BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1247c
Length=89
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608387|ref|NP_215763.1| hypothetical protein Rv1247c [Mycob... 175 2e-42
gi|296137984|ref|YP_003645227.1| prevent-host-death family prote... 84.0 8e-15
gi|340627858|ref|YP_004746310.1| hypothetical protein MCAN_28871... 82.0 3e-14
gi|333990699|ref|YP_004523313.1| hypothetical protein JDM601_205... 81.3 4e-14
gi|226887832|pdb|3G5O|A Chain A, The Crystal Structure Of The To... 81.3 4e-14
gi|15610002|ref|NP_217381.1| hypothetical protein Rv2865 [Mycoba... 80.9 5e-14
gi|326382748|ref|ZP_08204438.1| prevent-host-death family protei... 79.7 1e-13
gi|284042316|ref|YP_003392656.1| prevent-host-death family prote... 78.2 4e-13
gi|50955754|ref|YP_063042.1| hypothetical protein Lxx22678 [Leif... 77.8 5e-13
gi|262202561|ref|YP_003273769.1| prevent-host-death family prote... 77.0 9e-13
gi|312195904|ref|YP_004015965.1| prevent-host-death family prote... 74.7 4e-12
gi|336179277|ref|YP_004584652.1| prevent-host-death family prote... 74.7 4e-12
gi|343928186|ref|ZP_08767641.1| hypothetical protein GOALK_110_0... 74.7 5e-12
gi|86741369|ref|YP_481769.1| prevent-host-death protein [Frankia... 73.9 7e-12
gi|317126593|ref|YP_004100705.1| prevent-host-death family prote... 73.6 1e-11
gi|271969007|ref|YP_003343203.1| hypothetical protein Sros_7794 ... 71.2 4e-11
gi|323358564|ref|YP_004224960.1| antitoxin of toxin-antitoxin st... 71.2 4e-11
gi|336319416|ref|YP_004599384.1| prevent-host-death family prote... 70.1 1e-10
gi|315443133|ref|YP_004076012.1| prevent-host-death family prote... 69.3 2e-10
gi|297562520|ref|YP_003681494.1| prevent-host-death family prote... 68.2 4e-10
gi|126675444|gb|ABO26358.1| TalA [Leifsonia xyli subsp. cynodontis] 66.6 1e-09
gi|343928185|ref|ZP_08767640.1| hypothetical protein GOALK_110_0... 62.8 1e-08
gi|256371947|ref|YP_003109771.1| prevent-host-death family prote... 62.8 2e-08
gi|119716906|ref|YP_923871.1| prevent-host-death family protein ... 60.8 6e-08
gi|226362357|ref|YP_002780135.1| hypothetical protein ROP_29430 ... 60.8 6e-08
gi|317125201|ref|YP_004099313.1| prevent-host-death family prote... 60.1 1e-07
gi|23006087|ref|ZP_00048575.1| COG2161: Antitoxin of toxin-antit... 60.1 1e-07
gi|301057765|ref|ZP_07198834.1| toxin-antitoxin system, antitoxi... 59.3 2e-07
gi|269796007|ref|YP_003315462.1| prevent-host-death family prote... 58.9 2e-07
gi|284990457|ref|YP_003409011.1| prevent-host-death family prote... 58.2 5e-07
gi|312140751|ref|YP_004008087.1| hypothetical protein REQ_34130 ... 56.2 1e-06
gi|325675609|ref|ZP_08155293.1| prevent-host-death family antito... 56.2 2e-06
gi|258593421|emb|CBE69760.1| Prevent-host-death protein [NC10 ba... 55.8 2e-06
gi|291437271|ref|ZP_06576661.1| predicted protein [Streptomyces ... 54.3 6e-06
gi|302036727|ref|YP_003797049.1| antitoxin of toxin-antitoxin st... 52.8 2e-05
gi|334118310|ref|ZP_08492400.1| prevent-host-death family protei... 52.8 2e-05
gi|167762211|ref|ZP_02434338.1| hypothetical protein BACSTE_0056... 52.4 2e-05
gi|298530053|ref|ZP_07017455.1| prevent-host-death family protei... 52.4 2e-05
gi|218517196|ref|ZP_03514036.1| hypothetical protein Retl8_28475... 52.0 3e-05
gi|319956796|ref|YP_004168059.1| prevent-host-death family prote... 50.8 7e-05
gi|308274399|emb|CBX30998.1| hypothetical protein N47_E45100 [un... 50.4 9e-05
gi|307947051|ref|ZP_07662386.1| toxin-antitoxin system, antitoxi... 49.7 1e-04
gi|254389151|ref|ZP_05004380.1| hypothetical protein SSCG_01707 ... 49.7 1e-04
gi|254497691|ref|ZP_05110470.1| Prevent-host-death protein [Legi... 49.7 1e-04
gi|289664119|ref|ZP_06485700.1| hypothetical protein XcampvN_138... 49.7 1e-04
gi|212703231|ref|ZP_03311359.1| hypothetical protein DESPIG_0127... 49.7 2e-04
gi|30248721|ref|NP_840791.1| hypothetical protein NE0712 [Nitros... 49.3 2e-04
gi|227543351|ref|ZP_03973400.1| prevent-host-death family protei... 48.9 2e-04
gi|158522616|ref|YP_001530486.1| prevent-host-death family prote... 48.1 4e-04
