BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1246c
Length=97
Score E
Sequences producing significant alignments: (Bits) Value
gi|15840691|ref|NP_335728.1| hypothetical protein MT1284 [Mycoba... 199 9e-50
gi|15608386|ref|NP_215762.1| hypothetical protein Rv1246c [Mycob... 197 5e-49
gi|308373088|ref|ZP_07430958.2| toxin [Mycobacterium tuberculosi... 180 6e-44
gi|343928187|ref|ZP_08767642.1| hypothetical protein GOALK_110_0... 103 1e-20
gi|262202560|ref|YP_003273768.1| plasmid stabilization system [G... 99.8 1e-19
gi|296137985|ref|YP_003645228.1| plasmid stabilization system [T... 93.6 9e-18
gi|315443134|ref|YP_004076013.1| cytotoxic translational repress... 90.1 1e-16
gi|226887833|pdb|3G5O|B Chain B, The Crystal Structure Of The To... 90.1 1e-16
gi|15610003|ref|NP_217382.1| hypothetical protein Rv2866 [Mycoba... 89.7 1e-16
gi|333990698|ref|YP_004523312.1| hypothetical protein JDM601_205... 87.8 4e-16
gi|317126592|ref|YP_004100704.1| plasmid stabilization system [I... 87.0 8e-16
gi|284042315|ref|YP_003392655.1| plasmid stabilization system [C... 85.9 2e-15
gi|312195903|ref|YP_004015964.1| plasmid stabilization system [F... 85.9 2e-15
gi|167969495|ref|ZP_02551772.1| hypothetical protein MtubH3_1630... 84.0 7e-15
gi|284990456|ref|YP_003409010.1| plasmid stabilization system [G... 83.6 8e-15
gi|271969006|ref|YP_003343202.1| hypothetical protein Sros_7793 ... 82.8 1e-14
gi|323358565|ref|YP_004224961.1| cytotoxic translational repress... 81.6 3e-14
gi|50955753|ref|YP_063041.1| hypothetical protein Lxx22677 [Leif... 79.0 2e-13
gi|336179276|ref|YP_004584651.1| plasmid stabilization system [F... 79.0 3e-13
gi|336178296|ref|YP_004583671.1| plasmid stabilization system [F... 78.2 4e-13
gi|317125200|ref|YP_004099312.1| plasmid stabilization system [I... 77.8 5e-13
gi|226362356|ref|YP_002780134.1| hypothetical protein ROP_29420 ... 77.4 6e-13
gi|291006970|ref|ZP_06564943.1| hypothetical protein SeryN2_2082... 72.8 1e-11
gi|126675445|gb|ABO26359.1| TalB [Leifsonia xyli subsp. cynodontis] 71.2 5e-11
gi|336319417|ref|YP_004599385.1| plasmid stabilization system [C... 70.9 7e-11
gi|158314165|ref|YP_001506673.1| plasmid stabilization system pr... 70.5 8e-11
gi|86741370|ref|YP_481770.1| plasmid stabilization system protei... 69.3 2e-10
gi|119716905|ref|YP_923870.1| plasmid stabilization system prote... 65.5 2e-09
gi|83699621|gb|ABC40717.1| toxin fusion protein [Leifsonia xyli ... 64.7 5e-09
gi|326382749|ref|ZP_08204439.1| plasmid stabilization system [Go... 64.3 6e-09
gi|111221241|ref|YP_712035.1| hypothetical protein FRAAL1798 [Fr... 64.3 6e-09
gi|336176490|ref|YP_004581865.1| plasmid stabilization system [F... 62.4 2e-08
gi|336178440|ref|YP_004583815.1| hypothetical protein FsymDg_253... 59.7 1e-07
gi|288921921|ref|ZP_06416133.1| hypothetical protein FrEUN1fDRAF... 58.9 2e-07
gi|158313686|ref|YP_001506194.1| plasmid stabilization system pr... 58.5 3e-07
gi|333917555|ref|YP_004483505.1| hypothetical protein AS9A_P1002... 55.5 2e-06
gi|86741750|ref|YP_482150.1| hypothetical protein Francci3_3064 ... 54.7 5e-06
gi|111224446|ref|YP_715240.1| hypothetical protein FRAAL5060 [Fr... 54.3 7e-06
gi|145223796|ref|YP_001134474.1| hypothetical protein Mflv_3209 ... 52.8 2e-05
gi|147669679|ref|YP_001214497.1| addiction module antitoxin [Deh... 52.0 3e-05
gi|42526248|ref|NP_971346.1| hypothetical protein TDE0735 [Trepo... 51.6 4e-05
gi|78778160|ref|YP_394475.1| addiction module toxin, RelE/StbE [... 51.6 4e-05
gi|158341322|ref|YP_001522314.1| plasmid stability protein, puta... 51.2 5e-05
gi|254499234|ref|ZP_05111912.1| RelE toxin [Legionella drancourt... 51.2 6e-05
gi|99034986|ref|ZP_01314787.1| hypothetical protein Wendoof_0100... 50.8 6e-05
gi|190571702|ref|YP_001976060.1| Putative phage related protein ... 50.4 8e-05
gi|260890783|ref|ZP_05902046.1| toxin-antitoxin system, toxin co... 50.1 1e-04
gi|46205408|ref|ZP_00209851.1| COG2026: Cytotoxic translational ... 50.1 1e-04
gi|307700471|ref|ZP_07637509.1| toxin-antitoxin system, toxin co... 50.1 1e-04
gi|297562519|ref|YP_003681493.1| hypothetical protein Ndas_3586 ... 49.3 2e-04
>gi|15840691|ref|NP_335728.1| hypothetical protein MT1284 [Mycobacterium tuberculosis CDC1551]
gi|13880879|gb|AAK45542.1| hypothetical protein MT1284 [Mycobacterium tuberculosis CDC1551]
Length=143
Score = 199 bits (507), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%)
Query 1 VSDDHPYHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSAR 60
VSDDHPYHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSAR
Sbjct 47 VSDDHPYHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSAR 106
Query 61 RGDYRVVYAIDDGHHRVEIIHIARRSASYRMNPCRPR 97
RGDYRVVYAIDDGHHRVEIIHIARRSASYRMNPCRPR
Sbjct 107 RGDYRVVYAIDDGHHRVEIIHIARRSASYRMNPCRPR 143
>gi|15608386|ref|NP_215762.1| hypothetical protein Rv1246c [Mycobacterium tuberculosis H37Rv]
gi|31792439|ref|NP_854932.1| hypothetical protein Mb1278c [Mycobacterium bovis AF2122/97]
gi|121637175|ref|YP_977398.1| hypothetical protein BCG_1306c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
67 more sequence titles
Length=97
Score = 197 bits (501), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 96/97 (99%), Positives = 97/97 (100%), Gaps = 0/97 (0%)
Query 1 VSDDHPYHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSAR 60
+SDDHPYHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSAR
Sbjct 1 MSDDHPYHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSAR 60
Query 61 RGDYRVVYAIDDGHHRVEIIHIARRSASYRMNPCRPR 97
RGDYRVVYAIDDGHHRVEIIHIARRSASYRMNPCRPR
Sbjct 61 RGDYRVVYAIDDGHHRVEIIHIARRSASYRMNPCRPR 97
>gi|308373088|ref|ZP_07430958.2| toxin [Mycobacterium tuberculosis SUMu005]
gi|308374265|ref|ZP_07435364.2| toxin [Mycobacterium tuberculosis SUMu006]
gi|308377675|ref|ZP_07479992.2| toxin [Mycobacterium tuberculosis SUMu009]
gi|308380022|ref|ZP_07488407.2| toxin [Mycobacterium tuberculosis SUMu011]
gi|308338826|gb|EFP27677.1| toxin [Mycobacterium tuberculosis SUMu005]
gi|308342511|gb|EFP31362.1| toxin [Mycobacterium tuberculosis SUMu006]
gi|308354947|gb|EFP43798.1| toxin [Mycobacterium tuberculosis SUMu009]
gi|308362857|gb|EFP51708.1| toxin [Mycobacterium tuberculosis SUMu011]
Length=89
Score = 180 bits (457), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 88/89 (99%), Positives = 89/89 (100%), Gaps = 0/89 (0%)
Query 9 VAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYRVVY 68
+AITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYRVVY
Sbjct 1 MAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYRVVY 60
Query 69 AIDDGHHRVEIIHIARRSASYRMNPCRPR 97
AIDDGHHRVEIIHIARRSASYRMNPCRPR
Sbjct 61 AIDDGHHRVEIIHIARRSASYRMNPCRPR 89
>gi|343928187|ref|ZP_08767642.1| hypothetical protein GOALK_110_00280 [Gordonia alkanivorans NBRC
16433]
gi|343761885|dbj|GAA14568.1| hypothetical protein GOALK_110_00280 [Gordonia alkanivorans NBRC
16433]
Length=96
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/85 (58%), Positives = 62/85 (73%), Gaps = 0/85 (0%)
Query 6 PYHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYR 65
PY V + + A RDLQRLP +I A +EF+ GPL NPHRL KPLR+DL GLHSARRGDYR
Sbjct 11 PYRVEVASPARRDLQRLPSRIVHAVIEFISGPLAENPHRLSKPLRDDLGGLHSARRGDYR 70
Query 66 VVYAIDDGHHRVEIIHIARRSASYR 90
V+ IDD +H + ++ I R+ +YR
Sbjct 71 VLLRIDDPNHTIVVVRIDHRAHAYR 95
>gi|262202560|ref|YP_003273768.1| plasmid stabilization system [Gordonia bronchialis DSM 43247]
gi|262085907|gb|ACY21875.1| plasmid stabilization system [Gordonia bronchialis DSM 43247]
Length=96
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/85 (56%), Positives = 61/85 (72%), Gaps = 0/85 (0%)
Query 6 PYHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYR 65
PY V + + A RDLQRLP +I A +EF+ GPL NPHRL KPLR+DL GLHSARRGDYR
Sbjct 11 PYRVEVASPARRDLQRLPSRIVHAVIEFISGPLAGNPHRLSKPLRDDLGGLHSARRGDYR 70
Query 66 VVYAIDDGHHRVEIIHIARRSASYR 90
++ ID +H + ++ I R+ +YR
Sbjct 71 ILLRIDAPNHTIVVVRIDHRAHAYR 95
>gi|296137985|ref|YP_003645228.1| plasmid stabilization system [Tsukamurella paurometabola DSM
20162]
gi|296026119|gb|ADG76889.1| plasmid stabilization system [Tsukamurella paurometabola DSM
20162]
Length=97
Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/86 (56%), Positives = 59/86 (69%), Gaps = 0/86 (0%)
Query 5 HPYHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDY 64
H Y +A A R L+RLP K+AAA VEF+ GPL +NPHRL KPLRN+ +G SARRGDY
Sbjct 10 HLYEIAAGPAARRALRRLPTKVAAAIVEFITGPLADNPHRLSKPLRNEYDGYRSARRGDY 69
Query 65 RVVYAIDDGHHRVEIIHIARRSASYR 90
RV+ +D+ RV II I R+ YR
Sbjct 70 RVLLRVDNSTRRVLIIDIDHRAHIYR 95
>gi|315443134|ref|YP_004076013.1| cytotoxic translational repressor of toxin-antitoxin stability
system [Mycobacterium sp. Spyr1]
gi|315261437|gb|ADT98178.1| cytotoxic translational repressor of toxin-antitoxin stability
system [Mycobacterium sp. Spyr1]
Length=87
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/85 (53%), Positives = 59/85 (70%), Gaps = 1/85 (1%)
