGGNGGAAT +GGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV
Sbjct 181 GNGGWLYGNGGLGGNGGAATLVGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
Query 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 300
SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG
Sbjct 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 300
Query 301 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN 360
DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN
Sbjct 301 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN 360
Query 361 SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPPGGNSTGGNGGAGGDGGVGASADVGGAG 420
SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPPGGNSTGGNGGAGGDGGVGASADVGGAG
Sbjct 361 SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPPGGNSTGGNGGAGGDGGVGASADVGGAG 420
Query 421 GFGGSGGRGGLLLGTGGAGGDGGVGGDGGIGAQGGSGGNGGNGGIGADGMANQDGDGGDG 480
GFGGSGGRGGLLLGTGGAGGDGGVGGDGGIGAQGGSGGNGGNGGIGADGMANQDGDGGDG
Sbjct 421 GFGGSGGRGGLLLGTGGAGGDGGVGGDGGIGAQGGSGGNGGNGGIGADGMANQDGDGGDG 480
Query 481 GNGGDGGAGGAGGVGGNGGTGGAGGLFGQSGSPGSGAAGGLGGAGGNGGAGGGGGTGFNP 540
GNGGDGGAGGAGGVGGNGGTGGAGGLFGQSGSPGSGAAGGLGGAGGNGGAGGGGGTGFNP
Sbjct 481 GNGGDGGAGGAGGVGGNGGTGGAGGLFGQSGSPGSGAAGGLGGAGGNGGAGGGGGTGFNP 540
Query 541 GAPGDPGTQGATGANGQHGLNG 562
GAPGDPGTQGATGANGQHGLNG
Sbjct 541 GAPGDPGTQGATGANGQHGLNG 562
>gi|339294228|gb|AEJ46339.1| hypothetical protein CCDC5079_1149 [Mycobacterium tuberculosis
CCDC5079]
Length=562
Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/562 (99%), Positives = 556/562 (99%), Gaps = 0/562 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ
Sbjct 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD
Sbjct 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
Query 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG
Sbjct 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
Query 181 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV
Sbjct 181 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
Query 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 300
SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG
Sbjct 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 300
Query 301 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN 360
DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN
Sbjct 301 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN 360
Query 361 SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPPGGNSTGGNGGAGGDGGVGASADVGGAG 420
SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPPGGNSTGGNGGAGGDGGVGASADVGGAG
Sbjct 361 SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPPGGNSTGGNGGAGGDGGVGASADVGGAG 420
Query 421 GFGGSGGRGGLLLGTGGAGGDGGVGGDGGIGAQGGSGGNGGNGGIGADGMANQDGDGGDG 480
GFGGSGGRGGLLLGTGGAGGDGGVGG GGIG QGGSGGNGGNGGIGADGM GDGGDG
Sbjct 421 GFGGSGGRGGLLLGTGGAGGDGGVGGGGGIGGQGGSGGNGGNGGIGADGMTGLGGDGGDG 480
Query 481 GNGGDGGAGGAGGVGGNGGTGGAGGLFGQSGSPGSGAAGGLGGAGGNGGAGGGGGTGFNP 540
GNGGDGGAGGAGGVGGNGGTGGAGGLFGQSGSPGSGAAGGLGGAGGNGGAGGGGGTGFNP
Sbjct 481 GNGGDGGAGGAGGVGGNGGTGGAGGLFGQSGSPGSGAAGGLGGAGGNGGAGGGGGTGFNP 540
Query 541 GAPGDPGTQGATGANGQHGLNG 562
GAPGDPGTQGATGANGQHGLNG
Sbjct 541 GAPGDPGTQGATGANGQHGLNG 562
>gi|289446834|ref|ZP_06436578.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
gi|289419792|gb|EFD16993.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
Length=416
Score = 296 bits (758), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 369/378 (98%), Positives = 370/378 (98%), Gaps = 1/378 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ
Sbjct 25 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 84
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD
Sbjct 85 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 144
Query 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG
Sbjct 145 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 204
Query 181 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV
Sbjct 205 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 264
Query 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 300
SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG
Sbjct 265 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 324
Query 301 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN 360
DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN
Sbjct 325 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN 384
Query 361 SIGG-NGGAGGNGGIGAP 377
SIGG GG G + AP
Sbjct 385 SIGGATGGRPGETAVSAP 402
>gi|254364143|ref|ZP_04980189.1| PE-PGRS family protein [Mycobacterium tuberculosis str. Haarlem]
gi|134149657|gb|EBA41702.1| PE-PGRS family protein [Mycobacterium tuberculosis str. Haarlem]
Length=597
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 354/356 (99%), Positives = 355/356 (99%), Gaps = 0/356 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ
Sbjct 25 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 84
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD
Sbjct 85 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 144
