BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1244 Length=286 Score E Sequences producing significant alignments: (Bits) Value gi|15608384|ref|NP_215760.1| lipoprotein LpqZ [Mycobacterium tub... 563 2e-158 gi|308375411|ref|ZP_07443799.2| lipoprotein lpqZ [Mycobacterium ... 562 2e-158 gi|298524746|ref|ZP_07012155.1| lipoprotein lpqZ [Mycobacterium ... 562 3e-158 gi|289442679|ref|ZP_06432423.1| lipoprotein lpqZ [Mycobacterium ... 561 3e-158 gi|31792437|ref|NP_854930.1| putative lipoprotein LPQZ [Mycobact... 561 4e-158 gi|340626257|ref|YP_004744709.1| putative lipoprotein LPQZ [Myco... 495 4e-138 gi|289757342|ref|ZP_06516720.1| lipoprotein lpqZ [Mycobacterium ... 489 2e-136 gi|289569249|ref|ZP_06449476.1| lipoprotein lpqZ [Mycobacterium ... 479 2e-133 gi|15827537|ref|NP_301800.1| lipoprotein [Mycobacterium leprae T... 407 1e-111 gi|118467000|ref|YP_880626.1| LpqZ protein [Mycobacterium avium ... 399 4e-109 gi|296170144|ref|ZP_06851742.1| LpqZ protein [Mycobacterium para... 397 9e-109 gi|254774261|ref|ZP_05215777.1| LpqZ [Mycobacterium avium subsp.... 396 2e-108 gi|41408637|ref|NP_961473.1| LpqZ [Mycobacterium avium subsp. pa... 395 4e-108 gi|342862122|ref|ZP_08718765.1| LpqZ [Mycobacterium colombiense ... 381 7e-104 gi|240172275|ref|ZP_04750934.1| lipoprotein [Mycobacterium kansa... 372 3e-101 gi|254823056|ref|ZP_05228057.1| LpqZ [Mycobacterium intracellula... 367 8e-100 gi|183984168|ref|YP_001852459.1| lipoprotein LpqZ [Mycobacterium... 361 8e-98 gi|118619607|ref|YP_907939.1| lipoprotein LpqZ [Mycobacterium ul... 360 1e-97 gi|12597936|gb|AAA62881.2| u1756x [Mycobacterium leprae] 316 2e-84 gi|315443270|ref|YP_004076149.1| periplasmic glycine betaine/cho... 290 2e-76 gi|108800940|ref|YP_641137.1| glycine betaine ABC transporter su... 287 2e-75 gi|120405432|ref|YP_955261.1| glycine betaine ABC transporter su... 286 3e-75 gi|333989854|ref|YP_004522468.1| hypothetical protein JDM601_121... 284 9e-75 gi|145222803|ref|YP_001133481.1| glycine betaine ABC transporter... 275 5e-72 gi|118473183|ref|YP_889304.1| ABC transporter substrate-binding ... 274 1e-71 gi|289749786|ref|ZP_06509164.1| lipoprotein lpqZ [Mycobacterium ... 175 7e-42 gi|169628476|ref|YP_001702125.1| lipoprotein LpqZ [Mycobacterium... 171 2e-40 gi|111022968|ref|YP_705940.1| amino acid ABC transporter substra... 126 4e-27 gi|226365474|ref|YP_002783257.1| ABC transporter substrate-bindi... 123 3e-26 gi|54026681|ref|YP_120923.1| putative transporter substrate-bind... 98.6 1e-18 gi|325676399|ref|ZP_08156077.1| amino acid ABC superfamily ATP b... 98.2 1e-18 gi|258651637|ref|YP_003200793.1| glycine betaine ABC transporter... 98.2 1e-18 gi|312138894|ref|YP_004006230.1| glycine/betaine ABC transporter... 97.8 2e-18 gi|116671385|ref|YP_832318.1| substrate-binding region of ABC-ty... 95.5 8e-18 gi|319950432|ref|ZP_08024347.1| putative ABC transport system su... 93.6 3e-17 gi|270262698|ref|ZP_06190969.1| transporter [Serratia odorifera ... 90.1 3e-16 gi|311899549|dbj|BAJ31957.1| putative osmoprotectant ABC transpo... 89.7 5e-16 gi|119963096|ref|YP_948524.1| glycine betaine/choline-binding pr... 89.4 7e-16 gi|322833073|ref|YP_004213100.1| Substrate-binding region of ABC... 87.8 2e-15 gi|331698881|ref|YP_004335120.1| glycine betaine ABC transporter... 87.8 2e-15 gi|220913299|ref|YP_002488608.1| glycine betaine ABC transporter... 87.4 2e-15 gi|226307615|ref|YP_002767575.1| ABC transporter substrate-bindi... 87.4 2e-15 gi|317123456|ref|YP_004097568.1| substrate-binding region of ABC... 87.4 2e-15 gi|333928170|ref|YP_004501749.1| ABC-type glycine betaine transp... 87.0 3e-15 gi|229493759|ref|ZP_04387541.1| ABC amino acid transporter, subs... 85.5 9e-15 gi|300744243|ref|ZP_07073262.1| glycine betaine/choline-binding ... 85.5 1e-14 gi|343928035|ref|ZP_08767500.1| putative ABC transporter substra... 84.7 1e-14 gi|255327621|ref|ZP_05368687.1| substrate-binding region of ABC-... 84.3 2e-14 gi|261823746|ref|YP_003261852.1| substrate-binding region of ABC... 84.0 2e-14 gi|283458826|ref|YP_003363468.1| ABC transporter periplasmic gly... 84.0 2e-14 >gi|15608384|ref|NP_215760.1| lipoprotein LpqZ [Mycobacterium tuberculosis H37Rv] gi|15840689|ref|NP_335726.1| putative lipoprotein [Mycobacterium tuberculosis CDC1551] gi|148661031|ref|YP_001282554.1| putative lipoprotein LpqZ [Mycobacterium tuberculosis H37Ra] 48 more sequence titles Length=286 Score = 563 bits (1450), Expect = 2e-158, Method: Compositional matrix adjust. Identities = 285/286 (99%), Positives = 286/286 (100%), Gaps = 0/286 (0%) Query 1 VRITRILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGF 60 +RITRILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGF Sbjct 1 MRITRILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGF 60 Query 61 AAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAG 120 AAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAG Sbjct 61 AAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAG 120 Query 121 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPR 180 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPR Sbjct 121 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPR 180 Query 181 EFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTE 240 EFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTE Sbjct 181 EFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTE 240 Query 241 RQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR 286 RQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR Sbjct 241 RQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR 286 >gi|308375411|ref|ZP_07443799.2| lipoprotein lpqZ [Mycobacterium tuberculosis SUMu007] gi|308376672|ref|ZP_07439608.2| lipoprotein lpqZ [Mycobacterium tuberculosis SUMu008] gi|308346374|gb|EFP35225.1| lipoprotein lpqZ [Mycobacterium tuberculosis SUMu007] gi|308350315|gb|EFP39166.1| lipoprotein lpqZ [Mycobacterium tuberculosis SUMu008] gi|323720201|gb|EGB29300.1| lipoprotein lpqZ [Mycobacterium tuberculosis CDC1551A] Length=311 Score = 562 bits (1449), Expect = 2e-158, Method: Compositional matrix adjust. Identities = 286/286 (100%), Positives = 286/286 (100%), Gaps = 0/286 (0%) Query 1 VRITRILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGF 60 VRITRILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGF Sbjct 26 VRITRILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGF 85 Query 61 AAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAG 120 AAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAG Sbjct 86 AAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAG 145 Query 121 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPR 180 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPR Sbjct 146 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPR 205 Query 181 EFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTE 240 EFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTE Sbjct 206 EFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTE 265 Query 241 RQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR 286 RQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR Sbjct 266 RQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR 311 >gi|298524746|ref|ZP_07012155.1| lipoprotein lpqZ [Mycobacterium tuberculosis 94_M4241A] gi|298494540|gb|EFI29834.1| lipoprotein lpqZ [Mycobacterium tuberculosis 94_M4241A] Length=286 Score = 562 bits (1448), Expect = 3e-158, Method: Compositional matrix adjust. Identities = 284/286 (99%), Positives = 286/286 (100%), Gaps = 0/286 (0%) Query 1 VRITRILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGF 60 +RITRILALLLAVLLAVSGVAGCSAD+GDRHPELVVGSTPDSEAMLLAAIYVAALRSYGF Sbjct 1 MRITRILALLLAVLLAVSGVAGCSADSGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGF 60 Query 61 AAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAG 120 AAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAG Sbjct 61 AAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAG 120 Query 121 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPR 180 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPR Sbjct 121 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPR 180 Query 181 EFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTE 240 EFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTE Sbjct 181 EFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTE 240 Query 241 RQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR 286 RQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR Sbjct 241 RQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR 286 >gi|289442679|ref|ZP_06432423.1| lipoprotein lpqZ [Mycobacterium tuberculosis T46] gi|289749787|ref|ZP_06509165.1| lipoprotein lpqZ [Mycobacterium tuberculosis T92] gi|289753315|ref|ZP_06512693.1| lipoprotein lpqZ [Mycobacterium tuberculosis EAS054] gi|289415598|gb|EFD12838.1| lipoprotein lpqZ [Mycobacterium tuberculosis T46] gi|289690374|gb|EFD57803.1| lipoprotein lpqZ [Mycobacterium tuberculosis T92] gi|289693902|gb|EFD61331.1| lipoprotein lpqZ [Mycobacterium tuberculosis EAS054] Length=286 Score = 561 bits (1447), Expect = 3e-158, Method: Compositional matrix adjust. Identities = 284/286 (99%), Positives = 285/286 (99%), Gaps = 0/286 (0%) Query 1 VRITRILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGF 60 +RITRILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGF Sbjct 1 MRITRILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGF 60 Query 61 AAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAG 120 AAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIA G Sbjct 61 AAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIATG 120 Query 121 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPR 180 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPR Sbjct 121 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPR 180 Query 181 EFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTE 240 EFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTE Sbjct 181 EFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTE 240 Query 241 RQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR 286 RQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR Sbjct 241 RQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR 286 >gi|31792437|ref|NP_854930.1| putative lipoprotein LPQZ [Mycobacterium bovis AF2122/97] gi|121637173|ref|YP_977396.1| putative lipoprotein lpqZ [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989648|ref|YP_002644335.1| putative lipoprotein [Mycobacterium bovis BCG str. Tokyo 172] 8 more sequence titles Length=286 Score = 561 bits (1446), Expect = 4e-158, Method: Compositional matrix adjust. Identities = 284/286 (99%), Positives = 286/286 (100%), Gaps = 0/286 (0%) Query 1 VRITRILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGF 60 +RITRILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGF Sbjct 1 MRITRILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGF 60 Query 61 AAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAG 120 AAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAG Sbjct 61 AAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAG 120 Query 121 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPR 180 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPR Sbjct 121 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPR 180 Query 181 EFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTE 240 EFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTE Sbjct 181 EFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTE 240 Query 241 RQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR 286 R+LLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR Sbjct 241 RKLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR 286 >gi|340626257|ref|YP_004744709.1| putative lipoprotein LPQZ [Mycobacterium canettii CIPT 140010059] gi|340004447|emb|CCC43590.1| putative lipoprotein LPQZ [Mycobacterium canettii CIPT 140010059] Length=286 Score = 495 bits (1274), Expect = 4e-138, Method: Compositional matrix adjust. Identities = 274/286 (96%), Positives = 278/286 (98%), Gaps = 0/286 (0%) Query 1 VRITRILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGF 60 +RI R+LALLL LA SG+AGCSAD G+R PELVVGSTPDSEAMLLAAIYVAALRSYGF Sbjct 1 MRIIRLLALLLTAALAASGLAGCSADAGERRPELVVGSTPDSEAMLLAAIYVAALRSYGF 60 Query 61 AAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAG 120 AAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAG Sbjct 61 AAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAG 120 Query 121 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPR 180 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPR Sbjct 121 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPR 180 Query 181 EFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTE 240 EFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTE Sbjct 181 EFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTE 240 Query 241 RQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR 286 RQLLAVNEVAGVLDTTALI MRRQVAAGADPAAVAAGWLAEHPLGR Sbjct 241 RQLLAVNEVAGVLDTTALIEMRRQVAAGADPAAVAAGWLAEHPLGR 286 >gi|289757342|ref|ZP_06516720.1| lipoprotein lpqZ [Mycobacterium tuberculosis T85] gi|289712906|gb|EFD76918.1| lipoprotein lpqZ [Mycobacterium tuberculosis T85] Length=286 Score = 489 bits (1260), Expect = 2e-136, Method: Compositional matrix adjust. Identities = 275/286 (97%), Positives = 277/286 (97%), Gaps = 0/286 (0%) Query 1 VRITRILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGF 60 +RITRILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGF Sbjct 1 MRITRILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGF 60 Query 61 AAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAG 120 AAHAETAADPVAKLDSGAFT P +MLQ LQP SVRSDAQVYRAIVSALPEGIAAG Sbjct 61 AAHAETAADPVAKLDSGAFTSYPLSPVRMLQPLQPRWSVRSDAQVYRAIVSALPEGIAAG 120 Query 121 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPR 180 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPR Sbjct 121 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPR 180 Query 181 EFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTE 240 EFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTE Sbjct 181 EFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTE 240 Query 241 RQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR 286 RQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR Sbjct 241 RQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR 286 >gi|289569249|ref|ZP_06449476.1| lipoprotein lpqZ [Mycobacterium tuberculosis T17] gi|289543003|gb|EFD46651.1| lipoprotein lpqZ [Mycobacterium tuberculosis T17] Length=242 Score = 479 bits (1234), Expect = 2e-133, Method: Compositional matrix adjust. Identities = 241/242 (99%), Positives = 241/242 (99%), Gaps = 0/242 (0%) Query 45 MLLAAIYVAALRSYGFAAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQ 104 MLLAAIYVAALRSYGFAAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQ Sbjct 1 MLLAAIYVAALRSYGFAAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQ 60 Query 105 VYRAIVSALPEGIAAGDYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAG 164 VYRAIVSALPEGIA GDYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAG Sbjct 61 VYRAIVSALPEGIATGDYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAG 120 Query 165 AHTPAAVGPCRLPAPREFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALI 224 AHTPAAVGPCRLPAPREFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALI Sbjct 121 AHTPAAVGPCRLPAPREFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALI 180 Query 225 RAENIVPLYRRNALTERQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPL 284 RAENIVPLYRRNALTERQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPL Sbjct 181 RAENIVPLYRRNALTERQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPL 240 Query 285 GR 286 GR Sbjct 241 GR 242 >gi|15827537|ref|NP_301800.1| lipoprotein [Mycobacterium leprae TN] gi|221230014|ref|YP_002503430.1| lipoprotein [Mycobacterium leprae Br4923] gi|13093087|emb|CAC31474.1| lipoprotein [Mycobacterium leprae] gi|219933121|emb|CAR71188.1| lipoprotein [Mycobacterium leprae Br4923] Length=285 Score = 407 bits (1045), Expect = 1e-111, Method: Compositional matrix adjust. Identities = 210/287 (74%), Positives = 237/287 (83%), Gaps = 3/287 (1%) Query 1 VRITRILALLLA-VLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYG 59 +R+ R+ ALLLA V + V+G GC+ D GDRHPELVVGS PDSE+ LLAAIYVAALRSYG Sbjct 1 MRVGRLAALLLAGVGVFVAG--GCATDRGDRHPELVVGSKPDSESTLLAAIYVAALRSYG 58 Query 60 FAAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAA 119 F A ET ADP+A LDSG FTVVP FTG++LQ LQP A+V S A+VYRA+VSALPEGIAA Sbjct 59 FGARGETGADPMAMLDSGGFTVVPGFTGKVLQILQPRAAVLSAARVYRAMVSALPEGIAA 118 Query 120 GDYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAP 179 GDYTTAAEDKP LVVT TAKAW G DLS + SHC L+VG VAG HTP+AVG CRLPA Sbjct 119 GDYTTAAEDKPTLVVTPDTAKAWSGSDLSLVLSHCNELVVGIVAGTHTPSAVGSCRLPAA 178 Query 180 REFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALT 239 REF + TMFAALRAGQL A WTTTA+PD+PADLI+LTDGK LI+AEN+VPLYRRN LT Sbjct 179 REFPDYPTMFAALRAGQLTAGWTTTANPDLPADLIVLTDGKATLIQAENVVPLYRRNVLT 238 Query 240 ERQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR 286 +RQ+LA+NEVAGVLDT ALI MRRQV GAD A+A GWLAEHP+GR Sbjct 239 DRQMLAINEVAGVLDTAALIEMRRQVIRGADSQAIADGWLAEHPMGR 285 >gi|118467000|ref|YP_880626.1| LpqZ protein [Mycobacterium avium 104] gi|118168287|gb|ABK69184.1| LpqZ protein [Mycobacterium avium 104] Length=289 Score = 399 bits (1024), Expect = 4e-109, Method: Compositional matrix adjust. Identities = 207/292 (71%), Positives = 235/292 (81%), Gaps = 9/292 (3%) Query 1 VRITRILALLLAVLLAVSGVAGCSADTGDR--HPELVVGSTPDSEAMLLAAIYVAALRSY 58 +RI R++A LL LLAV+G C+ DTGDR H E+VVGS PD+ + LLA IYVAALRSY Sbjct 1 MRIGRLVAPLLTALLAVTG---CTTDTGDRRAHAEVVVGSRPDASSTLLAGIYVAALRSY 57 Query 59 GFAAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIA 118 GFAA TA DP A+LDSGAFTVVPAFTG++LQ LQP A+ SD VYRA+++ALPEGI Sbjct 58 GFAARPATAGDPTAQLDSGAFTVVPAFTGRVLQALQPGATAMSDKDVYRAMIAALPEGIV 117 Query 119 AGDYTTAAEDKPALVVTQSTAKAWGGGD----LSELPSHCRGLLVGRVAGAHTPAAVGPC 174 AGDYTTAAEDKP L+V++STA+AWGG D LS LP HC GL+VG VAG P AVG C Sbjct 118 AGDYTTAAEDKPVLLVSRSTAQAWGGSDVSADLSTLPRHCDGLVVGTVAGRPAPPAVGSC 177 Query 175 RLPAPREFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYR 234 RL APREF + ATMFAA+RAGQL A WTTTADP PADL+ L DGKPALIRAEN+VP+YR Sbjct 178 RLAAPREFPDAATMFAAVRAGQLTAGWTTTADPGTPADLVALADGKPALIRAENVVPVYR 237 Query 235 RNALTERQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR 286 RNAL+ERQLLA+NEVAGVLDT AL+ MRRQV GADP AVA GWLAEHPLGR Sbjct 238 RNALSERQLLAINEVAGVLDTAALVDMRRQVDTGADPQAVAGGWLAEHPLGR 289 >gi|296170144|ref|ZP_06851742.1| LpqZ protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895206|gb|EFG74920.1| LpqZ protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=289 Score = 397 bits (1020), Expect = 9e-109, Method: Compositional matrix adjust. Identities = 206/288 (72%), Positives = 233/288 (81%), Gaps = 6/288 (2%) Query 5 RILALLLAVLLAVSGVAGCSADTGDRHP--ELVVGSTPDSEAMLLAAIYVAALRSYGFAA 62 RI L + +L AV AGC D GD P ELVVGS D EA LLA +YVAALRSYGFAA Sbjct 2 RIGWLAVPLLAAVLVAAGCGTDAGDHRPRPELVVGSGADPEAKLLAGVYVAALRSYGFAA 61 Query 63 HAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAGDY 122 HAETA DP+A+LDSGAFTVVPA TG+ LQ+LQP A+ SDA+VYRA+V+ALPEG+AAGDY Sbjct 62 HAETADDPMARLDSGAFTVVPALTGRELQSLQPGATAMSDAEVYRAMVAALPEGVAAGDY 121 Query 123 TTAAEDKPALVVTQSTAKAWGGGD----LSELPSHCRGLLVGRVAGAHTPAAVGPCRLPA 178 TTAAEDKP L+V+ STAKAWGG D LS LP HC GL++G VAG P+AVG CRLPA Sbjct 122 TTAAEDKPVLLVSGSTAKAWGGSDVSADLSTLPKHCAGLVIGAVAGRPAPSAVGACRLPA 181 Query 179 PREFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNAL 238 REF +D TMFAA+RAGQL A W TTADP +PADL+ L DGKPALIRAEN+VPLYRRNAL Sbjct 182 AREFADDTTMFAAIRAGQLTAGWATTADPGLPADLVTLADGKPALIRAENVVPLYRRNAL 241 Query 239 TERQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR 286 ++RQLLA+NEVAGVLDT AL+ MRRQVA GADP +VA GWLAEHPLGR Sbjct 242 SDRQLLAINEVAGVLDTAALVDMRRQVAGGADPQSVADGWLAEHPLGR 289 >gi|254774261|ref|ZP_05215777.1| LpqZ [Mycobacterium avium subsp. avium ATCC 25291] Length=289 Score = 396 bits (1017), Expect = 2e-108, Method: Compositional matrix adjust. Identities = 206/292 (71%), Positives = 235/292 (81%), Gaps = 9/292 (3%) Query 1 VRITRILALLLAVLLAVSGVAGCSADTGDR--HPELVVGSTPDSEAMLLAAIYVAALRSY 58 +RI R++A LL LLAV+G C+ DTGDR H E+VVGS PD+ + LLA IYVAALRSY Sbjct 1 MRIGRLVAPLLTALLAVTG---CTTDTGDRRAHAEVVVGSRPDASSTLLAGIYVAALRSY 57 Query 59 GFAAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIA 118 GFAA TA DP A+LDSGAFTVVPAFTG++LQ LQP A+ SD VYRA+++ALPEGI Sbjct 58 GFAARPATAGDPTAQLDSGAFTVVPAFTGRVLQALQPGATAMSDKDVYRAMIAALPEGIV 117 Query 119 AGDYTTAAEDKPALVVTQSTAKAWGGGD----LSELPSHCRGLLVGRVAGAHTPAAVGPC 174 AGDYTTAAEDKP L+V+++TA+AWGG D LS LP HC GL+VG VAG P AVG C Sbjct 118 AGDYTTAAEDKPVLLVSRATAQAWGGSDVSADLSTLPRHCDGLVVGAVAGHPAPPAVGSC 177 Query 175 RLPAPREFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYR 234 RL AP EF + ATMFAA+RAGQL A WTTTADP PADL+ L+DGKPALIRAEN+VPLYR Sbjct 178 RLAAPHEFPDAATMFAAVRAGQLTAGWTTTADPGTPADLVALSDGKPALIRAENVVPLYR 237 Query 235 RNALTERQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR 286 RNAL+ERQLLA+NEVAGVLDT AL+ MRRQV GADP AVA GWLAEHPLGR Sbjct 238 RNALSERQLLAINEVAGVLDTAALVDMRRQVDTGADPQAVAGGWLAEHPLGR 289 >gi|41408637|ref|NP_961473.1| LpqZ [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396995|gb|AAS04856.1| LpqZ [Mycobacterium avium subsp. paratuberculosis K-10] gi|336458575|gb|EGO37542.1| periplasmic glycine betaine/choline-binding (lipo)protein [Mycobacterium avium subsp. paratuberculosis S397] Length=289 Score = 395 bits (1015), Expect = 4e-108, Method: Compositional matrix adjust. Identities = 205/292 (71%), Positives = 234/292 (81%), Gaps = 9/292 (3%) Query 1 VRITRILALLLAVLLAVSGVAGCSADTGDR--HPELVVGSTPDSEAMLLAAIYVAALRSY 58 +RI R++A LL LLAV+G C+ DTGDR H E+VVGS PD+ + LLA IYVAALRSY Sbjct 1 MRIGRLVAPLLTALLAVTG---CTTDTGDRRAHAEVVVGSRPDASSTLLAGIYVAALRSY 57 Query 59 GFAAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIA 118 GFAA TA DP A+LDSGAFTVVPAFTG++LQ+LQP A+ SD VYRA+++ALPEGI Sbjct 58 GFAARPATAGDPTAQLDSGAFTVVPAFTGRVLQSLQPGATAMSDKDVYRAMIAALPEGIV 117 Query 119 AGDYTTAAEDKPALVVTQSTAKAWGGGD----LSELPSHCRGLLVGRVAGAHTPAAVGPC 174 AGDYTTAAEDKP L+V+++TA+AWGG D LS LP HC GL+VG VAG P AVG C Sbjct 118 AGDYTTAAEDKPVLLVSRATAQAWGGSDVSADLSTLPRHCDGLVVGTVAGHPAPPAVGSC 177 Query 175 RLPAPREFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYR 234 RL AP EF + ATMFAA+RAGQL A WTTTADP PADL+ L DGKPALIRAEN+ PLYR Sbjct 178 RLAAPHEFPDGATMFAAVRAGQLTAGWTTTADPGTPADLVALADGKPALIRAENVAPLYR 237 Query 235 RNALTERQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR 286 RNAL+ERQLLA+NEVAGVLDT AL+ MRRQV GADP AVA GWLAEHPLGR Sbjct 238 RNALSERQLLAINEVAGVLDTAALVDMRRQVDTGADPQAVAGGWLAEHPLGR 289 >gi|342862122|ref|ZP_08718765.1| LpqZ [Mycobacterium colombiense CECT 3035] gi|342130426|gb|EGT83741.1| LpqZ [Mycobacterium colombiense CECT 3035] Length=282 Score = 381 bits (978), Expect = 7e-104, Method: Compositional matrix adjust. Identities = 194/282 (69%), Positives = 223/282 (80%), Gaps = 6/282 (2%) Query 11 LAVLLAVSGVAGCSADTGDRHP--ELVVGSTPDSEAMLLAAIYVAALRSYGFAAHAETAA 68 + +L A VAGC+ DTGDR E+VVGS PD++A LLA +YVAALRSYGF A A TAA Sbjct 1 MPLLAAALTVAGCATDTGDRRARAEVVVGSRPDADAALLAGVYVAALRSYGFGARAATAA 60 Query 69 DPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAGDYTTAAED 128 DP +LDSGAFTVVPAFTG+ LQ LQP A+ SD VYRA+++ALPEG+ AGDYTTAAED Sbjct 61 DPKPQLDSGAFTVVPAFTGRTLQALQPGATAMSDKDVYRAMIAALPEGVVAGDYTTAAED 120 Query 129 KPALVVTQSTAKAWGGGD----LSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPREFRN 184 KP L+V+Q TAKAWGG D LS LP HC GL VG VAG P+ +G C LPA REF + Sbjct 121 KPVLLVSQPTAKAWGGSDVSADLSTLPRHCDGLAVGTVAGHRHPSTIGSCHLPAAREFPD 180 Query 185 DATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTERQLL 244 ATMFAA+RAGQ+ A WTT+ DP P DL+ L DGKPAL+RAEN+VPLYRRNAL++RQLL Sbjct 181 GATMFAAIRAGQVTAGWTTSTDPGTPGDLVALADGKPALVRAENVVPLYRRNALSDRQLL 240 Query 245 AVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR 286 A+NEVAGVLDT AL+ MRRQVAAGADP AVA GWLAEHPLGR Sbjct 241 AINEVAGVLDTAALVEMRRQVAAGADPQAVAGGWLAEHPLGR 282 >gi|240172275|ref|ZP_04750934.1| lipoprotein [Mycobacterium kansasii ATCC 12478] Length=283 Score = 372 bits (956), Expect = 3e-101, Method: Compositional matrix adjust. Identities = 186/257 (73%), Positives = 211/257 (83%), Gaps = 0/257 (0%) Query 30 RHPELVVGSTPDSEAMLLAAIYVAALRSYGFAAHAETAADPVAKLDSGAFTVVPAFTGQM 89 R ELVVGS PD+E+MLLA IYVAALRSYGFAA +TAADP+ LD+GAF VVPAFTGQ+ Sbjct 27 RPAELVVGSRPDTESMLLADIYVAALRSYGFAARGDTAADPMTNLDAGAFAVVPAFTGQV 86 Query 90 LQTLQPDASVRSDAQVYRAIVSALPEGIAAGDYTTAAEDKPALVVTQSTAKAWGGGDLSE 149 LQ+LQP AS RSD VY+A+V+ALPEG+AAGDY TAAEDKPALVVT +T+ AWGG +L Sbjct 87 LQSLQPGASARSDKSVYQAMVAALPEGVAAGDYATAAEDKPALVVTPATSTAWGGSELDL 146 Query 150 LPSHCRGLLVGRVAGAHTPAAVGPCRLPAPREFRNDATMFAALRAGQLVAAWTTTADPDI 209 LP HC GL+VG + GAH PAAVG CRLP PREF + M ALRAGQL A WTTTA+P Sbjct 147 LPRHCDGLVVGMLTGAHPPAAVGSCRLPTPREFADYPAMLTALRAGQLTAGWTTTANPAN 206 Query 210 PADLIMLTDGKPALIRAENIVPLYRRNALTERQLLAVNEVAGVLDTTALIGMRRQVAAGA 269 PADL++L DGK ALI+AEN+VPLYRRN LT+RQ LA+NEVAGVLDT AL+ MRRQVA GA Sbjct 207 PADLVVLNDGKDALIQAENVVPLYRRNTLTDRQRLAINEVAGVLDTAALVEMRRQVAGGA 266 Query 270 DPAAVAAGWLAEHPLGR 286 DP AVAA WL EHPLGR Sbjct 267 DPQAVAAAWLGEHPLGR 283 >gi|254823056|ref|ZP_05228057.1| LpqZ [Mycobacterium intracellulare ATCC 13950] Length=290 Score = 367 bits (943), Expect = 8e-100, Method: Compositional matrix adjust. Identities = 186/274 (68%), Positives = 218/274 (80%), Gaps = 7/274 (2%) Query 20 VAGCSADTGDR---HPELVVGSTPDSEAMLLAAIYVAALRSYGFAAHAETAADPVAKLDS 76 V+GC+ DTG E+VVGS D+E+ LLA IYVAALRSYGF A + DP A+LDS Sbjct 17 VSGCATDTGGDPRARAEVVVGSRSDAESALLAGIYVAALRSYGFGARFQPTTDPKAELDS 76 Query 77 GAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAGDYTTAAEDKPALVVTQ 136 GA TVVPAFTG++LQ LQP A+ SD VYRA+++ALPEGIAAGDYTTAAEDKP L+V++ Sbjct 77 GAITVVPAFTGRVLQRLQPSATAMSDKDVYRAMIAALPEGIAAGDYTTAAEDKPVLLVSR 136 Query 137 STAKAWGGGD----LSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPREFRNDATMFAAL 192 +TAKAWGG D LS LP HC L++G VAG P+A+GPCRLP PREF + TMFAA+ Sbjct 137 ATAKAWGGSDVSADLSTLPRHCADLVLGTVAGHRAPSAIGPCRLPDPREFPDGTTMFAAV 196 Query 193 RAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTERQLLAVNEVAGV 252 +G+L AAWTTTADP +PADL+ L D KP LIRAEN+VPLYRRNAL+ERQ+LA+NEVAGV Sbjct 197 ASGRLTAAWTTTADPGVPADLVALADTKPTLIRAENVVPLYRRNALSERQVLAINEVAGV 256 Query 253 LDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR 286 LDT AL+ MRRQV AGADP AVA GWLAEHPLGR Sbjct 257 LDTAALVDMRRQVRAGADPQAVATGWLAEHPLGR 290 >gi|183984168|ref|YP_001852459.1| lipoprotein LpqZ [Mycobacterium marinum M] gi|183177494|gb|ACC42604.1| lipoprotein LpqZ [Mycobacterium marinum M] Length=283 Score = 361 bits (926), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 194/267 (73%), Positives = 217/267 (82%), Gaps = 4/267 (1%) Query 