Query 7 YHVAITATAARDL-QRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYR 65
Y V ++ A R L ++LPE +AAAC F++GPL NP R+GK LRN+L G +SARRG++R
Sbjct 3 YVVVLSPGARRALTEQLPEAVAAACFAFIYGPLAENPRRVGKQLRNELAGTYSARRGEFR 62
Query 66 VVYAIDDGHHRVEIIHIARRSASYR 90
V+Y IDD RVE+I I R YR
Sbjct 63 VIYDIDDNRIRVEVISIRHRRDVYR 87
>gi|226887833|pdb|3G5O|B Chain B, The Crystal Structure Of The Toxin-Antitoxin Complex
Relbe2 (Rv2865-2866) From Mycobacterium Tuberculosis
gi|226887834|pdb|3G5O|C Chain C, The Crystal Structure Of The Toxin-Antitoxin Complex
Relbe2 (Rv2865-2866) From Mycobacterium Tuberculosis
Length=102
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/85 (55%), Positives = 55/85 (65%), Gaps = 0/85 (0%)
Query 6 PYHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYR 65
PY V T TA RDL +LP +I AA VEF FG L P R+GKPLR +L G SARRG YR
Sbjct 17 PYTVRFTTTARRDLHKLPPRILAAVVEFAFGDLSREPLRVGKPLRRELAGTFSARRGTYR 76
Query 66 VVYAIDDGHHRVEIIHIARRSASYR 90
++Y IDD H V I+ + R+ YR
Sbjct 77 LLYRIDDEHTTVVILRVDHRADIYR 101
>gi|15610003|ref|NP_217382.1| hypothetical protein Rv2866 [Mycobacterium tuberculosis H37Rv]
gi|31794043|ref|NP_856536.1| hypothetical protein Mb2891 [Mycobacterium bovis AF2122/97]
gi|121638748|ref|YP_978972.1| hypothetical protein BCG_2888 [Mycobacterium bovis BCG str. Pasteur
1173P2]
72 more sequence titles
Length=87
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/85 (55%), Positives = 55/85 (65%), Gaps = 0/85 (0%)
Query 6 PYHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYR 65
PY V T TA RDL +LP +I AA VEF FG L P R+GKPLR +L G SARRG YR
Sbjct 2 PYTVRFTTTARRDLHKLPPRILAAVVEFAFGDLSREPLRVGKPLRRELAGTFSARRGTYR 61
Query 66 VVYAIDDGHHRVEIIHIARRSASYR 90
++Y IDD H V I+ + R+ YR
Sbjct 62 LLYRIDDEHTTVVILRVDHRADIYR 86
>gi|333990698|ref|YP_004523312.1| hypothetical protein JDM601_2058 [Mycobacterium sp. JDM601]
gi|333486666|gb|AEF36058.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=87
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/84 (52%), Positives = 57/84 (68%), Gaps = 0/84 (0%)
Query 7 YHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYRV 66
Y V T+TA RDL +LP ++ +A +EF FG L + PHR+GKPLR +L GL+SARRG YR+
Sbjct 3 YTVRFTSTARRDLHKLPPRVLSAVIEFAFGDLAHEPHRVGKPLRRELTGLYSARRGPYRL 62
Query 67 VYAIDDGHHRVEIIHIARRSASYR 90
+Y ID G V I + R+ YR
Sbjct 63 LYRIDQGRSLVPIQRVDHRADVYR 86
>gi|317126592|ref|YP_004100704.1| plasmid stabilization system [Intrasporangium calvum DSM 43043]
gi|315590680|gb|ADU49977.1| plasmid stabilization system [Intrasporangium calvum DSM 43043]
Length=92
Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/89 (48%), Positives = 60/89 (68%), Gaps = 1/89 (1%)
Query 3 DDHPYHVAITATAARDLQR-LPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARR 61
+ PY + +T A R ++ LPE +AAA +EF+ G L+ NPHR+GKPLR +L G+HSARR
Sbjct 2 SEEPYELVLTPPAVRAVRSGLPEAVAAAVIEFLTGALIQNPHRVGKPLRGELAGIHSARR 61
Query 62 GDYRVVYAIDDGHHRVEIIHIARRSASYR 90
G YRV+Y I++ V ++ I R +YR
Sbjct 62 GTYRVLYRINEIQGEVVVLRIDHRRDAYR 90
>gi|284042315|ref|YP_003392655.1| plasmid stabilization system [Conexibacter woesei DSM 14684]
gi|283946536|gb|ADB49280.1| plasmid stabilization system [Conexibacter woesei DSM 14684]
Length=91
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/90 (46%), Positives = 59/90 (66%), Gaps = 1/90 (1%)
Query 1 VSDDHPYHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSAR 60
+S+ P+ + + AARD+QRLPEK A A VE + NP RLGKPLR +L+G SA
Sbjct 1 MSEQEPWRLTVAGPAARDIQRLPEKYATAIVE-ALAHIAENPRRLGKPLRLELDGHWSAG 59
Query 61 RGDYRVVYAIDDGHHRVEIIHIARRSASYR 90
RG YR++Y +DD V+++ +A R+ +YR
Sbjct 60 RGPYRIIYTLDDAERTVQVVAVAHRADAYR 89
>gi|312195903|ref|YP_004015964.1| plasmid stabilization system [Frankia sp. EuI1c]
gi|311227239|gb|ADP80094.1| plasmid stabilization system [Frankia sp. EuI1c]
Length=90
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/84 (49%), Positives = 56/84 (67%), Gaps = 0/84 (0%)
Query 7 YHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYRV 66
+ V TA A RDL ++P ++ A VEF FG L + P R+GKPL +L G+ SARRG YRV
Sbjct 3 HQVVFTARAQRDLDQVPPRVVPAIVEFAFGDLADGPRRVGKPLDRELTGILSARRGPYRV 62
Query 67 VYAIDDGHHRVEIIHIARRSASYR 90
+Y +DD RV I+ +A R+ +YR
Sbjct 63 LYRVDDDKKRVTILRVAHRADAYR 86
>gi|167969495|ref|ZP_02551772.1| hypothetical protein MtubH3_16301 [Mycobacterium tuberculosis
H37Ra]
gi|289746666|ref|ZP_06506044.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289754979|ref|ZP_06514357.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289687194|gb|EFD54682.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289695566|gb|EFD62995.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=83
Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/80 (54%), Positives = 52/80 (65%), Gaps = 0/80 (0%)
Query 11 ITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYRVVYAI 70
T TA RDL +LP +I AA VEF FG L P R+GKPLR +L G SARRG YR++Y I
Sbjct 3 FTTTARRDLHKLPPRILAAVVEFAFGDLSREPLRVGKPLRRELAGTFSARRGTYRLLYRI 62
Query 71 DDGHHRVEIIHIARRSASYR 90
DD H V I+ + R+ YR
Sbjct 63 DDEHTTVVILRVDHRADIYR 82
>gi|284990456|ref|YP_003409010.1| plasmid stabilization system [Geodermatophilus obscurus DSM 43160]
gi|284063701|gb|ADB74639.1| plasmid stabilization system [Geodermatophilus obscurus DSM 43160]
Length=91
Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 58/82 (71%), Gaps = 1/82 (1%)
Query 9 VAITATAARDLQR-LPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYRVV 67
V ++A A R ++R LPE +A A V+F++GPL +P+R+GKPLR DLEG SARRG YRV+
Sbjct 9 VVLSAAAKRAIERDLPEPVAVAVVDFLYGPLAADPYRVGKPLRFDLEGYWSARRGQYRVI 68
Query 68 YAIDDGHHRVEIIHIARRSASY 89
Y+I D V ++ I+ R+ Y
Sbjct 69 YSIHDNEVLVRVVRISHRADVY 90
>gi|271969006|ref|YP_003343202.1| hypothetical protein Sros_7793 [Streptosporangium roseum DSM
43021]
gi|270512181|gb|ACZ90459.1| toxin-like protein [Streptosporangium roseum DSM 43021]
Length=91
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/85 (50%), Positives = 57/85 (68%), Gaps = 1/85 (1%)
Query 7 YHVAITATAARDL-QRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYR 65
Y + +T A +DL +RLP K+ A EF+ GPLL+NP R+GKPL L SARRGDYR
Sbjct 5 YELHLTRRARQDLAERLPAKVVRAVWEFITGPLLDNPRRVGKPLDEPLAPQWSARRGDYR 64
Query 66 VVYAIDDGHHRVEIIHIARRSASYR 90
V+Y IDDG V+++ + R+ +YR
Sbjct 65 VLYLIDDGRILVQVVTVQHRADAYR 89
>gi|323358565|ref|YP_004224961.1| cytotoxic translational repressor of toxin-antitoxin stability
system [Microbacterium testaceum StLB037]
gi|323274936|dbj|BAJ75081.1| cytotoxic translational repressor of toxin-antitoxin stability
system [Microbacterium testaceum StLB037]
Length=90
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/85 (55%), Positives = 54/85 (64%), Gaps = 1/85 (1%)
Query 7 YHVAITATAARDL-QRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYR 65
Y V + A R L Q LPEK+AAA EF+ G L NP R+GKPLR L LHSARRGDYR
Sbjct 5 YEVVFSRAARRALEQDLPEKVAAAAFEFIAGALRANPRRVGKPLREPLAPLHSARRGDYR 64
Query 66 VVYAIDDGHHRVEIIHIARRSASYR 90
V+Y I D +EI+ I R +YR
Sbjct 65 VLYRIVDHRLVIEIVSIVHRRDAYR 89
>gi|50955753|ref|YP_063041.1| hypothetical protein Lxx22677 [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50952235|gb|AAT89936.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length=88
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/84 (47%), Positives = 54/84 (65%), Gaps = 0/84 (0%)
Query 7 YHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYRV 66
+ V A R L RLP ++ AA VEFV L NP+R+ KPL+ DLEG +SARRGDYRV
Sbjct 3 WDVQFAPAAIRGLDRLPPRVVAAVVEFVTVTLPGNPYRMSKPLQGDLEGYYSARRGDYRV 62
Query 67 VYAIDDGHHRVEIIHIARRSASYR 90
++++D+ + + IA R+ YR
Sbjct 63 LFSLDEDRRVLLVGRIAHRADVYR 86
>gi|336179276|ref|YP_004584651.1| plasmid stabilization system [Frankia symbiont of Datisca glomerata]
gi|334860256|gb|AEH10730.1| plasmid stabilization system [Frankia symbiont of Datisca glomerata]
Length=96
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/91 (51%), Positives = 58/91 (64%), Gaps = 2/91 (2%)
Query 2 SDDHPYHVAITATAARDL-QRLPEKIAAACVEFVFGPLLNNPHRLG-KPLRNDLEGLHSA 59
+ + P+ + IT AAR L RLPEKIAAA EFV LL+NPHRLG + L EG SA
Sbjct 4 TGEQPFELRITGPAARALASRLPEKIAAAVHEFVTTTLLDNPHRLGRRLLLPPYEGTWSA 63
Query 60 RRGDYRVVYAIDDGHHRVEIIHIARRSASYR 90
RRG YRV+Y ID+ + V + + RS +YR
Sbjct 64 RRGSYRVLYEIDEDNRIVTVTAVEHRSDAYR 94
>gi|336178296|ref|YP_004583671.1| plasmid stabilization system [Frankia symbiont of Datisca glomerata]
gi|334859276|gb|AEH09750.1| plasmid stabilization system [Frankia symbiont of Datisca glomerata]
Length=73
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/72 (53%), Positives = 51/72 (71%), Gaps = 0/72 (0%)
Query 19 LQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYRVVYAIDDGHHRVE 78
++RLPEK+A A VEF++ L NPHR+GKPL+ L GL+SARRGDYRV I+ H V+
Sbjct 1 MRRLPEKVATAVVEFLYRSLAANPHRVGKPLQLQLAGLYSARRGDYRVACRINTDDHHVD 60
Query 79 IIHIARRSASYR 90
++ I R+ YR
Sbjct 61 VVAIEHRADLYR 72
>gi|317125200|ref|YP_004099312.1| plasmid stabilization system [Intrasporangium calvum DSM 43043]
gi|315589288|gb|ADU48585.1| plasmid stabilization system [Intrasporangium calvum DSM 43043]
Length=91