Query 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
GANGGPGQNGGDGGLLYGNGGNGGSSSTP QPGGRGGAAGLIGNGG+GGAGGPGANGGAG
Sbjct 145 GANGGPGQNGGDGGLLYGNGGNGGSSSTPAQPGGRGGAAGLIGNGGSGGAGGPGANGGAG 204
Query 181 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV
Sbjct 205 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 264
Query 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 300
SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG
Sbjct 265 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 324
Query 301 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVA 356
DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVA
Sbjct 325 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVA 380
>gi|323720200|gb|EGB29299.1| hypothetical protein TMMG_01938 [Mycobacterium tuberculosis CDC1551A]
Length=430
Score = 280 bits (716), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 395/396 (99%), Positives = 395/396 (99%), Gaps = 0/396 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ
Sbjct 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD
Sbjct 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
Query 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG
Sbjct 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
Query 181 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV
Sbjct 181 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
Query 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 300
SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG
Sbjct 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 300
Query 301 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN 360
DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN
Sbjct 301 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN 360
Query 361 SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPPGGN 396
SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPPGG
Sbjct 361 SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPPGGQ 396
>gi|148822460|ref|YP_001287214.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148720987|gb|ABR05612.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
Length=414
Score = 280 bits (715), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ
Sbjct 25 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 84
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD
Sbjct 85 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 144
Query 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG
Sbjct 145 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 204
Query 181 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV
Sbjct 205 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 264
Query 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 300
SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG
Sbjct 265 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 324
Query 301 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVA 356
DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVA
Sbjct 325 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVA 380
>gi|297633792|ref|ZP_06951572.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
gi|313658109|ref|ZP_07814989.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN V2475]
Length=442
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 393/393 (100%), Positives = 393/393 (100%), Gaps = 0/393 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ
Sbjct 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD
Sbjct 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
Query 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG
Sbjct 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
Query 181 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV
Sbjct 181 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
Query 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 300
SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG
Sbjct 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 300
Query 301 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN 360
DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN
Sbjct 301 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN 360
Query 361 SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPP 393
SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPP
Sbjct 361 SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPP 393
>gi|297730778|ref|ZP_06959896.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506]
Length=441
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 393/393 (100%), Positives = 393/393 (100%), Gaps = 0/393 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ
Sbjct 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD
Sbjct 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
Query 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG
Sbjct 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
Query 181 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV
