BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1251c Length=1139 Score E Sequences producing significant alignments: (Bits) Value gi|15840697|ref|NP_335734.1| hypothetical protein MT1290 [Mycoba... 2294 0.0 gi|15608391|ref|NP_215767.1| hypothetical protein Rv1251c [Mycob... 2292 0.0 gi|167969573|ref|ZP_02551850.1| hypothetical protein MtubH3_1674... 2288 0.0 gi|254364150|ref|ZP_04980196.1| hypothetical helicase [Mycobacte... 2288 0.0 gi|254231508|ref|ZP_04924835.1| conserved hypothetical protein [... 2288 0.0 gi|289753322|ref|ZP_06512700.1| conserved hypothetical protein [... 2287 0.0 gi|340626264|ref|YP_004744716.1| hypothetical protein MCAN_12651... 2282 0.0 gi|289749794|ref|ZP_06509172.1| conserved hypothetical protein [... 2162 0.0 gi|15827541|ref|NP_301804.1| hypothetical protein ML1098 [Mycoba... 1763 0.0 gi|240172267|ref|ZP_04750926.1| hypothetical protein MkanA1_2333... 1756 0.0 gi|118619601|ref|YP_907933.1| hypothetical protein MUL_4495 [Myc... 1738 0.0 gi|183984163|ref|YP_001852454.1| hypothetical protein MMAR_4191 ... 1713 0.0 gi|41408631|ref|NP_961467.1| hypothetical protein MAP2533 [Mycob... 1705 0.0 gi|118465360|ref|YP_880631.1| ATPase [Mycobacterium avium 104] >... 1704 0.0 gi|254774268|ref|ZP_05215784.1| ATPase [Mycobacterium avium subs... 1704 0.0 gi|336458581|gb|EGO37548.1| RecB family nuclease, putative, TM01... 1703 0.0 gi|296170153|ref|ZP_06851750.1| ATPase [Mycobacterium parascrofu... 1681 0.0 gi|342862128|ref|ZP_08718771.1| hypothetical protein MCOL_24676 ... 1652 0.0 gi|289761401|ref|ZP_06520779.1| conserved hypothetical protein [... 1638 0.0 gi|289442687|ref|ZP_06432431.1| conserved hypothetical protein [... 1540 0.0 gi|289573911|ref|ZP_06454138.1| conserved hypothetical protein [... 1498 0.0 gi|298524754|ref|ZP_07012163.1| conserved hypothetical protein [... 1491 0.0 gi|126436558|ref|YP_001072249.1| RecB family-like nuclease [Myco... 1468 0.0 gi|108800933|ref|YP_641130.1| RecB family-like nuclease [Mycobac... 1467 0.0 gi|120405424|ref|YP_955253.1| RecB family-like nuclease [Mycobac... 1444 0.0 gi|118471145|ref|YP_889294.1| ATPase [Mycobacterium smegmatis st... 1426 0.0 gi|315443278|ref|YP_004076157.1| nuclease (RecB family) [Mycobac... 1409 0.0 gi|145222811|ref|YP_001133489.1| RecB family-like nuclease [Myco... 1409 0.0 gi|169628492|ref|YP_001702141.1| hypothetical protein MAB_1401c ... 1301 0.0 gi|226365500|ref|YP_002783283.1| hypothetical protein ROP_60910 ... 1165 0.0 gi|111022995|ref|YP_705967.1| hypothetical protein RHA1_ro06032 ... 1153 0.0 gi|312138925|ref|YP_004006261.1| hypothetical protein REQ_14980 ... 1110 0.0 gi|226307591|ref|YP_002767551.1| hypothetical protein RER_41040 ... 1109 0.0 gi|325676652|ref|ZP_08156328.1| ATPase [Rhodococcus equi ATCC 33... 1109 0.0 gi|229493797|ref|ZP_04387575.1| RecB family nuclease, family pro... 1108 0.0 gi|254819461|ref|ZP_05224462.1| hypothetical protein MintA_06029... 1086 0.0 gi|333919772|ref|YP_004493353.1| hypothetical protein AS9A_2104 ... 1029 0.0 gi|269793599|ref|YP_003313054.1| nuclease (RecB family) [Sanguib... 983 0.0 gi|296131070|ref|YP_003638320.1| RecB family nuclease, putative ... 952 0.0 gi|308176400|ref|YP_003915806.1| hypothetical protein AARI_06070... 951 0.0 gi|119964334|ref|YP_946897.1| hypothetical protein AAur_1108 [Ar... 927 0.0 gi|84497795|ref|ZP_00996592.1| hypothetical protein JNB_16948 [J... 908 0.0 gi|116669455|ref|YP_830388.1| hypothetical protein Arth_0890 [Ar... 872 0.0 gi|323358756|ref|YP_004225152.1| superfamily I DNA and RNA helic... 861 0.0 gi|220911774|ref|YP_002487083.1| hypothetical protein Achl_1000 ... 855 0.0 gi|325962340|ref|YP_004240246.1| nuclease (RecB family) [Arthrob... 840 0.0 gi|50955194|ref|YP_062482.1| hypothetical protein Lxx15790 [Leif... 808 0.0 gi|281415292|ref|ZP_06247034.1| predicted nuclease (RecB family)... 797 0.0 gi|239918505|ref|YP_002958063.1| nuclease (RecB family) [Microco... 796 0.0 gi|256823963|ref|YP_003147923.1| nuclease (RecB family) [Kytococ... 780 0.0 >gi|15840697|ref|NP_335734.1| hypothetical protein MT1290 [Mycobacterium tuberculosis CDC1551] gi|308231793|ref|ZP_07663936.1| hypothetical protein TMAG_01883 [Mycobacterium tuberculosis SUMu001] gi|308370013|ref|ZP_07666844.1| hypothetical protein TMBG_01356 [Mycobacterium tuberculosis SUMu002] 23 more sequence titles Length=1147 Score = 2294 bits (5945), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1139/1139 (100%), Positives = 1139/1139 (100%), Gaps = 0/1139 (0%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR Sbjct 9 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 68 Query 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL Sbjct 69 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 128 Query 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE Sbjct 129 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 188 Query 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV Sbjct 189 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 248 Query 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP Sbjct 249 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 308 Query 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA Sbjct 309 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 368 Query 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL Sbjct 369 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 428 Query 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL Sbjct 429 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 488 Query 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD Sbjct 489 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 548 Query 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT Sbjct 549 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 608 Query 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET Sbjct 609 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 668 Query 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS Sbjct 669 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 728 Query 721 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI 780 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI Sbjct 729 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI 788 Query 781 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE 840 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE Sbjct 789 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE 848 Query 841 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP 900 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP Sbjct 849 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP 908 Query 901 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR Sbjct 909 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 968 Query 961 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR 1020 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR Sbjct 969 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR 1028 Query 1021 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA 1080 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA Sbjct 1029 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA 1088 Query 1081 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS 1139 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS Sbjct 1089 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS 1147 >gi|15608391|ref|NP_215767.1| hypothetical protein Rv1251c [Mycobacterium tuberculosis H37Rv] gi|31792444|ref|NP_854937.1| hypothetical protein Mb1283c [Mycobacterium bovis AF2122/97] gi|121637180|ref|YP_977403.1| hypothetical protein BCG_1311c [Mycobacterium bovis BCG str. Pasteur 1173P2] 33 more sequence titles Length=1139 Score = 2292 bits (5939), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1138/1139 (99%), Positives = 1139/1139 (100%), Gaps = 0/1139 (0%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 +FVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR Sbjct 1 MFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 Query 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL Sbjct 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 Query 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE Sbjct 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 Query 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV Sbjct 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 Query 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP Sbjct 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 Query 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA Sbjct 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 Query 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL Sbjct 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 Query 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL Sbjct 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 Query 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD Sbjct 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 Query 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT Sbjct 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 Query 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET Sbjct 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 Query 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS Sbjct 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 Query 721 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI 780 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI Sbjct 721 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI 780 Query 781 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE 840 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE Sbjct 781 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE 840 Query 841 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP 900 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP Sbjct 841 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP 900 Query 901 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR Sbjct 901 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 Query 961 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR 1020 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR Sbjct 961 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR 1020 Query 1021 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA 1080 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA Sbjct 1021 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA 1080 Query 1081 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS 1139 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS Sbjct 1081 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS 1139 >gi|167969573|ref|ZP_02551850.1| hypothetical protein MtubH3_16746 [Mycobacterium tuberculosis H37Ra] Length=1139 Score = 2288 bits (5930), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1137/1139 (99%), Positives = 1138/1139 (99%), Gaps = 0/1139 (0%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 +FVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR Sbjct 1 MFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 Query 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL Sbjct 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 Query 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE Sbjct 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 Query 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV Sbjct 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 Query 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP Sbjct 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 Query 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA Sbjct 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 Query 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL Sbjct 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 Query 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL Sbjct 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 Query 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD Sbjct 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 Query 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT Sbjct 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 Query 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 VDWHMPPRARKPQRRVRLTGELARGDLNGNV ALYEPPAPPGMTDNPDRRAAGPAAVVET Sbjct 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVLALYEPPAPPGMTDNPDRRAAGPAAVVET 660 Query 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS Sbjct 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 Query 721 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI 780 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI Sbjct 721 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI 780 Query 781 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE 840 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE Sbjct 781 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE 840 Query 841 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP 900 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP Sbjct 841 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP 900 Query 901 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR Sbjct 901 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 Query 961 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR 1020 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR Sbjct 961 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR 1020 Query 1021 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA 1080 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA Sbjct 1021 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA 1080 Query 1081 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS 1139 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS Sbjct 1081 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS 1139 >gi|254364150|ref|ZP_04980196.1| hypothetical helicase [Mycobacterium tuberculosis str. Haarlem] gi|134149664|gb|EBA41709.1| hypothetical helicase [Mycobacterium tuberculosis str. Haarlem] Length=1139 Score = 2288 bits (5928), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1137/1139 (99%), Positives = 1138/1139 (99%), Gaps = 0/1139 (0%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 +FVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR Sbjct 1 MFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 Query 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL Sbjct 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 Query 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE Sbjct 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 Query 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV Sbjct 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 Query 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP Sbjct 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 Query 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA Sbjct 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 Query 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL Sbjct 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 Query 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL Sbjct 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 Query 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD Sbjct 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 Query 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT Sbjct 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 Query 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET Sbjct 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 Query 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS Sbjct 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 Query 721 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI 780 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI Sbjct 721 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI 780 Query 781 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE 840 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE Sbjct 781 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE 840 Query 841 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP 900 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP Sbjct 841 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP 900 Query 901 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR Sbjct 901 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 Query 961 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR 1020 LCSHTERTAVRRLDGY PGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR Sbjct 961 LCSHTERTAVRRLDGYHPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR 1020 Query 1021 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA 1080 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA Sbjct 1021 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA 1080 Query 1081 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS 1139 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS Sbjct 1081 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS 1139 >gi|254231508|ref|ZP_04924835.