22 GCSADTGDRH--PELVVGSTPDSEAMLLAAIYVAALRSYGFAAHAETAADPVAKLDSGAF 79 GC GDR ELVVG+T DSE+ LLA IYVAALRSYGF A A TAADP+AKLDSG F Sbjct 19 GCGG--GDRRGAAELVVGATADSESTLLADIYVAALRSYGFPARAATAADPMAKLDSGDF 76 Query 80 TVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAGDYTTAAEDKPALVVTQSTA 139 TVVPAFTG++L+ LQP A+ SD +VYRA+VSALPEGIAAGDY TAAEDKPAL++TQ+TA Sbjct 77 TVVPAFTGEVLRALQPSATALSDKEVYRAMVSALPEGIAAGDYATAAEDKPALMITQATA 136 Query 140 KAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPREFRNDATMFAALRAGQLVA 199 WG +LS L HC GL+VG+V G TPA VGPCRLPA EF + A MFA LR G+L A Sbjct 137 DGWGSSELSVLARHCDGLVVGKVGGGATPAMVGPCRLPAAGEFPDGAAMFARLRDGRLTA 196 Query 200 AWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTERQLLAVNEVAGVLDTTALI 259 AWT+TA+P +PA L+MLTDGKPALIRAEN+VPLYRRNAL ERQLLAVNEV GVLDT AL+ Sbjct 197 AWTSTANPAVPAGLVMLTDGKPALIRAENVVPLYRRNALNERQLLAVNEVGGVLDTAALV 256 Query 260 GMRRQVAAGADPAAVAAGWLAEHPLGR 286 MRRQVA GADP AVAAGWL EHPLGR Sbjct 257 DMRRQVAGGADPQAVAAGWLGEHPLGR 283 >gi|118619607|ref|YP_907939.1| lipoprotein LpqZ [Mycobacterium ulcerans Agy99] gi|118571717|gb|ABL06468.1| lipoprotein LpqZ [Mycobacterium ulcerans Agy99] Length=283 Score = 360 bits (924), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 193/267 (73%), Positives = 218/267 (82%), Gaps = 4/267 (1%) Query 22 GCSADTGDRH--PELVVGSTPDSEAMLLAAIYVAALRSYGFAAHAETAADPVAKLDSGAF 79 GC +GDR ELVVG+T DSE+ LLA IYVAALRSYGF A A TAADP+AKLDSG F Sbjct 19 GCG--SGDRRGAAELVVGATADSESTLLADIYVAALRSYGFPARAATAADPMAKLDSGDF 76 Query 80 TVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAGDYTTAAEDKPALVVTQSTA 139 TVVPAFTG++L+ LQP A+ SD +VYRA+VSALPEGIAAGDY TAAEDKPAL++TQ+TA Sbjct 77 TVVPAFTGEVLRALQPSATALSDKEVYRAMVSALPEGIAAGDYATAAEDKPALMITQATA 136 Query 140 KAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPREFRNDATMFAALRAGQLVA 199 WG +LS L HC GL+VG+V G TPA VGPCRLPA EF + A MFA LR G+L A Sbjct 137 DGWGSSELSVLARHCDGLVVGKVGGGATPAMVGPCRLPAAGEFPDGAAMFARLRDGRLTA 196 Query 200 AWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTERQLLAVNEVAGVLDTTALI 259 AWT+TA+P +PA L+MLTDGKPALIRA+N+VPLYRRNAL ERQLLAVNEV GVLDT AL+ Sbjct 197 AWTSTANPAVPAGLVMLTDGKPALIRADNVVPLYRRNALNERQLLAVNEVGGVLDTAALV 256 Query 260 GMRRQVAAGADPAAVAAGWLAEHPLGR 286 MRRQVA GADP AVAAGWL EHPLGR Sbjct 257 DMRRQVAGGADPQAVAAGWLGEHPLGR 283 >gi|12597936|gb|AAA62881.2| u1756x [Mycobacterium leprae] Length=227 Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 166/229 (73%), Positives = 187/229 (82%), Gaps = 3/229 (1%) Query 1 VRITRILALLLA-VLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYG 59 +R+ R+ ALLLA V + V+G GC+ D GDRHPELVVGS PDSE+ LLAAIYVAALRSYG Sbjct 1 MRVGRLAALLLAGVGVFVAG--GCATDRGDRHPELVVGSKPDSESTLLAAIYVAALRSYG 58 Query 60 FAAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAA 119 F A ET ADP+A LDSG FTVVP FTG++LQ LQP A+V S A+VYRA+VSALPEGIAA Sbjct 59 FGARGETGADPMAMLDSGGFTVVPGFTGKVLQILQPRAAVLSAARVYRAMVSALPEGIAA 118 Query 120 GDYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAP 179 GDYTTAAEDKP LVVT TAKAW G DLS + SHC L+VG VAG HTP+AVG CRLPA Sbjct 119 GDYTTAAEDKPTLVVTPDTAKAWSGSDLSLVLSHCNELVVGIVAGTHTPSAVGSCRLPAA 178 Query 180 REFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAEN 228 REF + TMFAALRAGQL A WTTTA+PD+PADLI+LTDGK LI+AEN Sbjct 179 REFPDYPTMFAALRAGQLTAGWTTTANPDLPADLIVLTDGKATLIQAEN 227 >gi|315443270|ref|YP_004076149.1| periplasmic glycine betaine/choline-binding (lipo)protein of an ABC transporter (osmoprotectant binding protein) [Mycobacterium sp. Spyr1] gi|315261573|gb|ADT98314.1| periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) [Mycobacterium sp. Spyr1] Length=289 Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 156/289 (54%), Positives = 198/289 (69%), Gaps = 7/289 (2%) Query 1 VRITRILA---LLLAVLLAVSG-VAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALR 56 +R++R A L LA LA G VAGC P + VG+T + EA L+A +Y AALR Sbjct 1 MRLSRPRASYRLRLAFCLAAVGIVAGCGGTPA--LPSIPVGTTGEPEAQLVAHLYTAALR 58 Query 57 SYGFAAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEG 116 YG AH + A DP+ LDSG V P TG++L PD++ RSD QVYR ++SALPEG Sbjct 59 FYGNPAHVQVADDPLGALDSGEVRVAPGLTGELLARFAPDSAARSDVQVYRTLLSALPEG 118 Query 117 IAAGDYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRL 176 +AAGDYTT+AEDKPA+ VT+ TA W GGD++ L C + VG V PA VG C L Sbjct 119 VAAGDYTTSAEDKPAIAVTERTAGEWDGGDVAALARSCPDIAVGAVRSEPRPARVGTCTL 178 Query 177 PAPREFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRN 236 P REF +D MF ALR+G++ AAWT+TA PD+P+++++L+D K +LIRAEN+VPLYRRN Sbjct 179 PDAREFPDDDAMFGALRSGRIDAAWTSTAAPDVPSEVVVLSD-KTSLIRAENVVPLYRRN 237 Query 237 ALTERQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLG 285 L E Q+LA+NE+AGVLDT +L MRRQ+A G DP VA WL EHPLG Sbjct 238 ELNESQVLALNEIAGVLDTGSLADMRRQLAEGTDPGLVAGQWLEEHPLG 286 >gi|108800940|ref|YP_641137.1| glycine betaine ABC transporter substrate-binding protein [Mycobacterium sp. MCS] gi|119870080|ref|YP_940032.1| glycine betaine ABC transporter substrate-binding protein [Mycobacterium sp. KMS] gi|126436565|ref|YP_001072256.1| glycine betaine ABC transporter substrate-binding protein [Mycobacterium sp. JLS] gi|108771359|gb|ABG10081.1| Substrate-binding region of ABC-type glycine betaine transport system [Mycobacterium sp. MCS] gi|119696169|gb|ABL93242.1| Substrate-binding region of ABC-type glycine betaine transport system [Mycobacterium sp. KMS] gi|126236365|gb|ABN99765.1| Substrate-binding region of ABC-type glycine betaine transport system [Mycobacterium sp. JLS] Length=276 Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 153/272 (57%), Positives = 189/272 (70%), Gaps = 1/272 (0%) Query 13 VLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGFAAHAETAADPVA 72 +L+A+ VA + P L +GS D +++ A +Y AALR YG E ADP+A Sbjct 4 LLIALCAVALTACGAPQAGPSLTIGSAQDDASLVTAHLYAAALRHYGTGTRVEPTADPLA 63 Query 73 KLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAGDYTTAAEDKPAL 132 LD+G VVP TG++L QP+A+ R+D QVYR +VSALPEGIAAGDYTTAAEDKPAL Sbjct 64 ALDAGEVAVVPGLTGRLLDRFQPEATARADEQVYRDMVSALPEGIAAGDYTTAAEDKPAL 123 Query 133 VVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPREFRNDATMFAAL 192 VT+ST GG DL + +C + GRV GA TPA +G CRLPAPR+F + A + AA+ Sbjct 124 AVTESTVAELGGQDLLAVVRNCGEVRPGRVRGARTPATIGTCRLPAPRDFPDAAALVAAV 183 Query 193 RAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTERQLLAVNEVAGV 252 + GQ+ AAWTTTA P IP DL++L D +L+RAEN+VPLYRRN L E Q+LA+NEVAGV Sbjct 184 KTGQVDAAWTTTASPGIPPDLVVLADST-SLVRAENVVPLYRRNTLGESQVLALNEVAGV 242 Query 253 LDTTALIGMRRQVAAGADPAAVAAGWLAEHPL 284 LDT AL MR +V AG DPA VA WLAEHPL Sbjct 243 LDTAALADMRARVRAGDDPAVVAGEWLAEHPL 274 >gi|120405432|ref|YP_955261.1| glycine betaine ABC transporter substrate-binding protein [Mycobacterium vanbaalenii PYR-1] gi|119958250|gb|ABM15255.1| Substrate-binding region of ABC-type glycine betaine transport system [Mycobacterium vanbaalenii PYR-1] Length=273 Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 146/254 (58%), Positives = 179/254 (71%), Gaps = 1/254 (0%) Query 32 PELVVGSTPDSEAMLLAAIYVAALRSYGFAAHAETAADPVAKLDSGAFTVVPAFTGQMLQ 91 P + VG+ D E+ L+A +Y AALR YG AH + P+ LD+G VVP FTGQ+LQ Sbjct 18 PSIPVGAPADPESQLIAHLYAAALRFYGNPAHVQVTDAPLDLLDAGEIRVVPGFTGQLLQ 77 Query 92 TLQPDASVRSDAQVYRAIVSALPEGIAAGDYTTAAEDKPALVVTQSTAKAWGGGDLSELP 151 PDAS R+D QVYRA++S LPEG+AAGDYTTAAEDKPA+ VT+ TA WGG D+ + Sbjct 78 RFAPDASARADVQVYRALLSVLPEGVAAGDYTTAAEDKPAVAVTERTADEWGGRDVIAVT 137 Query 152 SHCRGLLVGRVAGAHTPAAVGPCRLPAPREFRNDATMFAALRAGQLVAAWTTTADPDIPA 211 C + VG V P +VG CRLP R F + MF ALRAGQL AWTTTA PD+P+ Sbjct 138 RRCDDVSVGAVGSTAHPLSVGTCRLPEARRFADAEAMFEALRAGQLDVAWTTTAAPDVPS 197 Query 212 DLIMLTDGKPALIRAENIVPLYRRNALTERQLLAVNEVAGVLDTTALIGMRRQVAAGADP 271 ++++L+D K ALIRAEN+VPLYRRN LTE Q+LA+NE+AGVLD +L MRRQVA G +P Sbjct 198 EVVVLSD-KTALIRAENLVPLYRRNELTESQVLALNEIAGVLDAGSLADMRRQVAEGVEP 256 Query 272 AAVAAGWLAEHPLG 285 VA WL EHPLG Sbjct 257 GLVAGQWLDEHPLG 270 >gi|333989854|ref|YP_004522468.1| hypothetical protein JDM601_1214 [Mycobacterium sp. JDM601] gi|333485822|gb|AEF35214.1| lipoprotein LpqZ [Mycobacterium sp. JDM601] Length=287 Score = 284 bits (727), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 154/254 (61%), Positives = 187/254 (74%), Gaps = 1/254 (0%) Query 34 LVVGSTPDSEAMLLAAIYVAALRSYGFAAHAETAADPVAKLDSGAFTVVPAFTGQMLQTL 93 L VG+ PD ++ +LA +Y +ALR G A E+ ADPVA LD+G T+VP FTG++L Sbjct 34 LGVGTAPDPQSEVLAQLYASALRGAGAAVRIESVADPVAALDAGQLTLVPGFTGRLLAVF 93 Query 94 QPDASVRSDAQVYRAIVSALPEGIAAGDYTTAAEDKPALVVTQSTAKAWGGGDLSELPSH 153 PD++ RSD QVY A+ ALPEG+A GDY A DKPAL VT +TA AWGG +LS L H Sbjct 94 APDSTARSDRQVYWALAGALPEGLALGDYAMTAADKPALAVTTATADAWGGTELSALVRH 153 Query 154 CRGLLVGRVAGAHTPAAVGPCRLPAPREFRNDATMFAALRAGQLVAAWTTTADPDIPAD- 212 C GL+VG VAG PAAVG C LP REF + A +FAALRA Q+ AAWT+TADP +P D Sbjct 154 CSGLVVGAVAGVRAPAAVGRCTLPRLREFPDSAALFAALRARQITAAWTSTADPSMPDDA 213 Query 213 LIMLTDGKPALIRAENIVPLYRRNALTERQLLAVNEVAGVLDTTALIGMRRQVAAGADPA 272 ++LTDG+PAL+RAEN+VPLYRRN LTE QLLA+N+VAGVLDT AL MRR+VA GADP Sbjct 214 TVLLTDGRPALVRAENVVPLYRRNELTESQLLAINQVAGVLDTEALTDMRRRVAHGADPQ 