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/85 (48%), Positives = 53/85 (63%), Gaps = 1/85 (1%)
Query 7 YHVAITATAARDL-QRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYR 65
Y + I ++A R + + LPE +A A EF+ GPLL NPHR+GK LR L HSARRG YR
Sbjct 6 YQLRIVSSARRHMTEDLPEAVATAAFEFITGPLLENPHRVGKQLRPPLTDRHSARRGTYR 65
Query 66 VVYAIDDGHHRVEIIHIARRSASYR 90
++Y ID+ V ++ I R YR
Sbjct 66 ILYRIDEQAQTVTVLAIGHRGDIYR 90
>gi|226362356|ref|YP_002780134.1| hypothetical protein ROP_29420 [Rhodococcus opacus B4]
gi|226240841|dbj|BAH51189.1| hypothetical protein [Rhodococcus opacus B4]
Length=95
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/87 (49%), Positives = 56/87 (65%), Gaps = 1/87 (1%)
Query 7 YHVAITATAARDL-QRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYR 65
Y + I TA R L Q LPE +A A +F+ GPLL+NP R+GK L+ L+ HSARRG YR
Sbjct 8 YTLVIAPTARRQLAQHLPEAVAFAAHKFIVGPLLDNPKRVGKRLQPPLDDRHSARRGTYR 67
Query 66 VVYAIDDGHHRVEIIHIARRSASYRMN 92
V+Y I+D V ++ IA R +YR +
Sbjct 68 VIYRINDEQRIVTVVDIAHRRDAYRTS 94
>gi|291006970|ref|ZP_06564943.1| hypothetical protein SeryN2_20823 [Saccharopolyspora erythraea
NRRL 2338]
Length=92
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/84 (45%), Positives = 52/84 (62%), Gaps = 0/84 (0%)
Query 7 YHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYRV 66
Y ++ TA A R + RLP A A + + GP+ +NPHRLGK L E LHS RRG+YR
Sbjct 7 YTISYTAAARRQMNRLPLAAAMAMHDHLTGPVADNPHRLGKRLDAPFEELHSTRRGEYRA 66
Query 67 VYAIDDGHHRVEIIHIARRSASYR 90
+Y+I+D V ++ +A R +YR
Sbjct 67 LYSINDEQILVTVVTVAHRRDAYR 90
>gi|126675445|gb|ABO26359.1| TalB [Leifsonia xyli subsp. cynodontis]
Length=92
Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/88 (41%), Positives = 54/88 (62%), Gaps = 1/88 (1%)
Query 4 DHPYHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRG- 62
D Y + ++ +A R L RLPEK+A A + F+ GPL NP R+ KPL +L+ + S G
Sbjct 3 DQSYRIEVSGSAMRALSRLPEKMADAVLRFLDGPLTENPMRVTKPLGAELDSMRSGYVGI 62
Query 63 DYRVVYAIDDGHHRVEIIHIARRSASYR 90
YRV+ ID+ V+++ IA R+ +YR
Sbjct 63 AYRVLVRIDEDKRVVQVMRIAHRADAYR 90
>gi|336319417|ref|YP_004599385.1| plasmid stabilization system [Cellvibrio gilvus ATCC 13127]
gi|336102998|gb|AEI10817.1| plasmid stabilization system [Cellvibrio gilvus ATCC 13127]
Length=89
Score = 70.9 bits (172), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/85 (49%), Positives = 58/85 (69%), Gaps = 1/85 (1%)
Query 7 YHVAITATAARDL-QRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYR 65
Y + ++ +AAR + + LP AAA VEF+FG L NP R+G PLR +L+G SARRG+YR
Sbjct 3 YRIVLSRSAARAVHESLPPHAAAAAVEFIFGALATNPRRVGHPLRTELDGHWSARRGEYR 62
Query 66 VVYAIDDGHHRVEIIHIARRSASYR 90
V+Y IDD V ++ +A R+ +YR
Sbjct 63 VIYTIDDDRVVVRVVLVAHRADAYR 87
>gi|158314165|ref|YP_001506673.1| plasmid stabilization system protein [Frankia sp. EAN1pec]
gi|158109570|gb|ABW11767.1| plasmid stabilization system [Frankia sp. EAN1pec]
Length=93
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/87 (45%), Positives = 54/87 (63%), Gaps = 1/87 (1%)
Query 6 PYHVAITATAARDL-QRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDY 64
PY VA++ A R+L + LP ++AAA +E + + NPHR+GKPL +G +SARRG Y
Sbjct 7 PYEVALSRRARRNLHEDLPLEVAAAALETIQRAIAMNPHRVGKPLDEPFDGFYSARRGTY 66
Query 65 RVVYAIDDGHHRVEIIHIARRSASYRM 91
R++Y ID H VEI I R Y +
Sbjct 67 RIIYRIDAAKHPVEIHSIRHRRDIYHL 93
>gi|86741370|ref|YP_481770.1| plasmid stabilization system protein [Frankia sp. CcI3]
gi|86568232|gb|ABD12041.1| plasmid stabilization system [Frankia sp. CcI3]
Length=95
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/87 (49%), Positives = 53/87 (61%), Gaps = 2/87 (2%)
Query 6 PYHVAITATAARDLQ-RLPEKIAAACVEFVFGPLLNNPHRLGKPLRN-DLEGLHSARRGD 63
PY + IT AAR L R+PEK+A A EF+ LL NPHRLGK L G SARRG
Sbjct 7 PYRLEITGPAARALAGRIPEKVATAVHEFITTTLLENPHRLGKRLLYPPYAGTWSARRGM 66
Query 64 YRVVYAIDDGHHRVEIIHIARRSASYR 90
YRV+Y ID+ + V + + R+ +YR
Sbjct 67 YRVLYEIDEENRIVLVTAVEHRADAYR 93
>gi|119716905|ref|YP_923870.1| plasmid stabilization system protein [Nocardioides sp. JS614]
gi|119537566|gb|ABL82183.1| plasmid stabilization system [Nocardioides sp. JS614]
Length=98
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/84 (45%), Positives = 48/84 (58%), Gaps = 1/84 (1%)
Query 7 YHVAITATAARDLQR-LPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYR 65
Y V T A R L+ LP +A A EF+ GPL P R+GKPL L L SARRG+YR
Sbjct 11 YEVVFTRGARRALEWDLPAAVAMAAFEFIRGPLREAPRRVGKPLLEPLTPLWSARRGEYR 70
Query 66 VVYAIDDGHHRVEIIHIARRSASY 89
++Y I D + ++ IA R +Y
Sbjct 71 ILYRILDRRLVIAVVTIAHRRDAY 94