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|124600567|gb|EAY59577.1| conserved hypothetical protein [Mycobacterium tuberculosis C] Length=1139 Score = 2288 bits (5928), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1137/1139 (99%), Positives = 1138/1139 (99%), Gaps = 0/1139 (0%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 +FVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR Sbjct 1 MFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 Query 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL Sbjct 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 Query 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE Sbjct 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 Query 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV Sbjct 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 Query 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP Sbjct 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 Query 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA Sbjct 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 Query 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL Sbjct 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 Query 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 VRK IRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL Sbjct 421 VRKIIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 Query 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD Sbjct 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 Query 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT Sbjct 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 Query 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET Sbjct 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 Query 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS Sbjct 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 Query 721 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI 780 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI Sbjct 721 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI 780 Query 781 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE 840 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE Sbjct 781 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE 840 Query 841 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP 900 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP Sbjct 841 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP 900 Query 901 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR Sbjct 901 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 Query 961 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR 1020 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR Sbjct 961 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR 1020 Query 1021 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA 1080 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA Sbjct 1021 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA 1080 Query 1081 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS 1139 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS Sbjct 1081 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS 1139 >gi|289753322|ref|ZP_06512700.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289693909|gb|EFD61338.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length=1139 Score = 2287 bits (5926), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1136/1139 (99%), Positives = 1137/1139 (99%), Gaps = 0/1139 (0%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 +FVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR Sbjct 1 MFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 Query 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL Sbjct 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 Query 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE Sbjct 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 Query 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV Sbjct 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 Query 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP Sbjct 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 Query 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA Sbjct 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 Query 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL Sbjct 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 Query 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL Sbjct 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 Query 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD Sbjct 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 Query 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT Sbjct 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 Query 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET Sbjct 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 Query 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 DDPTVPTEVVIVERT SDGN FQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS Sbjct 661 DDPTVPTEVVIVERTRSDGNIFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 Query 721 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI 780 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI Sbjct 721 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI 780 Query 781 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE 840 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE Sbjct 781 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE 840 Query 841 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP 900 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP Sbjct 841 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP 900 Query 901 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR Sbjct 901 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 Query 961 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR 1020 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR Sbjct 961 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR 1020 Query 1021 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA 1080 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA Sbjct 1021 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA 1080 Query 1081 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS 1139 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS Sbjct 1081 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS 1139 >gi|340626264|ref|YP_004744716.1| hypothetical protein MCAN_12651 [Mycobacterium canettii CIPT 140010059] gi|340004454|emb|CCC43597.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=1139 Score = 2282 bits (5914), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1135/1139 (99%), Positives = 1137/1139 (99%), Gaps = 0/1139 (0%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 +FVTG+SIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR Sbjct 1 MFVTGNSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 Query 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL Sbjct 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 Query 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE Sbjct 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 Query 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV Sbjct 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 Query 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP Sbjct 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 Query 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHD TAERQA Sbjct 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDWTAERQA 360 Query 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL Sbjct 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 Query 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL Sbjct 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 Query 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD Sbjct 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 Query 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT Sbjct 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 Query 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET Sbjct 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 Query 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASG PQLPS Sbjct 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGLPQLPS 720 Query 721 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI 780 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI Sbjct 721 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI 780 Query 781 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE 840 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE Sbjct 781 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE 840 Query 841 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP 900 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP Sbjct 841 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP 900 Query 901 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR Sbjct 901 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 Query 961 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR 1020 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR Sbjct 961 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR 1020 Query 1021 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA 1080 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA Sbjct 1021 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA 1080 Query 1081 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS 1139 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS Sbjct 1081 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS 1139 >gi|289749794|ref|ZP_06509172.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289690381|gb|EFD57810.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=1141 Score = 2162 bits (5601), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1102/1142 (97%), Positives = 1106/1142 (97%), Gaps = 4/1142 (0%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 +FVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR Sbjct 1 MFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 Query 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL Sbjct 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 Query 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE Sbjct 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 Query 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV Sbjct 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 Query 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP Sbjct 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 Query 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA Sbjct 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 Query 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL Sbjct 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 Query 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL Sbjct 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 Query 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD Sbjct 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 Query 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT Sbjct 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 Query 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET Sbjct 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 Query 661 DDPTVPTEVVIVERTGS--DGNTFQQLPF-ALAPGPPVPTTALRESIESTAAAVASGSPQ 717 DDP VPTEVVI RT F +LPF A + +SIE Q Sbjct 661 DDPIVPTEVVI-RRTNPAVTATHFSRLPFRARSRAAGANDGPCGKSIEIDGRCRGFRIAQ 719 Query 718 LPSTALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAA 777 LPSTALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAA Sbjct 720 LPSTALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAA 779 Query 778 RVIAELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQ 837 RVIAELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQ Sbjct 780 RVIAELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQ 839 Query 838 YTEFIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLL 897 YTEFIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLL Sbjct 840 YTEFIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLL 899 Query 898 GDPQQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSY 957 GDPQQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSY Sbjct 900 GDPQQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSY 959 Query 958 EGRLCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEH 1017 EGRLCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEH Sbjct 960 EGRLCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEH 1019 Query 1018 GTRPLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTA 1077 GTRPLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTA Sbjct 1020 GTRPLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTA 1079 Query 1078 SSADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTS 1137 SSADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTS Sbjct 1080 SSADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTS 1139 Query 1138 TS 1139 TS Sbjct 1140 TS 1141 >gi|15827541|ref|NP_301804.1| hypothetical protein ML1098 [Mycobacterium leprae TN] gi|221230018|ref|YP_002503434.1| hypothetical protein MLBr_01098 [Mycobacterium leprae Br4923] gi|13093091|emb|CAC31479.1| conserved hypothetical protein [Mycobacterium leprae] gi|219933125|emb|CAR71193.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=1152 Score = 1763 bits (4567), Expect = 0.0, Method: Compositional matrix adjust. Identities = 861/1141 (76%), Positives = 982/1141 (87%), Gaps = 7/1141 (0%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAV-DDELMARAAVLGSAHEGR 59 +FVT ++IVYSASDLAAA+RC+YALLR+FDA+LGRGP VA +DEL AR + LG+ HE R Sbjct 1 MFVTDETIVYSASDLAAASRCEYALLRDFDARLGRGPVVATTEDELFARTSALGADHEQR 60 Query 60 RLDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADF 119 LDQLRHEFGDAVA+IGRPAYT AG AAAA+AT+RAIAN AP VYQAAMFDGRFVGF DF Sbjct 61 HLDQLRHEFGDAVAVIGRPAYTYAGFAAAAEATQRAIANRAPAVYQAAMFDGRFVGFIDF 120 Query 120 LIRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVG 179 L+RDG +YRV DTKLARSP VTALLQLAAYADAL HSGVPVA +AEL LGDG +V YR+ Sbjct 121 LVRDGEQYRVVDTKLARSPKVTALLQLAAYADALAHSGVPVAPEAELRLGDGMVVSYRIC 180 Query 180 ELIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMR 239 +LIPVYRSQR+LLQRLLD HYTAGTAVRW D+ V++CFRCPQCTE+LRA+DDLLL+ GMR Sbjct 181 DLIPVYRSQRSLLQRLLDRHYTAGTAVRWQDDEVRSCFRCPQCTEQLRATDDLLLIAGMR 240 Query 240 VRQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPR 299 + QR KLL GITTIAELADH+ PVP L+++AL +LTAQAKLQ++QR+TG PQFEIVDP+ Sbjct 241 ISQRSKLLNVGITTIAELADHSGPVPDLSSSALSELTAQAKLQVQQRNTGTPQFEIVDPQ 300 Query 300 PLTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQ 359 PL LLP+P+PGDLFFDFEGDPLWT DG++WGLEYLFGVL++ +G FRPLWAH+R ER+ Sbjct 301 PLALLPDPDPGDLFFDFEGDPLWTVDGQEWGLEYLFGVLDSEISGTFRPLWAHNRVEERK 360 Query 360 ALTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYP 419 ALT+FL +V +RR++ P+MH+YHYAPYEKTALLRL GRYG+ ED+VD+LLR+G LVDLYP Sbjct 361 ALTEFLKMVTKRRKQRPHMHVYHYAPYEKTALLRLAGRYGVCEDEVDELLRSGTLVDLYP 420 Query 420 LVRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATV 479 LV KSIRVG +SFSLKALEPLY+G Q RSGDVTTA DSI Y RYCEL +AG DEAATV Sbjct 421 LVSKSIRVGAESFSLKALEPLYMGKQLRSGDVTTATDSITCYGRYCELLSAGNFDEAATV 480 Query 480 LKEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSK--- 536 LKEIE YNHYDCRSTR LR+WLL++A+EAGV P+GAQPVP+ + + D D L+++LS Sbjct 481 LKEIEDYNHYDCRSTRELRNWLLLQAYEAGVVPVGAQPVPEGNTVKDDDELSAILSALSG 540 Query 537 FTGDAAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASE 596 FTGD A G+RTPEQTA+AL+AAARGYHRREDKPFWW HFDRLN+PV EW+D+TDVF+A + Sbjct 541 FTGDVAVGDRTPEQTAIALVAAARGYHRREDKPFWWGHFDRLNFPVGEWADNTDVFVADD 600 Query 597 ASVTVDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAA 656 AS+ +DWH PPRARKPQRRVRL G LARG+L VFALY+PPAP M +P RRAAG A Sbjct 601 ASIIIDWHTPPRARKPQRRVRLRGRLARGNLGSAVFALYDPPAPLAMDVHPGRRAAGRAE 660 Query 657 VVETDDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSP 716 VVE DD ++PTEVVIVER G+DGNTF QLPFAL PGPP+ TTALR+SIESTA +A+ P Sbjct 661 VVEADDLSIPTEVVIVERVGNDGNTFHQLPFALTPGPPIATTALRDSIESTATTLAASLP 720 Query 717 QLPSTALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTA 776 QLP TAL+D+LLRR PRT SGA LPR +D V DI AA LDLDSSYLAVHGPPGTGKT+TA Sbjct 721 QLPRTALIDILLRRIPRTHSGATLPRGTDTVADITAAVLDLDSSYLAVHGPPGTGKTHTA 780 Query 777 ARVIAELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGS 836 A VI +LV+ H+WRIGVVAQSHA VENLL+GVI+AGLD QVAKK HD +A WQ IDG+ Sbjct 781 AHVITQLVSNHSWRIGVVAQSHAAVENLLDGVITAGLDARQVAKKRHDRSAPPWQEIDGN 840 Query 837 QYTEFIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLL 896 Y FI D GCVIGGTAWDFAN NRVP SLDLLVIDEAGQFCLANTIAVAPAA NL+L Sbjct 841 DYPTFIADPMGCVIGGTAWDFANRNRVPPGSLDLLVIDEAGQFCLANTIAVAPAAANLML 900 Query 897 LGDPQQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALS 956 LGDPQQLPQVSQGTHPEPV+TSAL WLV+GQ TLP+ERGYFLDRSYRMHPA+CAAVS LS Sbjct 901 LGDPQQLPQVSQGTHPEPVNTSALDWLVEGQRTLPNERGYFLDRSYRMHPAICAAVSTLS 960 Query 957 YEGRLCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDE 1016 YEG+L +HTE TA RRL+ Y PGVH VHH+GNS ESPEEA AI AE+ +LLG+PWTDE Sbjct 961 YEGKLHAHTEYTAARRLNEYQPGVHVLAVHHQGNSTESPEEAGAITAEIERLLGTPWTDE 1020 Query 1017 HGTRPLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMT 1076 HGTRPL SD+LVLAPYNAQVALVR++L SAG GVRVGTVDKFQGGQAPVVFISMT Sbjct 1021 HGTRPLDVSDILVLAPYNAQVALVRQQLMSAGFS---GVRVGTVDKFQGGQAPVVFISMT 1077 Query 1077 ASSADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLT 1136 +SS + VPRGISFLLNRNRLNVAVSRAQYAAVIVRSE LT+YLPATP GL+DLGAFL LT Sbjct 1078 SSSVEVVPRGISFLLNRNRLNVAVSRAQYAAVIVRSETLTEYLPATPVGLIDLGAFLTLT 1137 Query 1137 S 1137 + Sbjct 1138 T 1138 >gi|240172267|ref|ZP_04750926.1| hypothetical protein MkanA1_23331 [Mycobacterium kansasii ATCC 12478] Length=1134 Score = 1756 bits (4549), Expect = 0.0, Method: Compositional matrix adjust. Identities = 892/1137 (79%), Positives = 981/1137 (87%), Gaps = 7/1137 (0%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 +F++ D++VYSASDLA+AARC+YALLR+FDAKLGRGPA V DEL+ARAAVLG+ HE RR Sbjct 1 