gi|148263387|ref|YP_001230093.1| prevent-host-death family prote... 47.8 5e-04
>gi|15608387|ref|NP_215763.1| hypothetical protein Rv1247c [Mycobacterium tuberculosis H37Rv]
gi|31792440|ref|NP_854933.1| hypothetical protein Mb1279c [Mycobacterium bovis AF2122/97]
gi|121637176|ref|YP_977399.1| hypothetical protein BCG_1307c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
77 more sequence titles
Length=89
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/89 (100%), Positives = 89/89 (100%), Gaps = 0/89 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA
Sbjct 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
Query 61 SEAIREGLADVAAGRFVSNDEIRNRYTAR 89
SEAIREGLADVAAGRFVSNDEIRNRYTAR
Sbjct 61 SEAIREGLADVAAGRFVSNDEIRNRYTAR 89
>gi|296137984|ref|YP_003645227.1| prevent-host-death family protein [Tsukamurella paurometabola
DSM 20162]
gi|296026118|gb|ADG76888.1| prevent-host-death family protein [Tsukamurella paurometabola
DSM 20162]
Length=91
Score = 84.0 bits (206), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/86 (52%), Positives = 56/86 (66%), Gaps = 0/86 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M VPLGE ++RLS V E TH+ ITITRHG AAVL+SADDL S++ET+ L PG
Sbjct 1 MTTVPLGEAKDRLSALVDSAESTHDIITITRHGRAAAVLMSADDLESMQETIFWLSRPGT 60
Query 61 SEAIREGLADVAAGRFVSNDEIRNRY 86
+ AI E D AAG S +++R +
Sbjct 61 AAAIAEAEHDAAAGTASSGNDLRAEF 86
>gi|340627858|ref|YP_004746310.1| hypothetical protein MCAN_28871 [Mycobacterium canettii CIPT
140010059]
gi|340006048|emb|CCC45218.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=93
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/86 (45%), Positives = 59/86 (69%), Gaps = 0/86 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M ++P+ +++ +L+E+V V T ++ITIT++G PAAVL+ AD+ S++ETL L PG
Sbjct 1 MRILPISKIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
Query 61 SEAIREGLADVAAGRFVSNDEIRNRY 86
E+I E AD+A+GR DEIR +
Sbjct 61 RESIAEADADIASGRTYGEDEIRAEF 86
>gi|333990699|ref|YP_004523313.1| hypothetical protein JDM601_2059 [Mycobacterium sp. JDM601]
gi|333486667|gb|AEF36059.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=96
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/88 (45%), Positives = 59/88 (68%), Gaps = 0/88 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M ++ + +++++L+EYV V T ++ITIT++G PAAVL+ AD+ S++ETL L PG
Sbjct 4 MRILAISKMKDKLNEYVDAVAQTQDQITITKNGAPAAVLVGADEWESLQETLYWLSQPGI 63
Query 61 SEAIREGLADVAAGRFVSNDEIRNRYTA 88
E+I E AD+ AGR DEIR + A
Sbjct 64 KESIAEADADIDAGRTYGEDEIRAEFGA 91
>gi|226887832|pdb|3G5O|A Chain A, The Crystal Structure Of The Toxin-Antitoxin Complex
Relbe2 (Rv2865-2866) From Mycobacterium Tuberculosis
gi|226887835|pdb|3G5O|D Chain D, The Crystal Structure Of The Toxin-Antitoxin Complex
Relbe2 (Rv2865-2866) From Mycobacterium Tuberculosis
Length=108
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/86 (45%), Positives = 58/86 (68%), Gaps = 0/86 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M ++P+ ++ +L+E+V V T ++ITIT++G PAAVL+ AD+ S++ETL L PG
Sbjct 8 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 67
Query 61 SEAIREGLADVAAGRFVSNDEIRNRY 86
E+I E AD+A+GR DEIR +
Sbjct 68 RESIAEADADIASGRTYGEDEIRAEF 93
>gi|15610002|ref|NP_217381.1| hypothetical protein Rv2865 [Mycobacterium tuberculosis H37Rv]
gi|31794042|ref|NP_856535.1| hypothetical protein Mb2890 [Mycobacterium bovis AF2122/97]
gi|121638747|ref|YP_978971.1| hypothetical protein BCG_2887 [Mycobacterium bovis BCG str. Pasteur
1173P2]
72 more sequence titles
Length=93
Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/86 (45%), Positives = 58/86 (68%), Gaps = 0/86 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M ++P+ ++ +L+E+V V T ++ITIT++G PAAVL+ AD+ S++ETL L PG
Sbjct 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
Query 61 SEAIREGLADVAAGRFVSNDEIRNRY 86
E+I E AD+A+GR DEIR +
Sbjct 61 RESIAEADADIASGRTYGEDEIRAEF 86
>gi|326382748|ref|ZP_08204438.1| prevent-host-death family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326198338|gb|EGD55522.1| prevent-host-death family protein [Gordonia neofelifaecis NRRL
B-59395]