Sbjct 181 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
Query 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 300
SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG
Sbjct 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 300
Query 301 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN 360
DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN
Sbjct 301 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN 360
Query 361 SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPP 393
SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPP
Sbjct 361 SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPP 393
>gi|289744988|ref|ZP_06504366.1| PE-PGRS family protein [Mycobacterium tuberculosis 02_1987]
gi|289685516|gb|EFD53004.1| PE-PGRS family protein [Mycobacterium tuberculosis 02_1987]
Length=551
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 393/393 (100%), Positives = 393/393 (100%), Gaps = 0/393 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ
Sbjct 25 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 84
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD
Sbjct 85 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 144
Query 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG
Sbjct 145 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 204
Query 181 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV
Sbjct 205 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 264
Query 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 300
SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG
Sbjct 265 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 324
Query 301 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN 360
DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN
Sbjct 325 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN 384
Query 361 SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPP 393
SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPP
Sbjct 385 SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPP 417
>gi|294994801|ref|ZP_06800492.1| PE-PGRS family protein [Mycobacterium tuberculosis 210]
Length=527
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 393/393 (100%), Positives = 393/393 (100%), Gaps = 0/393 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ
Sbjct 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD
Sbjct 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
Query 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG
Sbjct 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
Query 181 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV
Sbjct 181 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
Query 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 300
SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG
Sbjct 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 300
Query 301 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN 360
DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN
Sbjct 301 DGGDGANFASGGAGGNGGAAQSGFGDAVGGNGGAGGNGGAGGGGGLGGAGGSANVANAGN 360
Query 361 SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPP 393
SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPP
Sbjct 361 SIGGNGGAGGNGGIGAPGGAGGAGGNANQDNPP 393
>gi|289757341|ref|ZP_06516719.1| predicted protein [Mycobacterium tuberculosis T85]
gi|289712905|gb|EFD76917.1| predicted protein [Mycobacterium tuberculosis T85]
Length=362
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 308/308 (100%), Positives = 308/308 (100%), Gaps = 0/308 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ
Sbjct 25 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 84
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD
Sbjct 85 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 144
Query 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG
Sbjct 145 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 204
Query 181 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV
Sbjct 205 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 264
Query 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 300
SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG
Sbjct 265 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVSGGAGG 324
Query 301 DGGDGANF 308
DGGDGANF
Sbjct 325 DGGDGANF 332
>gi|289569248|ref|ZP_06449475.1| predicted protein [Mycobacterium tuberculosis T17]
gi|289543002|gb|EFD46650.1| predicted protein [Mycobacterium tuberculosis T17]
Length=437
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 295/295 (100%), Positives = 295/295 (100%), Gaps = 0/295 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ
Sbjct 99 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 158
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD
Sbjct 159 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 218
Query 121 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 180
GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG
Sbjct 219 GANGGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGAG 278
Query 181 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 240
GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV
Sbjct 279 GNGGWLYGNGGLGGNGGAATQIGGNGGNGGHGGNAGLWGNGGAGGAGAAGAAGANGQNPV 338
Query 241 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVS 295
SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVS
Sbjct 339 SHQVTHATDGADGTTGPDGNGTDAGSGSNAVNPGVGGGAGGIGGDGTNLGQTDVS 393
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/25 (100%), Positives = 25/25 (100%), Gaps = 0/25 (0%)
Query 538 FNPGAPGDPGTQGATGANGQHGLNG 562
FNPGAPGDPGTQGATGANGQHGLNG
Sbjct 413 FNPGAPGDPGTQGATGANGQHGLNG 437
>gi|31792060|ref|NP_854553.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31617647|emb|CAD93757.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=608
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/126 (68%), Positives = 106/126 (85%), Gaps = 0/126 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M Y++A +++ AAA +L IGS L+AAN AA APTTG+LAAGADEVSAA+ASLFSG+AQ
Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
AYQ L QAAAFH++F++ALS+AAG+Y +AEAANASP+Q L+V+N PTQ LLGRPLIG+
Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120
Query 121 GANGGP 126
G NG P
Sbjct 121 GTNGAP 126
>gi|339297525|gb|AEJ49635.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180]
Length=650
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/126 (68%), Positives = 106/126 (85%), Gaps = 0/126 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M Y++A +++ AAA +L IGS L+AAN AA APTTG+LAAGADEVSAA+ASLFSG+AQ
Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
AYQ L QAAAFH++F++ALS+AAG+Y +AEAANASP+Q L+V+N PTQ LLGRPLIG+
Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120
Query 121 GANGGP 126
G NG P
Sbjct 121 GTNGAP 126
>gi|57117029|ref|YP_177909.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|7476147|pir||H70589 hypothetical glycine-rich protein Rv2853 - Mycobacterium tuberculosis
(strain H37RV)
gi|41352758|emb|CAE55525.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|344220685|gb|AEN01316.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=615
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/129 (60%), Positives = 100/129 (78%), Gaps = 1/129 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M Y++A+ D++ AAA +L IGSA++ AN AA PT ++AA ADEVS IA+LF +A+
Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
+YQ LS QAAAFH +FV+AL++AA SYA+ EAANASP+Q LDV+N P Q LLGRPLIG+
Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120
Query 121 GANGG-PGQ 128
GA+G PGQ
Sbjct 121 GADGSTPGQ 129
>gi|339632862|ref|YP_004724504.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339332218|emb|CCC27928.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=615
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/129 (60%), Positives = 100/129 (78%), Gaps = 1/129 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M Y++A+ D++ AAA +L IGSA++ AN AA PT ++AA ADEVS IA+LF +A+
Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
+YQ LS QAAAFH +FV+AL++AA SYA+ EAANASP+Q LDV+N P Q LLGRPLIG+
Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120
Query 121 GANGG-PGQ 128
GA+G PGQ
Sbjct 121 GADGSTPGQ 129
>gi|297635466|ref|ZP_06953246.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
gi|297732465|ref|ZP_06961583.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506]
Length=615
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/129 (60%), Positives = 100/129 (78%), Gaps = 1/129 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M Y++A+ D++ AAA +L IGSA++ AN AA PT ++AA ADEVS IA+LF +A+
Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
+YQ LS QAAAFH +FV+AL++AA SYA+ EAANASP+Q LDV+N P Q LLGRPLIG+
Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120
Query 121 GANGG-PGQ 128
GA+G PGQ
Sbjct 121 GADGSTPGQ 129
>gi|31794030|ref|NP_856523.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31619624|emb|CAD95063.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=615
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/129 (60%), Positives = 100/129 (78%), Gaps = 1/129 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M Y++A+ D++ AAA +L IGSA++ AN AA PT ++AA ADEVS IA+LF +A+
Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
+YQ LS QAAAFH +FV+AL++AA SYA+ EAANASP+Q LDV+N P Q LLGRPLIG+
Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120
Query 121 GANGG-PGQ 128
GA+G PGQ
Sbjct 121 GADGSTPGQ 129
>gi|148824043|ref|YP_001288797.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|253798061|ref|YP_003031062.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|254232947|ref|ZP_04926274.1| PE-PGRS family protein [Mycobacterium tuberculosis C]
6 more sequence titles
Length=663
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/129 (60%), Positives = 100/129 (78%), Gaps = 1/129 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M Y++A+ D++ AAA +L IGSA++ AN AA PT ++AA ADEVS IA+LF +A+