MFLSDDTLVYSASDLASAARCEYALLRDFDAKLGRGPAAPVADELLARAAVLGNEHERRR 60 Query 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 LD+LR EFGD VA+IGRPAYT AGL AAA ATR AIANHA VVYQAA+FDGRFVGFADFL Sbjct 61 LDRLRDEFGDGVAVIGRPAYTLAGLTAAAAATRHAIANHARVVYQAALFDGRFVGFADFL 120 Query 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 IRDG RYR+ADTKLARSP VTALLQLAAYADAL GVPVA +AELELGDGT+VRYR+ + Sbjct 121 IRDGERYRIADTKLARSPQVTALLQLAAYADALAGCGVPVAPEAELELGDGTVVRYRISD 180 Query 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 LIPVYRSQRA+LQRLLD HY +GTAV WDD V+ACFRCP CTE+LRA+DDLLLV GMRV Sbjct 181 LIPVYRSQRAVLQRLLDNHYASGTAVCWDDPGVRACFRCPLCTEQLRATDDLLLVAGMRV 240 Query 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 QR+KLL+AGITTI +LA+HT PVPGL + LGKLTAQAKLQ+RQR+TG PQ+EIVDP+P Sbjct 241 TQREKLLDAGITTIDKLAEHTQPVPGLAPSVLGKLTAQAKLQVRQRNTGEPQYEIVDPQP 300 Query 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 L LLPEP+ GDLFFDFEGDPLWTADG +WGLEYLFGVLEAG AG F+PLWAHDR ERQA Sbjct 301 LALLPEPDAGDLFFDFEGDPLWTADGHEWGLEYLFGVLEAGPAGAFQPLWAHDRAQERQA 360 Query 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 L DFLA+VA+RRRRHPNMHIYHYAPYEKTALLRL GRYG+GEDD+D+LLRNGVLVDLYPL Sbjct 361 LKDFLALVAKRRRRHPNMHIYHYAPYEKTALLRLAGRYGVGEDDIDELLRNGVLVDLYPL 420 Query 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 VRKS+R G +SFSLKALEPLY+G + R+G+VTTAADSI YARYC+LRA G DEAA VL Sbjct 421 VRKSLRAGAESFSLKALEPLYMGARLRAGEVTTAADSITCYARYCDLRAEGCTDEAAAVL 480 Query 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 KEIE YNHYDCRSTR LRDWLLMRAWEAGVTPIG QPV D+ ++D D LA+ L+ F GD Sbjct 481 KEIEDYNHYDCRSTRELRDWLLMRAWEAGVTPIGVQPVADSGRVEDHDELAAALATFVGD 540 Query 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 AA RTPEQ VALL+AARGYHRREDKPFWW HFDRLNYP+DEWSDSTDVF+A E SV Sbjct 541 DAATNRTPEQNVVALLSAARGYHRREDKPFWWGHFDRLNYPLDEWSDSTDVFVADETSVV 600 Query 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 WH P RARKPQRRVRLTG LARGDL +VFALY PPAPPG++D+PDRRAAG A VV Sbjct 601 AAWHTPARARKPQRRVRLTGGLARGDLKTSVFALYNPPAPPGISDDPDRRAAGHAEVVGV 660 Query 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 DDP +PTEVVI+ERTGSDGNTF+QLPFAL PGPPVPTT LR+SIE+TA+AVA G P+LP Sbjct 661 DDPGLPTEVVILERTGSDGNTFEQLPFALTPGPPVPTTVLRKSIEATASAVAGGLPRLPR 720 Query 721 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI 780 TAL+DVLLR PPRTR LPR +D V DI A L LD+SY+AVHGPPGTGKT+TAARVI Sbjct 721 TALVDVLLRHPPRTR----LPRGTDIVADITVAVLGLDASYVAVHGPPGTGKTHTAARVI 776 Query 781 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE 840 LV EH+WRIGVVAQSHA VENLL+ VI A LDPG VAKK +D TA RWQ ID Y Sbjct 777 KRLVVEHSWRIGVVAQSHAAVENLLDCVIDADLDPGCVAKKKYDRTAPRWQQIDEKHYPA 836 Query 841 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP 900 FI D AGCVIGGTAWDFAN RVP+ SLDLLVIDEAGQF LANTIAVAPAATN+LLLGDP Sbjct 837 FIADHAGCVIGGTAWDFANEQRVPRGSLDLLVIDEAGQFSLANTIAVAPAATNMLLLGDP 896 Query 901 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 QQLPQVSQGTHPEPVD SAL WLVDGQ TLPDERGYFLDRSYRMHPAVCAAVS LSYEGR Sbjct 897 QQLPQVSQGTHPEPVDASALDWLVDGQRTLPDERGYFLDRSYRMHPAVCAAVSMLSYEGR 956 Query 961 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR 1020 L SH T RR+ GY PGVH V H+GNSIE PEEAEAILAE+ LLG W+DE GTR Sbjct 957 LQSHAACTTARRVAGYQPGVHALSVAHQGNSIECPEEAEAILAEILALLGRSWSDERGTR 1016 Query 1021 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA 1080 PLAASD+LVLAPYNAQV L+R+RL SAGL DG+RVGTVDKFQGGQAPVVFISMTASSA Sbjct 1017 PLAASDLLVLAPYNAQVGLLRQRLRSAGL---DGIRVGTVDKFQGGQAPVVFISMTASSA 1073 Query 1081 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTS 1137 DDVPRG+SFLLNRNRLNVA+SRAQYAAV+VRSE+LTQYLP TP GL+DLGAFL LTS Sbjct 1074 DDVPRGMSFLLNRNRLNVAISRAQYAAVVVRSEILTQYLPTTPAGLIDLGAFLALTS 1130 >gi|118619601|ref|YP_907933.1| hypothetical protein MUL_4495 [Mycobacterium ulcerans Agy99] gi|118571711|gb|ABL06462.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=1135 Score = 1738 bits (4502), Expect = 0.0, Method: Compositional matrix adjust. Identities = 873/1137 (77%), Positives = 972/1137 (86%), Gaps = 4/1137 (0%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 +FV GD +VYSASDLAAAARC++A LR FD+KLGRGPA++ +D+L+ R LG+ HE R Sbjct 1 MFVAGDVVVYSASDLAAAARCEFAFLRHFDSKLGRGPAISAEDDLLVRTTELGNEHERRT 60 Query 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 LD+LR +FG+ +A+IG PAYT GL AAA+AT+RAIA+ APVVYQAAMFDGRFVGFADFL Sbjct 61 LDRLRDQFGE-IAVIGHPAYTLVGLTAAAEATQRAIADRAPVVYQAAMFDGRFVGFADFL 119 Query 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 IRD RYR+ DTKLARSP VTAL+QL AYADAL +GVPVA +A+LELGDGT V +RV + Sbjct 120 IRDRERYRITDTKLARSPKVTALMQLGAYADALTGAGVPVAPEADLELGDGTAVHFRVSD 179 Query 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 LIPVYR+QRA LQRLLD HY A TAV WDD V+ACFRC C E LR DDLLLV GMRV Sbjct 180 LIPVYRAQRAELQRLLDEHYAADTAVCWDDHGVRACFRCELCMEELRRRDDLLLVAGMRV 239 Query 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 QR+KLL+AGITTI LA HT VP L+ NAL KL+AQAK+Q++QRDTGAPQ+EI DP+P Sbjct 240 SQREKLLDAGITTIGGLASHTGAVPELSANALAKLSAQAKVQVQQRDTGAPQYEISDPQP 299 Query 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 L LLPEPNPGDLFFDFEGDPLWTADG +WGLEYLFGVLEAG+ G FRPLWAHDR ER+A Sbjct 300 LALLPEPNPGDLFFDFEGDPLWTADGHEWGLEYLFGVLEAGKKGAFRPLWAHDRRDERKA 359 Query 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 LTDFLA+VA+RR+RHPNMHIYHYAPYEK ALLRL GRYG+GED +DDLLRNGVLVDLYP+ Sbjct 360 LTDFLALVAKRRKRHPNMHIYHYAPYEKKALLRLAGRYGVGEDAIDDLLRNGVLVDLYPV 419 Query 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 VRKS RVG +S SLKALEPLY+G Q RSG+VTTA DSI SYARY +LRA GR+DEAATVL Sbjct 420 VRKSFRVGAESVSLKALEPLYMGAQLRSGEVTTATDSITSYARYSQLRADGRLDEAATVL 479 Query 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 KEIE YNHYDCRSTR LRDWLL+RAWEAGVTPIG QPVP D I+D D LA+ LS F GD Sbjct 480 KEIEDYNHYDCRSTRELRDWLLIRAWEAGVTPIGVQPVPRRDAIEDHDELAATLSDFAGD 539 Query 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 AA+G RT EQTAVALLAAARGYHRREDKPFWW+HFDRLNYP+DEWSDSTDVF+ ASVT Sbjct 540 AASGNRTAEQTAVALLAAARGYHRREDKPFWWSHFDRLNYPIDEWSDSTDVFIVDHASVT 599 Query 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 V WH P RARKPQRRVRLTG+LARGDL +VFALY+PPAPP MT +PD RAAG A +VE Sbjct 600 VTWHTPARARKPQRRVRLTGQLARGDLKTSVFALYQPPAPPSMTADPDLRAAGHAEIVEL 659 Query 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 DDP++PT+VVI+ERTG+DG TFQQLPFAL PGPPVPT ALR+SIE+TAAA A+ P+LP Sbjct 660 DDPSLPTDVVILERTGADGATFQQLPFALTPGPPVPTRALRDSIEATAAAAAAELPRLPR 719 Query 721 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI 780 TAL+DVLLR PPRTRS A LPRS D V DI AA LDLDSSYLAVHGPPGTGKT+TAARVI Sbjct 720 TALIDVLLRCPPRTRSAAPLPRSGDTVADITAAVLDLDSSYLAVHGPPGTGKTHTAARVI 779 Query 781 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE 840 LV EH WR+GVVAQSHATVENLL+ VI AGLDP ++AKK +DH A RWQ ID + Y Sbjct 780 GRLVQEHCWRVGVVAQSHATVENLLDCVIDAGLDPARIAKKRYDHGAPRWQEIDSNHYAA 839 Query 841 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP 900 FI D GCV+GGTAWDFANGNRVP SLDLLV+DEAGQFCLANT+AVAPAA NLLLLGDP Sbjct 840 FIADHPGCVVGGTAWDFANGNRVPPGSLDLLVVDEAGQFCLANTVAVAPAAANLLLLGDP 899 Query 901 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 QQLPQVS+G HPEPVD SAL WLVDGQ TLP+ERGYFLDRS+RMHPAVC AVS LSY G+ Sbjct 900 QQLPQVSEGKHPEPVDVSALEWLVDGQRTLPEERGYFLDRSFRMHPAVCHAVSMLSYAGK 959 Query 961 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR 1020 L SHTERT RRL PPGVH V H+GNSIES EEAEAILA++++LLGSPWTDEHGTR Sbjct 960 LHSHTERTTARRLSASPPGVHVLAVEHQGNSIESAEEAEAILAQIQRLLGSPWTDEHGTR 1019 Query 1021 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA 1080 PLA D+LVLAPYNAQVAL+R+RL SAGL +GVRVGTVDKFQG QAPVVF+SMTASS Sbjct 1020 PLATRDLLVLAPYNAQVALIRQRLLSAGL---NGVRVGTVDKFQGAQAPVVFVSMTASSV 1076 Query 1081 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTS 1137 DDVPRGISFLLNRNRLNVA+SRAQYAAVIVRSELLT+YLP TP GLVDLGAFL LT Sbjct 1077 DDVPRGISFLLNRNRLNVAISRAQYAAVIVRSELLTRYLPGTPAGLVDLGAFLALTE 1133 >gi|183984163|ref|YP_001852454.1| hypothetical protein MMAR_4191 [Mycobacterium marinum M] gi|183177489|gb|ACC42599.1| conserved hypothetical protein [Mycobacterium marinum M] Length=1138 Score = 1713 bits (4436), Expect = 0.0, Method: Compositional matrix adjust. Identities = 871/1128 (78%), Positives = 967/1128 (86%), Gaps = 4/1128 (0%) Query 10 YSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRRLDQLRHEFG 69 YSASDLAAAARC++A LR FD+KLGRGPA++ +D+L+AR LG+ HE R LD+LR +FG Sbjct 13 YSASDLAAAARCEFAFLRHFDSKLGRGPAISAEDDLLARTTELGNEHERRTLDRLRDQFG 72 Query 70 DAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFLIRDGHRYRV 129 + +A+IG PAYT AGL AAA+AT+RAIA+ APVVYQAAMFDGRFVGFADFLIRD RYR+ Sbjct 73 E-IAVIGHPAYTLAGLTAAAEATQRAIADRAPVVYQAAMFDGRFVGFADFLIRDRERYRI 131 Query 130 ADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGELIPVYRSQR 189 DTKLARSP VTAL+QL AYADAL +GVPVA +A+LELGDGT+V +RV +LIPVYR+QR Sbjct 132 TDTKLARSPKVTALMQLGAYADALTGAGVPVAPEADLELGDGTVVHFRVSDLIPVYRAQR 191 Query 190 ALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRVRQRDKLLEA 249 A LQRLLD HY A TAV WDD V+ACFRC C E LR DDLLLV GMRV QR+KLL+A Sbjct 192 AELQRLLDEHYAADTAVCWDDHGVRACFRCELCMEELRRRDDLLLVAGMRVSQREKLLDA 251 Query 250 GITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRPLTLLPEPNP 309 GITTI LA HT VP L+ NAL KL AQAK+Q++QRDT PQ+EI DP+PL LLPEPNP Sbjct 252 GITTIGGLASHTGAVPELSANALAKLAAQAKVQVQQRDTSTPQYEISDPQPLALLPEPNP 311 Query 310 GDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQALTDFLAIVA 369 GDLFFDFEGDPLWTADG +WGLEYLFGVLEAG+ G FRPLWAHDR ER+ALTDFLA+VA Sbjct 312 GDLFFDFEGDPLWTADGHEWGLEYLFGVLEAGKKGAFRPLWAHDRRDERKALTDFLALVA 371 Query 370 RRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPLVRKSIRVGT 429 +RR+RHPNMHIYHYAPYEKTALLRL GRYG+GED +DDLLRNGVLVDLYP+VRKS RVG Sbjct 372 KRRKRHPNMHIYHYAPYEKTALLRLAGRYGVGEDAIDDLLRNGVLVDLYPVVRKSFRVGA 431 Query 430 DSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVLKEIEGYNHY 489 +S SLKALEPLY+G Q RSG+VTTA DSI SYARY +LRA GR+DEAATVLKEIE YNHY Sbjct 432 ESVSLKALEPLYMGAQLRSGEVTTATDSITSYARYSQLRADGRLDEAATVLKEIEDYNHY 491 Query 490 DCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGDAAAGERTPE 549 DCRSTR LRDWLL+RAWEAGVTPIG QPVP D I+D D LA+ LS F GDAAAG RT E Sbjct 492 DCRSTRELRDWLLIRAWEAGVTPIGVQPVPRRDAIEDHDELAATLSDFAGDAAAGNRTAE 551 Query 550 QTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVTVDWHMPPRA 609 QTAVALLAAARGYHRREDKPFWW+HFDRLNYP+DEWSDSTDVF+ ASVTV WH P RA Sbjct 552 QTAVALLAAARGYHRREDKPFWWSHFDRLNYPIDEWSDSTDVFIVDHASVTVTWHTPARA 611 Query 610 RKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVETDDPTVPTEV 669 RKPQRRVRLTGELARGDL +VFALY+PPAPP MT +PD RAAG A +VE DDP++PT+V Sbjct 612 RKPQRRVRLTGELARGDLKTSVFALYQPPAPPSMTADPDLRAAGHAEIVELDDPSLPTDV 671 Query 670 VIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPSTALMDVLLR 729 VI+ERTG+DG TFQQLPFAL PGPPVPT ALR+SIE+TAAA A+ P+LP TAL+DVLLR Sbjct 672 VILERTGADGATFQQLPFALTPGPPVPTRALRDSIEATAAAAAAELPRLPRTALIDVLLR 731 Query 730 RPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVIAELVTEHAW 789 PPRTRS A LPRS + V DI AA LDLDSSYLAVHGPPGTGKT+TAARVI LV EH W Sbjct 732 CPPRTRSAAPLPRSGNTVADITAAVLDLDSSYLAVHGPPGTGKTHTAARVIGRLVQEHCW 791 Query 790 RIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTEFIRDTAGCV 849 R+GVVAQSHATVENLL+ VI AGLDP ++AKK +DH A RWQ IDG+ Y FI D GCV Sbjct 792 RVGVVAQSHATVENLLDCVIDAGLDPARIAKKRYDHGAPRWQEIDGNHYAAFIADHPGCV 851 Query 850 IGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDPQQLPQVSQG 909 +GGTAWDFANGNRVP SLDLLV+DEAGQFCLANT+AVAPAA NLLLLGDPQQLPQVSQG Sbjct 852 VGGTAWDFANGNRVPPGSLDLLVVDEAGQFCLANTVAVAPAAANLLLLGDPQQLPQVSQG 911 Query 910 THPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGRLCSHTERTA 969 HPEPVD SAL WLVDGQ TLP+ERGYFLDRS+RMHPAVC AVS LSY G+L SHTERT Sbjct 912 KHPEPVDVSALEWLVDGQRTLPEERGYFLDRSFRMHPAVCHAVSMLSYAGKLHSHTERTT 971 Query 970 VRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTRPLAASDVLV 1029 RRL PPGVH V H+GNSIES EEAEAILA++++LLGSPWTDEHGTRPLA D+LV Sbjct 972 ARRLSASPPGVHVLAVEHQGNSIESAEEAEAILAQIQRLLGSPWTDEHGTRPLATHDLLV 1031 Query 1030 LAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSADDVPRGISF 1089 LAPYNAQVAL+R+RL SAGL +GVRVGTVDKFQG QAPVVF+SMTAS+ DDVPRGISF Sbjct 1032 LAPYNAQVALIRQRLLSAGL---NGVRVGTVDKFQGAQAPVVFVSMTASAVDDVPRGISF 1088 Query 1090 LLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTS 1137 LLNRNRLNVA+SRAQYAAVIVRSELLT+YLP TP GLVDLGAFL LT Sbjct 1089 LLNRNRLNVAISRAQYAAVIVRSELLTRYLPGTPAGLVDLGAFLALTE 1136 >gi|41408631|ref|NP_961467.1| hypothetical protein MAP2533 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396989|gb|AAS04850.1| hypothetical protein MAP_2533 [Mycobacterium avium subsp. paratuberculosis K-10] Length=1140 Score = 1705 bits (4416), Expect = 0.0, Method: Compositional matrix adjust. Identities = 874/1137 (77%), Positives = 973/1137 (86%), Gaps = 4/1137 (0%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 VFVTGDSIVYSASDLAAAARC++ALLR+FDAKLGRGPAV V+D+L+ R A LG+ HE R Sbjct 4 VFVTGDSIVYSASDLAAAARCEFALLRDFDAKLGRGPAVTVEDDLLIRTATLGAEHERRE 63 Query 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 L +LR FGDAVA+IGRPAYTPA L AA++ATRRA+A+ APV+YQAAMFDGRF+GFADFL Sbjct 64 LARLRERFGDAVAVIGRPAYTPAALTAASEATRRAVADRAPVIYQAAMFDGRFLGFADFL 123 Query 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 +RDG RY+V DTKLARS VTALLQLAAYADAL +GVPVA +AEL LGDGT VR+RV + Sbjct 124 VRDGERYQVVDTKLARSEKVTALLQLAAYADALAAAGVPVAPEAELRLGDGTAVRHRVCD 183 Query 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 L+PVYRS RA LQRLLD H G AVRWDDE V ACFRC C E+LRA+DD+LLV GMRV Sbjct 184 LVPVYRSARARLQRLLDEHRAGGAAVRWDDENVTACFRCAVCVEQLRATDDVLLVAGMRV 243 Query 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 QRDKL +AGI+T+AELA H PVP L + KLTAQAKLQ+R+R+TG PQ EIVDP+P Sbjct 244 SQRDKLFDAGISTVAELAAHRGPVPELAARVVAKLTAQAKLQVRERETGVPQVEIVDPQP 303 Query 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 L LLPEP+PGDLFFDFEGDPLWTADG++WGLEYLFGVLEAG +G FRPLWAH+R ER+A Sbjct 304 LALLPEPDPGDLFFDFEGDPLWTADGREWGLEYLFGVLEAGPSGRFRPLWAHNRAEERKA 363 Query 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 LTDFLA+VA RRRR PNMHIYHYAPYEKTALLRL GRYG+GED VD+LLR+G LVDLYPL Sbjct 364 LTDFLALVANRRRRRPNMHIYHYAPYEKTALLRLAGRYGVGEDQVDELLRSGTLVDLYPL 423 Query 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 VR+SIRVG DSFSLKALEPLY+G++ R+G+VTTAA SI SYARYCEL+A GR DEA VL Sbjct 424 VRRSIRVGADSFSLKALEPLYMGSRLRAGEVTTAAGSITSYARYCELQADGRADEAVAVL 483 Query 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 KEIE YNHYDCRST+ LR+WL++RA+E+GV P+GAQPV D + +DD D LA+ LS FTG Sbjct 484 KEIEDYNHYDCRSTQELRNWLMLRAYESGVLPVGAQPVGDGNTVDDRDELAATLSAFTGA 543 Query 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 A ERTP+QTAVALLAAARGYHRREDKPFWWAHFDRLN+P+DEW+D+TDVF+A +ASV Sbjct 544 AGIDERTPQQTAVALLAAARGYHRREDKPFWWAHFDRLNFPIDEWADNTDVFVAEQASVC 603 Query 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 VDW P RARKPQRRVRL GELARG+L VFALY+PPAPPGMTDNPDRRAAG A VVE Sbjct 604 VDWQTPARARKPQRRVRLRGELARGELRTEVFALYDPPAPPGMTDNPDRRAAGRATVVEA 663 Query 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 DDP +PTEVV++ER SDG F QLPFAL PGPP+PTTALR+SIE+T AAVA+G P+LP Sbjct 664 DDPALPTEVVVLERVTSDGKPFHQLPFALTPGPPIPTTALRDSIEATVAAVAAGLPRLPD 723 Query 721 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI 780 +A++DVLLRR PRTRSGAALPRS+D V DIA+A DLDSSYLAVHGPPGTGKT+TAARVI Sbjct 724 SAVVDVLLRRAPRTRSGAALPRSADTVADIASALTDLDSSYLAVHGPPGTGKTHTAARVI 783 Query 781 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE 840 LV EH WR+GVVAQSHATVENLL+ VI AGLDP ++AKK +D A RWQ IDG+ Y Sbjct 784 VRLVAEHRWRVGVVAQSHATVENLLDCVIDAGLDPRRIAKKRYDRQAPRWQEIDGNAYAA 843 Query 841 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP 900 F+ DT GCVIGGTAWDFAN NR+P SLDLLVIDEAGQFCLANTIAVAPAA NLLLLGDP Sbjct 844 FLADTPGCVIGGTAWDFANANRIPPGSLDLLVIDEAGQFCLANTIAVAPAAANLLLLGDP 903 Query 901 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 QQLPQVSQGTHPEPVDTSAL WLV GQ TLPDERGYFLDRSYRMHPAVCAAVSALSYEGR Sbjct 904 QQLPQVSQGTHPEPVDTSALDWLVVGQRTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 963 Query 961 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR 1020 L S TA RRLDG PPGV V H+GNS ESPEEA+AI A + LLG+ WTDEHGTR Sbjct 964 LHSDAC-TAARRLDGCPPGVRLLSVDHQGNSTESPEEADAIAAAVTGLLGASWTDEHGTR 1022 Query 1021 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA 1080 L ASDVLVLAPYNAQVAL+RRRL SAGL DGVRVGTVDKFQGGQAPVVFISMTASS Sbjct 1023 ALTASDVLVLAPYNAQVALLRRRLGSAGL---DGVRVGTVDKFQGGQAPVVFISMTASSV 1079 Query 1081 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTS 1137 D VPRGISFLLNRNRLNVAVSRAQYAAVIVRS LT+YLP TP GL++LGAFL LT Sbjct 1080 DVVPRGISFLLNRNRLNVAVSRAQYAAVIVRSPTLTEYLPGTPAGLIELGAFLALTQ 1136 >gi|118465360|ref|YP_880631.1| ATPase [Mycobacterium avium 104] gi|118166647|gb|ABK67544.1| ATPase [Mycobacterium avium 104] Length=1137 Score = 1704 bits (4414), Expect = 0.0, Method: Compositional matrix adjust. Identities = 872/1137 (77%), Positives = 973/1137 (86%), Gaps = 4/1137 (0%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 +FVTGDSIVYSASDLAAAARC++ALLR+FDAKLGRGPAV V+D+L+ R A LG+ HE R Sbjct 1 MFVTGDSIVYSASDLAAAARCEFALLRDFDAKLGRGPAVTVEDDLLIRTATLGAEHERRE 60 Query 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 L +LR FGDAVA+IGRPAYTPA L AA++ATRRA+A+ APV+YQAAMFDGRF+GFADFL Sbjct 61 LARLRERFGDAVAVIGRPAYTPAALTAASEATRRAVADRAPVIYQAAMFDGRFLGFADFL 120 Query 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 +RDG RY+V DTKLARS VTALLQLAAYADAL +GVPVA +AEL LGDGT VR+RV + Sbjct 121 VRDGERYQVVDTKLARSEKVTALLQLAAYADALAAAGVPVAPEAELRLGDGTAVRHRVCD 180 Query 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 L+PVYRS RA LQRLLD H G AVRWDDE V ACFRC C E+LRA+DD+LLV GMRV Sbjct 181 LVPVYRSARARLQRLLDEHRAGGAAVRWDDENVTACFRCAVCVEQLRATDDVLLVAGMRV 240 Query 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 QRDKL +AGI+T+AELA H PVP L + KLTAQAKLQ+R+R+TG PQ EIVDP+P Sbjct 241 SQRDKLFDAGISTVAELAAHRGPVPELAAGVVAKLTAQAKLQVRERETGVPQVEIVDPQP 