>gi|83699621|gb|ABC40717.1| toxin fusion protein [Leifsonia xyli subsp. cynodontis]
Length=94
Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/79 (41%), Positives = 47/79 (60%), Gaps = 1/79 (1%)
Query 4 DHPYHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRG- 62
D Y + ++ +A R L RLPEK+A A + F+ GPL NP R+ KPL +L+ + S G
Sbjct 3 DQSYRIEVSGSAMRALSRLPEKMADAVLRFLDGPLTENPMRVTKPLGAELDSMRSGYVGI 62
Query 63 DYRVVYAIDDGHHRVEIIH 81
YRV+ ID+ V++I
Sbjct 63 AYRVLVRIDEDKRVVQVIS 81
>gi|326382749|ref|ZP_08204439.1| plasmid stabilization system [Gordonia neofelifaecis NRRL B-59395]
gi|326198339|gb|EGD55523.1| plasmid stabilization system [Gordonia neofelifaecis NRRL B-59395]
Length=62
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/61 (53%), Positives = 41/61 (68%), Gaps = 0/61 (0%)
Query 30 CVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYRVVYAIDDGHHRVEIIHIARRSASY 89
V+F+ PL NP+RL KPLR +LEG SARRGDYRV+ ID+ H + I+ I R+ Y
Sbjct 1 MVQFIAEPLAENPYRLSKPLRFELEGTRSARRGDYRVLLRIDEPKHIIVILDINHRAHVY 60
Query 90 R 90
R
Sbjct 61 R 61
>gi|111221241|ref|YP_712035.1| hypothetical protein FRAAL1798 [Frankia alni ACN14a]
gi|111148773|emb|CAJ60450.1| conserved hypothetical protein [Frankia alni ACN14a]
Length=80
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/66 (46%), Positives = 42/66 (64%), Gaps = 0/66 (0%)
Query 20 QRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYRVVYAIDDGHHRVEI 79
+RLP+ +AAA EF+ PL+ PHR+GK L L+ SARRG YR++Y +DD V +
Sbjct 9 ERLPQAVAAAAYEFITSPLVQAPHRVGKRLMPPLDDRFSARRGTYRIIYRVDDAARTVAV 68
Query 80 IHIARR 85
+ I R
Sbjct 69 VDIDHR 74
>gi|336176490|ref|YP_004581865.1| plasmid stabilization system [Frankia symbiont of Datisca glomerata]
gi|334857470|gb|AEH07944.1| plasmid stabilization system [Frankia symbiont of Datisca glomerata]
Length=90
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (57%), Positives = 37/57 (65%), Gaps = 0/57 (0%)
Query 33 FVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYRVVYAIDDGHHRVEIIHIARRSASY 89
FV GPLL+ PHR+GKPL L L SARRG YRV+Y ID H VE+ I R +Y
Sbjct 32 FVTGPLLDAPHRVGKPLDPPLAPLWSARRGPYRVIYLIDGTKHVVEVTAIRHRRDAY 88
>gi|336178440|ref|YP_004583815.1| hypothetical protein FsymDg_2530 [Frankia symbiont of Datisca
glomerata]
gi|334859420|gb|AEH09894.1| hypothetical protein FsymDg_2530 [Frankia symbiont of Datisca
glomerata]
Length=108
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/79 (36%), Positives = 43/79 (55%), Gaps = 0/79 (0%)
Query 7 YHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYRV 66
+ V + A+A RDLQRLP++ A F+ GPL N+P R G PL + A +R+
Sbjct 22 HEVTVAASAERDLQRLPDRTAGEIRRFLGGPLRNDPRRAGTPLSESRSTMWEATGPSWRI 81
Query 67 VYAIDDGHHRVEIIHIARR 85
+Y +D V ++ +A R
Sbjct 82 LYQVDANTLSVRVMVVAHR 100
>gi|288921921|ref|ZP_06416133.1| hypothetical protein FrEUN1fDRAFT_5831 [Frankia sp. EUN1f]
gi|288346724|gb|EFC81041.1| hypothetical protein FrEUN1fDRAFT_5831 [Frankia sp. EUN1f]
Length=101
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (32%), Positives = 51/89 (58%), Gaps = 1/89 (1%)
Query 4 DHPYHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLE-GLHSARRG 62
D+ + V ++++A RDL +LPE + A F+ GPL N+P + G PL + + G+ A
Sbjct 3 DNKHEVTLSSSAERDLAKLPELLGAEVRRFLDGPLRNDPRKAGTPLVGEQQVGMFEAAAR 62
Query 63 DYRVVYAIDDGHHRVEIIHIARRSASYRM 91
+R++Y +D V ++ + RR + R+
Sbjct 63 SWRMLYRVDANTRTVRVMVVGRRQSPSRL 91
>gi|158313686|ref|YP_001506194.1| plasmid stabilization system protein [Frankia sp. EAN1pec]
gi|158109091|gb|ABW11288.1| plasmid stabilization system [Frankia sp. EAN1pec]
Length=92
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/93 (34%), Positives = 52/93 (56%), Gaps = 3/93 (3%)
Query 1 VSDDHPYHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLE-GLHSA 59
+SD H V ++ +A RDL +LPE ++A F+ GPL N+P + G PL + + G+ A
Sbjct 1 MSDKH--EVTLSPSAERDLAKLPELLSAEVRRFLDGPLRNDPRKAGTPLAGESQVGMFEA 58
Query 60 RRGDYRVVYAIDDGHHRVEIIHIARRSASYRMN 92
+RV+Y +D V ++ + RR R++
Sbjct 59 TGRGWRVLYRVDANTRMVRVMIVGRRQTPSRLS 91
>gi|333917555|ref|YP_004483505.1| hypothetical protein AS9A_P10026 [Amycolicicoccus subflavus DQS3-9A1]
gi|333484484|gb|AEF43043.1| hypothetical protein AS9A_P10026 [Amycolicicoccus subflavus DQS3-9A1]
Length=101
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/86 (40%), Positives = 48/86 (56%), Gaps = 1/86 (1%)
Query 5 HPYHVAITATAARDL-QRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGD 63
PY + + A R L + LP + A A E + G LL +P R+GK L L L+SARRG+
Sbjct 14 QPYTLTLRRPARRALAEELPLEAAMAVGELLSGDLLTSPRRVGKRLYPPLNHLYSARRGE 73