Sbjct 49 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 108
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
+YQ LS QAAAFH +FV+AL++AA SYA+ EAANASP+Q LDV+N P Q LLGRPLIG+
Sbjct 109 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 168
Query 121 GANGG-PGQ 128
GA+G PGQ
Sbjct 169 GADGSTPGQ 177
>gi|340627846|ref|YP_004746298.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340006036|emb|CCC45206.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=615
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/129 (60%), Positives = 100/129 (78%), Gaps = 1/129 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M Y++A+ D++ AAA +L IGSA++ AN AA PT ++AA ADEVS IA+LF +A+
Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
+YQ LS QAAAFH +FV+AL++AA SYA+ EAANASP+Q LDV+N P Q LLGRPLIG+
Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120
Query 121 GANGG-PGQ 128
GA+G PGQ
Sbjct 121 GADGSTPGQ 129
>gi|15842394|ref|NP_337431.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13882694|gb|AAK47245.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=663
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/129 (60%), Positives = 100/129 (78%), Gaps = 1/129 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M Y++A+ D++ AAA +L IGSA++ AN AA PT ++AA ADEVS IA+LF +A+
Sbjct 49 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 108
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
+YQ LS QAAAFH +FV+AL++AA SYA+ EAANASP+Q LDV+N P Q LLGRPLIG+
Sbjct 109 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 168
Query 121 GANGG-PGQ 128
GA+G PGQ
Sbjct 169 GADGSTPGQ 177
>gi|148662694|ref|YP_001284217.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148506846|gb|ABQ74655.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=614
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/127 (60%), Positives = 99/127 (78%), Gaps = 1/127 (0%)
Query 3 YLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQAY 62
Y++A+ D++ AAA +L IGSA++ AN AA PT ++AA ADEVS IA+LF +A++Y
Sbjct 2 YVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHARSY 61
Query 63 QALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGDGA 122
Q LS QAAAFH +FV+AL++AA SYA+ EAANASP+Q LDV+N P Q LLGRPLIG+GA
Sbjct 62 QTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGNGA 121
Query 123 NGG-PGQ 128
+G PGQ
Sbjct 122 DGSTPGQ 128
>gi|183984120|ref|YP_001852411.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183177446|gb|ACC42556.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=600
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/124 (67%), Positives = 98/124 (80%), Gaps = 0/124 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M +++ + +VL A DL IGSA++ AN AA APT G LAAGADEVSAA+A++FSG+AQ
Sbjct 1 MSFVVVSPEVLAVAGRDLASIGSAISQANVAAAAPTMGALAAGADEVSAAVAAVFSGHAQ 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
AYQAL AQ AAFH Q V AL +AAG YA+AE ANASP+QAVLDVVN P Q LLGRPLIG+
Sbjct 61 AYQALGAQVAAFHDQLVTALDAAAGKYASAEVANASPLQAVLDVVNAPAQALLGRPLIGN 120
Query 121 GANG 124
G +G
Sbjct 121 GDDG 124
>gi|121638733|ref|YP_978957.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224991225|ref|YP_002645914.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121494381|emb|CAL72862.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224774340|dbj|BAH27146.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341602771|emb|CCC65449.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=597
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/188 (59%), Positives = 136/188 (73%), Gaps = 2/188 (1%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M Y++A+ D++ AAA +L IGSA++ AN AA PT ++AA ADEVS IA+LF +A+
Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
+YQ LS QAAAFH +FV+AL++AA SYA+ EAANASP+Q LDV+N P Q LLGRPLIG+
Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120
Query 121 GANGG-PGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGA 179
GA+G PGQ G G L G G++ P Q GG GG AGLIGNGGAGGAGG GA GG
Sbjct 121 GADGSTPGQ-AGGPGGLLYGNGGNGAAGGPNQAGGAGGNAGLIGNGGAGGAGGVGAVGGN 179
Query 180 GGNGGWLY 187
GG G L+
Sbjct 180 GGTGDLLF 187
>gi|183985289|ref|YP_001853580.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178615|gb|ACC43725.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=723
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/153 (64%), Positives = 116/153 (76%), Gaps = 5/153 (3%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M YL+ ++L +AA DLEGI SAL+ AN AA PTTG+LAAGADEVSAA+ASLF+G Q
Sbjct 1 MSYLLVTPELLTSAATDLEGIASALSTANLAAAVPTTGVLAAGADEVSAAVASLFAGYGQ 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQA----VLDVVNGPTQLLLGRP 116
AYQ++S QA AF QF++A++ A G+YAAAEAA+ SP+QA VL V+N PTQ LLGRP
Sbjct 61 AYQSISLQANAFQAQFIQAINGAGGAYAAAEAASTSPLQAFEDTVLGVINAPTQTLLGRP 120
Query 117 LIGDGANGGPGQ-NGGDGGLLYGNGGNGGSSST 148
LIGDGA G NGG GG LYGNGGNG S +T
Sbjct 121 LIGDGAAGTAANPNGGAGGFLYGNGGNGFSQTT 153
>gi|183984540|ref|YP_001852831.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183177866|gb|ACC42976.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=603