Length=90
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/83 (51%), Positives = 52/83 (63%), Gaps = 0/83 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M VPLGE + RLS V E TH+RITIT+HG PAAVLISADDL + ET+ L PG
Sbjct 1 MTTVPLGEAKARLSALVDSAEQTHDRITITKHGKPAAVLISADDLEELTETIHWLSQPGI 60
Query 61 SEAIREGLADVAAGRFVSNDEIR 83
E I G + +G+ S ++R
Sbjct 61 RETIDAGDREYESGQTTSLADLR 83
>gi|284042316|ref|YP_003392656.1| prevent-host-death family protein [Conexibacter woesei DSM 14684]
gi|283946537|gb|ADB49281.1| prevent-host-death family protein [Conexibacter woesei DSM 14684]
Length=99
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/83 (50%), Positives = 56/83 (68%), Gaps = 0/83 (0%)
Query 4 VPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGASEA 63
+PL V++ LSE V VE H+R+ +TR+G PAAVLIS DDL S+EETL +L E
Sbjct 11 LPLSAVKSHLSELVDRVEGQHDRVVVTRNGRPAAVLISPDDLESLEETLAILSDRAMMEK 70
Query 64 IREGLADVAAGRFVSNDEIRNRY 86
+REG A +AAG +S +E+R +
Sbjct 71 VREGDAAIAAGDSISLEELRAQL 93
>gi|50955754|ref|YP_063042.1| hypothetical protein Lxx22678 [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50952236|gb|AAT89937.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length=91
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/86 (49%), Positives = 53/86 (62%), Gaps = 0/86 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M V L E +++LS ++ EVE HE I ITRHGH AAVLIS DDL S+ ETL L G
Sbjct 1 MKTVSLSEAKDKLSRFIDEVESEHEIIQITRHGHGAAVLISQDDLDSLHETLFWLSQSGI 60
Query 61 SEAIREGLADVAAGRFVSNDEIRNRY 86
E + EG V +G V D++R R+
Sbjct 61 REDLAEGRRVVESGTTVGADDVRARF 86
>gi|262202561|ref|YP_003273769.1| prevent-host-death family protein [Gordonia bronchialis DSM 43247]
gi|262085908|gb|ACY21876.1| prevent-host-death family protein [Gordonia bronchialis DSM 43247]
Length=91
Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/86 (46%), Positives = 54/86 (63%), Gaps = 0/86 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M VPLGE +++LS + E TH+ ITIT+HG PAAVL+SADDL S+ ET+ L G
Sbjct 1 MTTVPLGEAKDKLSALIDSAETTHDIITITKHGKPAAVLMSADDLESLHETIYWLSRAGV 60
Query 61 SEAIREGLADVAAGRFVSNDEIRNRY 86
+ + A+ AAG S D++R +
Sbjct 61 RDDVATADAEYAAGHTASIDDLRAEH 86
>gi|312195904|ref|YP_004015965.1| prevent-host-death family protein [Frankia sp. EuI1c]
gi|311227240|gb|ADP80095.1| prevent-host-death family protein [Frankia sp. EuI1c]
Length=93
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/86 (47%), Positives = 57/86 (67%), Gaps = 0/86 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M +P+ + ++RL+E V V LT E++TITR+G PAAVL+ D+ SI+ETL L PG
Sbjct 1 MQTLPISKAKDRLNELVDAVALTREQVTITRNGSPAAVLVGVDEWESIQETLYWLSQPGI 60
Query 61 SEAIREGLADVAAGRFVSNDEIRNRY 86
E++ E AD AGR + DE+R R+
Sbjct 61 RESVAEADADADAGRVLGEDEMRARF 86
>gi|336179277|ref|YP_004584652.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
gi|334860257|gb|AEH10731.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
Length=99
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/66 (60%), Positives = 48/66 (73%), Gaps = 3/66 (4%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M V+P E RNRLSE + EV THER+ ITRHGH AVLIS DDLA++EE L+VL +
Sbjct 1 MTVMPFTEARNRLSELIDEVGRTHERVEITRHGHAVAVLISPDDLAALEEALDVL---AS 57
Query 61 SEAIRE 66
EA+R+
Sbjct 58 REAMRQ 63
>gi|343928186|ref|ZP_08767641.1| hypothetical protein GOALK_110_00270 [Gordonia alkanivorans NBRC
16433]
gi|343761884|dbj|GAA14567.1| hypothetical protein GOALK_110_00270 [Gordonia alkanivorans NBRC
16433]
Length=88
Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/83 (46%), Positives = 54/83 (66%), Gaps = 0/83 (0%)
Query 4 VPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGASEA 63
+PLGE +++LS + E TH+ ITIT+HG PAAVL+SADDL S+ ET+ L G +
Sbjct 1 MPLGEAKDKLSALIDSAETTHDIITITKHGKPAAVLMSADDLESLHETIYWLSRAGLRDD 60
Query 64 IREGLADVAAGRFVSNDEIRNRY 86
+ A+ AAG VS D++R +
Sbjct 61 VATADAEYAAGHTVSIDDLRAEH 83
>gi|86741369|ref|YP_481769.1| prevent-host-death protein [Frankia sp. CcI3]
gi|86568231|gb|ABD12040.1| Prevent-host-death protein [Frankia sp. CcI3]
Length=99