Query 64 YRVVYAIDDGHHRVEIIHIARRSASY 89
YR++Y I+D V + I R +Y
Sbjct 74 YRILYEINDHTRTVTVASIRHRRDAY 99
>gi|86741750|ref|YP_482150.1| hypothetical protein Francci3_3064 [Frankia sp. CcI3]
gi|86568612|gb|ABD12421.1| conserved hypothetical protein [Frankia sp. CcI3]
Length=105
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (32%), Positives = 49/94 (53%), Gaps = 2/94 (2%)
Query 1 VSDDHPYHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSAR 60
+SD H V ++A+A RDL +L E F+ G L ++P + G P+ + G+H A
Sbjct 1 MSDKH--EVTLSASAERDLSKLAELTRGEVRRFLDGALRDDPRKAGTPIPGEQVGMHEAS 58
Query 61 RGDYRVVYAIDDGHHRVEIIHIARRSASYRMNPC 94
+R++Y ID V ++ +A R A R+ P
Sbjct 59 GRTWRILYRIDANTRSVRVMVVAPRGARSRIVPT 92
>gi|111224446|ref|YP_715240.1| hypothetical protein FRAAL5060 [Frankia alni ACN14a]
gi|111151978|emb|CAJ63700.1| hypothetical protein FRAAL5060 [Frankia alni ACN14a]
Length=105
Score = 54.3 bits (129), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/94 (31%), Positives = 49/94 (53%), Gaps = 2/94 (2%)
Query 1 VSDDHPYHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSAR 60
+SD H V ++A+A RDL +L E F+ G L ++P + G P+ + G+H A
Sbjct 1 MSDKH--EVTLSASAERDLAKLAELTRGEVRRFLDGKLRDDPRKAGTPIPGEQVGMHEAS 58
Query 61 RGDYRVVYAIDDGHHRVEIIHIARRSASYRMNPC 94
+R++Y ID V ++ +A R + R+ P
Sbjct 59 GRTWRILYRIDANTQTVRVMVVAPRGSRTRIVPT 92
>gi|145223796|ref|YP_001134474.1| hypothetical protein Mflv_3209 [Mycobacterium gilvum PYR-GCK]
gi|145216282|gb|ABP45686.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=63
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/61 (45%), Positives = 36/61 (60%), Gaps = 0/61 (0%)
Query 30 CVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYRVVYAIDDGHHRVEIIHIARRSASY 89
+EF+ L NPH+L +PLR +L G H ARRGDYRV + I + I I R+ +Y
Sbjct 1 MIEFITTTLPTNPHQLSRPLRYELTGWHVARRGDYRVTFRILGDDRVLLIGRIEHRAHAY 60
Query 90 R 90
R
Sbjct 61 R 61
>gi|147669679|ref|YP_001214497.1| addiction module antitoxin [Dehalococcoides sp. BAV1]
gi|146270627|gb|ABQ17619.1| addiction module toxin, RelE/StbE family [Dehalococcoides sp.
BAV1]
Length=85
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/85 (38%), Positives = 45/85 (53%), Gaps = 4/85 (4%)
Query 7 YHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLG-KPLRNDLEGLHSARRGDYR 65
Y + + A +DL +LP+K A +E + L N P G + L+ GL R+GDYR
Sbjct 2 YRIDLRRKAQQDLDKLPKKDFEAVIETI-KELANTPRPKGIEKLKG--SGLWRVRQGDYR 58
Query 66 VVYAIDDGHHRVEIIHIARRSASYR 90
+VY IDD +V I+ I R YR
Sbjct 59 IVYNIDDKQSQVIIVRIGNRRDIYR 83
>gi|42526248|ref|NP_971346.1| hypothetical protein TDE0735 [Treponema denticola ATCC 35405]
gi|41816360|gb|AAS11227.1| conserved hypothetical protein [Treponema denticola ATCC 35405]
Length=85
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/84 (35%), Positives = 45/84 (54%), Gaps = 1/84 (1%)
Query 8 HVAITATAARDLQRLPEKIAAACVEFVFG-PLLNNPHRLGKPLRNDLEGLHSARRGDYRV 66
V +T T + L++L I+ ++++ LL+NP GK L ++L GL R GDYR+
Sbjct 2 KVVLTETFKKQLKKLDATISKRVLDYLEQIELLDNPRSRGKALTSNLSGLWRYRVGDYRI 61
Query 67 VYAIDDGHHRVEIIHIARRSASYR 90
+ I D + +I I RS YR
Sbjct 62 LCRICDDKLIITVIEIGHRSTVYR 85
>gi|78778160|ref|YP_394475.1| addiction module toxin, RelE/StbE [Sulfurimonas denitrificans
DSM 1251]
gi|78498700|gb|ABB45240.1| Addiction module toxin, RelE/StbE [Sulfurimonas denitrificans
DSM 1251]
Length=85
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/84 (34%), Positives = 43/84 (52%), Gaps = 1/84 (1%)
Query 7 YHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYRV 66
Y + I +DL+++ + +E + L+ NPH LGKPL +L + R DYRV
Sbjct 3 YKLLIDDKVIKDLKQIDKLWQKKIIEVIKTKLVENPH-LGKPLVGNLSPYYRLRVFDYRV 61
Query 67 VYAIDDGHHRVEIIHIARRSASYR 90
+Y I+D V +I I R Y+
Sbjct 62 IYEINDDEVVVIVIKIGHRKDIYK 85
>gi|158341322|ref|YP_001522314.1| plasmid stability protein, putative [Acaryochloris marina MBIC11017]
gi|158311563|gb|ABW33174.1| plasmid stability protein, putative [Acaryochloris marina MBIC11017]
Length=88
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/84 (34%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query 7 YHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYRV 66
Y V + A R L++LP K+ A V + L ++PH G E L R+G YRV
Sbjct 3 YSVFLAPAAERQLKKLPNKVKAQIVP-ILKTLTDDPHPSGSAKLKGAEDLWKIRKGAYRV 61
Query 67 VYAIDDGHHRVEIIHIARRSASYR 90
+Y I D + +++IA R Y+
Sbjct 62 IYQIQDKKLTILVVNIAHRRDVYK 85
>gi|254499234|ref|ZP_05111912.1| RelE toxin [Legionella drancourtii LLAP12]
gi|254351548|gb|EET10405.1| RelE toxin [Legionella drancourtii LLAP12]