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/133 (59%), Positives = 103/133 (78%), Gaps = 1/133 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M Y++A ++L +AAADLEGIGSAL+ AN A T+ +LAAG DE+S A+ASLF+ +AQ
Sbjct 1 MSYVMAVPELLASAAADLEGIGSALSTANALALPSTSEILAAGTDEISTAVASLFADHAQ 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
Y+ +S +A AFHQQF R+LS AA SY+ AEAANASP+Q +L+V+N + LLGRPLIG+
Sbjct 61 DYRTISLEANAFHQQFWRSLSGAAASYSGAEAANASPLQELLNVINQQSTALLGRPLIGN 120
Query 121 GANG-GPGQNGGD 132
GA+G PGQ+G D
Sbjct 121 GADGAAPGQSGDD 133
>gi|118618628|ref|YP_906960.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
gi|118570738|gb|ABL05489.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
Length=611
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/141 (69%), Positives = 113/141 (81%), Gaps = 4/141 (2%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M Y+IAA ++L AA DL GIG+AL +AN AA AP TG+LAAGADE+SAA+A+LFSG+A
Sbjct 1 MSYVIAAPEMLAGAATDLAGIGAALQSANGAAAAPITGVLAAGADEISAAVAALFSGHAL 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAV----LDVVNGPTQLLLGRP 116
YQALS Q A FHQQFV AL+SA SYAAAEAA+A+P+QAV L V+N PTQ LLGRP
Sbjct 61 DYQALSTQMAGFHQQFVTALNSAGASYAAAEAASANPLQAVEQQLLGVINAPTQALLGRP 120
Query 117 LIGDGANGGPGQNGGDGGLLY 137
LIGDG G PGQNGGDGGLL+
Sbjct 121 LIGDGTAGAPGQNGGDGGLLW 141
>gi|294994057|ref|ZP_06799748.1| PE_PGRS family protein [Mycobacterium tuberculosis 210]
Length=604
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/117 (63%), Positives = 91/117 (78%), Gaps = 1/117 (0%)
Query 13 AAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQAYQALSAQAAAF 72
AAA +L IGSA++ AN AA PT ++AA ADEVS IA+LF +A++YQ LS QAAAF
Sbjct 2 AAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHARSYQTLSTQAAAF 61
Query 73 HQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGDGANGG-PGQ 128
H +FV+AL++AA SYA+ EAANASP+Q LDV+N P Q LLGRPLIG+GA+G PGQ
Sbjct 62 HSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGNGADGSTPGQ 118
>gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340005694|emb|CCC44860.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1660
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/124 (63%), Positives = 94/124 (76%), Gaps = 0/124 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M Y+IA +++ AA DL IGS ++AA+ A PTT ++AAGADEVSA IA+LFS +AQ
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
YQALSAQAAAFH QFV L++AA Y A E ANA+ M+AVL VN PTQ LLGRPLIGD
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRAVLGAVNAPTQTLLGRPLIGD 120
Query 121 GANG 124
GA+G
Sbjct 121 GAHG 124
>gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339331872|emb|CCC27575.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1657
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 77/124 (63%), Positives = 93/124 (75%), Gaps = 0/124 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M Y+IA +++ AA DL IGS ++AA+ A PTT ++AAGADEVSA IA+LFS +AQ
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
YQALSAQAAAFH QFV L++AA Y A E ANA+ M+ VL VN PTQ LLGRPLIGD
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
Query 121 GANG 124
GA+G
Sbjct 121 GAHG 124
>gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13882294|gb|AAK46868.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=1665
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/124 (63%), Positives = 93/124 (75%), Gaps = 0/124 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M Y+IA +++ AA DL IGS ++AA+ A PTT ++AAGADEVSA IA+LFS +AQ
Sbjct 6 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 65
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
YQALSAQAAAFH QFV L++AA Y A E ANA+ M+ VL VN PTQ LLGRPLIGD
Sbjct 66 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 125
Query 121 GANG 124
GA+G
Sbjct 126 GAHG 129
>gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1644
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/124 (63%), Positives = 93/124 (75%), Gaps = 0/124 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M Y+IA +++ AA DL IGS ++AA+ A PTT ++AAGADEVSA IA+LFS +AQ
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
YQALSAQAAAFH QFV L++AA Y A E ANA+ M+ VL VN PTQ LLGRPLIGD
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
Query 121 GANG 124
GA+G
Sbjct 121 GAHG 124
>gi|57116996|ref|YP_177887.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148662325|ref|YP_001283848.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|7441223|pir||A70869 hypothetical glycine-rich protein Rv2490c - Mycobacterium tuberculosis
(strain H37RV)
gi|41353424|emb|CAE55496.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|148506477|gb|ABQ74286.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=1660
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/124 (63%), Positives = 93/124 (75%), Gaps = 0/124 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M Y+IA +++ AA DL IGS ++AA+ A PTT ++AAGADEVSA IA+LFS +AQ
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