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/82 (46%), Positives = 53/82 (65%), Gaps = 0/82 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M +P + RNRLSE + +VE TH+R+ ITRHGH A+L+S DDLA++EET+EVL
Sbjct 1 MTTLPFTDARNRLSELLDDVERTHDRVEITRHGHAVAILVSPDDLAALEETVEVLSNRET 60
Query 61 SEAIREGLADVAAGRFVSNDEI 82
+ E A V AG + +++
Sbjct 61 MRQLAESRAAVEAGDVLDAEDL 82
>gi|317126593|ref|YP_004100705.1| prevent-host-death family protein [Intrasporangium calvum DSM
43043]
gi|315590681|gb|ADU49978.1| prevent-host-death family protein [Intrasporangium calvum DSM
43043]
Length=88
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/77 (52%), Positives = 49/77 (64%), Gaps = 0/77 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M V PL +VRN S+ + VE HER+T+TR+G P AV++S DDLA +EETL VL P A
Sbjct 1 MTVEPLRDVRNHFSDVIDRVEHEHERVTVTRNGRPVAVILSPDDLAQLEETLSVLSDPEA 60
Query 61 SEAIREGLADVAAGRFV 77
IRE A A G V
Sbjct 61 LADIREADAAYATGDVV 77
>gi|271969007|ref|YP_003343203.1| hypothetical protein Sros_7794 [Streptosporangium roseum DSM
43021]
gi|270512182|gb|ACZ90460.1| hypothetical protein Sros_7794 [Streptosporangium roseum DSM
43021]
Length=94
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/82 (47%), Positives = 52/82 (64%), Gaps = 0/82 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M V+PL + R RLS V THER ITR+G PAAVL++ DD ++ E +E+L +
Sbjct 3 MTVLPLADARARLSSIVESAVSTHERFEITRNGVPAAVLVAVDDYETMREMIEILASAET 62
Query 61 SEAIREGLADVAAGRFVSNDEI 82
A+REG+AD+ AGR S E+
Sbjct 63 VAALREGIADLEAGRTHSQAEV 84
>gi|323358564|ref|YP_004224960.1| antitoxin of toxin-antitoxin stability system [Microbacterium
testaceum StLB037]
gi|323274935|dbj|BAJ75080.1| antitoxin of toxin-antitoxin stability system [Microbacterium
testaceum StLB037]
Length=104
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/89 (44%), Positives = 54/89 (61%), Gaps = 0/89 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M + L + R LS+ V THER +TR+G AVL+SADD S+ ET+++L P
Sbjct 11 MTTLSLADARANLSKLVESAVTTHERFDVTRNGDRVAVLLSADDYDSLLETVDILSRPDE 70
Query 61 SEAIREGLADVAAGRFVSNDEIRNRYTAR 89
A+REGLAD+A GR S +++R T R
Sbjct 71 IAAVREGLADLAEGRTSSLEDVRAAMTVR 99
>gi|336319416|ref|YP_004599384.1| prevent-host-death family protein [Cellvibrio gilvus ATCC 13127]
gi|336102997|gb|AEI10816.1| prevent-host-death family protein [Cellvibrio gilvus ATCC 13127]
Length=91
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/88 (43%), Positives = 52/88 (60%), Gaps = 0/88 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M L +V+ LS +V V THER+TITR+G PAAVLI+ DDLAS+EET+ +L G
Sbjct 1 MTTTSLAKVKAGLSAFVDSVHDTHERVTITRNGEPAAVLIAPDDLASLEETIAILSDRGL 60
Query 61 SEAIREGLADVAAGRFVSNDEIRNRYTA 88
+ +R ++A G + D + A
Sbjct 61 MDDVRTAQREIADGDVIDGDAFLADWRA 88
>gi|315443133|ref|YP_004076012.1| prevent-host-death family protein [Mycobacterium sp. Spyr1]
gi|315261436|gb|ADT98177.1| prevent-host-death family protein [Mycobacterium sp. Spyr1]
Length=94
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/82 (46%), Positives = 52/82 (64%), Gaps = 0/82 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M +PL EVR LS+ V E TH+RI +TR G AAV++SA+D SI ETL++L
Sbjct 1 MTTLPLAEVRANLSKLVDEAVRTHQRIEVTRQGRRAAVILSAEDYDSIMETLDILSDREL 60
Query 61 SEAIREGLADVAAGRFVSNDEI 82
+ +R+G DVA G F + D++
Sbjct 61 MKELRQGQEDVARGNFHTLDDV 82
>gi|297562520|ref|YP_003681494.1| prevent-host-death family protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296846968|gb|ADH68988.1| prevent-host-death family protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length=96
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/82 (43%), Positives = 50/82 (61%), Gaps = 0/82 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M +PL E RN LS+ V EVE TH+ +TITR+G P+AV+IS DD S+ ET +L +P
Sbjct 1 MTTLPLAEARNNLSKIVDEVERTHDAVTITRNGRPSAVVISVDDYESMMETFALLDSPEE 60
Query 61 SEAIREGLADVAAGRFVSNDEI 82
++ + G V+ DE+
Sbjct 61 QASLARAKEEYERGDVVTGDEM 82
>gi|126675444|gb|ABO26358.1| TalA [Leifsonia xyli subsp. cynodontis]
Length=89
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/89 (45%), Positives = 55/89 (62%), Gaps = 0/89 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M + + E +++LS V VE TH+ + ITRHG PAAVLIS +DL S++E L L P