273 Query 273 AVAAGWLAEHPLGR 286 +V +L EHPLGR Sbjct 274 SVVGAFLEEHPLGR 287 >gi|145222803|ref|YP_001133481.1| glycine betaine ABC transporter substrate-binding protein [Mycobacterium gilvum PYR-GCK] gi|145215289|gb|ABP44693.1| Substrate-binding region of ABC-type glycine betaine transport system [Mycobacterium gilvum PYR-GCK] Length=241 Score = 275 bits (704), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 136/239 (57%), Positives = 172/239 (72%), Gaps = 1/239 (0%) Query 47 LAAIYVAALRSYGFAAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVY 106 +A +Y AALR YG AH + A DP+ LDSG V P TG++L PD++ RSD QVY Sbjct 1 MAHLYTAALRFYGNPAHVQVADDPLGALDSGEVRVAPGLTGELLARFAPDSAARSDVQVY 60 Query 107 RAIVSALPEGIAAGDYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAH 166 R ++SALPEG+AAGDYTT+AEDKPA+ VT+ TA W GGD++ L C + VG V Sbjct 61 RTLLSALPEGVAAGDYTTSAEDKPAIAVTERTAGEWDGGDVAALARSCPDIAVGAVRSEP 120 Query 167 TPAAVGPCRLPAPREFRNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRA 226 PA VG C LP REF +D MF ALR+G++ AAWT+TA PD+P+++++L+D K +LIRA Sbjct 121 RPARVGTCTLPDAREFPDDDAMFGALRSGRIDAAWTSTAAPDVPSEVVVLSD-KTSLIRA 179 Query 227 ENIVPLYRRNALTERQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLG 285 EN+VPLYRRN L E Q+LA+NE+AGVLDT +L MRRQ+A G DP VA WL EHPLG Sbjct 180 ENVVPLYRRNELNESQVLALNEIAGVLDTGSLADMRRQLAEGTDPGLVAGQWLEEHPLG 238 >gi|118473183|ref|YP_889304.1| ABC transporter substrate-binding protein [Mycobacterium smegmatis str. MC2 155] gi|118174470|gb|ABK75366.1| ABC transporter, quaternary amine uptake transporter (QAT) family protein, substrate-binding protein [Mycobacterium smegmatis str. MC2 155] Length=280 Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 149/283 (53%), Positives = 195/283 (69%), Gaps = 4/283 (1%) Query 3 ITRILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGFAA 62 + RIL + V+LA+ GC +G P + VG+ P +E+ L+ +Y AALR YG A Sbjct 1 MRRILVPAVLVVLALIAT-GCGGQSG--TPPIRVGAAPGAESALIGHLYAAALRYYGSPA 57 Query 63 HAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAGDY 122 + + LDS A TV+P FTGQ+L L P AS R+D QVYR ++SALPEG+AAGDY Sbjct 58 EVVETDEGLGALDSSAVTVLPGFTGQLLVALDPGASARADEQVYRDLLSALPEGVAAGDY 117 Query 123 TTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPREF 182 TT+A+DKPALV T++T +AW G DL+ L HC + G VAGA PAA+G C P F Sbjct 118 TTSAQDKPALVATEATTRAWDGTDLAALRRHCAQVRPGAVAGAQVPAAIGQCTPAKPVRF 177 Query 183 RNDATMFAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTERQ 242 ++ T+FAAL AG++ AW+ TADP+IP+ L++L D + +LIRAENIVPLYRRN L ERQ Sbjct 178 DDEDTLFAALDAGRINVAWSRTADPEIPSHLVVLAD-RTSLIRAENIVPLYRRNELDERQ 236 Query 243 LLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLG 285 + A+NE+AGVLDT +L MRR+VA GADP AVA +L +PLG Sbjct 237 IRALNEIAGVLDTGSLADMRRKVAEGADPGAVADEFLQANPLG 279 >gi|289749786|ref|ZP_06509164.1| lipoprotein lpqZ [Mycobacterium tuberculosis T92] gi|289690373|gb|EFD57802.1| lipoprotein lpqZ [Mycobacterium tuberculosis T92] Length=88 Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 87/88 (99%), Positives = 88/88 (100%), Gaps = 0/88 (0%) Query 17 VSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGFAAHAETAADPVAKLDS 76 +SGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGFAAHAETAADPVAKLDS Sbjct 1 MSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGFAAHAETAADPVAKLDS 60 Query 77 GAFTVVPAFTGQMLQTLQPDASVRSDAQ 104 GAFTVVPAFTGQMLQTLQPDASVRSDAQ Sbjct 61 GAFTVVPAFTGQMLQTLQPDASVRSDAQ 88 >gi|169628476|ref|YP_001702125.1| lipoprotein LpqZ [Mycobacterium abscessus ATCC 19977] gi|169240443|emb|CAM61471.1| Probable lipoprotein LpqZ [Mycobacterium abscessus] Length=277 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 113/275 (42%), Positives = 164/275 (60%), Gaps = 6/275 (2%) Query 13 VLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGFAAHAETAADPVA 72 +L AV+ +AGCS + G P L V +T D++ +LA IY A +++ G +ADPV Sbjct 2 LLAAVAVLAGCSENHGP-APYLTVVTTNDAQYRVLAHIYAAVVKATGIDTKVRESADPVT 60 Query 73 KLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQV-YRAIVSALPEGIAAGDYTTAAEDKPA 131 +LD+G +V P FTG++L+ P D + Y+A+++ALP G+AA DY TA ED+ A Sbjct 61 ELDTGIASVAPGFTGRVLRRFAPQQRPSGDEETAYKAMIAALPAGVAAADYGTA-EDRAA 119 Query 132 LVVTQSTAKAWGGGDLSELPSHCRGLLVG-RVAGAHTP-AAVGPCRLPAPREFRNDATMF 189 L VT S+ A L+ HC L G +V P +G C PR++ + +F Sbjct 120 LAVT-SSPGASAKPTLAAFVRHCDQLARGGQVGQGPVPLPRIGSCATGTPRQYASAGELF 178 Query 190 AALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTERQLLAVNEV 249 AALR G++ AWT+TA+P +PAD + L D + + A ++VPLYRRN LTE Q+L++N+V Sbjct 179 AALRRGEVAVAWTSTANPALPADGVTLLDDEKQWLPANSVVPLYRRNELTEAQVLSLNKV 238 Query 250 AGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPL 284 AG L T L M R+V+ GADP V WL +H + Sbjct 239 AGELTTGDLAAMTREVSGGADPQRVVGTWLNDHQI 273 >gi|111022968|ref|YP_705940.1| amino acid ABC transporter substrate-binding protein [Rhodococcus jostii RHA1] gi|110822498|gb|ABG97782.1| probable ABC amino acid transporter, substrate binding component [Rhodococcus jostii RHA1] Length=342 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 100/263 (39%), Positives = 134/263 (51%), Gaps = 16/263 (6%) Query 33 ELVVGSTPDSEAMLLAAIYVAALRSYGFAAHAETA-ADPVA---KLDSGAFTVVPAFTGQ 88 E+VVG+ +E+ +LA IY ALRS G + D A +LD+G T+VP FTG+ Sbjct 82 EIVVGAGDGAESRILAEIYAGALRSTGAPVTTDGGLGDRTAYLGQLDAGNVTLVPEFTGR 141 Query 89 MLQTLQPDASVRSDAQVYRAIVSALPEGIAAGDYTTAAEDKPALVVTQSTAKAWGGGDLS 148 +L+ P+++ V+ A+ ALP+G++ DY AAED+ AL VT T+ L Sbjct 142 LLRYYDPESTETEQDDVFEALSKALPQGLSISDYA-AAEDRSALAVTSQTSGQLDLTTLD 200 Query 149 ELPSHCR---GLLVGRVAGAHTPAAVGPCRLPAPREFRNDATMFAALRA-----GQLVAA 200 EL C +L P G C R +DA L A G + A Sbjct 201 ELAPSCSRSTAVLAPAFEADALPDLTG-CTFAQTRTVADDAAAVGELAAPASTDGAVRVA 259 Query 201 WTTTADPDIP-ADLIMLTDGKPALIRAENIVPLYRRNALTERQLLAVNEVAGVLDTTALI 259 TTA PD+ ADL++L D + + A+N+VPL+R LTE QL A+N VAG L T L Sbjct 260 GVTTASPDVSDADLVLLADDEH-VFTAQNVVPLFRIGTLTEAQLKALNVVAGELTTADLA 318 Query 260 GMRRQVAAGADPAAVAAGWLAEH 282 M QV GAD A VA WL H Sbjct 319 DMIGQVRGGADSADVARVWLDAH 341 >gi|226365474|ref|YP_002783257.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4] gi|226243964|dbj|BAH54312.1| putative ABC transporter substrate-binding protein [Rhodococcus opacus B4] Length=315 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 100/266 (38%), Positives = 137/266 (52%), Gaps = 23/266 (8%) Query 33 ELVVGSTPDSEAMLLAAIYVAALRSYGF-AAHAETAADPVA---KLDSGAFTVVPAFTGQ 88 E+VVG+ +E+ +LA IY ALRS G E D A +LD+G T+VP FTG+ Sbjct 56 EIVVGAGDGAESRVLAEIYAGALRSTGAPVTTDEGLGDRTAYLGQLDAGTVTLVPEFTGR 115 Query 89 MLQTLQPDASVRSDAQVYRAIVSALPEGIAAGDYTTAAEDKPALVVTQSTAKAWGGGDLS 148 +L+ P+++ V+ A+ ALP+G++ D+ AAED+ AL VT ++ G L Sbjct 116 LLRYYDPESTETEQDDVFEALSKALPQGLSISDFA-AAEDRSALAVTPQASERLGLTTLD 174 Query 149 ELPSHCRGLLVGRVAG-------AHTPAAVGPCRLPAPREFRNDATMFAALR----AGQL 197 +L C GR A T A + C R +DA L A Sbjct 175 DLVPSC-----GRSTAVLAPSFDADTLAGLPGCTFAQTRRVADDAAAVGELAVPAPADGA 229 Query 198 VAAWTTTADPDI-PADLIMLTDGKPALIRAENIVPLYRRNALTERQLLAVNEVAGVLDTT 256 V A TTA PD+ ADL++L+D + + A+N+VPL+R L+E QL A+N VAG L T Sbjct 230 VVAGVTTASPDVADADLMLLSDDE-HVFPAQNVVPLFRIGTLSEAQLKALNVVAGELTTA 288 Query 257 ALIGMRRQVAAGADPAAVAAGWLAEH 282 L M QV GAD A VA WL H Sbjct 289 DLADMIGQVRGGADSADVARVWLDAH 314 >gi|54026681|ref|YP_120923.1| putative transporter substrate-binding protein [Nocardia farcinica IFM 10152] gi|54018189|dbj|BAD59559.1| putative transporter substrate-binding protein [Nocardia farcinica IFM 10152] Length=294 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 96/291 (33%), Positives = 135/291 (47%), Gaps = 15/291 (5%) Query 5 RILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGFAAHA 64 R+LA +L LAV V+ SA+ P VVG+ +E+ +LA IY AL G Sbjct 8 RVLARMLVAALAVFAVSCGSAED---EPVFVVGAGDSAESRVLAEIYAGALARTGLPVRV 64 Query 65 ETA----ADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAG 120 T A +A LD+GA +V TG +L A V + A+V A+ +LPEG+ Sbjct 65 RTGLGDRAGTLAALDAGAVGLVGEHTGALLAAFDGTAEVTTPAEVGTALNRSLPEGLVVA 124 Query 121 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVG--RVAGAHTPAA---VGPCR 175 D +A+ +P L+V A+ G + L C G V G P A V C Sbjct 125 DPAESADLRPRLLVEPVAARRDGLDSVRALIPRCPATTAGVATVPGLLPPGAAIRVAECE 184 Query 176 LPAPREFRNDATMFAALRAGQLVAAWTTTADPDIPA--DLIMLTDGKPALIRAENIVPLY 233 A F + + A+R G + T +PA L +L D A +RAEN+VPL Sbjct 185 FAAVTSFPSPEALVQAVRTGVVGVGVLTGPPELVPAADGLTVLADEDFA-VRAENVVPLL 243 Query 234 RRNALTERQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPL 284 R+ L +++ +N VAG L T L+ + R V G+ PA A WL H L Sbjct 244 RKGVLDDQRTRKLNYVAGELTTAELVELVRAVGTGSAPAESARQWLDAHGL 294 >gi|325676399|ref|ZP_08156077.1| amino acid ABC superfamily ATP binding cassette transporter, substrate-binding protein [Rhodococcus equi ATCC 33707] gi|325552577|gb|EGD22261.1| amino acid ABC superfamily ATP binding cassette transporter, substrate-binding protein [Rhodococcus equi ATCC 33707] Length=308 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 101/304 (34%), Positives = 145/304 (48%), Gaps = 40/304 (13%) Query 7 LALLLAVLLAVSGVAGCSADTGDRH-----PELVVGSTPDSEAMLLAAIYVAAL----RS 