YQALSAQAAAFH QFV L++AA Y A E ANA+ M+ VL VN PTQ LLGRPLIGD
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
Query 121 GANG 124
GA+G
Sbjct 121 GAHG 124
>gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
gi|289438352|gb|EFD20845.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
Length=1323
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/124 (63%), Positives = 93/124 (75%), Gaps = 0/124 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M Y+IA +++ AA DL IGS ++AA+ A PTT ++AAGADEVSA IA+LFS +AQ
Sbjct 6 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 65
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
YQALSAQAAAFH QFV L++AA Y A E ANA+ M+ VL VN PTQ LLGRPLIGD
Sbjct 66 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 125
Query 121 GANG 124
GA+G
Sbjct 126 GAHG 129
>gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024 [Mycobacterium tuberculosis KZN
1435]
gi|253319935|gb|ACT24538.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|328458200|gb|AEB03623.1| hypothetical protein TBSG_01494 [Mycobacterium tuberculosis KZN
4207]
Length=1616
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/124 (63%), Positives = 93/124 (75%), Gaps = 0/124 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M Y+IA +++ AA DL IGS ++AA+ A PTT ++AAGADEVSA IA+LFS +AQ
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
YQALSAQAAAFH QFV L++AA Y A E ANA+ M+ VL VN PTQ LLGRPLIGD
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
Query 121 GANG 124
GA+G
Sbjct 121 GAHG 124
>gi|183985307|ref|YP_001853598.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178633|gb|ACC43743.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=600
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/127 (60%), Positives = 96/127 (76%), Gaps = 4/127 (3%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M YLIA+ + L ++A DL +GS +A AN AA APTTG+LAA DEVS IA+LF +A
Sbjct 1 MSYLIASPEHLASSARDLVRLGSVVADANAAAAAPTTGVLAAAVDEVSIQIAALFGAHAH 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQA----VLDVVNGPTQLLLGRP 116
+YQ LSAQAA FH+QFV+ L++A+ +YA+AEA NASP+Q VL V+N PT+ LLGRP
Sbjct 61 SYQQLSAQAATFHEQFVQTLATASRAYASAEAVNASPLQTLEQQVLSVINAPTEALLGRP 120
Query 117 LIGDGAN 123
LIGDGAN
Sbjct 121 LIGDGAN 127
>gi|183985103|ref|YP_001853394.1| PE-PGRS family protein, PE_PGRS15 [Mycobacterium marinum M]
gi|183178429|gb|ACC43539.1| PE-PGRS family protein, PE_PGRS15 [Mycobacterium marinum M]
Length=681
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/142 (60%), Positives = 103/142 (73%), Gaps = 6/142 (4%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M Y++AA D+L + A +L I +AL AN AA PTT L AAGADEVSAA+A+LFS +A+
Sbjct 1 MSYVVAASDLLASTATELARIDAALNTANAAAVLPTTVLQAAGADEVSAAVAALFSSHAR 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQA----VLDVVNGPTQLLLGRP 116
AYQALS QA FHQ F + LS A SYA+AEAAN SP+Q VL +VN PTQ LLGRP
Sbjct 61 AYQALSVQAGQFHQWFTQTLSGAGLSYASAEAANVSPLQVLERDVLGLVNAPTQALLGRP 120
Query 117 LIGDGANGGPGQ--NGGDGGLL 136
+IG+GA+G PG NG DGG+L
Sbjct 121 IIGNGADGAPGSGANGADGGIL 142
>gi|339298994|gb|AEJ51104.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180]
Length=1657
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/121 (62%), Positives = 91/121 (76%), Gaps = 0/121 (0%)
Query 4 LIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQAYQ 63
+IA +++ AA DL IGS ++AA+ A PTT ++AAGADEVSA IA+LFS +AQ YQ
Sbjct 1 MIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQEYQ 60
Query 64 ALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGDGAN 123
ALSAQAAAFH QFV L++AA Y A E ANA+ M+ VL VN PTQ LLGRPLIGDGA+
Sbjct 61 ALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGDGAH 120
Query 124 G 124
G
Sbjct 121 G 121
>gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174556|gb|ACC39666.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=963
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/123 (61%), Positives = 94/123 (77%), Gaps = 0/123 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M +++ A +++ AAA+DL IGSA+ AN A APT LLAAG DEVS AIASLFSG+A
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
YQ+L A+ AFH QFV AL++ G Y++AEAA A+P+Q +L+VVN PTQ LLGRPLIGD
Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD 120
Query 121 GAN 123
GA+
Sbjct 121 GAD 123
>gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174555|gb|ACC39665.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=946
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/123 (61%), Positives = 94/123 (77%), Gaps = 0/123 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M +++ A +++ AAA+DL IGSA+ AN A APT LLAAG DEVS AIASLFSG+A
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
YQ+L A+ AFH QFV AL++ G Y++AEAA A+P+Q +L+VVN PTQ LLGRPLIGD
Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD 120
Query 121 GAN 123
GA+
Sbjct 121 GAD 123
>gi|183981183|ref|YP_001849474.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174509|gb|ACC39619.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=594