Sbjct 1 MQTMSVSEAKDKLSNLVEGVEATHDAVVITRHGKPAAVLISPEDLDSLQEMLAWLSDPAH 60
Query 61 SEAIREGLADVAAGRFVSNDEIRNRYTAR 89
+ + E DVAAGR +S DE+R + R
Sbjct 61 AAEMAEAEEDVAAGRMLSLDEVRAQLANR 89
>gi|343928185|ref|ZP_08767640.1| hypothetical protein GOALK_110_00260 [Gordonia alkanivorans NBRC
16433]
gi|343761883|dbj|GAA14566.1| hypothetical protein GOALK_110_00260 [Gordonia alkanivorans NBRC
16433]
Length=81
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/58 (49%), Positives = 40/58 (69%), Gaps = 0/58 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTP 58
M PLGE +++ + + E TH+ ITI++HG PAAVL+SADDL S+ ET++ R P
Sbjct 1 MTTQPLGEAKDKFTALIDSAETTHDIITISKHGKPAAVLMSADDLESLRETIQRSRHP 58
>gi|256371947|ref|YP_003109771.1| prevent-host-death family protein [Acidimicrobium ferrooxidans
DSM 10331]
gi|256008531|gb|ACU54098.1| prevent-host-death family protein [Acidimicrobium ferrooxidans
DSM 10331]
Length=99
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/87 (38%), Positives = 52/87 (60%), Gaps = 0/87 (0%)
Query 3 VVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGASE 62
+VP+ E+R+ LS+ + +V E + +TRHG PAAVL+ D+ ++EET E+L
Sbjct 10 IVPIRELRSELSQVIDQVADLREHVIVTRHGRPAAVLVPVDEYEALEETAEILSDTETMA 69
Query 63 AIREGLADVAAGRFVSNDEIRNRYTAR 89
AI EG +V G ++ DE+R +R
Sbjct 70 AIDEGRREVERGETLTLDELRQELQSR 96
>gi|119716906|ref|YP_923871.1| prevent-host-death family protein [Nocardioides sp. JS614]
gi|119537567|gb|ABL82184.1| prevent-host-death family protein [Nocardioides sp. JS614]
Length=94
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/83 (43%), Positives = 49/83 (60%), Gaps = 0/83 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M + L R LS+ V THER +TR+G AVL+SA+D ++ ET++VL
Sbjct 1 MTTLSLAAARASLSKLVEAAVTTHERFEVTRNGDRVAVLLSAEDYDALLETVDVLSRADE 60
Query 61 SEAIREGLADVAAGRFVSNDEIR 83
EA+R GLAD+ AG + DE+R
Sbjct 61 VEALRAGLADLEAGEVSTLDEVR 83
>gi|226362357|ref|YP_002780135.1| hypothetical protein ROP_29430 [Rhodococcus opacus B4]
gi|226240842|dbj|BAH51190.1| hypothetical protein [Rhodococcus opacus B4]
Length=101
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/87 (40%), Positives = 50/87 (58%), Gaps = 0/87 (0%)
Query 3 VVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGASE 62
V+ L V+ LSE V V HER+T+T HG P+AVLI+ +DL S+EET+ +L P +
Sbjct 10 VMSLAAVKAHLSELVGRVNAQHERVTVTVHGQPSAVLIATEDLESLEETIAILSDPDTLQ 69
Query 63 AIREGLADVAAGRFVSNDEIRNRYTAR 89
+ A++A G S E+ + R
Sbjct 70 RLAASDAELARGEGESEAELTKVMSER 96
>gi|317125201|ref|YP_004099313.1| prevent-host-death family protein [Intrasporangium calvum DSM
43043]
gi|315589289|gb|ADU48586.1| prevent-host-death family protein [Intrasporangium calvum DSM
43043]
Length=93
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/55 (50%), Positives = 39/55 (71%), Gaps = 0/55 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVL 55
M +PL + + LSE ++ V HER+T+T HG P+AVL++ DDLA +EET+ VL
Sbjct 1 MTSIPLADAKAHLSEVISRVSKHHERVTVTVHGQPSAVLLAPDDLAMLEETIAVL 55
>gi|23006087|ref|ZP_00048575.1| COG2161: Antitoxin of toxin-antitoxin stability system [Magnetospirillum
magnetotacticum MS-1]
Length=76
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/58 (52%), Positives = 38/58 (66%), Gaps = 0/58 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTP 58
M P+ E + LS V EVE TH+ +TITRHG AAVLI+ +DLA++ ETL L P
Sbjct 1 MQTYPMSEAKTNLSALVDEVESTHQPVTITRHGKAAAVLIAPEDLATLMETLAWLSDP 58
>gi|301057765|ref|ZP_07198834.1| toxin-antitoxin system, antitoxin component, PHD family [delta
proteobacterium NaphS2]
gi|300448076|gb|EFK11772.1| toxin-antitoxin system, antitoxin component, PHD family [delta
proteobacterium NaphS2]
Length=90
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/83 (37%), Positives = 51/83 (62%), Gaps = 0/83 (0%)
Query 4 VPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGASEA 63
+P+ E + RLS + +V+ ++R IT++G AVL+S+D+ + ETL++L EA
Sbjct 5 IPVAEAKKRLSAIIKDVDEKYDRYAITKNGVNKAVLLSSDEFEGLLETLDILSQREEREA 64
Query 64 IREGLADVAAGRFVSNDEIRNRY 86
I + +V +G+ VS EI+ RY