Length=88
Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/85 (29%), Positives = 42/85 (50%), Gaps = 2/85 (2%)
Query 7 YHVAITATAARDLQRLPEKIAAACVEFVFGPLL--NNPHRLGKPLRNDLEGLHSARRGDY 64
+ + +DL++L ++++ ++ +P GKPL +L GL R GDY
Sbjct 3 WKIEFDTDVEKDLKKLGHSAQKRVIKYLKEQVIPAEDPRSFGKPLSGNLSGLWRYRTGDY 62
Query 65 RVVYAIDDGHHRVEIIHIARRSASY 89
R++ I+D H + I+HI R Y
Sbjct 63 RIIAKIEDDHFIILIVHIGHRKNVY 87
>gi|99034986|ref|ZP_01314787.1| hypothetical protein Wendoof_01000378 [Wolbachia endosymbiont
of Drosophila willistoni TSC#14030-0811.24]
Length=93
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/86 (34%), Positives = 45/86 (53%), Gaps = 1/86 (1%)
Query 6 PYHVAITATA-ARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDY 64
PY++ + + +D+ LP K+ + + L +P LGKPL+++L G S R Y
Sbjct 7 PYNIDYSESVIKKDIPALPAKVKLMIKKAIMERLTVDPIGLGKPLKHNLSGQRSLRVSTY 66
Query 65 RVVYAIDDGHHRVEIIHIARRSASYR 90
R++Y ID H V I I R SY+
Sbjct 67 RILYYIDVPEHTVVITSIEHRKDSYQ 92
>gi|190571702|ref|YP_001976060.1| Putative phage related protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019834|ref|ZP_03335636.1| putative phage related protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357974|emb|CAQ55437.1| Putative phage related protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212994582|gb|EEB55228.1| putative phage related protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length=93
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/86 (34%), Positives = 45/86 (53%), Gaps = 1/86 (1%)
Query 6 PYHVAITATA-ARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDY 64
PY++ + + +D+ LP K+ + + L +P LGKPL+++L G S R Y
Sbjct 7 PYNIDYSESVIKKDIPALPAKVKLMIKKAIMERLTVDPIGLGKPLKHNLSGQRSLRVSTY 66
Query 65 RVVYAIDDGHHRVEIIHIARRSASYR 90
R++Y ID H V I I R SY+
Sbjct 67 RILYYIDVPEHTVVITAIEHRKDSYQ 92
>gi|260890783|ref|ZP_05902046.1| toxin-antitoxin system, toxin component, RelE family [Leptotrichia
hofstadii F0254]
gi|260859336|gb|EEX73836.1| toxin-antitoxin system, toxin component, RelE family [Leptotrichia
hofstadii F0254]
Length=108
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/84 (35%), Positives = 45/84 (54%), Gaps = 5/84 (5%)
Query 7 YHVAITATAARDLQRLPEK---IAAACVEFVFGPLLN--NPHRLGKPLRNDLEGLHSARR 61
Y V T +A +DL++L + IA +++ L+N NP + GK L +L+GL R
Sbjct 7 YEVKFTESAEKDLKKLSKTNKAIAKLLKKWILENLINTQNPKQRGKALTGNLKGLWRYRV 66
Query 62 GDYRVVYAIDDGHHRVEIIHIARR 85
G YR+V I D + I+ I+ R
Sbjct 67 GSYRIVAEIKDEVLLILIVEISDR 90
>gi|46205408|ref|ZP_00209851.1| COG2026: Cytotoxic translational repressor of toxin-antitoxin
stability system [Magnetospirillum magnetotacticum MS-1]
Length=92
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (35%), Positives = 49/88 (56%), Gaps = 1/88 (1%)
Query 4 DHPYHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRG- 62
D + V ++ AAR L +LP ++A A + F L +NP+R+ K L +L G + G
Sbjct 5 DGGWEVRLSPPAARMLYQLPPRLADAVIRFCDERLASNPYRVTKALGAELAGQRAGYVGI 64
Query 63 DYRVVYAIDDGHHRVEIIHIARRSASYR 90
+RV+ IDD V ++ +A R+ +YR
Sbjct 65 GFRVLVRIDDDQRLVTVMRMAYRADAYR 92
>gi|307700471|ref|ZP_07637509.1| toxin-antitoxin system, toxin component, RelE family [Mobiluncus
mulieris FB024-16]
gi|307614340|gb|EFN93571.1| toxin-antitoxin system, toxin component, RelE family [Mobiluncus
mulieris FB024-16]
Length=88
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/86 (40%), Positives = 45/86 (53%), Gaps = 3/86 (3%)
Query 7 YHVAITATAARDLQRLPEKIAAACVEFVFGPL--LNNPHRLGKPLRNDLEGLHSARRGDY 64
+ T A + L+++ +K AA VE L LN+P + GK L GL R GDY
Sbjct 3 WKTKYTGEAYKQLRKM-DKTAARRVESYVNELSSLNDPRQRGKALTGVFGGLWRYRVGDY 61
Query 65 RVVYAIDDGHHRVEIIHIARRSASYR 90
RV+ I DG V +I IA RS +YR
Sbjct 62 RVICKIIDGELTVIVIRIAHRSRAYR 87
>gi|297562519|ref|YP_003681493.1| hypothetical protein Ndas_3586 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296846967|gb|ADH68987.1| conserved hypothetical protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length=94
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/84 (35%), Positives = 43/84 (52%), Gaps = 1/84 (1%)
Query 7 YHVAITATAARDL-QRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYR 65
Y + + TA R L + LP+K+A A E + G L NP ++GK L ARR YR
Sbjct 5 YEIVLARTARRALSETLPDKVATAAWELIRGDLRENPRKVGKRLNPPYGQERVARRATYR 64
Query 66 VVYAIDDGHHRVEIIHIARRSASY 89
+ + IDD + + I R+ +Y
Sbjct 65 IRFGIDDDKGVIVVCDIRGRADAY 88
Lambda K H
0.325 0.140 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 130655526400
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40