57 LA L V+ AV C DT R P +V+G+ E+ L+A +Y AL RS Sbjct 16 LAAWLTVVPAVVIATACGVDTSSRTGGPTAPTVVIGAADTVESELVARLYAGALGANGRS 75 Query 58 YGFAAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGI 117 AD +A LD+ ++VP TG++L P A VY A+ +LP+G+ Sbjct 76 TELVLGLGDQADRLAALDADRVSLVPEHTGRLLHRFDPTADATEAEDVYDALSRSLPQGL 135 Query 118 AAGDYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLV------GRVAGA------ 165 + +Y A+D+ ALV+T+ A++WG +++L C L + AGA Sbjct 136 SVSEY-APADDRSALVLTEQQAESWGASSVADLAPRCSTLSLHASDDFASDAGALDRLQA 194 Query 166 ---HTPAAVGPCRLP--APREFRNDATMFAALRAGQLVAAWTTTADPDIPAD-LIMLTDG 219 T A V P R P A RE A + A+ G TT ADP I D L++LTD Sbjct 195 RYGCTFAEVVPTRSPAGATREL---AVVGASPVRG------TTAADPVIAQDELVVLTDD 245 Query 220 KPALIRAENIVPLYRRNALTERQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAG-W 278 + A A+N++PL+R LT + +++ V L T L M +V G +A AAG W Sbjct 246 EGAFT-AQNVIPLFRSGVLTADDIRSLSVVLQ-LSTDDLTAMAARVRDGEISSADAAGVW 303 Query 279 LAEH 282 L EH Sbjct 304 LEEH 307 >gi|258651637|ref|YP_003200793.1| glycine betaine ABC transporter substrate-binding protein [Nakamurella multipartita DSM 44233] gi|258554862|gb|ACV77804.1| Substrate-binding region of ABC-type glycine betaine transport system [Nakamurella multipartita DSM 44233] Length=324 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 90/272 (34%), Positives = 134/272 (50%), Gaps = 32/272 (11%) Query 33 ELVVGSTPDSEAMLLAAIYVAALRSYGFAAHAETAADP----VAKLDSGAFTVVPAFTGQ 88 ++VVGS E+ LLA IY AAL G A + + G+ +VP ++G Sbjct 61 KIVVGSANFPESALLANIYAAALTKAGLDASTNLNIGSREVYIKAIQDGSIDLVPEYSGV 120 Query 89 MLQTLQPDASVRSDAQVYRAIVSALPEGIAAGDYTTAAEDKPALVVTQSTAKAWGGGDLS 148 +LQ P A+ S VY A+V A P+G+ + +AAEDK A+VVT++TA+A ++ Sbjct 121 LLQYFDPTATAVSADDVYAALVKATPQGLVVLE-KSAAEDKDAVVVTKATAEANNLTSIA 179 Query 149 ELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPRE-----FRNDATMFAALRAG-------- 195 +L ++G + T P +P +E F+ F AL AG Sbjct 180 DLAPVASTFILGGPSEWETR----PTGVPGLKEKYGLTFKE----FKALDAGGPLTLNAL 231 Query 196 ---QLVAAWTTTADPDIPA-DLIMLTDGKPALIRAENIVPLYRRNALTERQLLAVNEVAG 251 Q+ A T DP IPA DL++L D K L A+N++PL R +A + A+N V+ Sbjct 232 LSDQVQAGNLFTTDPAIPANDLVVLEDPK-NLFAAQNVLPLIRSDANNAQVTEALNAVSA 290 Query 252 VLDTTALIGMRRQVAAGA-DPAAVAAGWLAEH 282 LDT L + +VA D A VA W+A++ Sbjct 291 KLDTATLTELLTKVAVDKQDSAQVAQEWVAQN 322 >gi|312138894|ref|YP_004006230.1| glycine/betaine ABC transporter substrate-binding protein [Rhodococcus equi 103S] gi|311888233|emb|CBH47545.1| putative ABC-type glycine betaine transporter substrate binding lipoprotein [Rhodococcus equi 103S] Length=308 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 101/304 (34%), Positives = 145/304 (48%), Gaps = 40/304 (13%) Query 7 LALLLAVLLAVSGVAGCSADTGDRH-----PELVVGSTPDSEAMLLAAIYVAAL----RS 57 LA L V+ AV C DT R P +V+G+ E+ L+A +Y AL RS Sbjct 16 LAAWLTVVPAVVIATACGVDTSSRTGGPTAPTVVIGAADTVESELVARLYAGALGASGRS 75 Query 58 YGFAAHAETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGI 117 AD +A LD+ ++VP TG++L P A VY A+ +LP+G+ Sbjct 76 TELVLGLGDQADRLAALDADRVSLVPEHTGRLLHRFDPTADATEAEDVYDALSRSLPQGL 135 Query 118 AAGDYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLV------GRVAGA------ 165 + +Y A+D+ ALV+T+ A++WG +++L C L + AGA Sbjct 136 SVSEY-APADDRSALVLTEQQAESWGASSVADLAPRCSTLSLHASDDFASDAGALDRLQA 194 Query 166 ---HTPAAVGPCRLP--APREFRNDATMFAALRAGQLVAAWTTTADPDIPAD-LIMLTDG 219 T A V P R P A RE A + A+ G TT ADP I D L++LTD Sbjct 195 RYGCTFAEVVPTRSPAGATREL---AVVGASPVRG------TTAADPVIAQDELVVLTDD 245 Query 220 KPALIRAENIVPLYRRNALTERQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAG-W 278 + A A+N++PL+R LT + +++ V L T L M +V G +A AAG W Sbjct 246 EGAFT-AQNVIPLFRSGVLTADDVRSLSVVLQ-LSTDDLTAMAARVRDGEISSADAAGVW 303 Query 279 LAEH 282 L EH Sbjct 304 LEEH 307 >gi|116671385|ref|YP_832318.1| substrate-binding region of ABC-type glycine betaine transport system [Arthrobacter sp. FB24] gi|116611494|gb|ABK04218.1| Substrate-binding region of ABC-type glycine betaine transport system [Arthrobacter sp. FB24] Length=318 Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 78/267 (30%), Positives = 128/267 (48%), Gaps = 18/267 (6%) Query 34 LVVGSTPDSEAMLLAAIYVAALRSYGFAAHAETAADP----VAKLDSGAFTVVPAFTGQM 89 LV+GS E+ ++A IY AL + G A + + G+ V+P ++G + Sbjct 52 LVIGSADFPESQIIAEIYAGALNAAGVTASTKPNIGSREVYFKAVQDGSVDVIPDYSGNL 111 Query 90 LQTLQPDASVRSDAQVYRAIVSALPEGIAAGDYTTAAEDKPALVVTQSTAKAWGGGDLSE 149 L + +A+ S +Y+A+ + LPEG+A + + AEDK A+VVT++TA+ + + + Sbjct 112 LLHVNKEATEVSAEDIYKALPAKLPEGLAVLE-ASKAEDKDAMVVTKATAEKYQLKSIED 170 Query 150 LPSHCRGLLVGRVA----------GAHTPAAVGPCRLPAPREFRNDATMFAALRAGQLVA 199 L C L+VG A G + P +L + T+ A L VA Sbjct 171 LAKVCSELVVGAPATFAERAYGLPGLKKNYSCEPKKLEPFSDGGGPITVKALLEDKVQVA 230 Query 200 AWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTERQLLAVNEVAGVLDTTALI 259 TT DL++L D K I A+ ++PLY + +T++ A+N V+ +L T LI Sbjct 231 DIYTTTPAIADNDLVVLDDPKNNFI-AQQVLPLYNKAKMTDKAKEALNSVSKILTTEDLI 289 Query 260 GMRRQVAA--GADPAAVAAGWLAEHPL 284 + R V+ +P AA WL + L Sbjct 290 NLNRAVSGTQKQNPKDAAAAWLKDKGL 316 >gi|319950432|ref|ZP_08024347.1| putative ABC transport system substrate binding protein [Dietzia cinnamea P4] gi|319435896|gb|EFV91101.1| putative ABC transport system substrate binding protein [Dietzia cinnamea P4] Length=292 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 94/289 (33%), Positives = 141/289 (49%), Gaps = 33/289 (11%) Query 19 GVAGCSADTG-----DRHPELVVGSTPDSEAMLLAAIYVAALRSYGFAAHAE----TAAD 69 G++GC A + P +V+ + EA ++ IY AL G A T A+ Sbjct 10 GLSGCQAQSSIVPAHRDDPVVVIETASFGEAEIVGHIYGNALVRSGSRVTARPQSGTQAE 69 Query 70 PVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAGDYTTAAEDK 129 V + +G T FTG++L A+ +VY A+++ALPEG+ A AED Sbjct 70 VVESVVTGDATFTVGFTGELLTAFDSGATATEGDEVYAAMMAALPEGVTA-ADPAPAEDA 128 Query 130 PALVVTQSTAKAWGGGDLSELPSHCRGLLVG----RVAGAHTPAAVGP---CRL------ 176 P VVT++T++ G +S+L C +G +A AAVG C Sbjct 129 PVYVVTRNTSETRGLRAMSDLTGRCGEFTLGARQEALADGDLAAAVGEAYDCGFGRRVAL 188 Query 177 -PAPREFRNDATMFAALRAGQLVAAWTTTADP-DIPADLIMLTDGKPALIRAENIVPLYR 234 P PR +F ALRAGQ+ +ADP +P D++ L D + A +RA+N+VP++R Sbjct 189 GPNPR------AVFDALRAGQVGVGLVQSADPVGLPEDIVTLDDDENA-VRAQNLVPIFR 241 Query 235 RNALTERQLLAVNEVAGVLDTTALIGMRRQVAAG-ADPAAVAAGWLAEH 282 + +L+E QL VN ++G L T + + V G A P A+A WL H Sbjct 242 KGSLSEDQLSLVNRISGELTTDDVRELLLGVEFGTATPVALANYWLDSH 290 >gi|270262698|ref|ZP_06190969.1| transporter [Serratia odorifera 4Rx13] gi|270043382|gb|EFA16475.1| transporter [Serratia odorifera 4Rx13] Length=294 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 89/312 (29%), Positives = 137/312 (44%), Gaps = 44/312 (14%) Query 1 VRITRILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGF 60 +++ +LA+ L V SAD G +++GS E+ LLA IY AL + Sbjct 1 MKLKNLLAVALFSAAVVHAPVALSADAGGT---IIIGSADFPESQLLATIYEQALAAKNV 57 Query 61 AAHAETAADPVAK------LDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALP 114 ET + ++ L G+ +++P ++G L L S V A+ ALP Sbjct 58 --KVETKLNIGSREVYMPALLDGSISLIPEYSGATLSYLDEKTQAHSSEDVAAALAKALP 115 Query 115 EGIAAGDYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPC 174 E I D +AA+D+ L VT+ TAK + D+S+L + L++G GP Sbjct 116 EKIKMLD-ISAAQDRDVLAVTEKTAKKYNLKDISDLAPIAKTLVLG-----------GPA 163 Query 175 RLPAPRE------------FRNDATM-------FAALRAGQLVAAWTTTADPDIPA-DLI 214 RE F+N + +AL Q+ A T+ DP I +L+ Sbjct 164 EWKTRREGVRGLSEVYGLTFKNFKVLDVAGPLTLSALTNNQIQVADMTSTDPAIKTKNLV 223 Query 215 MLTDGKPALIRAENIVPLYRRNALTERQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAV 274 L D K L A+NIVPL ++ +E + V+ L T+ LI M ++A AV Sbjct 224 ALEDSKH-LFPAQNIVPLIAKDKASEVVETTLKAVSAQLTTSDLIVMNGKLANFESVDAV 282 Query 275 AAGWLAEHPLGR 286 A WL +H L + Sbjct 283 AKEWLTQHGLNK 294 >gi|311899549|dbj|BAJ31957.1| putative osmoprotectant ABC transporter substrate-binding protein [Kitasatospora setae KM-6054] Length=310 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 83/271 (31%), Positives = 122/271 (46%), Gaps = 33/271 (12%) Query 34 LVVGSTPDSEAMLLAAIYVAALRSYGFAAHAETAADP----VAKLDSGAFTVVPAFTGQM 89 +VVGS E +LLA+IY AL++ G + ++ SGA TV+P + G + Sbjct 52 VVVGSANFPENVLLASIYAQALKAKGVKVEEKFNIGSREVLYGQVQSGALTVLPEYNGAL 111 Query 90 LQTLQPDASVRSDAQVYRAIVSALPEGIAAGDYTTAAEDKPALVVTQSTAKAWGGGDLSE 149 L L ++ V + + LP G+A D ++AAEDK +L VTQ TA G +++ Sbjct 112 LGYLDAKSTATGKDAVNTELKAKLPAGLAILD-SSAAEDKDSLTVTQETADKLGVKSIAD 170 Query 150 LPSHCRGLLVGRVAGAHTPAAVGPCRLPAPRE--FRN------------DATMFAALRAG 195 L + L+VG GP + RE F++ T AL+ G Sbjct 171 LAGKAQDLVVG-----------GPPEFKSRREQQFKDVYGLTFKEWKPTGETTANALKDG 219 Query 196 QLVAAWTTTADPDI-PADLIMLTDGKPALIRAENIVPLYRRNALTERQLLAVNEVAGVLD 254 + T DP I L+ L D K + ++N+ PL L A+N V+ LD Sbjct 220 GIQVGNVFTTDPKIVQLKLVSLADPK-NVFSSQNVTPLVNTAGLDATGTAALNAVSAKLD 278 Query 255 TTALIGMRRQVAAGA-DPAAVAAGWLAEHPL 284 T L + ++VA DPAAVA WL L Sbjct 279 TAGLTALMKRVAVDKEDPAAVAKDWLKSSGL 309 >gi|119963096|ref|YP_948524.1| glycine betaine/choline-binding protein of an ABC-type transport system [Arthrobacter aurescens TC1] gi|119949955|gb|ABM08866.1| glycine betaine/choline-binding protein of an ABC-type