Sbjct 65 IEKAKKEVRSGQTVSFKEIQRRY 87
>gi|269796007|ref|YP_003315462.1| prevent-host-death family protein [Sanguibacter keddieii DSM
10542]
gi|269098192|gb|ACZ22628.1| prevent-host-death family protein [Sanguibacter keddieii DSM
10542]
Length=82
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 0/80 (0%)
Query 4 VPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGASEA 63
+ L + RL V VE TH+R+ ITR G PAAVL+S DDLA++EET+E+L A
Sbjct 1 MSLALAKARLPSIVGSVEATHDRVIITRAGEPAAVLVSLDDLAALEETIEILSDGAAVAE 60
Query 64 IREGLADVAAGRFVSNDEIR 83
+ + +++ A + E+R
Sbjct 61 LVQARSEIDAKTTIELSELR 80
>gi|284990457|ref|YP_003409011.1| prevent-host-death family protein [Geodermatophilus obscurus
DSM 43160]
gi|284063702|gb|ADB74640.1| prevent-host-death family protein [Geodermatophilus obscurus
DSM 43160]
Length=95
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/82 (38%), Positives = 47/82 (58%), Gaps = 0/82 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M L V+ S+ + EV THER+T+T++G P AV+++ +D S+ ETLE+L P A
Sbjct 5 MTTQSLAAVKAHFSQVIDEVAGTHERVTVTKNGSPVAVILAVEDYESLMETLEILSDPRA 64
Query 61 SEAIREGLADVAAGRFVSNDEI 82
IR+ +AAG E+
Sbjct 65 RSDIRQAEELMAAGEVYGEAEV 86
>gi|312140751|ref|YP_004008087.1| hypothetical protein REQ_34130 [Rhodococcus equi 103S]
gi|311890090|emb|CBH49408.1| hypothetical protein REQ_34130 [Rhodococcus equi 103S]
Length=192
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/46 (61%), Positives = 31/46 (68%), Gaps = 0/46 (0%)
Query 4 VPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIE 49
VP GE R +L E V V ERITITRHG PAA L+S DDL S+E
Sbjct 6 VPFGEARAQLRELVCRVGYRGERITITRHGAPAAALVSLDDLRSLE 51
>gi|325675609|ref|ZP_08155293.1| prevent-host-death family antitoxin [Rhodococcus equi ATCC 33707]
gi|325553580|gb|EGD23258.1| prevent-host-death family antitoxin [Rhodococcus equi ATCC 33707]
Length=192
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/46 (61%), Positives = 31/46 (68%), Gaps = 0/46 (0%)
Query 4 VPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIE 49
VP GE R +L E V V ERITITRHG PAA L+S DDL S+E
Sbjct 6 VPFGEARAQLRELVCRVGYRGERITITRHGAPAAALVSLDDLRSLE 51
>gi|258593421|emb|CBE69760.1| Prevent-host-death protein [NC10 bacterium 'Dutch sediment']
Length=92
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/75 (43%), Positives = 44/75 (59%), Gaps = 0/75 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M +PL EV+ +LS + EV E+I ITR+G PAAVLIS D+ S +ET+ +
Sbjct 1 MKTLPLSEVKMKLSRLIDEVHSRDEQIVITRNGKPAAVLISPDEAESWQETVAIRTDTEL 60
Query 61 SEAIREGLADVAAGR 75
E IR GL +A +
Sbjct 61 MEEIRGGLRGLAKTK 75
>gi|291437271|ref|ZP_06576661.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
gi|291340166|gb|EFE67122.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
Length=78
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/67 (44%), Positives = 38/67 (57%), Gaps = 0/67 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M PL + R+RLSE V V + E IT+HG P AV++ AD+ S+ ETL VL
Sbjct 1 MDAAPLTDARDRLSEIVDSVAASGEAFVITKHGKPMAVILGADEYESLIETLNVLSDSDT 60
Query 61 SEAIREG 67
+AI E
Sbjct 61 MDAINEA 67
>gi|302036727|ref|YP_003797049.1| antitoxin of toxin-antitoxin stability system [Candidatus Nitrospira
defluvii]
gi|300604791|emb|CBK41123.1| Antitoxin of toxin-antitoxin stability system [Candidatus Nitrospira
defluvii]
Length=98
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (43%), Positives = 40/64 (63%), Gaps = 0/64 (0%)
Query 6 LGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGASEAIR 65
L EV+ RL E VA V+ E + IT++G PAA+L++ D+ ++ET++VL PG I
Sbjct 7 LSEVKTRLPELVAGVQEREEEVIITKNGRPAAILMNVDEYTRLKETVDVLSDPGLMSQIA 66
Query 66 EGLA 69
E A
Sbjct 67 ESRA 70
>gi|334118310|ref|ZP_08492400.1| prevent-host-death family protein [Microcoleus vaginatus FGP-2]
gi|333460295|gb|EGK88905.1| prevent-host-death family protein [Microcoleus vaginatus FGP-2]
Length=78
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/67 (41%), Positives = 41/67 (62%), Gaps = 1/67 (1%)
Query 3 VVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGASE 62
++P+ E + +L + + V +H+ I I AVL+S D AS++ETL +L PG E