300 Query 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 L LLPEP+PGDLFFDFEGDPLWTADG++WGLEYLFGVLEAG +G FRPLWAH+R+ ER+A Sbjct 301 LALLPEPDPGDLFFDFEGDPLWTADGREWGLEYLFGVLEAGPSGRFRPLWAHNRSEERKA 360 Query 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 LTDFLA+VA RRRR PNMHIYHYAPYEKTALLRL GRYG+GED VD+LLR+G LVDLYPL Sbjct 361 LTDFLALVANRRRRRPNMHIYHYAPYEKTALLRLAGRYGVGEDQVDELLRSGTLVDLYPL 420 Query 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 VR+SIRVG DSFSLKALEPLY+G++ R+G+VTTAA SI SYARYCEL+A GR DEA VL Sbjct 421 VRRSIRVGADSFSLKALEPLYMGSRLRAGEVTTAAGSITSYARYCELQADGRADEAVAVL 480 Query 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 KEIE YNHYDCRST+ LR+WL++RA+E+GV P+GAQPV D + +DD D L + LS FTG Sbjct 481 KEIEDYNHYDCRSTQELRNWLMLRAYESGVLPVGAQPVGDGNTVDDRDELVATLSAFTGA 540 Query 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 A ERTP+QTAVALLAAARGYHRREDKPFWWAHFDRLN+P+DEW+D+TDVF+A +ASV Sbjct 541 AGIDERTPQQTAVALLAAARGYHRREDKPFWWAHFDRLNFPIDEWADNTDVFVAEQASVC 600 Query 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 VDW P RARKPQRRVRL GELARG+L VFALY+PPAPPGMTDNPDRR AG A VVE Sbjct 601 VDWQTPARARKPQRRVRLRGELARGELRTEVFALYDPPAPPGMTDNPDRRGAGRATVVEA 660 Query 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 DDP +PTEVV++ER SDG F QLPFAL PGPP+PTTALR+SIE+T AAVA+G P+LP Sbjct 661 DDPALPTEVVVLERVTSDGKPFHQLPFALTPGPPIPTTALRDSIEATVAAVAAGLPRLPD 720 Query 721 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI 780 +A++DVLLRR PRTRSGAALPRS+D V DIA+A DLDSSYLAVHGPPGTGKT+TAARVI Sbjct 721 SAVVDVLLRRAPRTRSGAALPRSADTVADIASALTDLDSSYLAVHGPPGTGKTHTAARVI 780 Query 781 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE 840 LV EH WR+GVVAQSHATVENLL+ VI AGLDP ++AKK +D A RWQ IDG+ Y Sbjct 781 VRLVAEHRWRVGVVAQSHATVENLLDCVIDAGLDPRRIAKKRYDRQAPRWQEIDGNAYAA 840 Query 841 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP 900 F+ DT GCVIGGTAWDFAN NR+P SLDLLVIDEAGQFCLANTIAVAPAA NLLLLGDP Sbjct 841 FLADTPGCVIGGTAWDFANANRIPPGSLDLLVIDEAGQFCLANTIAVAPAAANLLLLGDP 900 Query 901 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 QQLPQVSQGTHPEPVDTSAL WLVDGQ TLPDERGYFLDRSYRMHPAVCAAVSALSYEGR Sbjct 901 QQLPQVSQGTHPEPVDTSALDWLVDGQRTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 Query 961 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR 1020 L S TA RRLDG PPGV V H+GNS ESPEEA+AI A + LLG+ WTDEHGTR Sbjct 961 LHSDAC-TAARRLDGCPPGVRLLSVDHQGNSTESPEEADAIAAAVTGLLGASWTDEHGTR 1019 Query 1021 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA 1080 L ASDVLVLAPYNAQVAL+RRRL SAGL DGVRVGTVDKFQGGQAPVVFISMTASS Sbjct 1020 ALTASDVLVLAPYNAQVALLRRRLGSAGL---DGVRVGTVDKFQGGQAPVVFISMTASSV 1076 Query 1081 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTS 1137 D VPRGISFLLNRNRLNVAVSRAQYAAVIVRS LT+YLP TP GL++LGAFL LT Sbjct 1077 DVVPRGISFLLNRNRLNVAVSRAQYAAVIVRSPTLTEYLPGTPAGLIELGAFLALTQ 1133 >gi|254774268|ref|ZP_05215784.1| ATPase [Mycobacterium avium subsp. avium ATCC 25291] Length=1137 Score = 1704 bits (4413), Expect = 0.0, Method: Compositional matrix adjust. Identities = 872/1137 (77%), Positives = 973/1137 (86%), Gaps = 4/1137 (0%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 +FVTGDSIVYSASDLAAAARC++ALLR+FDAKLGRGPAV V+D+L+ R A LG+ HE R Sbjct 1 MFVTGDSIVYSASDLAAAARCEFALLRDFDAKLGRGPAVTVEDDLLIRTATLGAEHERRE 60 Query 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 L +LR FGDAVA+IGRPAYTPA L AA++ATRRA+A+ APV+YQAAMFDGRF+GFADFL Sbjct 61 LARLRERFGDAVAVIGRPAYTPAALTAASEATRRAVADRAPVIYQAAMFDGRFLGFADFL 120 Query 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 +RDG RY+V DTKLARS VTALLQLAAYADAL +GVPVA +AEL LGDGT VR+RV + Sbjct 121 VRDGERYQVVDTKLARSEKVTALLQLAAYADALAAAGVPVAPEAELRLGDGTAVRHRVCD 180 Query 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 L+PVYRS RA LQRLLD H G AVRWDDE V ACFRC C E+LRA+DD+LLV GMRV Sbjct 181 LVPVYRSARARLQRLLDEHRAGGAAVRWDDENVTACFRCAVCVEQLRATDDVLLVAGMRV 240 Query 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 QRDKL +AGI+T+AELA H PVP L + KLTAQAKLQ+R+R+TG PQ EIVDP+P Sbjct 241 SQRDKLFDAGISTVAELAAHRGPVPELAAGVVAKLTAQAKLQVRERETGVPQVEIVDPQP 300 Query 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 L LLPEP+PGDLFFDFEGDPLWTADG++WGLEYLFGVLEAG +G FRPLWAH+R+ ER+A Sbjct 301 LALLPEPDPGDLFFDFEGDPLWTADGREWGLEYLFGVLEAGPSGRFRPLWAHNRSEERKA 360 Query 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 LTDFLA+VA RRRR PNMHIYHYAPYEKTALLRL GRYG+GED VD+LLR+G LVDLYPL Sbjct 361 LTDFLALVANRRRRRPNMHIYHYAPYEKTALLRLAGRYGVGEDQVDELLRSGTLVDLYPL 420 Query 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 VR+SIRVG DSFSLKALEPLY+G++ R+G+VTTAA SI SYARYCEL+A GR DEA VL Sbjct 421 VRRSIRVGADSFSLKALEPLYMGSRLRAGEVTTAAGSITSYARYCELQADGRADEAVAVL 480 Query 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 KEIE YNHYDCRST+ LR+WL++RA+E+GV P+GAQPV D + +DD D L + LS FTG Sbjct 481 KEIEDYNHYDCRSTQELRNWLMLRAYESGVLPVGAQPVGDGNTVDDRDELVATLSAFTGA 540 Query 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 A ERTP+QTAVALLAAARGYHRREDKPFWWAHFDRLN+P+DEW+D+TDVF+A +ASV Sbjct 541 AGIDERTPQQTAVALLAAARGYHRREDKPFWWAHFDRLNFPIDEWADNTDVFVAEQASVC 600 Query 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 VDW P RARKPQRRVRL GELARG+L VFALY+PPAPPGMTDNPDRR AG A VVE Sbjct 601 VDWQTPARARKPQRRVRLRGELARGELRTEVFALYDPPAPPGMTDNPDRRGAGRATVVEA 660 Query 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 DDP +PTEVV++ER SDG F QLPFAL PGPP+PTTALR+SIE+T AAVA+G P+LP Sbjct 661 DDPALPTEVVVLERVTSDGKPFHQLPFALTPGPPIPTTALRDSIEATVAAVAAGLPRLPD 720 Query 721 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI 780 +A++DVLLRR PRTRSGAALPRS+D V DIA+A DLDSSYLAVHGPPGTGKT+TAARVI Sbjct 721 SAVVDVLLRRAPRTRSGAALPRSADTVADIASALKDLDSSYLAVHGPPGTGKTHTAARVI 780 Query 781 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE 840 LV EH WR+GVVAQSHATVENLL+ VI AGLDP ++AKK +D A RWQ IDG+ Y Sbjct 781 VRLVAEHRWRVGVVAQSHATVENLLDCVIDAGLDPRRIAKKRYDRQAPRWQEIDGNAYAA 840 Query 841 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP 900 F+ DT GCVIGGTAWDFAN NR+P SLDLLVIDEAGQFCLANTIAVAPAA NLLLLGDP Sbjct 841 FLADTPGCVIGGTAWDFANANRIPPGSLDLLVIDEAGQFCLANTIAVAPAAANLLLLGDP 900 Query 901 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 QQLPQVSQGTHPEPVDTSAL WLVDGQ TLPDERGYFLDRSYRMHPAVCAAVSALSYEGR Sbjct 901 QQLPQVSQGTHPEPVDTSALDWLVDGQRTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 Query 961 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR 1020 L S TA RRLDG PPGV V H+GNS ESPEEA+AI A + LLG+ WTDEHGTR Sbjct 961 LHSDAC-TAARRLDGCPPGVRLLSVDHQGNSTESPEEADAIAAAVTGLLGASWTDEHGTR 1019 Query 1021 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA 1080 L ASDVLVLAPYNAQVAL+RRRL SAGL DGVRVGTVDKFQGGQAPVVFISMTASS Sbjct 1020 ALTASDVLVLAPYNAQVALLRRRLGSAGL---DGVRVGTVDKFQGGQAPVVFISMTASSV 1076 Query 1081 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTS 1137 D VPRGISFLLNRNRLNVAVSRAQYAAVIVRS LT+YLP TP GL++LGAFL LT Sbjct 1077 DVVPRGISFLLNRNRLNVAVSRAQYAAVIVRSPTLTEYLPGTPAGLIELGAFLALTQ 1133 >gi|336458581|gb|EGO37548.1| RecB family nuclease, putative, TM0106 family [Mycobacterium avium subsp. paratuberculosis S397] Length=1137 Score = 1703 bits (4411), Expect = 0.0, Method: Compositional matrix adjust. Identities = 873/1137 (77%), Positives = 973/1137 (86%), Gaps = 4/1137 (0%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 +FVTGDSIVYSASDLAAAARC++ALLR+FDAKLGRGPAV V+D+L+ R A LG+ HE R Sbjct 1 MFVTGDSIVYSASDLAAAARCEFALLRDFDAKLGRGPAVTVEDDLLIRTATLGAEHERRE 60 Query 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 L +LR FGDAVA+IGRPAYTPA L AA++ATRRA+A+ APV+YQAAMFDGRF+GFADFL Sbjct 61 LARLRERFGDAVAVIGRPAYTPAALTAASEATRRAVADRAPVIYQAAMFDGRFLGFADFL 120 Query 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 +RDG RY+V DTKLARS VTALLQLAAYADAL +GVPVA +AEL LGDGT VR+RV + Sbjct 121 VRDGERYQVVDTKLARSEKVTALLQLAAYADALAAAGVPVAPEAELRLGDGTAVRHRVCD 180 Query 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 L+PVYRS RA LQRLLD H G AVRWDDE V ACFRC C E+LRA+DD+LLV GMRV Sbjct 181 LVPVYRSARARLQRLLDEHRAGGAAVRWDDENVTACFRCAVCVEQLRATDDVLLVAGMRV 240 Query 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 QRDKL +AGI+T+AELA H PVP L + KLTAQAKLQ+R+R+TG PQ EIVDP+P Sbjct 241 SQRDKLFDAGISTVAELAAHRGPVPELAAGVVAKLTAQAKLQVRERETGVPQVEIVDPQP 300 Query 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 L LLPEP+PGDLFFDFEGDPLWTADG++WGLEYLFGVLEAG +G FRPLWAH+R ER+A Sbjct 301 LALLPEPDPGDLFFDFEGDPLWTADGREWGLEYLFGVLEAGPSGRFRPLWAHNRAEERKA 360 Query 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 LTDFLA+VA RRRR PNMHIYHYAPYEKTALLRL GRYG+GED VD+LLR+G LVDLYPL Sbjct 361 LTDFLALVANRRRRRPNMHIYHYAPYEKTALLRLAGRYGVGEDQVDELLRSGTLVDLYPL 420 Query 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 VR+SIRVG DSFSLKALEPLY+G++ R+G+VTTAA SI SYARYCEL+A GR DEA VL Sbjct 421 VRRSIRVGADSFSLKALEPLYMGSRLRAGEVTTAAGSITSYARYCELQADGRADEAVAVL 480 Query 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 KEIE YNHYDCRST+ LR+WL++RA+E+GV P+GAQPV D + +DD D LA+ LS FTG Sbjct 481 KEIEDYNHYDCRSTQELRNWLMLRAYESGVLPVGAQPVGDGNTVDDRDELAATLSAFTGA 540 Query 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 A ERTP+QTAVALLAAARGYHRREDKPFWWAHFDRLN+P+DEW+D+TDVF+A +ASV Sbjct 541 AGIDERTPQQTAVALLAAARGYHRREDKPFWWAHFDRLNFPIDEWADNTDVFVAEQASVC 600 Query 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 VDW P RARKPQRRVRL GELARG+L VFALY+PPAPPGMTDNPDRRAAG A VVE Sbjct 601 VDWQTPARARKPQRRVRLRGELARGELRTEVFALYDPPAPPGMTDNPDRRAAGRATVVEA 660 Query 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 DDP +PTEVV++ER SDG F QLPFAL PGPP+PTTALR+SIE+T AAVA+G P+LP Sbjct 661 DDPALPTEVVVLERVTSDGKPFHQLPFALTPGPPIPTTALRDSIEATVAAVAAGLPRLPD 720 Query 721 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI 780 +A++DVLLRR PRTRSGAALPRS+D V DIA+A DLDSSYLAVHGPPGTGKT+TAARVI Sbjct 721 SAVVDVLLRRAPRTRSGAALPRSADTVADIASALTDLDSSYLAVHGPPGTGKTHTAARVI 780 Query 781 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE 840 LV EH WR+GVVAQSHATVENLL+ VI AGLDP ++AKK +D A RWQ IDG+ Y Sbjct 781 VRLVAEHRWRVGVVAQSHATVENLLDCVIDAGLDPRRIAKKRYDRQAPRWQEIDGNAYAA 840 Query 841 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP 900 F+ DT GCVIGGTAWDFAN NR+P SLDLLVIDEAGQFCLANTIAVAPAA NLLLLGDP Sbjct 841 FLADTPGCVIGGTAWDFANANRIPPGSLDLLVIDEAGQFCLANTIAVAPAAANLLLLGDP 900 Query 901 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 QQLPQVSQGTHPEPVDTSAL WLV GQ TLPDERGYFLDRSYRMHPAVCAAVSALSYEGR Sbjct 901 QQLPQVSQGTHPEPVDTSALDWLVVGQRTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 Query 961 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR 1020 L S TA RRLDG PPGV V H+GNS ESPEEA+AI A + LLG+ WTDEHGTR Sbjct 961 LHSDAC-TAARRLDGCPPGVRLLSVDHQGNSTESPEEADAIAAAVTGLLGASWTDEHGTR 1019 Query 1021 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA 1080 L ASDVLVLAPYNAQVAL+RRRL SAGL DGVRVGTVDKFQGGQAPVVFISMTASS Sbjct 1020 ALTASDVLVLAPYNAQVALLRRRLGSAGL---DGVRVGTVDKFQGGQAPVVFISMTASSV 1076 Query 1081 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTS 1137 D VPRGISFLLNRNRLNVAVSRAQYAAVIVRS LT+YLP TP GL++LGAFL LT Sbjct 1077 DVVPRGISFLLNRNRLNVAVSRAQYAAVIVRSPTLTEYLPGTPAGLIELGAFLALTQ 1133 >gi|296170153|ref|ZP_06851750.1| ATPase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895179|gb|EFG74894.1| ATPase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=1139 Score = 1681 bits (4353), Expect = 0.0, Method: Compositional matrix adjust. Identities = 871/1141 (77%), Positives = 970/1141 (86%), Gaps = 8/1141 (0%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 +FVTGDSIVYSASDLAAAARC+YALLR+FDA+LG GPA D+L+AR A LG+ HE R Sbjct 1 MFVTGDSIVYSASDLAAAARCEYALLRDFDARLGWGPAAPAGDDLLARTAALGNEHERRE 60 Query 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 LD+LR EFG VA+IGRPAYTPAGLAAAADATRRAIA AP VYQAAMFDGRFVGFADFL Sbjct 61 LDRLREEFGAGVAVIGRPAYTPAGLAAAADATRRAIAGGAPAVYQAAMFDGRFVGFADFL 120 Query 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 +RDG RYRV DTKLARS VTALLQLAAYADAL SG+ VA +AEL LGDGT RYRV + Sbjct 121 LRDGERYRVVDTKLARSANVTALLQLAAYADALAASGIAVAPEAELHLGDGTAARYRVHD 180 Query 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 L+PVYRSQRA LQRLLD H+ GTAVRWDD+ V AC RCP CTE+L A+DDLLLV GMRV Sbjct 181 LVPVYRSQRARLQRLLDEHHAGGTAVRWDDDTVGACLRCPLCTEQLHATDDLLLVAGMRV 240 Query 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 QRDKL++AGITT++ LA+H PVP L ALG LT QA+LQ+RQR+TG P +EIVDP+P Sbjct 241 GQRDKLIDAGITTVSALAEHAGPVPDLAPGALGTLTGQARLQVRQRETGRPCYEIVDPQP 300 Query 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 LTLLPEP+PGDLFFDFEGDPLWT DG++WGLEYLFGVLEAG AG FRPLWAH+RT ERQA Sbjct 301 LTLLPEPDPGDLFFDFEGDPLWTVDGREWGLEYLFGVLEAGPAGAFRPLWAHNRTDERQA 360 Query 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 L DFLA+VA+RR+R PNMHIYHYAPYEKTALLRL GRYG+GED VD+LLR+G LVDLYPL Sbjct 361 LADFLALVAKRRKRRPNMHIYHYAPYEKTALLRLAGRYGVGEDQVDELLRSGTLVDLYPL 420 Query 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 VRKSIRVG +S SLKALEPLY+G Q R+GDVTTA SI SYARYCELRA GR DEAA VL Sbjct 421 VRKSIRVGAESVSLKALEPLYMGAQLRAGDVTTATGSITSYARYCELRADGRRDEAAAVL 480 Query 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 KEIE YNHYDCRST+ LR+WL++RA+E+GV P+GAQPV D + ++D D L+ LS FTGD Sbjct 481 KEIEEYNHYDCRSTQELRNWLMLRAYESGVVPVGAQPVRDGNTVEDRDRLSLTLSAFTGD 540 Query 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 AA +RTPEQTAVAL++AARGYHRREDKPFWWAHFDRLN+P++EW+D+TDVF+A ASV+ Sbjct 541 AAVDDRTPEQTAVALVSAARGYHRREDKPFWWAHFDRLNFPLEEWADNTDVFVAEHASVS 600 Query 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 VDWH PPRARKPQRRVRL GELARG+L +VFALY+PPAPPGM+ +PDRRAAG A V+ Sbjct 601 VDWHTPPRARKPQRRVRLRGELARGELMTDVFALYDPPAPPGMSGDPDRRAAGRATVIAA 660 Query 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 DDP +PTEV IVER G+DG F QLPFAL PGPP+PTTALRESIE+TAAAVA+G P+LP Sbjct 661 DDPALPTEVTIVERVGNDGEPFDQLPFALTPGPPIPTTALRESIEATAAAVAAGLPRLPG 720 Query 721 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI 780 +A++DVLLRR PRTRSG+ALPR +D DI A LDLDSSYLAVHGPPGTGKT+TAARVI Sbjct 721 SAVVDVLLRRAPRTRSGSALPRGADIAADITTAVLDLDSSYLAVHGPPGTGKTHTAARVI 780 Query 781 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE 840 L T H WRIGVVAQ+HATVENLL VI AGLDP +VAKK +DH A RWQ ID S Y Sbjct 781 ERLATGHGWRIGVVAQAHATVENLLGCVIDAGLDPARVAKKRNDHHAPRWQEIDSSAYAA 840 Query 841 FIR----DTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLL 896 FI+ DTAGCVIGGTAWDFANG RVP SLDLLVIDEAGQFCLANTIAVAPA+ NLLL Sbjct 841 FIQSWGADTAGCVIGGTAWDFANGKRVPPGSLDLLVIDEAGQFCLANTIAVAPASANLLL 900 Query 897 LGDPQQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALS 956 LGDPQQLPQVSQGTHPEPVDTSAL WLVDG+ TLPDERGYFLDRSYRMHPAVCAAVSAL+ Sbjct 901 LGDPQQLPQVSQGTHPEPVDTSALDWLVDGRRTLPDERGYFLDRSYRMHPAVCAAVSALA 960 Query 957 YEGRLCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDE 1016 YEGRL SH E A R L G PGV T V H GNS ESPEEA+AI E+ +LLG+PWTDE Sbjct 961 YEGRLHSH-ECAAARHLAGLRPGVRTLTVGHHGNSTESPEEADAIAGEIDRLLGAPWTDE 1019 Query 1017 HGTRPLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMT 1076 GTRPL ASDVLVLAPYNAQVAL+RRRL +AGLG G+RVGTVDKFQG QAPVVF+SMT Sbjct 1020 RGTRPLTASDVLVLAPYNAQVALLRRRLTAAGLG---GIRVGTVDKFQGTQAPVVFVSMT 1076 Query 1077 ASSADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLT 1136 ASSAD VPRGISFLLNRNRLNVA+SRAQ+ AVIVR+ LT+YLP TP GL DLGAFL LT Sbjct 1077 ASSADVVPRGISFLLNRNRLNVAISRAQFTAVIVRAGSLTEYLPTTPAGLTDLGAFLALT 1136 Query 1137 S 1137 Sbjct 1137 E 1137 >gi|342862128|ref|ZP_08718771.1| hypothetical protein MCOL_24676 [Mycobacterium colombiense CECT 3035] gi|342130432|gb|EGT83747.1| hypothetical protein MCOL_24676 [Mycobacterium colombiense CECT 3035] Length=1137 Score = 1652 bits (4278), Expect = 0.0, Method: Compositional matrix adjust. Identities = 862/1137 (76%), Positives = 970/1137 (86%), Gaps = 4/1137 (0%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 + V GDSIVYSASDLAAAARC++ALLR+FDAKLGRGPA +V+DEL+AR A LGS HE R Sbjct 1 MLVCGDSIVYSASDLAAAARCEFALLRDFDAKLGRGPAASVEDELLARTAELGSDHERRE 60 Query 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 L LR FG AVA+IGRPAYTPAGL AAADATRRA+A APVVYQAAMFDGRFVGFADFL Sbjct 61 LAALRDRFGQAVAVIGRPAYTPAGLTAAADATRRAVAGRAPVVYQAAMFDGRFVGFADFL 120 Query 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 +RDG RYR+ DTKLARS VTALLQLAAYADAL +G+PVA +AEL LGDGT VR+R+ + Sbjct 121 VRDGDRYRIVDTKLARSAKVTALLQLAAYADALAAAGIPVAPEAELRLGDGTAVRHRLCD 180 Query 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 L+PVYRSQRA LQRLLD H+ G AVRWDDE V ACF CP C E+LRA+DD+LLV GMRV Sbjct 181 LVPVYRSQRARLQRLLDEHFAGGAAVRWDDEGVAACFHCPLCVEQLRAADDVLLVAGMRV 240 Query 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 QRDKL +AGI+T+AELADH PVP L L LT QAKLQ+RQR+TG PQ +++D +P Sbjct 241 SQRDKLFDAGISTVAELADHRGPVPDLAPTVLNNLTIQAKLQVRQRETGVPQVQVIDAQP 300 Query 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 L LLPEP+PGDLFFDFEGDPLWT DG++WGLEYLFGVLEAG G FRPLWAH+R ER+A Sbjct 301 LALLPEPDPGDLFFDFEGDPLWTTDGREWGLEYLFGVLEAGPTGKFRPLWAHNRADERKA 360 Query 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 L DFLA+VA+RR+R PNMHIYHYAPYEKTALLRL GRYG+GED+VD+LLR+G LVDLYPL Sbjct 361 LIDFLALVAKRRKRRPNMHIYHYAPYEKTALLRLAGRYGVGEDEVDELLRSGTLVDLYPL 420 Query 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 VR+SIRVG +S SLKALEPLY+G+Q R+GDVTTA SI SYARYCEL+ GR DEAA+VL Sbjct 421 VRRSIRVGAESVSLKALEPLYMGSQLRAGDVTTATGSITSYARYCELQGDGRGDEAASVL 480 Query 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 KEIE YNHYDCRST+ LR+WL++RA+E+GV PIGAQPVPD + +DD D LA L+ FTG Sbjct 481 KEIEDYNHYDCRSTQELRNWLMLRAYESGVVPIGAQPVPDGNTVDDRDELAVTLADFTGT 540 Query 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 A +RT QTAVALLAAARGYHRREDKPFWWAHFDRLN+P++EW+D+TDVF+ +AS+ Sbjct 541 AGVDDRTAPQTAVALLAAARGYHRREDKPFWWAHFDRLNFPIEEWADNTDVFVIDQASLV 600 Query 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 VDWH PPRARKPQRR+ L GELARGDL +VFALY+PPAPPGMTDNPDRRAAG A+VVE Sbjct 601 VDWHTPPRARKPQRRLLLRGELARGDLKTDVFALYQPPAPPGMTDNPDRRAAGRASVVEA 660 Query 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 DDP VP EVV++ER G DGNTF Q+PFAL PGPP+PTTALR+SIE+TAAAVA+G P LP Sbjct 661 DDPAVPGEVVVLERVGGDGNTFHQMPFALTPGPPIPTTALRDSIEATAAAVAAGLPGLPD 720 Query 721 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVI 780 +A++DVLLRR PR RSGAALPRS D V DI +A LDLDSSYLAVHGPPGTGKT+TAARVI Sbjct 721 SAIVDVLLRRAPRARSGAALPRSGDAVADITSALLDLDSSYLAVHGPPGTGKTHTAARVI 780 Query 781 AELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTE 840 +LVT HAWR+GVVAQSHATVEN+L+ VI AGLDP ++AKK +DH A RW+ IDG Y Sbjct 781 HDLVTNHAWRVGVVAQSHATVENVLDCVIDAGLDPQRIAKKRNDHRAPRWREIDGGTYAA 840 Query 841 FIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDP 900 F+ DT GCVIGGTAWDFAN NR+P SLDLLVIDEAGQFCLANTIAVAPAA NLLLLGDP Sbjct 841 FLADTPGCVIGGTAWDFANANRIPPGSLDLLVIDEAGQFCLANTIAVAPAAANLLLLGDP 900 Query 901 QQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGR 960 QQLPQVSQGTHPEPVDTSAL WLVDGQ TLPDERGYFLD SYRMHPAVCAAVSALSYE R Sbjct 901 QQLPQVSQGTHPEPVDTSALEWLVDGQRTLPDERGYFLDLSYRMHPAVCAAVSALSYEDR 960 Query 961 LCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTR 1020 L H + TA R LDGY PGV V H+GNS ESPEEA+AI+AE+ +LLG+ WTDEHGTR Sbjct 961 LHPH-DCTAARHLDGYLPGVRLLSVEHQGNSTESPEEADAIVAEITRLLGAAWTDEHGTR 1019 Query 1021 PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSA 1080 L A+DVLVLAPYNAQVAL+RRRLA+A DGVRVGTVDKFQGGQAPVVF+SMT SS Sbjct 1020 ALTAADVLVLAPYNAQVALLRRRLAAA---RLDGVRVGTVDKFQGGQAPVVFVSMTVSSM 1076 Query 1081 DDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTS 1137 D VPRGISFLLNRNRLNVAVSRAQYAAV+VRS LT+YLPATP GL+DLGAFL LT Sbjct 1077 DVVPRGISFLLNRNRLNVAVSRAQYAAVLVRSPSLTEYLPATPAGLIDLGAFLALTQ 1133 >gi|289761401|ref|ZP_06520779.