transport system [Arthrobacter aurescens TC1] Length=318 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 76/265 (29%), Positives = 125/265 (48%), Gaps = 18/265 (6%) Query 34 LVVGSTPDSEAMLLAAIYVAALRSYGFAAHAETAADP----VAKLDSGAFTVVPAFTGQM 89 LVVGS E+ ++A IYV AL + G A ++ + G+ +VP ++G + Sbjct 52 LVVGSADFPESQVIAEIYVGALNAAGLTATSKPNIGSREIYFKAVQDGSVDLVPDYSGNL 111 Query 90 LQTLQPDASVRSDAQVYRAIVSALPEGIAAGDYTTAAEDKPALVVTQSTAKAWGGGDLSE 149 L + +A+ S VY+A+ LP+G+A + AE K A+VVT++TA+ + + + Sbjct 112 LSYVDTEATEVSAEDVYKALPGKLPDGLAVLE-PAKAESKDAMVVTKATAEKYQLKSIED 170 Query 150 LPSHCRGLLVGRVAGAHTPAAVGP-------CRLPAPREFRN---DATMFAALRAGQLVA 199 L C+ + A T A P C L + F + + T+ A L VA Sbjct 171 LAKVCKDFTMAAPATFETRAYGFPGLKANYGCELKGLQPFNDGGGNLTLQALLEDKVQVA 230 Query 200 AWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTERQLLAVNEVAGVLDTTALI 259 TT DL++L D K +A+ ++PL + +T++ A+N V+ +L T LI Sbjct 231 DIYTTTPSIADNDLVVLEDPKNNF-KAQQVLPLVKEAKMTDKAKEALNNVSKILTTDDLI 289 Query 260 GMRRQVAAGAD--PAAVAAGWLAEH 282 + R V+ P AA WL + Sbjct 290 NLNRAVSGDQKQSPKDAAAAWLKDK 314 >gi|322833073|ref|YP_004213100.1| Substrate-binding region of ABC-type glycine betaine transport system [Rahnella sp. Y9602] gi|321168274|gb|ADW73973.1| Substrate-binding region of ABC-type glycine betaine transport system [Rahnella sp. Y9602] Length=294 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 89/312 (29%), Positives = 137/312 (44%), Gaps = 44/312 (14%) Query 1 VRITRILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGF 60 +++ +LA+ L V A SA+TG +++GS E+ L+A IY AL + Sbjct 1 MKLKNLLAVALFSAAVVHAPAAFSAETGGT---IIIGSADFPESQLIATIYQQALAAKN- 56 Query 61 AAHAETAADPVAK------LDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALP 114 ET + ++ L G+ ++P ++G L L S V A+ ALP Sbjct 57 -VKVETKLNIGSREVYMPALLDGSINLIPEYSGATLSYLDEKTQAHSAEDVAAALAKALP 115 Query 115 EGIAAGDYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPC 174 E I D +AA+D L VT+ TAK + D+S+L + L++G GP Sbjct 116 EKIKMLD-ISAAQDSDVLAVTEKTAKKYNLKDISDLAPVAKTLVLG-----------GPA 163 Query 175 RLPAPRE------------FRNDATM-------FAALRAGQLVAAWTTTADPDIPA-DLI 214 RE F+N + +AL Q+ A T+ DP + +L+ Sbjct 164 EWKTRREGVKGLNEVYGLTFKNFKVLDVAGPLTLSALTNNQIQVADMTSTDPAMKTKNLV 223 Query 215 MLTDGKPALIRAENIVPLYRRNALTERQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAV 274 L D K L A+NIVPL ++ +E +N V+ L T+ LI M ++A AV Sbjct 224 ALEDSKH-LFPAQNIVPLIAKDKASEVVETTLNNVSRQLTTSDLIVMNGKLANFESVDAV 282 Query 275 AAGWLAEHPLGR 286 A WL H L + Sbjct 283 AKEWLTGHGLNK 294 >gi|331698881|ref|YP_004335120.1| glycine betaine ABC transporter periplasmic subunit [Pseudonocardia dioxanivorans CB1190] gi|326953570|gb|AEA27267.1| ABC-type glycine betaine transport, periplasmic subunit [Pseudonocardia dioxanivorans CB1190] Length=306 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 78/270 (29%), Positives = 127/270 (48%), Gaps = 29/270 (10%) Query 34 LVVGSTPDSEAMLLAAIYVAALRSYGFAAHAETAADPVAK-------LDSGAFTVVPAFT 86 +V+GS E+ ++A IY AL++ G P+ + G+ ++P +T Sbjct 43 VVIGSANFVESQIIANIYAQALQAKGVKVDLRP---PIGSRETYFPAIKEGSIDLIPEYT 99 Query 87 GQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAGDYTTAAEDKPALVVTQSTAKAWGGGD 146 G +LQ L +A+ VY A+ +ALP+ + D AAEDK A+VVT+ TA + Sbjct 100 GTLLQYLNKNATETEPDAVYTALKAALPDNLTVLD-KAAAEDKDAVVVTKDTATKYNATS 158 Query 147 LSELPSHCRGLLVG-------RVAGAHTPAAVGPCRLPAPREFRN-DA---TMFAALRAG 195 +++L +C L G R G C +E++ DA AAL+ G Sbjct 159 IADLAPNCGQLTFGGPPEFQTRPDGIPGIQKTYNCTF---KEYKALDAGGPLTVAALKNG 215 Query 196 QLVAAWTTTADPDIPAD-LIMLTDGKPALIRAENIVPLYRRNALTERQLLAVNEVAGVLD 254 + AA T D IP + ++LTD K A+N+VPL + T +N+++ L Sbjct 216 DIQAADIFTTDASIPTNGFVVLTDPKDNF-AAQNVVPLINKAKGTGTTADVLNQISAKLT 274 Query 255 TTALIGMRRQVAAGADP--AAVAAGWLAEH 282 T L + + ++ A P A VA WL+++ Sbjct 275 TEGLTQLNAEASSDAKPSLATVAKNWLSQN 304 >gi|220913299|ref|YP_002488608.1| glycine betaine ABC transporter substrate-binding protein [Arthrobacter chlorophenolicus A6] gi|219860177|gb|ACL40519.1| Substrate-binding region of ABC-type glycine betaine transport system [Arthrobacter chlorophenolicus A6] Length=320 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 76/265 (29%), Positives = 121/265 (46%), Gaps = 18/265 (6%) Query 34 LVVGSTPDSEAMLLAAIYVAALRSYGFAAHAETAADP----VAKLDSGAFTVVPAFTGQM 89 L VGS E+ ++A +Y AL + G A + + G+ VVP +TG + Sbjct 54 LTVGSADFPESQIIAELYAGALNAAGVTATTKPNIGSREVYFKAVQDGSVDVVPDYTGNL 113 Query 90 LQTLQPDASVRSDAQVYRAIVSALPEGIAAGDYTTAAEDKPALVVTQSTAKAWGGGDLSE 149 L + +A+ S +Y+A+ L +G+A + + AEDK A+VVT++TA+ + + + Sbjct 114 LLYVDKEATQVSADDIYKALPDKLADGLAVAE-ASKAEDKDAMVVTKATAEKYQLKSIED 172 Query 150 LPSHCRGLLVGRVA----------GAHTPAAVGPCRLPAPREFRNDATMFAALRAGQLVA 199 L C ++VG A G P +L + T+ A L VA Sbjct 173 LAKVCSEIVVGAPATFAERAYGLPGLKKNYNCEPKKLEPFSDGGGPVTLKALLEDQVQVA 232 Query 200 AWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTERQLLAVNEVAGVLDTTALI 259 TT DL++L D K I A+ +VPLY +T++ A+N V+ +L T LI Sbjct 233 DIYTTTPSIADNDLVVLEDPKNNFI-AQQVVPLYNEKNMTDKAKEALNSVSRILTTDDLI 291 Query 260 GMRRQVAAGADPAA--VAAGWLAEH 282 + R V+ A AA WL + Sbjct 292 NLNRAVSGSQKQNAKDAAAAWLKDK 316 >gi|226307615|ref|YP_002767575.1| ABC transporter substrate-binding protein [Rhodococcus erythropolis PR4] gi|226186732|dbj|BAH34836.1| putative ABC transporter substrate-binding protein [Rhodococcus erythropolis PR4] Length=312 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 81/299 (28%), Positives = 139/299 (47%), Gaps = 29/299 (9%) Query 12 AVLLAVSGVAGCSADTGDRHPE---LVVGSTPDSEAMLLAAIYVAALRSYGF----AAHA 64 A +++++ + C + GD + + +VVGS +E+ +A IY ALR GF + + Sbjct 16 ATVVSLTALTACGSSDGDSNSDPNAVVVGSANFTESETIANIYAEALRVNGFDVSTSFNV 75 Query 65 ETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAGDYTT 124 + + L G+ +V+P +TG +LQ L PD++ S A V A+ +AL +A Sbjct 76 GSREAYIPALKDGSISVIPDYTGNLLQYLDPDSTATSSADVLAALPAALGSELAIA-TPA 134 Query 125 AAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPREFRN 184 +AEDK A+VVT+ TA+ W +++L H + G A P LP + Sbjct 135 SAEDKDAVVVTKETAEKWNLKTIADLAPHSAEVKFGAPAEFQE----RPAGLPGLKSNYG 190 Query 185 ---DATMF------------AALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENI 229 A F AL +G + AA T IPA+ ++ + A+N+ Sbjct 191 LDISAANFVPIADGGGPATVKALSSGDITAANIFTTSASIPANNFVVLEDPKNNFPAQNV 250 Query 230 VPLYRRNALTERQLLAVNEVAGVLDTTALIGMRRQVA--AGADPAAVAAGWLAEHPLGR 286 VP+ R + +++ ++ V+ L T L+ + QV+ +PAA A W+ L + Sbjct 251 VPVLRASKSSDKLKTVLDAVSAKLTTEELLALNVQVSGDTKTEPAAAAKAWVTAQGLDK 309 >gi|317123456|ref|YP_004097568.1| substrate-binding region of ABC-type glycine betaine transporter [Intrasporangium calvum DSM 43043] gi|315587544|gb|ADU46841.1| Substrate-binding region of ABC-type glycine betaine transport system [Intrasporangium calvum DSM 43043] Length=307 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 84/276 (31%), Positives = 129/276 (47%), Gaps = 14/276 (5%) Query 15 LAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGFAAHAE----TAADP 70 LA S AG +A TG + +GS E+ LL IY AL + G + Sbjct 29 LAPSQPAGTNAGTGGAS-SVTIGSADFPESALLGEIYAQALEAKGVTVQRQFNIGNRETY 87 Query 71 VAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAGDYTTAAEDKP 130 + ++ G ++P +TG + + + +VY A+ S LP G+ +TA EDK Sbjct 88 LKAIEGGEVDILPEYTGSLTNYFDKTVTATNPDEVYDALKSKLPGGLTVLAKSTA-EDKN 146 Query 131 ALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHT--PAAVGPCRLP--APREFRNDA 186 ++VVT+ TA AW + +L +H L + T VG + P+EFR A Sbjct 147 SMVVTKETADAWSLKAIPDLVAHQDELSIAAPPEFRTRQQGLVGLKEVYNLEPKEFRPLA 206 Query 187 TM--FAALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENIVPLYRRNALTERQLL 244 + AL+ GQ+ AA + DP I A+ ++ + L ++N+VPL R + Q Sbjct 207 SQATVEALKNGQVKAANIFSTDPSIAANGFVVLEDPELLFGSDNVVPLVRDDVAGSVQ-A 265 Query 245 AVNEVAGVLDTTALIGMRRQVAA-GADPAAVAAGWL 279 ++ V+ LDTTAL M +QV D + VA WL Sbjct 266 PLDAVSAKLDTTALADMVKQVVVDKKDASVVAKEWL 301 >gi|333928170|ref|YP_004501749.1| ABC-type glycine betaine transport, periplasmic subunit [Serratia sp. AS12] gi|333933123|ref|YP_004506701.1| ABC-type glycine betaine transport, periplasmic subunit [Serratia sp. AS9] gi|333474730|gb|AEF46440.1| ABC-type glycine betaine transport, periplasmic subunit [Serratia sp. AS9] gi|333492230|gb|AEF51392.1| ABC-type glycine betaine transport, periplasmic subunit [Serratia sp. AS12] gi|333962327|gb|AEG29100.1| ABC-type glycine betaine transport, periplasmic subunit [Serratia sp. AS13] Length=294 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 86/308 (28%), Positives = 134/308 (44%), Gaps = 41/308 (13%) Query 5 RILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGFAAHA 64 ++ LL L + + V A + D L++GS E+ L+A IY AL + Sbjct 2 KLKNLLAVALFSAAVVHAPVALSADASGTLIIGSADFPESQLIATIYEQALAAKNV--KV 59 Query 65 ETAADPVAK------LDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIA 118 ET + ++ L G+ ++P ++G L L S V A+ ALPE I Sbjct 60 ETKLNIGSREVYMPALLDGSINLIPEYSGATLSYLDEKTQAHSSEDVAAALAKALPEKIK 119 Query 119 AGDYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPA 178 D +AA+D+ L VT+ TAK + D+S+L + L++G GP Sbjct 120 MLD-ISAAQDRDVLAVTEKTAKKYNLKDISDLAPVAKTLVLG-----------GPAEWKT 