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/142 (58%), Positives = 101/142 (72%), Gaps = 5/142 (3%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M Y++AA D + AA+ + IG AL+AAN A APTTG+LAA ADE+S A+AS+FS +A
Sbjct 1 MSYVLAAPDAMATAASSVTNIGGALSAANAMATAPTTGVLAAAADEISVAMASVFSDHAL 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPM----QAVLDVVNGPTQLLLGRP 116
+YQ ++A+ AAFH QFV AL S AG+Y AE ANASP+ Q +L +N PTQ LLGRP
Sbjct 61 SYQQVAARMAAFHDQFVAALHSGAGAYLTAETANASPLGTLEQRLLQAINAPTQTLLGRP 120
Query 117 LIGDGANG-GPGQNGGDGGLLY 137
LIGDGA G NGG GGLLY
Sbjct 121 LIGDGAAGTATNPNGGAGGLLY 142
>gi|294994403|ref|ZP_06800094.1| PE-PGRS family protein [Mycobacterium tuberculosis 210]
Length=710
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/121 (62%), Positives = 91/121 (76%), Gaps = 0/121 (0%)
Query 4 LIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQAYQ 63
+IA +++ AA DL IGS ++AA+ A PTT ++AAGADEVSA IA+LFS +AQ YQ
Sbjct 1 MIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQEYQ 60
Query 64 ALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGDGAN 123
ALSAQAAAFH QFV L++AA Y A E ANA+ M+ VL VN PTQ LLGRPLIGDGA+
Sbjct 61 ALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGDGAH 120
Query 124 G 124
G
Sbjct 121 G 121
>gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183176632|gb|ACC41742.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=965
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/123 (61%), Positives = 93/123 (76%), Gaps = 0/123 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M +++ A +++ AAA+DL IGSA+ AN A APT LLAAG DEVS AIASLFSG+A
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
YQ L A+ AFH QFV AL++ G Y++AEAA A+P+Q +L+VVN PTQ LLGRPLIGD
Sbjct 61 DYQNLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD 120
Query 121 GAN 123
GA+
Sbjct 121 GAD 123
>gi|183982505|ref|YP_001850796.1| PE-PGRS family protein, PE_PGRS15_1 [Mycobacterium marinum M]
gi|183175831|gb|ACC40941.1| PE-PGRS family protein, PE_PGRS15_1 [Mycobacterium marinum M]
Length=620
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/133 (58%), Positives = 100/133 (76%), Gaps = 1/133 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M ++I A +++ AAA DL GIGS ++AAN AA A TT + AA ADEVS A+A+LF +AQ
Sbjct 1 MSFVITAPELISAAATDLAGIGSTISAANAAASASTTAVAAAAADEVSTAVATLFGAHAQ 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
YQ+L +Q AAFH FVR L+S + YA AEA NASP+Q +LD++N PTQ +LGRPLIG+
Sbjct 61 QYQSLGSQMAAFHDDFVRILASGSNLYATAEATNASPLQPLLDLINAPTQAILGRPLIGN 120
Query 121 GANGG-PGQNGGD 132
G+NG PGQ+G D
Sbjct 121 GSNGTYPGQDGRD 133
>gi|183982495|ref|YP_001850786.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183175821|gb|ACC40931.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=681
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/188 (58%), Positives = 129/188 (69%), Gaps = 1/188 (0%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M +LIAA ++L AAAAD+ IGS ++AA+ A APTT +LAA ADEVS AIA LFS +A+
Sbjct 1 MSFLIAAPEMLTAAAADIATIGSTISAADAIAAAPTTSVLAAAADEVSLAIAGLFSAHAK 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
YQA S QAA FH+Q VR+L++ SYA AEAANASP++ +LD VN PTQ L GR LIG+
Sbjct 61 QYQAFSVQAATFHEQLVRSLAAGGFSYATAEAANASPLEFLLDAVNAPTQTLFGRDLIGN 120
Query 121 GAN-GGPGQNGGDGGLLYGNGGNGGSSSTPGQPGGRGGAAGLIGNGGAGGAGGPGANGGA 179
G + G G L G G S GQ GG GGAAGLIG GG GGAGG GA GG
Sbjct 121 GTDGAAGTGANGGDGGLLWGNGGNGGSGATGQVGGSGGAAGLIGTGGTGGAGGTGAAGGN 180
Query 180 GGNGGWLY 187
GG GGWL+
Sbjct 181 GGAGGWLF 188
>gi|340626105|ref|YP_004744557.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004295|emb|CCC43436.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=856
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/127 (69%), Positives = 102/127 (81%), Gaps = 4/127 (3%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M ++IAA + LVA A+DL GIGSALA AN A APTTGLLAAGADEVS+AIA+LF + Q
Sbjct 1 MSFVIAAPEALVAVASDLAGIGSALAEANAAVLAPTTGLLAAGADEVSSAIAALFGAHGQ 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAV----LDVVNGPTQLLLGRP 116
AYQ +SAQA+AFH QFV+AL+ G+YAAAEAAN S Q+V LD++NGPTQ LLGRP
Sbjct 61 AYQTVSAQASAFHAQFVQALTGGGGAYAAAEAANVSAAQSVDQRLLDLINGPTQALLGRP 120
Query 117 LIGDGAN 123
LIGDGAN
Sbjct 121 LIGDGAN 127
>gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183175440|gb|ACC40550.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1397
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/123 (60%), Positives = 92/123 (75%), Gaps = 2/123 (1%)
Query 1 MEYLIAAQDVLVAAAADLEGIGSALAAANRAAEAPTTGLLAAGADEVSAAIASLFSGNAQ 60
M ++ +++VAAA+DL GI SA+A AN A A TT +L A ADEVSAAIA+LF +AQ
Sbjct 1 MSFVSVTPEMVVAAASDLSGINSAIAQANSVAAAATTTVLPAAADEVSAAIAALFGTHAQ 60
Query 61 AYQALSAQAAAFHQQFVRALSSAAGSYAAAEAANASPMQAVLDVVNGPTQLLLGRPLIGD 120
YQA+SA+ AAFH +FV++L++ AGSY AEAANA Q +L +VN PTQ L GRPLIGD
Sbjct 61 QYQAISAELAAFHDRFVQSLNTGAGSYLRAEAANAE--QGLLGLVNAPTQALFGRPLIGD 118
Query 121 GAN 123
GAN
Sbjct 119 GAN 121
Lambda K H
0.306 0.138 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1255828141926
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40