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289708907|gb|EFD72923.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=822 Score = 1638 bits (4241), Expect = 0.0, Method: Compositional matrix adjust. Identities = 812/814 (99%), Positives = 812/814 (99%), Gaps = 0/814 (0%) Query 326 GKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQALTDFLAIVARRRRRHPNMHIYHYAP 385 GKQWG YLFGVLEAGRAGVFRPLWAHDRTAERQALTDFLAIVARRRRRHPNMHIYHYAP Sbjct 9 GKQWGPGYLFGVLEAGRAGVFRPLWAHDRTAERQALTDFLAIVARRRRRHPNMHIYHYAP 68 Query 386 YEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPLVRKSIRVGTDSFSLKALEPLYLGTQ 445 YEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPLVRKSIRVGTDSFSLKALEPLYLGTQ Sbjct 69 YEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPLVRKSIRVGTDSFSLKALEPLYLGTQ 128 Query 446 PRSGDVTTAADSINSYARYCELRAAGRIDEAATVLKEIEGYNHYDCRSTRALRDWLLMRA 505 PRSGDVTTAADSINSYARYCELRAAGRIDEAATVLKEIEGYNHYDCRSTRALRDWLLMRA Sbjct 129 PRSGDVTTAADSINSYARYCELRAAGRIDEAATVLKEIEGYNHYDCRSTRALRDWLLMRA 188 Query 506 WEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGDAAAGERTPEQTAVALLAAARGYHRR 565 WEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGDAAAGERTPEQTAVALLAAARGYHRR Sbjct 189 WEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGDAAAGERTPEQTAVALLAAARGYHRR 248 Query 566 EDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVTVDWHMPPRARKPQRRVRLTGELARG 625 EDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVTVDWHMPPRARKPQRRVRLTGELARG Sbjct 249 EDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVTVDWHMPPRARKPQRRVRLTGELARG 308 Query 626 DLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVETDDPTVPTEVVIVERTGSDGNTFQQL 685 DLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVETDDPTVPTEVVIVERTGSDGNTFQQL Sbjct 309 DLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVETDDPTVPTEVVIVERTGSDGNTFQQL 368 Query 686 PFALAPGPPVPTTALRESIESTAAAVASGSPQLPSTALMDVLLRRPPRTRSGAALPRSSD 745 PFALAPGPPVPTTALRESIESTAAAVASGSPQLPSTALMDVLLRRPPRTRSGAALPRSSD Sbjct 369 PFALAPGPPVPTTALRESIESTAAAVASGSPQLPSTALMDVLLRRPPRTRSGAALPRSSD 428 Query 746 PVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVIAELVTEHAWRIGVVAQSHATVENLL 805 PVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVIAELVTEHAWRIGVVAQSHATVENLL Sbjct 429 PVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVIAELVTEHAWRIGVVAQSHATVENLL 488 Query 806 EGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTEFIRDTAGCVIGGTAWDFANGNRVPK 865 EGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTEFIRDTAGCVIGGTAWDFANGNRVPK Sbjct 489 EGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTEFIRDTAGCVIGGTAWDFANGNRVPK 548 Query 866 ASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDPQQLPQVSQGTHPEPVDTSALSWLVD 925 ASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDPQQLPQVSQGTHPEPVDTSALSWLVD Sbjct 549 ASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDPQQLPQVSQGTHPEPVDTSALSWLVD 608 Query 926 GQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGRLCSHTERTAVRRLDGYPPGVHTRGV 985 GQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGRLCSHTERTAVRRLDGYPPGVHTRGV Sbjct 609 GQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGRLCSHTERTAVRRLDGYPPGVHTRGV 668 Query 986 HHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTRPLAASDVLVLAPYNAQVALVRRRLA 1045 HHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTRPLAASDVLVLAPYNAQVALVRRRLA Sbjct 669 HHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTRPLAASDVLVLAPYNAQVALVRRRLA 728 Query 1046 SAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSADDVPRGISFLLNRNRLNVAVSRAQY 1105 SAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSADDVPRGISFLLNRNRLNVAVSRAQY Sbjct 729 SAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSADDVPRGISFLLNRNRLNVAVSRAQY 788 Query 1106 AAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS 1139 AAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS Sbjct 789 AAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS 822 >gi|289442687|ref|ZP_06432431.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289415606|gb|EFD12846.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] Length=787 Score = 1540 bits (3987), Expect = 0.0, Method: Compositional matrix adjust. Identities = 767/769 (99%), Positives = 767/769 (99%), Gaps = 0/769 (0%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR Sbjct 9 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 68 Query 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL Sbjct 69 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 128 Query 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE Sbjct 129 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 188 Query 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV Sbjct 189 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 248 Query 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP Sbjct 249 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 308 Query 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA Sbjct 309 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 368 Query 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL Sbjct 369 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 428 Query 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL Sbjct 429 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 488 Query 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD Sbjct 489 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 548 Query 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT Sbjct 549 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 608 Query 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET Sbjct 609 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 668 Query 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 DDPTVPTEVVIVERT SDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS Sbjct 669 DDPTVPTEVVIVERTRSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 728 Query 721 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPG 769 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGP G Sbjct 729 TALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPSG 777 >gi|289573911|ref|ZP_06454138.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289538342|gb|EFD42920.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] Length=778 Score = 1498 bits (3877), Expect = 0.0, Method: Compositional matrix adjust. Identities = 746/747 (99%), Positives = 747/747 (100%), Gaps = 0/747 (0%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 +FVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR Sbjct 1 MFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 Query 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL Sbjct 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 Query 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE Sbjct 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 Query 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV Sbjct 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 Query 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP Sbjct 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 Query 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA Sbjct 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 Query 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL Sbjct 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 Query 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL Sbjct 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 Query 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD Sbjct 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 Query 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT Sbjct 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 Query 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET Sbjct 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 Query 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS Sbjct 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 Query 721 TALMDVLLRRPPRTRSGAALPRSSDPV 747 TALMDVLLRRPPRTRSGAALPRSSDPV Sbjct 721 TALMDVLLRRPPRTRSGAALPRSSDPV 747 >gi|298524754|ref|ZP_07012163.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298494548|gb|EFI29842.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=1048 Score = 1491 bits (3861), Expect = 0.0, Method: Compositional matrix adjust. Identities = 744/745 (99%), Positives = 745/745 (100%), Gaps = 0/745 (0%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 +FVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR Sbjct 1 MFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 Query 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL Sbjct 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 Query 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE Sbjct 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 Query 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV Sbjct 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 Query 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP Sbjct 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 Query 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA Sbjct 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 Query 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL Sbjct 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 Query 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL Sbjct 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 Query 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD Sbjct 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 Query 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT Sbjct 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 Query 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET Sbjct 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 Query 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS Sbjct 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 Query 721 TALMDVLLRRPPRTRSGAALPRSSD 745 TALMDVLLRRPPRTRSGAALPRSSD Sbjct 721 TALMDVLLRRPPRTRSGAALPRSSD 745 >gi|126436558|ref|YP_001072249.1| RecB family-like nuclease [Mycobacterium sp. JLS] gi|126236358|gb|ABN99758.1| nuclease (RecB family)-like protein [Mycobacterium sp. JLS] Length=1143 Score = 1468 bits (3800), Expect = 0.0, Method: Compositional matrix adjust. Identities = 774/1135 (69%), Positives = 888/1135 (79%), Gaps = 8/1135 (0%) Query 6 DSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRRLDQLR 65 D +YSASDLAAAARC+YALLR FDA+LG GP+VA +DEL+AR A LG HE R LD LR Sbjct 10 DEAIYSASDLAAAARCEYALLRSFDARLGWGPSVATEDELLARTADLGDEHEKRHLDTLR 69 Query 66 HEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFLIRDGH 125 + V +IGRP YT AGL AAA+AT RA+A APV+YQAAMFDGRF GFADFLI +G Sbjct 70 TDSDHNVTVIGRPPYTVAGLTAAAEATTRAVARRAPVIYQAAMFDGRFAGFADFLILEGD 129 Query 126 RYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGELIPVY 185 RY + DTKLARS V ALLQLAAYA+AL +GVPVA + EL LGDG RY + EL+PVY Sbjct 130 RYLLRDTKLARSVKVEALLQLAAYAEALTAAGVPVADEVELVLGDGATARYPLEELLPVY 189 Query 186 RSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRVRQRDK 245 R +RA LQRLLD H GT VRW+DE V+ACFRCP+C+ +RA DDLLLV GMRV QR + Sbjct 190 RPRRAALQRLLDDHLAGGTPVRWEDETVRACFRCPECSIEVRAQDDLLLVAGMRVSQRAR 249 Query 246 LLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRPLTLLP 305 EAGITT+AELA H PVP L + L+AQA+LQ R G P +E+ DP+PL LLP Sbjct 250 FHEAGITTVAELAAHQGPVPELPARTVTALSAQARLQTAPRVDGKPPYEVADPQPLMLLP 309 Query 306 EPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQALTDFL 365 EP+ GDLFFDFEGDPLWT DG +WGLEYLFGVL+ A F PLWAHDR ER+AL DFL Sbjct 310 EPDKGDLFFDFEGDPLWTDDGHEWGLEYLFGVLDT--ADGFHPLWAHDRPQERKALEDFL 367 Query 366 AIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPLVRKSI 425 +V +RR+RHPNMHIYHYA YEKTALLRL GRYG+GED VDDLLR+GVLVDLYPLVRKS Sbjct 368 ELVRKRRKRHPNMHIYHYAAYEKTALLRLAGRYGVGEDAVDDLLRSGVLVDLYPLVRKSF 427 Query 426 RVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVLKEIEG 485 R+GT+++SLK+LEPLY+G Q R+GDVTTAA SI YARYCELRA GR D+AA VLK+IE Sbjct 428 RIGTENYSLKSLEPLYMGGQLRTGDVTTAAASITEYARYCELRAEGRDDDAAVVLKDIED 487 Query 486 YNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGDAAAGE 545 YN YDC STR LRDWL+ RA + V P G QPV D + D+L L ++ GD G Sbjct 488 YNRYDCTSTRKLRDWLVCRAIDCEVPPRGPQPVRDGAEPEPVDALDRTLCRYAGDELEG- 546 Query 546 RTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASE--ASVTVDW 603 RTPEQ+AVA++AAARGYHRREDKPFWW+HFDRLN PVDEW+DSTDVFL A V VDW Sbjct 547 RTPEQSAVAMVAAARGYHRREDKPFWWSHFDRLNNPVDEWADSTDVFLVDPGGAQVEVDW 606 Query 604 HMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVETDDP 663 H PPRARKPQRRVRL+G +A G L+ +++ALYEPPAP G+ D+PDRRAAG VVE + P Sbjct 607 HTPPRARKPQRRVRLSGAMAAGGLSRDMYALYEPPAPAGLGDDPDRRAAGSVTVVECNAP 666 Query 664 TVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPSTAL 723 VPTEVV+VERT DG F QLPFALAPGPP+ TTALRESIE+TAA +A P+LP TA+ Sbjct 667 DVPTEVVVVERTPRDGGVFDQLPFALAPGPPIRTTALRESIEATAADLAERLPRLPETAV 726 Query 724 MDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVIAEL 783 D+LLRRPPRTRSGA LP D I AA LDLDSSYLAVHGPPGTGKT+TAA +IA L Sbjct 727 TDILLRRPPRTRSGAPLPTGPDVSAAITAALLDLDSSYLAVHGPPGTGKTFTAAAIIATL 786 Query 784 VTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTEFIR 843 V H WRIGVVAQSHA VENL GV+ AG+D +VAKK W ++ + + F+ Sbjct 787 VNTHGWRIGVVAQSHAVVENLFRGVMDAGVDAARVAKKRGHGDDANWTVLEEAGFPGFVA 846 Query 844 DTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDPQQL 903 D GCVIGGTAWDFANGNR+P+ LDLLVI+EAGQFCLANTIAVAPAA NLLLLGDPQQL Sbjct 847 DRDGCVIGGTAWDFANGNRIPRGCLDLLVIEEAGQFCLANTIAVAPAAANLLLLGDPQQL 906 Query 904 PQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGRLCS 963 PQVSQGTHPEPVDTSAL WLVDG HTL ERGYFLD S+RMHPAVCAAVS LSY+GRL S Sbjct 907 PQVSQGTHPEPVDTSALGWLVDGAHTLSAERGYFLDVSWRMHPAVCAAVSRLSYDGRLQS 966 Query 964 HTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTRPLA 1023 + T R L+G+ PGVH V H GN+ ESPEEA+AI+A + +LLGS WTDE G+RPLA Sbjct 967 NEAVTTARTLEGWSPGVHEVTVPHDGNATESPEEADAIIARIGRLLGSVWTDEKGSRPLA 1026 Query 1024 ASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSADDV 1083 DV+V+ PYNAQV L+R+RL + L VRVGTVDKFQG QAPVVFISM ASS DDV Sbjct 1027 QDDVMVVTPYNAQVVLLRQRLDAERL---TDVRVGTVDKFQGQQAPVVFISMVASSIDDV 1083 Query 1084 PRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTST 1138 PRGISFLLNRNRLNVA+SRA+YAAV+VRSE LT+YLP+TP GLV+LGAFL L+ + Sbjct 1084 PRGISFLLNRNRLNVAISRAKYAAVVVRSEALTEYLPSTPKGLVELGAFLSLSQS 1138 >gi|108800933|ref|YP_641130.1| RecB family-like nuclease [Mycobacterium sp. MCS] gi|119870073|ref|YP_940025.1| RecB family-like nuclease [Mycobacterium sp. KMS] gi|108771352|gb|ABG10074.1| nuclease (RecB family)-like protein [Mycobacterium sp. MCS] gi|119696162|gb|ABL93235.1| nuclease (RecB family)-like protein [Mycobacterium sp. KMS] Length=1143 Score = 1467 bits (3799), Expect = 0.0, Method: Compositional matrix adjust. Identities = 774/1135 (69%), Positives = 889/1135 (79%), Gaps = 8/1135 (0%) Query 6 DSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRRLDQLR 65 D ++YSASDLAAAARC+YALLR FDA+LG GP+VA +DEL+AR A LG HE R LD LR Sbjct 10 DEVIYSASDLAAAARCEYALLRSFDARLGWGPSVATEDELLARTADLGDEHEKRHLDTLR 69 Query 66 HEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFLIRDGH 125 + V +IGRP YT AGL AAA+AT RA+A APV+YQAAMFDGRF GFADFLI +G Sbjct 70 TDSDHNVTVIGRPPYTVAGLTAAAEATTRAVARRAPVIYQAAMFDGRFAGFADFLILEGD 129 Query 126 RYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGELIPVY 185 RY + DTKLARS V ALLQLAAYA+AL +GVPVA + EL LGDG RY + EL+PVY Sbjct 130 RYLLRDTKLARSVKVEALLQLAAYAEALTAAGVPVADEVELVLGDGATARYPLEELLPVY 189 Query 186 RSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRVRQRDK 245 R +RA LQRLLD H GT VRW+DE V+ACFRCP+C+ +RA DDLLLV GMRV QR + Sbjct 190 RPRRAALQRLLDDHLAGGTPVRWEDETVRACFRCPECSIEVRAQDDLLLVAGMRVSQRAR 249 Query 246 LLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRPLTLLP 305 EAGITT+AELA H PVP L + L+AQA+LQ R G P +E+ DP+PL LLP Sbjct 