167 Query 179 PRE------------FRNDATM-------FAALRAGQLVAAWTTTADPDIPA-DLIMLTD 218 RE F+N + +AL Q+ A T+ DP I +L+ L D Sbjct 168 RREGVRGLSEVYGLTFKNFKVLDVAGPLTLSALTNNQIQVADMTSTDPAIKTKNLVALED 227 Query 219 GKPALIRAENIVPLYRRNALTERQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGW 278 K L A+NIVPL ++ ++ + V+ L T+ LI M ++A AVA W Sbjct 228 SKH-LFPAQNIVPLIAKDKASDVVETTLKAVSAQLTTSDLIVMNGKLANFESVDAVAKEW 286 Query 279 LAEHPLGR 286 L +H L + Sbjct 287 LTQHGLNK 294 >gi|229493759|ref|ZP_04387541.1| ABC amino acid transporter, substrate binding component [Rhodococcus erythropolis SK121] gi|229319359|gb|EEN85198.1| ABC amino acid transporter, substrate binding component [Rhodococcus erythropolis SK121] Length=312 Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 80/299 (27%), Positives = 137/299 (46%), Gaps = 29/299 (9%) Query 12 AVLLAVSGVAGCSADTGDRHPE---LVVGSTPDSEAMLLAAIYVAALRSYGF----AAHA 64 A +++++ + C + GD + + +VVGS +E+ +A IY ALR GF + + Sbjct 16 ATVVSLTALTACGSSDGDSNSDPNAIVVGSANFTESETIANIYAEALRVNGFDVSTSFNV 75 Query 65 ETAADPVAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAGDYTT 124 + + L G+ +V+P +TG +LQ L PD++ S A V A+ +AL +A Sbjct 76 GSREAYIPALKDGSISVIPDYTGNLLQYLDPDSTATSSADVLAALPAALGSELAIA-TPA 134 Query 125 AAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLPAPREFRN 184 +AEDK A+VVT+ TA W +++L H + G A P LP + Sbjct 135 SAEDKDAVVVTKETADKWNLKTIADLAPHSAEVKFGAPAEFQE----RPAGLPGLKSNYG 190 Query 185 ---DATMF------------AALRAGQLVAAWTTTADPDIPADLIMLTDGKPALIRAENI 229 A F AL +G + AA T IP + ++ + A+N+ Sbjct 191 LDISAANFVPIADGGGPATVKALSSGDITAANIFTTSASIPENNFVVLEDPKNNFPAQNV 250 Query 230 VPLYRRNALTERQLLAVNEVAGVLDTTALIGMRRQVA--AGADPAAVAAGWLAEHPLGR 286 VP+ R + +++ ++ V+ L T L+ + QV+ +PAA A W+ L + Sbjct 251 VPVLRASKSSDKLKTVLDAVSAKLTTEELLALNVQVSGDTKTEPAAAAKAWVTAQGLDK 309 >gi|300744243|ref|ZP_07073262.1| glycine betaine/choline-binding protein of an ABC-type transport system [Rothia dentocariosa M567] gi|300379968|gb|EFJ76532.1| glycine betaine/choline-binding protein of an ABC-type transport system [Rothia dentocariosa M567] Length=306 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 81/290 (28%), Positives = 136/290 (47%), Gaps = 25/290 (8%) Query 14 LLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGFAAHAETAADP--- 70 +L+ G++G + G H ++VGS +E+ +LA IY AL GF + + Sbjct 22 VLSACGLSGENV-FGGEHDGIIVGSAAFAESQILAEIYSQALNKNGFKSSTQLGIGAREA 80 Query 71 -VAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAGDYTTAAEDK 129 + L SGA V+P ++G +L L +++ ++ ++ +A+ L + + A D + AE+K Sbjct 81 YLGALTSGAIDVIPEYSGNLLLYLDENSTAQTKQEILQALGGVLQDNLKALD-ASQAENK 139 Query 130 PALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGPCRLP-----APREFRN 184 LVVTQ TA+ + L +L C L +G A A G L P EF + Sbjct 140 DTLVVTQQTAQKYNLRTLDDLAKVCTELKIG-AAPEFAERAYGIPGLKDKYGCVPAEFVS 198 Query 185 DATMFAALRAG-------QLVAAWTTTADPDIPA-DLIMLTDGKPALIRAENIVPLYRRN 236 A AL Q+V ++TT P I + +ML D K +I A+ ++P+ Sbjct 199 LADGGGALTVKALQDNTVQVVDLYSTT--PAITQNNFVMLEDPKN-MIPAQQVLPIINTK 255 Query 237 ALTERQLLAVNEVAGVLDTTALIGMRRQVAAGA--DPAAVAAGWLAEHPL 284 + E +N ++ VL T L + +V+ DP+ AA WL + + Sbjct 256 RVPEDAQAVLNRISAVLTTDDLRSLNDEVSGDKKLDPSTAAANWLKDKGM 305 >gi|343928035|ref|ZP_08767500.1| putative ABC transporter substrate-binding protein [Gordonia alkanivorans NBRC 16433] gi|343762043|dbj|GAA14426.1| putative ABC transporter substrate-binding protein [Gordonia alkanivorans NBRC 16433] Length=332 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 96/322 (30%), Positives = 143/322 (45%), Gaps = 48/322 (14%) Query 1 VRITRILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGF 60 V +T ++A L VL+ GC + G P +V+GS+ D+ ++A +Y ALR+ G Sbjct 21 VVVTGLIAALAVVLV------GCGDEAGSPPPGIVIGSSEDAAMRVMAEVYAGALRNAGS 74 Query 61 AAHAET-AADPVA---KLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEG 116 A+ D A ++D + PAFTG +L L P ++ VY + +LP+G Sbjct 75 VVSADQLRGDDAALLDEMDRADVDLFPAFTGDLLTLLAPSSTAVGAEDVYVELNRSLPQG 134 Query 117 IAAGDYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAH-TPA-----A 170 ++ GD T + P + V+ + A + G L + GL V VA + PA A Sbjct 135 VSVGDETPVS-GAPQIFVSTTLAGSVGASGLDDCALLPPGLPV--VATSDPDPATLDAFA 191 Query 171 VGPCRL-PAPREFRNDATMFAA-------------------------LRAGQLVAAWTTT 204 CRL P D + A ++A + A T Sbjct 192 SAGCRLGPVETSGTTDEVLQRASEGNAVGLLTPLDIAGEDAEGASSDVQALRTSAGGGDT 251 Query 205 ADPDIPAD--LIMLTDGKPALIRAENIVPLYRRNALTERQLLAVNEVAGVLDTTALIGMR 262 AD + PAD T + + RAE +VP++R AL Q+ +N+VAG + T L M Sbjct 252 AD-NPPADEPRTERTPEEQSGPRAEVLVPVFRSAALNRDQVKTMNKVAGEITTADLATMA 310 Query 263 RQVAAGADPAAVAAGWLAEHPL 284 +V G DP VA WLAEH L Sbjct 311 GEVETGGDPREVALEWLAEHGL 332 >gi|255327621|ref|ZP_05368687.1| substrate-binding region of ABC-type glycine betaine transport system [Rothia mucilaginosa ATCC 25296] gi|255295295|gb|EET74646.1| substrate-binding region of ABC-type glycine betaine transport system [Rothia mucilaginosa ATCC 25296] Length=321 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 84/302 (28%), Positives = 139/302 (47%), Gaps = 33/302 (10%) Query 8 ALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGFAAHAETA 67 AL +A +L+ G++G +G+ H ++VGS +E+ +LA IY AL GF A + + Sbjct 24 ALGMAGILSACGLSGDKVFSGE-HEGIIVGSAAFAESQILAEIYAGALARSGFNARTQLS 82 Query 68 ADP----VAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAGD-- 121 + L SGA V+P ++G +L L P A+ + ++ RA+ +AL G Sbjct 83 IGAREAYLGALASGAVDVIPDYSGNLLLYLDPKATANTAQEILRALPAALGTLTTGGSGA 142 Query 122 -----YTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVG-------RVAGAHTPA 169 + AEDK +LVVT TA+ + L +L S C L +G R G Sbjct 143 EIRALNASEAEDKDSLVVTAQTAQKYSLRSLEDLASRCTNLKLGAAPEFAERAYGIPGLK 202 Query 170 AVGPCRLPAPREFRNDATMFAALRAG-------QLVAAWTTTADPDIPADLIMLTDGKPA 222 C P EF + AL Q+V ++TT P I + +++ + Sbjct 203 EKYGC---VPAEFVPLSDGGGALTVKALLDDTVQVVDLYSTT--PAIEQNKLVVLEDPKN 257 Query 223 LIRAENIVPLYRRNALTERQLLAVNEVAGVLDTTALIGMRRQVA--AGADPAAVAAGWLA 280 +I A+ ++P+ + + + +N V+ L T L + +V+ + +PA AA WL Sbjct 258 MILAQQVLPIINTSRVPDSAAEVLNRVSAKLTTADLRTLNDRVSGTSKQEPAQAAAAWLN 317 Query 281 EH 282 EH Sbjct 318 EH 319 >gi|261823746|ref|YP_003261852.1| substrate-binding region of ABC-type glycine betaine transporter [Pectobacterium wasabiae WPP163] gi|261607759|gb|ACX90245.1| Substrate-binding region of ABC-type glycine betaine transport system [Pectobacterium wasabiae WPP163] Length=293 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 83/295 (29%), Positives = 131/295 (45%), Gaps = 19/295 (6%) Query 5 RILALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGFAAHA 64 R L A LL+V+ + +AD G + +++GS E LLA IY AL + Sbjct 5 RYFTLFSAALLSVAS-SVWAADAGQK---VIIGSADFPENQLLATIYAGALEAQKIPVEK 60 Query 65 ETAADP----VAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAG 120 + + L G+ TV+P ++G +L L + S V +A+ + LPE + Sbjct 61 KLNIGSREVYIPALLDGSITVIPEYSGALLSYLDAKSEAHSSEDVAKALATKLPEKVKML 120 Query 121 DYTTAAEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVGRVAGAHTPAAVGP-CRLPAP 179 + T+ A++ LVVT+ TA + + +L L++G A T P R Sbjct 121 N-TSRAQNSDVLVVTKKTADKYKLKTIDDLKPVAGQLVLGGPAEWKTRHEGVPGLRDVYG 179 Query 180 REFRNDATM-------FAALRAGQLVAAWTTTADPDIPAD-LIMLTDGKPALIRAENIVP 231 F+ + AL+ Q+ A T+ P+I D L+ L D K L A+NIVP Sbjct 180 LNFKTFKVLDVAGPLTLTALKNNQIQVADLTSTTPEIKKDHLVALEDPK-HLFAAQNIVP 238 Query 232 LYRRNALTERQLLAVNEVAGVLDTTALIGMRRQVAAGADPAAVAAGWLAEHPLGR 286 + + L +N+++ L T LI M Q+A A VA WL +H L + Sbjct 239 IVASSTLNPTIESTLNKISAQLTTEDLIAMNEQLAEFASIDDVAHQWLVKHQLSK 293 >gi|283458826|ref|YP_003363468.1| ABC transporter periplasmic glycine betaine/choline-binding (lipo)protein [Rothia mucilaginosa DY-18] gi|283134883|dbj|BAI65648.1| periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system [Rothia mucilaginosa DY-18] Length=324 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 87/304 (29%), Positives = 142/304 (47%), Gaps = 37/304 (12%) Query 8 ALLLAVLLAVSGVAGCSADTGDRHPELVVGSTPDSEAMLLAAIYVAALRSYGFAAHAETA 67 AL +A +L+ G++G +G+ H ++VGS +E+ +LA IY AL GF A + + Sbjct 27 ALGMAGILSACGLSGDKVFSGE-HEGIIVGSAAFAESQILAEIYAGALARAGFNARTQLS 85 Query 68 ADP----VAKLDSGAFTVVPAFTGQMLQTLQPDASVRSDAQVYRAIVSALPEGIAAGDYT 123 + L SGA V+P ++G +L L P A+ + Q+ +A+ +AL G D + Sbjct 86 IGAREAYLGALASGAVDVIPDYSGNLLLYLDPKATASTAEQILQALPAAL--GTLKTDGS 143 Query 124 TA---------AEDKPALVVTQSTAKAWGGGDLSELPSHCRGLLVG-------RVAGAHT 167 A AEDK +LVVT TA+ +G L +L S C L +G R G Sbjct 144 GAEIRALNASEAEDKDSLVVTAQTAQKYGLRSLEDLASRCTNLKLGAAPEFAERAYGIPG 203 Query 168 PAAVGPCRLPAPREFRNDATMFAALRAG-------QLVAAWTTTADPDIPADLIMLTDGK 220 C P EF + AL Q+V ++TT P I + +++ + Sbjct 204 LKEKYGC---VPAEFVPLSDGGGALTVKALLDDTVQVVDLYSTT--PAIEQNQLVVLEDP 258 Query 221 PALIRAENIVPLYRRNALTERQLLAVNEVAGVLDTTALIGMRRQVA--AGADPAAVAAGW 278 +I A+ ++P+ + + + +N V+ L T L + +V+ + +PA AA W Sbjct 259 KNMILAQQVLPIINTSRVPDSAAEVLNRVSAKLTTADLRTLNDRVSGTSKQEPAQAAATW 318 Query 279 LAEH 282 L EH Sbjct 319 LNEH 322 Lambda K H 0.319 0.132 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 461491158592 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40