Sbjct 1 MIPINEAQQQLQQLIDAVSQSHQPIVIAGQTS-NAVLLSESDWASVQETLYLLSVPGMRE 59
Query 63 AIREGLA 69
+IREGLA
Sbjct 60 SIREGLA 66
>gi|167762211|ref|ZP_02434338.1| hypothetical protein BACSTE_00563 [Bacteroides stercoris ATCC
43183]
gi|167699854|gb|EDS16433.1| hypothetical protein BACSTE_00563 [Bacteroides stercoris ATCC
43183]
Length=96
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (36%), Positives = 44/81 (55%), Gaps = 0/81 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M E+RN L Y+ V E + + R G+ + V+IS D+ SI+ET ++++P
Sbjct 1 MRTANYSELRNNLKHYLDGVINDSEPLLVHRAGNESVVVISLDEYNSIKETEYIMKSPAT 60
Query 61 SEAIREGLADVAAGRFVSNDE 81
EAIR+G D+ G VS E
Sbjct 61 MEAIRKGEEDIKNGNCVSQHE 81
>gi|298530053|ref|ZP_07017455.1| prevent-host-death family protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509427|gb|EFI33331.1| prevent-host-death family protein [Desulfonatronospira thiodismutans
ASO3-1]
Length=80
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/70 (45%), Positives = 44/70 (63%), Gaps = 3/70 (4%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITIT-RHGHPAAVLISADDLASIEETLEVLRTPG 59
M + E R++L + E + +HE I IT + G +AVL+S DD SI+ETL +L PG
Sbjct 1 MPTLTATEARSKLYRLIDEAKTSHEPIVITGKRG--SAVLVSEDDWRSIQETLYLLNIPG 58
Query 60 ASEAIREGLA 69
E+IR+GLA
Sbjct 59 MRESIRKGLA 68
>gi|218517196|ref|ZP_03514036.1| hypothetical protein Retl8_28475 [Rhizobium etli 8C-3]
Length=83
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (57%), Gaps = 0/80 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
MA V L E R ++ Y +V + + +TR G A VLI+ + S++ETL +L TP
Sbjct 1 MAHVRLTEFRQNIATYFDQVLSSRAPLLVTRQGSEAMVLIAESEYESMQETLHLLSTPAN 60
Query 61 SEAIREGLADVAAGRFVSND 80
S +RE +A + G+ + +D
Sbjct 61 SARLRESIAQLRKGQVIESD 80
>gi|319956796|ref|YP_004168059.1| prevent-host-death family protein [Nitratifractor salsuginis
DSM 16511]
gi|319419200|gb|ADV46310.1| prevent-host-death family protein [Nitratifractor salsuginis
DSM 16511]
Length=84
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/76 (35%), Positives = 39/76 (52%), Gaps = 0/76 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M V RN L + +V+ E IT + A+LIS D+ +++ETL +L TP
Sbjct 1 MRAVNYSHARNNLKSLIDDVDQNFEEYLITTKNNTKAMLISVDEYNAMKETLYLLSTPAN 60
Query 61 SEAIREGLADVAAGRF 76
E + E + + AGRF
Sbjct 61 RERLLESIQQIEAGRF 76
>gi|308274399|emb|CBX30998.1| hypothetical protein N47_E45100 [uncultured Desulfobacterium
sp.]
Length=92
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/87 (28%), Positives = 48/87 (56%), Gaps = 6/87 (6%)
Query 3 VVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGASE 62
+VP+ E + ++S+Y+ ++ T + IT++G PA VL++ DD E++ E
Sbjct 10 IVPVAEFKVQVSKYLKNIKTTGRPMVITQNGKPAGVLLTPDDFE------ELIYQKSLIE 63
Query 63 AIREGLADVAAGRFVSNDEIRNRYTAR 89
+I G++D+ G + +E+R + R
Sbjct 64 SIGRGISDLEKGNIFTTEELRAKLEKR 90
>gi|307947051|ref|ZP_07662386.1| toxin-antitoxin system, antitoxin component, PHD family [Roseibium
sp. TrichSKD4]
gi|307770715|gb|EFO29941.1| toxin-antitoxin system, antitoxin component, PHD family [Roseibium
sp. TrichSKD4]
Length=84
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/76 (39%), Positives = 46/76 (61%), Gaps = 1/76 (1%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHG-HPAAVLISADDLASIEETLEVLRTPG 59
M ++R LS + EV HE + ITR+G PAAVL+S +D AS EET +L +PG
Sbjct 1 MRATSYSDLRRNLSATLDEVADDHEPVLITRNGGKPAAVLMSLEDFASYEETRYLLSSPG 60
Query 60 ASEAIREGLADVAAGR 75
++ + + + ++ AG+
Sbjct 61 NAQRLLKAVEELDAGQ 76
>gi|254389151|ref|ZP_05004380.1| hypothetical protein SSCG_01707 [Streptomyces clavuligerus ATCC
27064]
gi|326445001|ref|ZP_08219735.1| hypothetical protein SclaA2_28220 [Streptomyces clavuligerus
ATCC 27064]
gi|197702867|gb|EDY48679.1| hypothetical protein SSCG_01707 [Streptomyces clavuligerus ATCC
27064]
Length=85
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/54 (47%), Positives = 32/54 (60%), Gaps = 0/54 (0%)
Query 3 VVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLR 56
+P+ E R R V ERITIT HGHPAAVLI+ +LA +E+ L + R
Sbjct 4 TLPITEARARFGSLVRRASHARERITITDHGHPAAVLINPQELADLEDALALAR 57