250 FHEAGITTVAELAAHQGPVPELPARTVTALSAQARLQTAPRVDGKPPYEVADPQPLMLLP 309 Query 306 EPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQALTDFL 365 EP+ GDLFFDFEGDPLWT DG +WGLEYLFGVL+ A F PLWAHDR ER+AL DFL Sbjct 310 EPDKGDLFFDFEGDPLWTDDGHEWGLEYLFGVLDT--ADGFHPLWAHDRPQERKALEDFL 367 Query 366 AIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPLVRKSI 425 +V +RR+RHPNMHIYHYA YEKTALLRL GRYG+GED VDDLLR+GVLVDLYPLVRKS Sbjct 368 ELVRKRRKRHPNMHIYHYAAYEKTALLRLAGRYGVGEDAVDDLLRSGVLVDLYPLVRKSF 427 Query 426 RVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVLKEIEG 485 R+GT+++SLK+LEPLY+G Q R+GDVTTAA SI YARYCELRA GR D+AA VLK+IE Sbjct 428 RIGTENYSLKSLEPLYMGGQLRTGDVTTAAASITEYARYCELRAEGRDDDAAVVLKDIED 487 Query 486 YNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGDAAAGE 545 YN YDC STR LRDWL+ RA + V P G QPV D + D+L L ++ GD G Sbjct 488 YNRYDCTSTRKLRDWLVCRAIDCEVPPRGPQPVRDGAEPEPVDALDRTLCRYAGDELEG- 546 Query 546 RTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASE--ASVTVDW 603 RTPEQ+AVA++AAARGYHRREDKPFWW+HFDRLN PVDEW+DSTDVFL A V VDW Sbjct 547 RTPEQSAVAMVAAARGYHRREDKPFWWSHFDRLNNPVDEWADSTDVFLVDPGGAQVEVDW 606 Query 604 HMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVETDDP 663 H PPRARKPQRR+RL+G +A G L+ +++ALYEPPAP G+ D+PDRRAAG VVE + P Sbjct 607 HTPPRARKPQRRIRLSGVMAAGGLSRDMYALYEPPAPAGLGDDPDRRAAGSVTVVECNAP 666 Query 664 TVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPSTAL 723 VPTEVV+VERT DG F QLPFALAPG P+ TTALRESIE+TAA +A P+LP TA+ Sbjct 667 DVPTEVVVVERTPRDGGVFDQLPFALAPGQPIRTTALRESIEATAADLAERLPRLPETAV 726 Query 724 MDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVIAEL 783 D+LLRRPPRTRSGA LP D I AA LDLDSSYLAVHGPPGTGKT+TAA +IA L Sbjct 727 TDILLRRPPRTRSGAPLPTGPDVSAAITAALLDLDSSYLAVHGPPGTGKTFTAAAIIATL 786 Query 784 VTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTEFIR 843 V H WRIGVVAQSHA VENL GVI AG+D +VAKK W ++ + + F+ Sbjct 787 VNTHGWRIGVVAQSHAVVENLFRGVIDAGVDAARVAKKRGHGDDANWTVLEEAGFPGFVA 846 Query 844 DTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDPQQL 903 D GCVIGGTAWDFANGNR+P+ LDLLVI+EAGQFCLANTIAVAPAA NLLLLGDPQQL Sbjct 847 DHDGCVIGGTAWDFANGNRIPRGCLDLLVIEEAGQFCLANTIAVAPAAANLLLLGDPQQL 906 Query 904 PQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGRLCS 963 PQVSQGTHPEPVD SAL WLVDG HTLP ERGYFLD S+RMHPAVCAAVS LSY+GRL S Sbjct 907 PQVSQGTHPEPVDASALGWLVDGAHTLPAERGYFLDVSWRMHPAVCAAVSRLSYDGRLQS 966 Query 964 HTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTRPLA 1023 + T R L+G+ PGVH V H GN+ ESPEEA+AI+ + +LLGS WTDE+G+RPLA Sbjct 967 NDAVTTARTLEGWSPGVHEVTVPHDGNATESPEEADAIVTRIGRLLGSVWTDENGSRPLA 1026 Query 1024 ASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSADDV 1083 DV+V+ PYNAQV L+R+RL +A L VRVGTVDKFQG QAPVVFISM ASS DDV Sbjct 1027 QDDVMVVTPYNAQVVLLRQRLDAARL---TDVRVGTVDKFQGQQAPVVFISMVASSIDDV 1083 Query 1084 PRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTST 1138 PRGISFLLNRNRLNVA+SRA+YAAVIVRSE LT+YLP+TP GLV+LGAFL L+ + Sbjct 1084 PRGISFLLNRNRLNVAISRAKYAAVIVRSEALTEYLPSTPKGLVELGAFLSLSQS 1138 >gi|120405424|ref|YP_955253.1| RecB family-like nuclease [Mycobacterium vanbaalenii PYR-1] gi|119958242|gb|ABM15247.1| nuclease (RecB family)-like protein [Mycobacterium vanbaalenii PYR-1] Length=1151 Score = 1444 bits (3737), Expect = 0.0, Method: Compositional matrix adjust. Identities = 746/1154 (65%), Positives = 874/1154 (76%), Gaps = 26/1154 (2%) Query 1 VFVTGDS----IVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAH 56 +FV D+ ++YSASDLAAAARC+YALLR FDA+LG GPAV+ DDEL+AR A LG H Sbjct 1 MFVATDADDVRVIYSASDLAAAARCEYALLRSFDARLGWGPAVSADDELLARTATLGDEH 60 Query 57 EGRRLDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGF 116 E R LD+LRH+ VA+IGRP Y+ +GL AAA+ T RAI PVVYQAAMFDGRF GF Sbjct 61 EQRHLDELRHD--TEVAVIGRPRYSVSGLTAAAEQTLRAIERRVPVVYQAAMFDGRFAGF 118 Query 117 ADFLIR----DGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGT 172 ADFLI DG RYR+ DTKLARS V ALLQ+AAY + L +GVPV + +L LGDGT Sbjct 119 ADFLILEDSPDGPRYRLRDTKLARSVKVEALLQMAAYVETLTAAGVPVGPEVDLVLGDGT 178 Query 173 IVRYRVGELIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDL 232 V Y V EL+PVYR +RA LQRLLD H+ G AV W+DE V+ACFRC +C +++RA DDL Sbjct 179 AVSYPVDELLPVYRPRRAALQRLLDEHFAGGRAVAWEDEHVRACFRCAECDKQVRAHDDL 238 Query 233 LLVGGMRVRQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQR--DTG- 289 LLV GMRV QR +LL+AGITT+ ELA H PVP L+T A+ L +QA+LQ+ R + G Sbjct 239 LLVAGMRVSQRARLLDAGITTVQELAAHDGPVPELSTRAVTALKSQARLQLADRVIENGN 298 Query 290 -APQFEIVDPRPLTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRP 348 P +E+VDP+PL +LP+ + GDLFFDFEGDPLWT DG +WGLEYL+GVL A F P Sbjct 299 VKPPYELVDPQPLMVLPDVDKGDLFFDFEGDPLWTTDGHEWGLEYLWGVLSV--ADDFEP 356 Query 349 LWAHDRTAERQALTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDL 408 LWAH+R+ ERQAL DFLA+V +R+RR+P MH+YHYA YEK+ LLRL GRYG+GE +VD+L Sbjct 357 LWAHNRSEERQALKDFLALVRKRKRRYPGMHVYHYAAYEKSTLLRLAGRYGVGEHEVDEL 416 Query 409 LRNGVLVDLYPLVRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELR 468 LR+GVLVDLYPLVRKSIRVGT+++S+K+LEPLY+G + R G+VTTA SI YARYC LR Sbjct 417 LRDGVLVDLYPLVRKSIRVGTENYSIKSLEPLYMGNELRDGEVTTATASITEYARYCALR 476 Query 469 AAGRIDEAATVLKEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVP---DADPID 525 GR DEAATVLKEIE YN YDCRSTR LRDWL+ RA E GV P G PV + D Sbjct 477 DEGRTDEAATVLKEIEEYNRYDCRSTRRLRDWLMARAIECGVPPRGPVPVTAGQEGAAAD 536 Query 526 DGDSLASVLSKFTGDAAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEW 585 D + L KF GD RTPEQ AVA+LAAA+G+H+REDKP+WW HFDR+N PVDEW Sbjct 537 SPDPVDRKLLKFAGDGIE-PRTPEQAAVAMLAAAKGFHKREDKPYWWGHFDRVNNPVDEW 595 Query 586 SDSTDVFLASEASVTVDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTD 645 +D VF+A V DWH PPRARKPQR +RL GE+A G+L ++ALY+PP+P G++D Sbjct 596 ADDGGVFVAERHEVVADWHQPPRARKPQRHLRLFGEIATGELGREMYALYDPPSPAGLSD 655 Query 646 NPDRRAAGPAAVVETDDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIE 705 +PDRRA G V E DDP PTEVVIVER G+ F Q PFAL PGPP+ T L+++I Sbjct 656 DPDRRAFGSVTVTECDDPEAPTEVVIVERQPKGGDVFPQAPFALTPGPPISTAQLQDAIA 715 Query 706 STAAAVASGSPQLPSTALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVH 765 TAA VA+G P LP+ L D+LLRRPPRTRSG LPR+ D V DI AA LDLDSSYLAVH Sbjct 716 DTAALVAAGLPNLPADGLTDILLRRPPRTRSGGPLPRTGDAVADITAALLDLDSSYLAVH 775 Query 766 GPPGTGKTYTAARVIAELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHD- 824 GPPGTGKT+T+A+VIA LV H W +GVVAQSHA VENL V+ AG+D ++ KK H Sbjct 776 GPPGTGKTHTSAQVIATLVGRHGWTVGVVAQSHAVVENLFTDVMRAGVDGTRIGKKAHTA 835 Query 825 HT-AGRWQSIDGSQYTEFIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLAN 883 HT +G W +D Y EF+R GCV+GGTAWDFAN N+ + LDLLVI+EAGQF LAN Sbjct 836 HTVSGGWTELDRDDYAEFLRQD-GCVVGGTAWDFANDNKFTRGCLDLLVIEEAGQFSLAN 894 Query 884 TIAVAPAATNLLLLGDPQQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYR 943 T+AV+ AA NLLLLGDPQQLPQVSQGTHPEPVD SAL WLVDG HTLP ERGYFLDRSYR Sbjct 895 TVAVSRAARNLLLLGDPQQLPQVSQGTHPEPVDGSALGWLVDGHHTLPPERGYFLDRSYR 954 Query 944 MHPAVCAAVSALSYEGRLCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILA 1003 MHP VC AVS LSY+GRL S+ TA RRLDG PGV T V H GN+ ESPEEA+AI+ Sbjct 955 MHPDVCRAVSRLSYDGRLLSNEHVTAARRLDGVTPGVRTLEVDHLGNATESPEEADAIVT 1014 Query 1004 ELRQLLGSPWTDEHGTRPLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKF 1063 + LL +PWTDE GTRPLA DVL++ PYNAQV LVRRRL +AGL VR GTVDKF Sbjct 1015 AITGLLATPWTDEGGTRPLAQRDVLIVTPYNAQVVLVRRRLDAAGL---TEVRAGTVDKF 1071 Query 1064 QGGQAPVVFISMTASSADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATP 1123 QG QAPVVF+SMTASS DDVPRGI+FLLNRNRLNVAVSRA+Y AVIVRS+ LT YLP TP Sbjct 1072 QGQQAPVVFVSMTASSIDDVPRGIAFLLNRNRLNVAVSRAKYLAVIVRSQHLTDYLPGTP 1131 Query 1124 DGLVDLGAFLGLTS 1137 DGLV LGAFL L + Sbjct 1132 DGLVQLGAFLSLAT 1145 >gi|118471145|ref|YP_889294.1| ATPase [Mycobacterium smegmatis str. MC2 155] gi|118172432|gb|ABK73328.1| ATPase [Mycobacterium smegmatis str. MC2 155] Length=1149 Score = 1426 bits (3692), Expect = 0.0, Method: Compositional matrix adjust. Identities = 748/1147 (66%), Positives = 866/1147 (76%), Gaps = 21/1147 (1%) Query 1 VFVTGDS-----IVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSA 55 +FVT D ++YSASDLAAAARC+YALLR FDA+LGRGPAV+ +DEL+ R A LG Sbjct 1 MFVTEDGGSGPRVIYSASDLAAAARCEYALLRAFDAQLGRGPAVSSEDELLKRTAQLGGE 60 Query 56 HEGRRLDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVG 115 HE R LD+LR G + +IGRP YT GL AAA+AT A+ APV+YQAAMFDGRF G Sbjct 61 HEQRHLDELRE--GSEITVIGRPRYTVPGLTAAANATLAAVTQRAPVIYQAAMFDGRFAG 118 Query 116 FADFLIRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVR 175 FADFLI +YR+ DTKLARS V ALLQLAAY++ L +GVPVA + EL LGDG + Sbjct 119 FADFLILSDGQYRLRDTKLARSVKVEALLQLAAYSETLSAAGVPVAPEVELVLGDGAVAT 178 Query 176 YRVGELIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLV 235 Y V EL+PVYR +RA L+ LLD H +G V W+D ++ACFRCP+C ++RA DDLLLV Sbjct 179 YPVDELLPVYRPRRAALEHLLDAHLASGEPVSWEDTEIRACFRCPECEVQVRAHDDLLLV 238 Query 236 GGMRVRQRDKLLEAGITTIAELADH--TAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQF 293 GMR QR +L++AGITT+A+LA PV GL LTAQA+LQ R P + Sbjct 239 AGMRTSQRARLIDAGITTVADLAARRDDEPVEGLHPRIAQGLTAQARLQRAPRTGKKPPY 298 Query 294 EIVDPRPLTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVL-EAGRAGV-FRPLWA 351 E+VDP+PL LP P+ GDLFFDFEGDPLWT DG QWGLEY+FGVL A RA F PLWA Sbjct 299 EVVDPQPLMSLPNPDRGDLFFDFEGDPLWTDDGVQWGLEYMFGVLGTAPRADEDFHPLWA 358 Query 352 HDRTAERQALTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRN 411 H+R ERQAL DFLA+V +RR+RHP+MH+YHYA YEKTALLRL GRYG GED+VD+LLR Sbjct 359 HNRREERQALRDFLALVRKRRKRHPHMHVYHYAAYEKTALLRLAGRYGEGEDEVDELLRA 418 Query 412 GVLVDLYPLVRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAG 471 GVLVDLYPLVRKSIRVGT+++SLK+LEPLY+G Q R GDVTTA DSI Y YC LRA G Sbjct 419 GVLVDLYPLVRKSIRVGTENYSLKSLEPLYMGAQLRDGDVTTATDSITQYGLYCTLRAEG 478 Query 472 RIDEAATVLKEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLA 531 R DEAA VLKEIE YN YDC STR LRDWL+ RA E V P+GAQPV + D +A Sbjct 479 RDDEAALVLKEIEDYNLYDCVSTRKLRDWLINRAIECSVPPLGAQPVGRDTAPEPEDQIA 538 Query 532 SVLSKFTGDAAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDV 591 L +F GD ERTP+Q AVA++AAARGYHRREDKPFWW+HFDRLN+PV+EWSD V Sbjct 539 RTLRRFVGD---DERTPQQQAVAMIAAARGYHRREDKPFWWSHFDRLNHPVEEWSDGAGV 595 Query 592 FLASEASVTVDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRA 651 F+A A V VDWH PPRARKPQR VRLTG +A G+L+ ++ALYEPPAP G+TD+P+RRA Sbjct 596 FVADTAHVEVDWHTPPRARKPQRWVRLTGAMAAGELSREMYALYEPPAPSGLTDDPERRA 655 Query 652 AGPAAVVETDDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAV 711 G V+E DD + PTEV+I ER +G TF QLPFAL PGPP+ TTAL+ SIE+TAA + Sbjct 656 FGSVQVLEADDASAPTEVLICEREPKEGGTFHQLPFALTPGPPIRTTALQNSIEATAAQI 715 Query 712 ASGSPQLPSTALMDVLLRRPPRTRSGAALPRSSDPVTD-IAAAALDLDSSYLAVHGPPGT 770 A G P+LP A++D+LLRRPPRTRSG LP + I AA LDLDSSYLAVHGPPGT Sbjct 716 AEGLPRLPGNAVVDILLRRPPRTRSGGPLPHGQAAKHELITAALLDLDSSYLAVHGPPGT 775 Query 771 GKTYTAARVIAELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRW 830 GKT+T+A VIA LV H WRIGVVAQ+HA VENL VI+A + VAKKPH A W Sbjct 776 GKTFTSAAVIARLVNRHHWRIGVVAQAHAVVENLFRDVIAADVPADAVAKKPHGDNAC-W 834 Query 831 QSIDGSQYTEFI--RDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVA 888 + +Y +F+ GCVIGGTAWDFAN R+P SLDLLV++EAGQ+ LANTIAVA Sbjct 835 TELSEKEYPDFLDQHTGTGCVIGGTAWDFANPVRIPPGSLDLLVVEEAGQYSLANTIAVA 894 Query 889 PAATNLLLLGDPQQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAV 948 PAA NLLLLGDPQQLPQVSQGTHPEPVDTSAL WLVDG HTLP E GYFLD SYRMHPAV Sbjct 895 PAAHNLLLLGDPQQLPQVSQGTHPEPVDTSALGWLVDGHHTLPAELGYFLDCSYRMHPAV 954 Query 949 CAAVSALSYEGRLCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQL 1008 CAAVS LSY+ RL S + TA R LDG PGVH V H GN+ +SPEEA+ I+AE+R+L Sbjct 955 CAAVSRLSYDNRLRSVDDVTAARHLDGQEPGVHVLLVDHDGNATDSPEEAQVIVAEIRRL 1014 Query 1009 LGSPWTDEHGTRPLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQA 1068 LG+ WTDE GT PL VLV+ PYNAQV +RR L +AGL VRVGTVDKFQG QA Sbjct 1015 LGAAWTDERGTVPLGQDHVLVVTPYNAQVVTMRRYLDAAGL---TDVRVGTVDKFQGQQA 1071 Query 1069 PVVFISMTASSADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVD 1128 PVVFISM ASS DDVPRGISFLLNRNRLNVAVSRA+YAAVIVRS LT+YLP+TP G+V+ Sbjct 1072 PVVFISMVASSVDDVPRGISFLLNRNRLNVAVSRAKYAAVIVRSAALTEYLPSTPAGVVE 1131 Query 1129 LGAFLGL 1135 LGAFL L Sbjct 1132 LGAFLAL 1138 >gi|315443278|ref|YP_004076157.1| nuclease (RecB family) [Mycobacterium sp. Spyr1] gi|315261581|gb|ADT98322.1| predicted nuclease (RecB family) [Mycobacterium sp. Spyr1] Length=1163 Score = 1409 bits (3648), Expect = 0.0, Method: Compositional matrix adjust. Identities = 720/1147 (63%), Positives = 860/1147 (75%), Gaps = 25/1147 (2%) Query 6 DSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRRLDQLR 65 D +++SASDLAAAARC+YALLR FD +LGRGPAV+ DDEL+AR A LG HE R LD+L Sbjct 10 DRVIFSASDLAAAARCEYALLRSFDDRLGRGPAVSGDDELLARTATLGDEHEKRHLDEL- 68 Query 66 HEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFLIR--- 122 V +IGRPAYT AGL A + T RA+ + +PV+YQAAMFDGRF GFADFLI Sbjct 69 -ALSTEVTVIGRPAYTVAGLTDATEQTLRAVESRSPVIYQAAMFDGRFAGFADFLILEDG 127 Query 123 -DGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGEL 181 DG RYR+ DTKLARS V ALLQ+AAY + L +GVPVA + +L LGDGT Y V EL Sbjct 128 PDGQRYRLRDTKLARSVKVEALLQMAAYVETLTAAGVPVAPEIDLVLGDGTAASYHVDEL 187 Query 182 IPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRVR 241 +PVYR +R LQRLLD H G AVRW+DE ++ACFRC +C ++RA DDLLLV GMRV Sbjct 188 LPVYRPRRDALQRLLDDHLAGGRAVRWEDEHIRACFRCAECDTQVRARDDLLLVAGMRVS 247 Query 242 QRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQR--DTGA--PQFEIVD 297 R++L++AGITT+ +LA H PV L+ + LTAQA+LQI R + GA P +EIVD Sbjct 248 ARERLIDAGITTVHDLAAHRGPVAELSPRTVTALTAQARLQIAHRVIENGAEKPPYEIVD 307 Query 298 PRPLTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAE 357 +PL +LP+ + GDLFFDFEGDPLW DG+ WGLEYL+GVL G G F+P WAHDRT E Sbjct 308 AQPLMVLPDADRGDLFFDFEGDPLWNTDGRDWGLEYLWGVLTVG--GDFQPFWAHDRTEE 365 Query 358 RQALTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDL 417 RQAL DFL V +RR R+P MHIYHYA YEK+ALLRL GRYG+GE +VD+LLR+GVLVDL Sbjct 366 RQALQDFLKFVRKRRNRYPGMHIYHYAAYEKSALLRLAGRYGVGEHEVDELLRDGVLVDL 425 Query 418 YPLVRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAA 477 YPLVRKSIRVGT+++S+K+LEPLY+G + R GDVTTA SI YA YCELR G +EAA Sbjct 426 YPLVRKSIRVGTENYSIKSLEPLYMGNELRDGDVTTATASITEYAHYCELRDDGNAEEAA 485 Query 478 TVLKEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIG-AQPVPDAD-PIDDGDSLASVLS 535 +VLK IE YNHYDCRSTR LRDWL+ RA E GV P G +P PD D P + D++ L Sbjct 486 SVLKAIEDYNHYDCRSTRRLRDWLMNRAIECGVPPRGPVRPSPDTDRPRAEVDAVERTLL 545 Query 536 KFTGDAAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLAS 595 KF GD RTPEQ A A++AAA+G+H+REDKPFWW HFDR+N PV+EW+D +DVF+A Sbjct 546 KFAGDGIEA-RTPEQRAAAMMAAAKGFHKREDKPFWWGHFDRVNNPVEEWADDSDVFIAD 604 Query 596 EASVTVDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPA 655 + DWH PPRARKPQR VRL GE+A G L +++ALY+PP P G++D+PDRR Sbjct 605 RHEIVEDWHTPPRARKPQRHVRLFGEIANGGLATDMYALYDPPTPEGLSDDPDRRGFASV 664 Query 656 AVVETDDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGS 715 +V + D+P PTEVVIVER + G+ + Q+PFAL PG P+ T L+ ++ TAA +A+G Sbjct 665 SVADCDNPEAPTEVVIVERRPTGGDVYTQVPFALTPGAPISTALLQNAVADTAALIAAGL 724 Query 716 PQLPSTALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYT 775 P LP+ AL D+ LRRPPRTRSG LPR+ V D+ AA LDLDSSYLAVHGPPGTGKTYT Sbjct 725 PNLPADALTDIFLRRPPRTRSGNPLPRTGGTVADLTAALLDLDSSYLAVHGPPGTGKTYT 784 Query 776 AARVIAELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDG 835 + +VIA L+TEH W+IGVVAQSHA VENL ++ AG+D +V KK H + G W + Sbjct 785 SGKVIAALLTEHQWKIGVVAQSHAVVENLFGDIMRAGVDGARVGKKRHTVSTG-WTELGR 843 Query 836 SQYTEFIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLL 895 Y +F+ GCV+GGTAWDFAN + + LDLLVI+EAGQF LANT+AVA AA NL+ Sbjct 844 DDYVDFLC-QGGCVVGGTAWDFANATKFERECLDLLVIEEAGQFSLANTVAVARAARNLM 902 Query 896 LLGDPQQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSAL 955 LLGDPQQLPQVSQGTHPEPVD SAL WLVDG TLP ERGYFLD+S+RMHP VC AVS L Sbjct 903 LLGDPQQLPQVSQGTHPEPVDGSALGWLVDGHATLPPERGYFLDQSFRMHPDVCRAVSRL 962 Query 956 SYEGRLCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPW-- 1013 SY+GRL S+ TA RRLDG PGV T V H GN+ ESPEEA+AI+ E+R+LLG+ W Sbjct 963 SYDGRLLSYETVTAARRLDGVAPGVRTLPVSHLGNATESPEEADAIVTEIRRLLGAAWTD 1022 Query 1014 ---TDEHGTRPLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPV 1070 TD TRPL +DVL++ PYNAQV L+RRRL +AGL VR GTVDKFQG QAPV Sbjct 1023 AASTDTDATRPLDQTDVLIVTPYNAQVVLLRRRLDAAGL---TRVRAGTVDKFQGQQAPV 1079 Query 1071 VFISMTASSADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLG 1130 VF+SMTASS DDVPRGISFLLNRNRLNVAVSRA+Y AV+VRSE LT YLP TPD LV+LG Sbjct 1080 VFVSMTASSIDDVPRGISFLLNRNRLNVAVSRAKYLAVVVRSEHLTDYLPGTPDRLVELG 1139 Query 1131 AFLGLTS 1137 AFL LTS Sbjct 1140 AFLSLTS 1146 >gi|145222811|ref|YP_001133489.1| RecB family-like nuclease [Mycobacterium gilvum PYR-GCK] gi|145215297|gb|ABP44701.1| nuclease (RecB family)-like protein [Mycobacterium gilvum PYR-GCK] Length=1163 Score = 1409 bits (3646), Expect = 0.0, Method: Compositional matrix adjust. Identities = 721/1147 (63%), Positives = 860/1147 (75%), Gaps = 25/1147 (2%) Query 6 DSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRRLDQLR 65 D +++SASDLAAAARC+YALLR FD +LGRGPAV+ DDEL+AR A LG HE R LD+L Sbjct 10 DRVIFSASDLAAAARCEYALLRSFDDRLGRGPAVSGDDELLARTATLGDQHEKRHLDEL- 68 Query 66 HEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFLIR--- 122 V +IGRPAYT AGL AA T RA+ APV+YQAAMFDGRF GFADFL+ Sbjct 69 -ALASDVTVIGRPAYTVAGLTDAAGQTLRAVERRAPVIYQAAMFDGRFAGFADFLLLEEG 127 Query 123 -DGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGEL 181 DG RYR+ DTKLARS V ALLQ+AAY + L +GVPVA + +L LGDGT V Y V EL Sbjct 128 PDGQRYRLRDTKLARSVKVEALLQMAAYVETLTAAGVPVAPEIDLVLGDGTAVSYPVDEL 187 Query 182 IPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRVR 241 +PVYR +RA LQ+LL+ H G AV W+DE V+ACFRC +C ++RA DDLLLV GMRV Sbjct 188 LPVYRPRRAALQQLLEDHLAGGRAVEWEDEHVRACFRCAECDTQVRARDDLLLVAGMRVS 247 Query 242 QRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQR----DTGAPQFEIVD 297 R +LL+AGITT+ ELA H PV L++ + LTAQA+LQ+ +R T P +EIVD Sbjct 248 ARARLLDAGITTVHELAAHRGPVAELSSRTVTALTAQARLQVARRVVENGTEKPPYEIVD 307 Query 298 PRPLTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAE 357 P+PL +LP+ + GDLFFDFEGDPLWT DG+ WGLEYL+GVL G F+P WAH+RT E Sbjct 308 PQPLMVLPDADKGDLFFDFEGDPLWTTDGRDWGLEYLWGVLTPGDE--FQPFWAHNRTEE 365 Query 358 RQALTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDL 417 RQAL DFL V +RR R+P MHIYHYA YEK+ALLRL GRYG+GE +VD+LLR+GVLVDL Sbjct 366 RQALQDFLKFVRKRRNRYPGMHIYHYAAYEKSALLRLAGRYGVGEHEVDELLRDGVLVDL 425 Query 418 YPLVRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAA 477 YPLVRKSIRVGT+++S+K+LEPLY+G + R GDVTTA SI YA YCELR G +EAA Sbjct 426 YPLVRKSIRVGTENYSIKSLEPLYMGNELRDGDVTTATASITEYAHYCELRDDGNAEEAA 485 Query 478 TVLKEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIG-AQPVPDAD-PIDDGDSLASVLS 535 +VLK IE YNHYDCRSTR LRDWL+ RA E GV P G +P PD D P + D++ L Sbjct 486 SVLKAIEDYNHYDCRSTRRLRDWLMNRAIECGVPPRGPVRPSPDTDRPRAEVDAVERTLL 545 Query 536 KFTGDAAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLAS 595 KF GD RTPEQ A A++AAA+G+H+REDKPFWW HFDR+N PV+EW+D +DVF+A Sbjct 546 KFAGDGIEA-RTPEQRAAAMMAAAKGFHKREDKPFWWGHFDRVNNPVEEWADDSDVFIAD 604 Query 596 EASVTVDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPA 655 + DWH PPRARKPQR VRL GE+A G L +++ALY+PP P G++D+PDRR Sbjct 605 RHEIVEDWHTPPRARKPQRHVRLFGEIANGGLATDMYALYDPPTPEGLSDDPDRRGFASV 664 Query 656 AVVETDDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGS 715 +V + D+P PTEVVIVER + G+ + Q+PFAL PG P+ T L+ ++ TAA +A+G Sbjct 665 SVADCDNPEAPTEVVIVERRPTGGDVYTQVPFALTPGAPISTALLQNAVADTAALIAAGL 724 Query 716 PQLPSTALMDVLLRRPPRTRSGAALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYT 775 P LP+ AL D+ LRRPPRTRSG LPR+ V D+ AA LDLDSSYLAVHGPPGTGKTYT Sbjct 725 PNLPADALTDIFLRRPPRTRSGNPLPRTGGTVADLTAALLDLDSSYLAVHGPPGTGKTYT 784 Query 776 AARVIAELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDG 835 + +VIA L+TEH W+IGVVAQSHA VENL ++ AG+D +V KK H + G W + Sbjct 785 SGKVIAALLTEHQWKIGVVAQSHAVVENLFGDIMRAGVDGARVGKKRHTVSTG-WTELGR 843 Query 836 SQYTEFIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLL 895 Y +F+ GCV+GGTAWDFAN + + LDLLVI+EAGQF LANT+AVA AA NL+ Sbjct 844 DDYVDFLCQ-GGCVVGGTAWDFANATKFERECLDLLVIEEAGQFSLANTVAVARAARNLM 902 Query 896 LLGDPQQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSAL 955 LLGDPQQLPQVSQGTHPEPVD SAL WLVDG TLP ERGYFLD+S+RMHP VC AVS L Sbjct 903 LLGDPQQLPQVSQGTHPEPVDGSALGWLVDGHATLPPERGYFLDQSFRMHPDVCRAVSRL 962 Query 956 SYEGRLCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPW-- 1013 SY+GRL S+ TA RRLDG PGV T V H GN+ ESPEEA+AI+ E+R+LLG+ W Sbjct 963 SYDGRLLSYETVTAARRLDGVAPGVRTLPVSHLGNATESPEEADAIVTEIRRLLGAAWTD 1022 Query 1014 ---TDEHGTRPLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPV 1070 TD TRPL +DVL++ PYNAQV L+RRRL +AGL VR GTVDKFQG QAPV Sbjct 1023 AASTDTDATRPLDQTDVLIVTPYNAQVVLLRRRLDAAGL---TRVRAGTVDKFQGQQAPV 1079 Query 1071 VFISMTASSADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLG 1130 VF+SMTASS DDVPRGISFLLNRNRLNVAVSRA+Y AV+VRSE LT YLP TPD LV+LG Sbjct 1080 VFVSMTASSIDDVPRGISFLLNRNRLNVAVSRAKYLAVVVRSEHLTDYLPGTPDRLVELG 1139 Query 1131 AFLGLTS 1137 AFL LTS Sbjct 1140 AFLSLTS 1146 >gi|169628492|ref|YP_001702141.1| hypothetical protein MAB_1401c [Mycobacterium abscessus ATCC 19977] gi|169240459|emb|CAM61487.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=1143 Score = 1301 bits (3367), Expect = 0.0, Method: Compositional matrix adjust. Identities = 700/1147 (62%), Positives = 826/1147 (73%), Gaps = 21/1147 (1%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 +FV D +VYSASDLA+AARC+YALLR FDAKLG PA DDEL+AR A+LG AHE Sbjct 1 MFVLDDRVVYSASDLASAARCEYALLRVFDAKLGWAPAPPRDDELLARTAILGDAHEAHH 60 Query 61 LDQLRHEFGDAVA-IIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADF 119 L L+ FG VA I PA+T GL AAA ATRRA P VYQAAMFDGRF+GFADF Sbjct 61 LSALQARFGAGVAGIPFPPAFTLEGLQAAAAATRRAFEQGYPAVYQAAMFDGRFLGFADF 120 Query 120 LIRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVG 179 ++R+G Y V DTKLARS VTALLQLAAYAD+L +GVPVA L LGD + V Y Sbjct 121 VVREGEHYLVCDTKLARSAKVTALLQLAAYADSLAATGVPVAPSVRLILGDRSAVDYPAA 180 Query 180 ELIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMR 239 +L+ VYR +R LQ LLD H + G VRW D V+ACFRCP C + +DDLLLV GMR Sbjct 181 DLVGVYRQRRKQLQDLLDHHLSGGVPVRWSDHHVRACFRCPVCEPEVERTDDLLLVAGMR 240 Query 240 VRQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPR 299 V QR LL+AG+ T+A+LA T PV L+ +L +L AQA+LQIRQRD+G PQFE+ DP Sbjct 241 VSQRAALLQAGVGTVAQLATRTEPVADLSARSLRQLMAQAELQIRQRDSGTPQFEVADPI 300 Query 300 PLTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAG--VFRPLWAHDRTAE 357 PL LP PNPGD+FFDFEGDPLWT DG WGLEYLFGVLE R+G FRP+WAHDR E Sbjct 301 PLGTLPAPNPGDVFFDFEGDPLWTEDGVHWGLEYLFGVLEYDRSGNEKFRPIWAHDRRTE 360 Query 358 RQALTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDL 417 R+AL FL +VA+RRRR+P MH+YHYA YEK+ALLRL GRYGIGE +DDLLR+ +LVDL Sbjct 361 RKALLAFLELVAKRRRRYPGMHVYHYAAYEKSALLRLAGRYGIGEQQIDDLLRDNILVDL 420 Query 418 YPLVRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAA 477 YP+VRKSIR G++ + LKALEPL++ + RSG+VTTA DSIN YARYC LR G A Sbjct 421 YPVVRKSIRCGSNGYGLKALEPLFIESGKRSGEVTTAVDSINEYARYCALRDNGD-PGAQ 479 Query 478 TVLKEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDAD-PIDDGDSLASVLSK 536 VL I YN YDC STR LRDWLL+RA+E G+T + + + P + D + L+ Sbjct 480 EVLDSIAEYNRYDCASTRKLRDWLLVRAFEHGITHLSSSSSAAGEQPEQESDEVGRALAD 539 Query 537 FTGDAAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASE 596 F GD A +R P+QTA A++AAARGYH RE KPFWW+HFDRLN PVDEW+D+ VF+ Sbjct 540 FAGDGAPADRAPDQTAAAMIAAARGYHNRERKPFWWSHFDRLNNPVDEWADTAGVFIVES 599 Query 597 ASVTVDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTD-NPDRRAAGPA 655 A + DWH RK +R V++TG+LA G L +V+ALYEPPAPPG+ D +PDRRA+G A Sbjct 600 ARLVEDWHKSGSQRKLRRHVQVTGDLAGGVLEDSVYALYEPPAPPGLGDGDPDRRASGSA 659 Query 656 AVVE-TDDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASG 714 VVE T+ VP EV I E T +G F +P AL PGPPV T AL +IE A VA Sbjct 660 TVVEITESGGVPVEVTIRELTPKNGEVFSAMPMALTPGPPVMTKALEAAIEEVAMGVAHR 719 Query 715 SPQLPSTALMDVLLRRPPRTRSGAALP--RSSDPVTDIAAAALDLDSSYLAVHGPPGTGK 772 P++P TA +D+LLRR PR G LP + I +A LDSSYLAVHGPPGTGK Sbjct 720 LPEMPRTASLDILLRRNPR---GGPLPPVDAGGYAGAITSALRALDSSYLAVHGPPGTGK 776 Query 773 TYTAARVIAELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTA-GRWQ 831 T+TAARVIA+LVT+ W +GVVAQSHA VE+LL+ V++AG+ +VAKK ++ W Sbjct 777 TFTAARVIADLVTQDRWLVGVVAQSHAVVEHLLDQVVAAGVPADRVAKKASPYSGDAAWT 836 Query 832 SIDGSQYTEFIRDTA--GCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAP 889 I S Y FI D G VIGGTAWDFAN RV +L+LLVIDEAGQF LANT+AVA Sbjct 837 QIRDSDYARFIADHTGQGAVIGGTAWDFANATRVADDALELLVIDEAGQFSLANTLAVAR 896 Query 890 AATNLLLLGDPQQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVC 949 A NLLLLGDPQQLPQVSQG HPEPVDTSAL WLV+G LP RGYFL+RSYRMHPA+C Sbjct 897 GARNLLLLGDPQQLPQVSQGVHPEPVDTSALGWLVEGHGALPASRGYFLERSYRMHPALC 956 Query 950 AAVSALSYEGRLCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLL 1009 VS LSY+G L S R L G PPGV T V H+GN+ SP+EAEAI E+ +L+ Sbjct 957 QYVSRLSYDGELESAAPE---RSLAGQPPGVRTLLVDHEGNATSSPQEAEAIATEIARLI 1013 Query 1010 GSPWTDEHGTRPLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAP 1069 GS WTDE GTRPL SDVLV+APYNAQV +R LA+AGLG V VGTVDKFQG QAP Sbjct 1014 GSDWTDESGTRPLEQSDVLVVAPYNAQVLTLRATLAAAGLG---EVLVGTVDKFQGRQAP 1070 Query 1070 VVFISMTASSADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDL 1129 VVF+SMTAS+ DDVPRG+SFLLNRNRLNVA+SRA++ AVIVRS LT+YLP TPDGLV+L Sbjct 1071 VVFVSMTASAVDDVPRGMSFLLNRNRLNVAISRAKFQAVIVRSPALTEYLPTTPDGLVEL 1130 Query 1130 GAFLGLT 1136 GAFL L+ Sbjct 1131 GAFLALS 1137 >gi|226365500|ref|YP_002783283.1| hypothetical protein ROP_60910 [Rhodococcus opacus B4] gi|226243990|dbj|BAH54338.1| hypothetical protein [Rhodococcus opacus B4] Length=1155 Score = 1165 bits (3013), Expect = 0.0, Method: Compositional matrix adjust. Identities = 632/1157 (55%), Positives = 778/1157 (68%), Gaps = 28/1157 (2%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRG----PAVAVDDE-LMARAAVLGSA 55 +F+ D+IVYSASDL+AAA C++ALLR DA LG G A +VDD+ ++ R + LG A Sbjct 1 MFLLDDTIVYSASDLSAAATCEFALLRRLDATLGLGGAGTSAPSVDDDPMLRRTSSLGDA 60 Query 56 HEGRRLDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVG 115 HE RRL+Q R E+GD V + RP YT GL A AT AI+ A VVYQ FDGRF+G Sbjct 61 HEHRRLEQFRAEYGDGVVTMDRPEYTTVGLFDANLATVEAISGGADVVYQGTFFDGRFLG 120 Query 116 FADFLIRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVR 175 F DFL+RDG + V DTKL+R V ALLQLAAYA+AL +G+P + D L LGD + Sbjct 121 FCDFLVRDGDTFAVYDTKLSRHAKVPALLQLAAYAEALAGNGIPTSPDVHLLLGDDSDSA 180 Query 176 YRVGELIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLV 235 + +G+++PVY ++R+ L+R+LD H + W D R AC RC CT + DLLLV Sbjct 181 HPLGDIVPVYSARRSSLERILDEHRDEQSVAEWGDPRYTACGRCDTCTPEVEQHRDLLLV 240 Query 236 GGMRVRQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEI 295 GMR QR +L+ AGI T+ LA HT V GL L L AQA LQ+RQ +G P+F++ Sbjct 241 AGMRSTQRSRLIAAGIGTLDALAAHTGGVEGLPERTLESLRAQAALQLRQESSGTPEFQL 300 Query 296 VDPRPLTLLPEPNPGDLFFDFEGDPLWTADGK-QWGLEYLFGVLEA-GRAGVFRPLWAHD 353 P+ L LPEP+ GD+FFDFEGDPLW +G WGLEYLFGV+E A VFRP WAHD Sbjct 301 YAPQALGGLPEPDDGDIFFDFEGDPLWAENGSTDWGLEYLFGVVEGPAEAAVFRPFWAHD 360 Query 354 RTAERQALTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGV 413 R ERQAL DFL V RR+++PNMHIYHYA YEK+ALLRL GR+G+GE+ VD LLR+ V Sbjct 361 RAEERQALVDFLDYVTARRQQYPNMHIYHYAAYEKSALLRLAGRHGVGEETVDTLLRDNV 420 Query 414 LVDLYPLVRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRI 473 LVDLYP+VR +R+G S+S+K LEPLY+ QPR GDVT AA S+ +YA YC+ R GR Sbjct 421 LVDLYPVVRGCLRIGERSYSIKKLEPLYMPEQPRDGDVTNAAASVVAYADYCDHRDNGRD 480 Query 474 DEAATVLKEIEGYNHYDCRSTRALRDWLLMRAWEAGVT--PIGAQPVPDADPIDDGDSLA 531 +EA +L+ I YN YDC ST LRDWL+ +A GV P G P P + + Sbjct 481 EEARALLQGIADYNEYDCDSTLRLRDWLIGQAQSHGVALRPPGDGPTPVTEECTPAE--- 537 Query 532 SVLSKFTGDAAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDV 591 + L +F G + R +Q A AL+AAA GYHRRE KPFWWAHFDRL P DE SD DV Sbjct 538 AALREFAGHGPSEHRGHDQQAAALMAAAVGYHRRERKPFWWAHFDRLVVPHDELSDIRDV 597 Query 592 FLASEASVTVDWHMP-PRARKPQRRVRLTGELARGDLNG---NVFALYEPPAPPGMT-DN 646 + S A V +WH PR RK +RR+ LTG G G ++ALY+ PAP + DN Sbjct 598 LVVSSAVVEENWHKSTPRQRKLRRRLELTGRFGTGSTVGPKTTMYALYDTPAPEAVAGDN 657 Query 647 PDRRAAGPAAVVETDDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIES 706 +R V+E +VVIVE +G + QLP A+ PGPP+ T + +I Sbjct 658 AQQRGTCTVNVLEVGKDGRRRDVVIVEEL-LNGEEYGQLPTAITPGPPITTDRIESAIAV 716 Query 707 TAAAVASGSPQLPSTALMDVLLRRPPRTRSGAALP--RSSDPVTDIAAAALDLDSSYLAV 764 A + S P+LP A +D+L R PRTRSG LP +D I AA LDL+ SY+AV Sbjct 717 AADGMCSPLPELPLCASVDILRRSDPRTRSGNPLPPVDGTDYAGAITAALLDLEDSYVAV 776 Query 765 HGPPGTGKTYTAARVIAELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHD 824 GPPGTGKTYT ARVI LV +H WRIGVVAQSH+ +EN+L GV+ AGL VAKK Sbjct 777 QGPPGTGKTYTGARVIKALVEQHHWRIGVVAQSHSVIENMLGGVVKAGLPAELVAKKDGR 836 Query 825 HTAGRWQSIDGSQYTEFIR--DTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLA 882 H A W I + Y FI + GCVIGGTAWDFAN +RVP SLDLLVIDEAGQF LA Sbjct 837 HRAATWTDISSNDYPGFIDQAEGTGCVIGGTAWDFANTDRVPPGSLDLLVIDEAGQFALA 896 Query 883 NTIAVAPAATNLLLLGDPQQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSY 942 NTIAV AA NLLLLGDPQQLPQVSQGTHPEPVD SAL WL +G LP RGYFL+R++ Sbjct 897 NTIAVGGAARNLLLLGDPQQLPQVSQGTHPEPVDASALGWLAEGHGALPASRGYFLERTW 956 Query 943 RMHPAVCAAVSALSYEGRLCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAIL 1002 RMHP +CA VS LSY+G+L S +A RRLDG GVHT V H+GN+ +SPEE+ ++ Sbjct 957 RMHPDLCAPVSTLSYDGKLRSQESASAARRLDGIDAGVHTVVVDHQGNATQSPEESREVV 1016 Query 1003 AELRQLLGSPWTDE---HGTRPLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGT 1059 + +LLGS WTD GTRPL SD+LV+APYNAQV L+ R LA+ GL D V VGT Sbjct 1017 NRITKLLGSGWTDPSEFEGTRPLDESDILVVAPYNAQVGLIERDLAAVGL---DKVEVGT 1073 Query 1060 VDKFQGGQAPVVFISMTASSADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYL 1119 VDKFQG +A V +SMTAS+ +DVPRG+SFLL+RNR+NVAVSR ++AA+IVRSE LTQY+ Sbjct 1074 VDKFQGREAAVAIVSMTASAIEDVPRGMSFLLSRNRMNVAVSRGKWAAIIVRSESLTQYM 1133 Query 1120 PATPDGLVDLGAFLGLT 1136 P+TP+GL++LGAF+ LT Sbjct 1134 PSTPEGLIELGAFMRLT 1150 >gi|111022995|ref|YP_705967.1| hypothetical protein RHA1_ro06032 [Rhodococcus jostii RHA1] gi|110822525|gb|ABG97809.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=1155 Score = 1153 bits (2982), Expect = 0.0, Method: Compositional matrix adjust. Identities = 633/1157 (55%), Positives = 775/1157 (67%), Gaps = 28/1157 (2%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAV-----DDELMARAAVLGSA 55 +F+ D+IVYSASDL+AAA C++ALLR DA LG A + DD ++ R + LG A Sbjct 1 MFLLDDTIVYSASDLSAAATCEFALLRRLDATLGLAGAGSAAPSVDDDPMLRRTSSLGDA 60 Query 56 HEGRRLDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVG 115 HE RRL+Q R E+GD V + RP YT GL A AT AI A VVYQ FDGRF+G Sbjct 61 HEHRRLEQFRAEYGDGVVTMDRPEYTAVGLFDANLATVEAIRGGADVVYQGTFFDGRFLG 120 Query 116 FADFLIRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVR 175 F DFL+RDG Y V DTKL+R V+ALLQLAAYA+AL +G+P + D L LGD + Sbjct 121 FCDFLVRDGDTYAVYDTKLSRHAKVSALLQLAAYAEALADNGIPTSPDVHLLLGDDSDSA 180 Query 176 YRVGELIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLV 235 + +G+++PVY ++R+ L+R+LD H + W D R AC RC CT + DLLLV Sbjct 181 HSLGDIVPVYSARRSSLERILDEHRDEQSLAEWGDPRYTACGRCDTCTPEVEQHRDLLLV 240 Query 236 GGMRVRQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEI 295 GMR QR +L+ AGI T+ LA H V GL L L AQA LQ+RQ +G P+F++ Sbjct 241 AGMRTTQRSRLIAAGIGTLDALAAHAGSVEGLPERTLESLRAQAALQLRQESSGTPEFQV 300 Query 296 VDPRPLTLLPEPNPGDLFFDFEGDPLWTADGK-QWGLEYLFGVLEA-GRAGVFRPLWAHD 353 P+ L LPEP+ GD+FFDFEGDPLW +G WGLEYLFGV+E A VFRP WAHD Sbjct 301 YAPQALGGLPEPDDGDIFFDFEGDPLWAENGSTDWGLEYLFGVVEGPADAAVFRPFWAHD 360 Query 354 RTAERQALTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGV 413 R ERQAL DFL V RR+++PNMHIYHYA YEK+ALLRL GR+G+GE+ VD LLR+ V Sbjct 361 RAEERQALVDFLDYVTARRQQYPNMHIYHYAAYEKSALLRLAGRHGVGEETVDTLLRDNV 420 Query 414 LVDLYPLVRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRI 473 LVDLYP+VR +R+G S+S+K LEPLY+ QPR GDVT AA S+ +YA YC+ R GR Sbjct 421 LVDLYPVVRGCLRIGERSYSIKKLEPLYMPEQPRDGDVTNAAASVVAYADYCDHRDNGRE 480 Query 474 DEAATVLKEIEGYNHYDCRSTRALRDWLLMRAWEAGVT--PIGAQPVPDADPIDDGDSLA 531 DEA +L+ I YN YDC ST LRDWL+ +A GV P G P P +D Sbjct 481 DEARALLQGIADYNEYDCDSTLRLRDWLIGQAETHGVALRPPGDGPTP---VTEDCTPAE 537 Query 532 SVLSKFTGDAAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDV 591 + L +F G + R +Q A AL+AAA GYHRRE KPFWWAHFDRL P DE SD DV Sbjct 538 AALREFAGHGPSEHRGHDQQAAALMAAAVGYHRRERKPFWWAHFDRLVVPHDELSDIRDV 597 Query 592 FLASEASVTVDWHM-PPRARKPQRRVRLTGELARGDLNG---NVFALYEPPAPPGMT-DN 646 + S A V +WH PR RK +RR++LTG G G ++ALY+ PAP + DN Sbjct 598 LVVSSAVVEENWHKSSPRQRKLRRRLQLTGRFGTGSTVGPKTTMYALYDTPAPEAVAGDN 657 Query 647 PDRRAAGPAAVVETDDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIES 706 P +R V++ +VVIVE +G + QLP A+ PGPP+ T + SI Sbjct 658 PQQRGTCTVNVLDVGKDGRRRDVVIVEEL-LNGEEYGQLPTAITPGPPITTDRIESSIAV 716 Query 707 TAAAVASGSPQLPSTALMDVLLRRPPRTRSGAALP--RSSDPVTDIAAAALDLDSSYLAV 764 A V + P+LP A +D+L R PRTRSG LP +D I AA LDL+ SY+AV Sbjct 717 AADDVCAPLPELPLCASVDILRRSDPRTRSGNPLPPVDGTDYAGAITAALLDLEDSYVAV 776 Query 765 HGPPGTGKTYTAARVIAELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHD 824 GPPGTGKTYT ARVI LV +H WRIGVVAQSH+ +EN+L GV+ AGL VAKK Sbjct 777 QGPPGTGKTYTGARVIKALVEQHHWRIGVVAQSHSVIENMLGGVVKAGLPAELVAKKDGR 836 Query 825 HTAGRWQSIDGSQYTEFIR--DTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLA 882 H A W I + Y FI + GCVIGGTAWDFAN +RVP SLDLLVIDEAGQF LA Sbjct 837 HRAATWTDISSNDYPGFIDQAEETGCVIGGTAWDFANTDRVPPGSLDLLVIDEAGQFALA 896 Query 883 NTIAVAPAATNLLLLGDPQQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSY 942 NTIAV AA NLLLLGDPQQLPQVSQGTHPEPVD SAL WL +G LP RGYFL+R++ Sbjct 897 NTIAVGGAARNLLLLGDPQQLPQVSQGTHPEPVDASALGWLAEGHGALPASRGYFLERTW 956 Query 943 RMHPAVCAAVSALSYEGRLCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAIL 1002 RMHP +CA VS LSY+G+L S +A RRLDG GVHT V H+GN+ +SPEE+ ++ Sbjct 957 RMHPELCAPVSTLSYDGKLRSQESASAARRLDGMGAGVHTVFVDHQGNATQSPEESREVV 1016 Query 1003 AELRQLLGSPWTDE---HGTRPLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGT 1059 + +LLGS WTD GTRPL SD+LV+APYNAQV L+ R LA+ GL D V VGT Sbjct 1017 NRITKLLGSGWTDPSEFEGTRPLDESDILVVAPYNAQVGLIERSLAAVGL---DKVEVGT 1073 Query 1060 VDKFQGGQAPVVFISMTASSADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYL 1119 VDKFQG +A V +SMTAS+ +DVPRG+SFLL+RNR+NVAVSR ++AA+IVRSE LTQY+ Sbjct 1074 VDKFQGREAAVAIVSMTASAIEDVPRGMSFLLSRNRMNVAVSRGKWAAIIVRSESLTQYM 1133 Query 1120 PATPDGLVDLGAFLGLT 1136 P+TP+GL +LGAF+ LT Sbjct 1134 PSTPEGLTELGAFMRLT 1150 >gi|312138925|ref|YP_004006261.1| hypothetical protein REQ_14980 [Rhodococcus equi 103S] gi|311888264|emb|CBH47576.1| conserved hypothetical protein [Rhodococcus equi 103S] Length=1176 Score = 1110 bits (2870), Expect = 0.0, Method: Compositional matrix adjust. Identities = 636/1157 (55%), Positives = 768/1157 (67%), Gaps = 26/1157 (2%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAK--LGRGPAVAVDDELMARAAVLGSAHEG 58 +F+ GD+IVYS DL AAA C++ALLR D G V D ++ RA+ LG+AHE Sbjct 1 MFLQGDAIVYSTGDLTAAAACEFALLRRLDGLLGFATGSPGPVADPVLERASRLGAAHER 60 Query 59 RRLDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFAD 118 R D+ G + I RP +T AGL A T A APV++Q A FDGRF+GF D Sbjct 61 RVFDEFAARHG-RIETIARPEFTAAGLYDAHRDTIAAAVAGAPVIHQGAFFDGRFLGFCD 119 Query 119 FLIR-----DGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTI 173 FL+R D Y V D KL+R V+ALLQLAAYADAL +GV A + L LGDG+ Sbjct 120 FLVREDEHGDDGTYTVYDAKLSRRVEVSALLQLAAYADALDAAGVRPAREVHLLLGDGSD 179 