>gi|254497691|ref|ZP_05110470.1| Prevent-host-death protein [Legionella drancourtii LLAP12]
gi|254353098|gb|EET11854.1| Prevent-host-death protein [Legionella drancourtii LLAP12]
Length=84
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/77 (32%), Positives = 44/77 (58%), Gaps = 0/77 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M V+ +RN L+ + +V H I ITR AV++S +D S EET ++ +P
Sbjct 1 MDVLSYSSLRNNLASTLDKVNEDHVSILITRQNGKPAVIMSLEDFKSYEETAYLMSSPKN 60
Query 61 SEAIREGLADVAAGRFV 77
+E + + +A++ AG+++
Sbjct 61 AERLNKSIAEMEAGKYI 77
>gi|289664119|ref|ZP_06485700.1| hypothetical protein XcampvN_13880 [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length=83
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/75 (35%), Positives = 44/75 (59%), Gaps = 0/75 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M ++ R L+E + V HE + ITR G A V++S DD +++ET +LR+P +
Sbjct 1 MNIITYSAARASLAETMDRVVNDHEPVIITRSGKRAVVMMSLDDYKAMKETAYLLRSPKS 60
Query 61 SEAIREGLADVAAGR 75
++ + E +A + AGR
Sbjct 61 AQRLLESIAQLEAGR 75
>gi|212703231|ref|ZP_03311359.1| hypothetical protein DESPIG_01273 [Desulfovibrio piger ATCC 29098]
gi|212673497|gb|EEB33980.1| hypothetical protein DESPIG_01273 [Desulfovibrio piger ATCC 29098]
Length=84
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/73 (39%), Positives = 41/73 (57%), Gaps = 0/73 (0%)
Query 8 EVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGASEAIREG 67
E R L+E + V HE + ITR P+ VL+S +D +I ET +LR+P + +RE
Sbjct 9 EARQNLAETMNRVCDHHEPVIITRQKSPSVVLMSLEDYNAIMETAYLLRSPANAARLREA 68
Query 68 LADVAAGRFVSND 80
L AG+ V +D
Sbjct 69 LHAADAGKTVQHD 81
>gi|30248721|ref|NP_840791.1| hypothetical protein NE0712 [Nitrosomonas europaea ATCC 19718]
gi|30180316|emb|CAD84623.1| DUF172 [Nitrosomonas europaea ATCC 19718]
Length=98
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/75 (34%), Positives = 44/75 (59%), Gaps = 0/75 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M + R +L++ + V HE I ITR+G + V++S DD ++EET +LR+P
Sbjct 16 MDAITYSTARAKLADTMNRVCDNHEPIIITRNGEQSVVMMSLDDFKALEETSYLLRSPKN 75
Query 61 SEAIREGLADVAAGR 75
++ + E +A + +GR
Sbjct 76 AKRLLESIAALESGR 90
>gi|227543351|ref|ZP_03973400.1| prevent-host-death family protein [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227180856|gb|EEI61828.1| prevent-host-death family protein [Corynebacterium glucuronolyticum
ATCC 51866]
Length=84
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (33%), Positives = 44/80 (55%), Gaps = 0/80 (0%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
M + E R R +E + V E I ITR GH +AV++S DD S+ ET ++R+P
Sbjct 1 MKTMSYSESRARYAEVLQSVVDNREEIVITRSGHESAVILSLDDYNSLRETAYLMRSPRN 60
Query 61 SEAIREGLADVAAGRFVSND 80
++ + E + ++ +G + D
Sbjct 61 AQLLFEAVTELESGNGTARD 80
>gi|158522616|ref|YP_001530486.1| prevent-host-death family protein [Desulfococcus oleovorans Hxd3]
gi|158511442|gb|ABW68409.1| prevent-host-death family protein [Desulfococcus oleovorans Hxd3]
Length=80
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/70 (43%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query 1 MAVVPLGEVRNRLSEYVAEVELTHERITIT-RHGHPAAVLISADDLASIEETLEVLRTPG 59
M + E R++L + E +HE I I + G+ AVLIS DD SI+ET+ +L PG
Sbjct 1 MPTLTATEARSKLYGLIDETAASHEPIIIKGKRGN--AVLISEDDWRSIQETIYLLNIPG 58
Query 60 ASEAIREGLA 69
E+IR+GLA
Sbjct 59 MRESIRDGLA 68
>gi|148263387|ref|YP_001230093.1| prevent-host-death family protein [Geobacter uraniireducens Rf4]
gi|146396887|gb|ABQ25520.1| prevent-host-death family protein [Geobacter uraniireducens Rf4]
Length=94
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/87 (27%), Positives = 46/87 (53%), Gaps = 6/87 (6%)
Query 3 VVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGASE 62
++P+ E + +S++ ++ + + IT++G PA VL+S DD + L +
Sbjct 10 IIPIAEFKTGISKWFKSLQKSGHPLIITQNGKPAGVLLSPDDYDDLVYKKSFL------D 63
Query 63 AIREGLADVAAGRFVSNDEIRNRYTAR 89
++ G++D +GR + DEI+ AR
Sbjct 64 SVGRGISDAESGRTYNTDEIKAALAAR 90
Lambda K H
0.316 0.132 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129638988780
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40