Query 174 VRYRVGELIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLL 233 + + +L+PVYR++RA LQR+LD H W D+R AC RC C + + D L Sbjct 180 SVHALADLVPVYRARRAALQRVLDEHRADDAPAAWGDDRYSACGRCETCAREIESRRDPL 239 Query 234 LVGGMRVRQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQF 293 LV GMRV RDKL+ A +TTI LA APVPGL+ L L +QA LQ+RQ +G ++ Sbjct 240 LVAGMRVATRDKLVSADVTTIDVLATRNAPVPGLSAATLDTLRSQAALQLRQETSGIAEY 299 Query 294 EIVDPRPLTLLPEPNPGDLFFDFEGDPLWTADGK-QWGLEYLFGVLE---AGRAGVFRPL 349 EI D L LP P+PGD++FDFEGDPLW G+ +WGLEYLFGVLE AG A +FRP Sbjct 300 EIFDAAALAALPPPDPGDIYFDFEGDPLWAEPGEAEWGLEYLFGVLEEPTAGGAPLFRPF 359 Query 350 WAHDRTAERQALTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLL 409 WAHDR ER AL+ FL + RR HP MH+YHYA YEK+ALLRL GR+G+GE++VD+LL Sbjct 360 WAHDRAEERNALSAFLDYLRARRIAHPGMHVYHYAAYEKSALLRLAGRHGVGEEEVDELL 419 Query 410 RNGVLVDLYPLVRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRA 469 R G+LVDLYP+VR S+R+G S+S+K LEPLYLG R DVTTAADS+ +YARYC+LR Sbjct 420 RAGILVDLYPIVRASLRIGERSYSIKKLEPLYLGEDLRDNDVTTAADSVVAYARYCDLRD 479 Query 470 AGRIDEAATVLKEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDS 529 GR D+AA VL+EI YN DC STR LR+WLL RA + G++P + P A ++ + Sbjct 480 LGRPDDAADVLREIRDYNEDDCVSTRELRNWLLARAADHGISPHSREITPPASEPEEDSA 539 Query 530 LASVLSKFTGDAAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDST 589 VL +F G+ A RT EQ A AL AAA GYHRRE KPFWWAHF RL PVD+W D+ Sbjct 540 AERVLRRFAGEGPASARTGEQQAAALAAAAVGYHRRERKPFWWAHFARLTEPVDDWPDTR 599 Query 590 DVFLASEASVTVDWHMP-PRARKPQRRVRLTGELARGDL---NGNVFALYEPPAPPGMT- 644 DV + A V WH R RK +R VRLTG G +F LYE P P T Sbjct 600 DVLVVDHAEVVQGWHKSTSRQRKLRRHVRLTGTFGTGSTIRPGAEMFPLYERPVPGAKTS 659 Query 645 DNPDRRAAGPAAVVETDDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESI 704 ++P RA A V D +VV+VE T + + P ALAPG PV T + ++ Sbjct 660 EHPGGRAWSTAVVSSVDTNADFDDVVVVEETLTGDVEYDATPMALAPGHPVATARIDRAV 719 Query 705 ESTAAAVASGSPQLPSTALMDVLLRRPPRTRSGAALP--RSSDPVTDIAAAALDLDSSYL 762 E A A+AS P P+ A DVL R PPR RSG+ LP DP T IA A +DLD SYL Sbjct 720 EEFAGAMASALPVSPANAATDVLRRVPPRLRSGSGLPAIAGCDPATAIATALVDLDDSYL 779 Query 763 AVHGPPGTGKTYTAARVIAELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKP 822 AV GPPGTGKTYT RV+A LV EH WRIGVVAQSH+ VEN+L+ V+ AGLD VAKK Sbjct 780 AVQGPPGTGKTYTGGRVVASLVAEHGWRIGVVAQSHSVVENMLDAVVDAGLDGSMVAKKA 839 Query 823 HDHTAGRWQSIDGSQYTEFIRD-TAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCL 881 RW ++ ++Y F+ D TAGCVIGGTAWDFA+ RVP SLDLLVIDEAGQF L Sbjct 840 DAAPGRRWTALPTTEYPRFLADATAGCVIGGTAWDFAHSGRVPVGSLDLLVIDEAGQFSL 899 Query 882 ANTIAVAPAATNLLLLGDPQQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRS 941 ANTIAV+ AA NLLLLGDPQQLPQVSQGTHPEPVD SAL WL G+ +LP +RGYFL+R+ Sbjct 900 ANTIAVSAAARNLLLLGDPQQLPQVSQGTHPEPVDESALGWLAAGRDSLPRDRGYFLERT 959 Query 942 YRMHPAVCAAVSALSYEGRLCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAI 1001 +RMHPA+C VS LSYEGRL S T RRL G PGVH V H G S +SPEE+ AI Sbjct 960 WRMHPALCERVSQLSYEGRLHSEETVTTARRLAGLGPGVHVEIVEHDGRSTDSPEESAAI 1019 Query 1002 LAELRQLLGSPWTDEH---GTRPLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVG 1058 +A +R+LLG WTD GTRPL +DVLV+AP+NAQVA +R+ LA+AGL V VG Sbjct 1020 VARIRELLGRAWTDPSDFAGTRPLGQADVLVVAPFNAQVARLRQDLAAAGL---PDVLVG 1076 Query 1059 TVDKFQGGQAPVVFISMTASSADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQY 1118 TVDKFQG QA VV +SMTAS+A D PRG+SFLL+RNRLNVAVSRA++ A++VRS T Y Sbjct 1077 TVDKFQGRQAAVVLVSMTASTATDAPRGMSFLLSRNRLNVAVSRAKWCAIVVRSRTFTHY 1136 Query 1119 LPATPDGLVDLGAFLGL 1135 LP TP L +LGAFL L Sbjct 1137 LPPTPTALAELGAFLRL 1153 >gi|226307591|ref|YP_002767551.1| hypothetical protein RER_41040 [Rhodococcus erythropolis PR4] gi|226186708|dbj|BAH34812.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=1147 Score = 1109 bits (2869), Expect = 0.0, Method: Compositional matrix adjust. Identities = 604/1156 (53%), Positives = 767/1156 (67%), Gaps = 28/1156 (2%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVD-DELMARAAVLGSAHEGR 59 +F+ D IVYSASDL+AAA C++ALLR+ DA+ G A AV+ D ++ R + LG +HE Sbjct 1 MFLLDDQIVYSASDLSAAASCEFALLRQLDARTGLISAEAVEADPMLERTSSLGDSHERE 60 Query 60 RLDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADF 119 +L + + GD V ++ RP ++ AGL +A AT A + APV+YQ FDGRF+GF DF Sbjct 61 QLQKFIDQHGDGVVVMPRPEHSRAGLTSATLATVEAARSGAPVIYQGTFFDGRFLGFCDF 120 Query 120 LIRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVG 179 L+R+G Y V D+KL+R V+ALLQLAAYADAL + + + L LGDG+ + +G Sbjct 121 LVREGDTYAVYDSKLSRHAKVSALLQLAAYADALERNAIAASDQVHLLLGDGSTSSHDIG 180 Query 180 ELIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMR 239 ++ PV+ ++RA L+R+LD H G +W D+R C RC C+ + + DLLLV G+R Sbjct 181 DIAPVFAARRAELERVLDEHRAEGKPTQWLDDRYLRCGRCDTCSVEVESHRDLLLVAGVR 240 Query 240 VRQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPR 299 QR++L+ +GITTI ELA T PV G+ L KL AQA +Q+RQ +G +FE+ +P Sbjct 241 GNQREQLIVSGITTIDELAASTGPVEGIRRETLDKLRAQAAVQLRQEQSGDAEFEVYEPS 300 Query 300 PLTLLPEPNPGDLFFDFEGDPLWTADGK-QWGLEYLFGVLEA-GRAGVFRPLWAHDRTAE 357 L LP P+ GD+FFDFEGDPLW DG WGLEYLFGV+E VF+P WAHDR E Sbjct 301 ALGGLPVPDDGDIFFDFEGDPLWAEDGSTDWGLEYLFGVVEGPADDYVFKPFWAHDRDGE 360 Query 358 RQALTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDL 417 RQAL DFL V RR HP MHIYHYA YEK+ALLRL R+G+GE VD LL VLVDL Sbjct 361 RQALLDFLDYVTARREAHPGMHIYHYAAYEKSALLRLAARHGVGEQTVDTLLSENVLVDL 420 Query 418 YPLVRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAA 477 YP+VR +R+G S+S+K LEPLY+G R GDVT AA S+ +YA YC+LR G+ D+A Sbjct 421 YPIVRACLRIGQRSYSIKKLEPLYMGEHGRDGDVTNAAASVVAYADYCQLRDGGQADQAR 480 Query 478 TVLKEIEGYNHYDCRSTRALRDWLLMRAWEAGV---TPIGAQPVPDADPIDDGDSLASVL 534 +L+ I YN YDC ST LRDWL RA E GV P G + P+++ L Sbjct 481 ELLQGISDYNEYDCESTLRLRDWLAERAAEHGVELREPTGQIKI----PLEELTESEIAL 536 Query 535 SKFTGDAAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLA 594 +F G A RTP+Q AVALLAAA GYH RE KP+WWAHFDRL P+++ D DV + Sbjct 537 REFAGHKAGSARTPDQQAVALLAAAVGYHNRERKPYWWAHFDRLVTPIEDLVDIRDVMVV 596 Query 595 SEASVTVDWHMP-PRARKPQRRVRLTGELARGDL---NGNVFALYEPPAPPGM-TDNPDR 649 ++ + DWH PR +K +R ++LTG G ++FALY P+P + ++NP + Sbjct 597 EQSEIEADWHKSTPRQKKFRRHIQLTGSFGTGTSLSPGSDLFALYATPSPDAVASENPTQ 656 Query 650 RAAGPAAVVETDDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAA 709 R V V + E G G+ + P ALAPG P+PT + +SI + A+ Sbjct 657 RGTSSVKVTAVVKSEGLDVVTVEELLG--GDEYLDAPVALAPGRPIPTGRMEKSIAAAAS 714 Query 710 AVASGSPQLPSTALMDVLLRRPPRTRSGAALP---RSSDPVTDIAAAALDLDSSYLAVHG 766 + P+LP A +D+L R PRTRSG+ LP ++ I AA LDLD SY+AV G Sbjct 715 GASEILPELPPVAAVDILRRSTPRTRSGSPLPPVGGDNNYADAITAALLDLDDSYVAVQG 774 Query 767 PPGTGKTYTAARVIAELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHT 826 PPGTGKTYT ARV+ L+ +H WRIGVVAQSH+ VEN+L G++ AG+DP VAKK Sbjct 775 PPGTGKTYTGARVVKTLIEQHQWRIGVVAQSHSVVENMLGGILKAGVDPALVAKKGSRSK 834 Query 827 AGRWQSIDGSQYTEFIRDT--AGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANT 884 WQ I +Y FI + GCVIGGTAWDFAN +RVP SLDLLV+DEAGQF LANT Sbjct 835 TAEWQDIASEEYAGFIAEAEGVGCVIGGTAWDFANTDRVPAGSLDLLVVDEAGQFALANT 894 Query 885 IAVAPAATNLLLLGDPQQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRM 944 IAVA +A NLLLLGDPQQLPQVSQGTHPEPVD SAL WL +G LP E GYFL++++RM Sbjct 895 IAVAISARNLLLLGDPQQLPQVSQGTHPEPVDESALGWLAEGHGALPPELGYFLEKTWRM 954 Query 945 HPAVCAAVSALSYEGRLCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAE 1004 HP +CA VSALSYEG+L S +A R+LDG GVHT V H+GNS SPEE+ I+ + Sbjct 955 HPDLCAPVSALSYEGKLHSQETVSAARKLDGLAAGVHTVFVDHRGNSTYSPEESHEIVRQ 1014 Query 1005 LRQLLGSPWTDE---HGTRPLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVD 1061 ++ LLG+PWTD GTRPL SD+LV+A YNAQV V R L AGL V VGTVD Sbjct 1015 IQGLLGTPWTDPSEFEGTRPLEQSDILVVAAYNAQVGTVERDLTEAGL---TEVEVGTVD 1071 Query 1062 KFQGGQAPVVFISMTASSADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPA 1121 KFQG +A V +SM AS+ +DVPRG+SFLL+RNRLNVAVSR ++ A+IVRS LTQY+P+ Sbjct 1072 KFQGREAAVAIVSMAASAVEDVPRGMSFLLSRNRLNVAVSRGKWCAIIVRSHALTQYMPS 1131 Query 1122 TPDGLVDLGAFLGLTS 1137 TP GLV+LGAF+ LTS Sbjct 1132 TPAGLVELGAFMRLTS 1147 >gi|325676652|ref|ZP_08156328.1| ATPase [Rhodococcus equi ATCC 33707] gi|325552542|gb|EGD22228.1| ATPase [Rhodococcus equi ATCC 33707] Length=1176 Score = 1109 bits (2868), Expect = 0.0, Method: Compositional matrix adjust. Identities = 633/1157 (55%), Positives = 766/1157 (67%), Gaps = 26/1157 (2%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAK--LGRGPAVAVDDELMARAAVLGSAHEG 58 +F+ GD+IVYS DL AAA C++ALLR D G V D ++ RA+ LG+AHE Sbjct 1 MFLQGDAIVYSTGDLTAAAACEFALLRRLDGLLGFATGSPGPVADPVLERASRLGAAHER 60 Query 59 RRLDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFAD 118 R D+ G + I RP +T AGL A T A APV++Q FDGRF+GF D Sbjct 61 RVFDEFAARHG-RIETIARPEFTAAGLYDAHRDTIAAAVAGAPVIHQGTFFDGRFLGFCD 119 Query 119 FLIR-----DGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTI 173 FL+R D Y V D KL+R V+ALLQLAAYADAL +GV A + L LGDG+ Sbjct 120 FLVREDEHGDDGTYTVYDAKLSRRVEVSALLQLAAYADALDAAGVRPAREVHLLLGDGSD 179 Query 174 VRYRVGELIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLL 233 + + +L+PVYR++RA LQR+LD H W D+R AC RC C + + D L Sbjct 180 SVHALADLVPVYRARRAALQRVLDEHRADDAPAAWGDDRYSACGRCETCAREIESRRDPL 239 Query 234 LVGGMRVRQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQF 293 LV GMRV RDKL+ G+TTI L APVPGL+ L L +QA LQ+RQ +G ++ Sbjct 240 LVAGMRVATRDKLVSGGVTTIDALPTRNAPVPGLSAATLDTLRSQAALQLRQETSGTAEY 299 Query 294 EIVDPRPLTLLPEPNPGDLFFDFEGDPLWTADGK-QWGLEYLFGVLE---AGRAGVFRPL 349 EI D L LP P+PGD++FDFEGDPLW G+ +WGLEYLFGVLE AG A +FRP Sbjct 300 EIFDAAALAALPPPDPGDIYFDFEGDPLWAEPGEAEWGLEYLFGVLEEPTAGGAPLFRPF 359 Query 350 WAHDRTAERQALTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLL 409 WAHDR ER AL+ FL + RR HP MH+YHYA YEK+ALLRL GR+G+GE++VD+LL Sbjct 360 WAHDRAEERNALSAFLEYIRARRIAHPGMHVYHYAAYEKSALLRLAGRHGVGEEEVDELL 419 Query 410 RNGVLVDLYPLVRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRA 469 R G+LVDLYP+VR S+R+G S+S+K LEPLYLG R DVTTAADS+ +YARYC+LR Sbjct 420 RAGILVDLYPIVRASLRIGERSYSIKKLEPLYLGEDLRDNDVTTAADSVVAYARYCDLRD 479 Query 470 AGRIDEAATVLKEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDS 529 GR D+AA +L+EI YN DC STR LR+WLL RA + G++P + P A ++ + Sbjct 480 LGRPDDAADLLREIRDYNEDDCVSTRELRNWLLARAADHGISPHSREITPPASEPEEDSA 539 Query 530 LASVLSKFTGDAAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDST 589 VL +F G+ A RT EQ A AL AAA GYHRRE KPFWWAHF RL PVD+W D+ Sbjct 540 AERVLRRFAGEGPASARTGEQQAAALAAAAVGYHRRERKPFWWAHFARLTEPVDDWPDTR 599 Query 590 DVFLASEASVTVDWHMP-PRARKPQRRVRLTGELARGDL---NGNVFALYEPPAPPGMT- 644 DV + A V WH PR RK +R VRLTG G +F LYE P P T Sbjct 600 DVLVVDHAEVVQGWHKSTPRQRKLRRHVRLTGTFGTGSTIRPGAEMFPLYERPVPGAKTS 659 Query 645 DNPDRRAAGPAAVVETDDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESI 704 ++P RA A V D +VV+VE T + + P ALAPG PV T + ++ Sbjct 660 EHPGGRAWSTAVVSSVDTNADFDDVVVVEETLTGDVEYDATPMALAPGHPVATARIDRAV 719 Query 705 ESTAAAVASGSPQLPSTALMDVLLRRPPRTRSGAALP--RSSDPVTDIAAAALDLDSSYL 762 E A A+AS P P+ A DVL R PPR RSG+ LP DP T IA A +DLD SYL Sbjct 720 EEFAGAMASALPVSPANAATDVLRRVPPRLRSGSGLPAIAGCDPATAIATALVDLDDSYL 779 Query 763 AVHGPPGTGKTYTAARVIAELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKP 822 AV GPPGTGKTYT RV+A LV EH WRIGVVAQSH+ VEN+L+ V+ AGLD VAKK Sbjct 780 AVQGPPGTGKTYTGGRVVASLVAEHGWRIGVVAQSHSVVENMLDAVVDAGLDGSMVAKKA 839 Query 823 HDHTAGRWQSIDGSQYTEFIRD-TAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCL 881 RW ++ ++Y F+ D TAGCVIGGTAWDFA+ RVP SLDLLVIDEAGQF L Sbjct 840 DAAPGRRWTALPTTEYPRFLEDATAGCVIGGTAWDFAHSGRVPVDSLDLLVIDEAGQFSL 899 Query 882 ANTIAVAPAATNLLLLGDPQQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRS 941 ANTIAV+ AA +LLLLGDPQQLPQVSQGTHPEPVD SAL WL G+ +LP +RGYFL+R+ Sbjct 900 ANTIAVSAAARDLLLLGDPQQLPQVSQGTHPEPVDESALGWLAAGRDSLPRDRGYFLERT 959 Query 942 YRMHPAVCAAVSALSYEGRLCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAI 1001 +RMHPA+C VS LSYEGRL S T RRL G PGVH V H G S +SPEE+ AI Sbjct 960 WRMHPALCERVSQLSYEGRLHSEETVTTARRLAGLDPGVHVEIVEHDGRSTDSPEESAAI 1019 Query 1002 LAELRQLLGSPWTDEH---GTRPLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVG 1058 +A +R+LLG WTD GTRPL +DVLV+AP+NAQVA +R+ LA+AGL V VG Sbjct 1020 VARIRELLGRAWTDASDFAGTRPLGQADVLVVAPFNAQVARLRQDLAAAGL---TDVLVG 1076 Query 1059 TVDKFQGGQAPVVFISMTASSADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQY 1118 TVDKFQG QA VV SMTAS+A D PRG+SFLL+RNRLNVAVSRA++ A++VRS T Y Sbjct 1077 TVDKFQGRQAAVVLASMTASTATDAPRGMSFLLSRNRLNVAVSRAKWCAIVVRSRTFTHY 1136 Query 1119 LPATPDGLVDLGAFLGL 1135 LP TP L +LGAFL L Sbjct 1137 LPPTPTALAELGAFLRL 1153 >gi|229493797|ref|ZP_04387575.1| RecB family nuclease, family protein [Rhodococcus erythropolis SK121] gi|229319296|gb|EEN85139.1| RecB family nuclease, family protein [Rhodococcus erythropolis SK121] Length=1147 Score = 1108 bits (2866), Expect = 0.0, Method: Compositional matrix adjust. Identities = 601/1156 (52%), Positives = 765/1156 (67%), Gaps = 28/1156 (2%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVD-DELMARAAVLGSAHEGR 59 +F+ D IVYSASDL+AAA C++ALLR+ DA+ G A A + D ++ R + LG +HE Sbjct 1 MFLLDDQIVYSASDLSAAASCEFALLRQLDARTGLIAAQAAEADPMLERTSSLGDSHERE 60 Query 60 RLDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADF 119 +L + + GD V ++ RP ++ AGL AA AT A + APV+YQ FDGRF+GF DF Sbjct 61 QLQKFIDQHGDGVVVMPRPEHSRAGLTAATLATVEAARSGAPVIYQGTFFDGRFLGFCDF 120 Query 120 LIRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVG 179 L+R+G Y V D+KL+R V+ALLQLAAYADAL + + + L LGDG+ + +G Sbjct 121 LVREGDTYAVYDSKLSRHAKVSALLQLAAYADALERNAIAASDQVHLLLGDGSTSSHDIG 180 Query 180 ELIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMR 239 ++ PV+ ++RA L+R+LD H G +W D+R C RC C+ + + DLLLV G+R Sbjct 181 DIAPVFAARRAELERVLDEHRAEGKPTQWLDDRYLRCGRCDTCSVEVESHRDLLLVAGVR 240 Query 240 VRQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPR 299 QR++L+ +GITTI ELA T PV G+ L K+ AQA +Q+RQ +G +FE+ +P Sbjct 241 GNQREQLIVSGITTIDELAASTGPVEGIRRETLDKIRAQAAVQLRQELSGDAEFEVYEPS 300 Query 300 PLTLLPEPNPGDLFFDFEGDPLWTADGK-QWGLEYLFGVLEA-GRAGVFRPLWAHDRTAE 357 L LP P+ GD+FFDFEGDPLW DG WGLEYLFGV+E VF+P WAHDR E Sbjct 301 ALGGLPIPDDGDIFFDFEGDPLWAEDGSTDWGLEYLFGVVEGPADDYVFKPFWAHDREGE 360 Query 358 RQALTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDL 417 RQAL DFL V RR HP MHIYHYA YEK+ALLRL R+G+GE VD LL VLVDL Sbjct 361 RQALLDFLDYVTARREAHPGMHIYHYAAYEKSALLRLAARHGVGEQTVDTLLSENVLVDL 420 Query 418 YPLVRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAA 477 YP+VR +R+G S+S+K LEPLY+G R GDVT AA S+ +YA YCELR G+ D+A Sbjct 421 YPIVRACLRIGQRSYSIKKLEPLYMGEHGRDGDVTNAAASVVAYADYCELRDGGQADQAR 480 Query 478 TVLKEIEGYNHYDCRSTRALRDWLLMRAWEAGV---TPIGAQPVPDADPIDDGDSLASVL 534 +L+ I YN YDC ST LRDWL RA E GV P G + P+++ L Sbjct 481 ELLQGISDYNEYDCESTLRLRDWLAERAAEHGVELREPTGQIKI----PLEELTESEIAL 536 Query 535 SKFTGDAAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLA 594 +F G A RTP+Q A ALLAAA GYH RE KP+WWAHFDRL P+++ D DV + Sbjct 537 REFAGHKAGSTRTPDQQAAALLAAAVGYHNRERKPYWWAHFDRLVTPIEDLVDIRDVMVV 596 Query 595 SEASVTVDWHMP-PRARKPQRRVRLTGELARGDL---NGNVFALYEPPAPPGM-TDNPDR 649 ++ + DWH PR +K +R ++LTG G ++FALY P+P + ++NP + Sbjct 597 EQSEIEADWHKSTPRQKKFRRHIQLTGSFGTGTSLSPGSDLFALYATPSPDAVASENPTQ 656 Query 650 RAAGPAAVVETDDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAA 709 R V V + E G G+ + P ALAPG P+PT + +SI + A+ Sbjct 657 RGTSSVKVTAVVKSEGLDVVTVEELLG--GDEYLDSPVALAPGRPIPTGRMEKSIAAAAS 714 Query 710 AVASGSPQLPSTALMDVLLRRPPRTRSGAALP---RSSDPVTDIAAAALDLDSSYLAVHG 766 + P+LP A +D+L R PRT SG+ LP ++ I AA LDLD SY+AV G Sbjct 715 GASESLPELPHIAAVDILRRSTPRTLSGSPLPPVGADNNYADAITAALLDLDDSYVAVQG 774 Query 767 PPGTGKTYTAARVIAELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHT 826 PPGTGKTYT ARV+ L+ +H WRIGVVAQSH+ VEN+L G++ AG+DP VAKK Sbjct 775 PPGTGKTYTGARVVKTLIEQHHWRIGVVAQSHSVVENMLGGILKAGVDPALVAKKGSRSK 834 Query 827 AGRWQSIDGSQYTEFIRDT--AGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANT 884 WQ I +Y FI + GCVIGGTAWDF+N +RVP SLDLLV+DEAGQF LANT Sbjct 835 TAEWQDIASEEYAGFIAEAEGVGCVIGGTAWDFSNTDRVPAGSLDLLVVDEAGQFALANT 894 Query 885 IAVAPAATNLLLLGDPQQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRM 944 IAVA +A NLLLLGDPQQLPQVSQGTHPEPVD SAL WL +G LP E GYFL++++RM Sbjct 895 IAVAISARNLLLLGDPQQLPQVSQGTHPEPVDESALGWLAEGHGALPPELGYFLEKTWRM 954 Query 945 HPAVCAAVSALSYEGRLCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAE 1004 HP +CA VSALSYEG+L S +A R+LDG GVHT V H+GNS SPEE++ I+ + Sbjct 955 HPDLCAPVSALSYEGKLHSQETVSAARKLDGLAAGVHTVYVDHRGNSTYSPEESQEIVRQ 1014 Query 1005 LRQLLGSPWTDE---HGTRPLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVD 1061 ++ LLG+PWTD GTRPL SD+LV+A YNAQV V R L AGL V VGTVD Sbjct 1015 IQGLLGTPWTDPSEFEGTRPLEQSDILVVAAYNAQVGTVERDLTEAGL---TEVEVGTVD 1071 Query 1062 KFQGGQAPVVFISMTASSADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPA 1121 KFQG +A V +SM AS+ +DVPRG+SFLL+RNRLNVAVSR ++ A+IVRS LTQY+P+ Sbjct 1072 KFQGREAAVAIVSMAASAVEDVPRGMSFLLSRNRLNVAVSRGKWCAIIVRSHALTQYMPS 1131 Query 1122 TPDGLVDLGAFLGLTS 1137 TP GLV+LGAF+ LTS Sbjct 1132 TPAGLVELGAFMRLTS 1147 >gi|254819461|ref|ZP_05224462.1| hypothetical protein MintA_06029 [Mycobacterium intracellulare ATCC 13950] Length=700 Score = 1086 bits (2808), Expect = 0.0, Method: Compositional matrix adjust. Identities = 526/700 (76%), Positives = 599/700 (86%), Gaps = 0/700 (0%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 +FVTGDSIVYSASDLAAAARC++ALLR+FDAKLGRGPA A++DEL+ R A LG HE R Sbjct 1 MFVTGDSIVYSASDLAAAARCEFALLRDFDAKLGRGPATAIEDELLTRTATLGDEHERRE 60 Query 61 LDQLRHEFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFL 120 L +LR FGDAVA+IGRPAYTPAGLAAA DAT RA+A+HAP VYQAAMFDGRF+GFADFL Sbjct 61 LARLRERFGDAVAVIGRPAYTPAGLAAATDATLRAVADHAPAVYQAAMFDGRFLGFADFL 120 Query 121 IRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGE 180 +RDG +YRV DTKLARS VTALLQLAAYAD L SGVPVA +AEL LGDGT VR+RV + Sbjct 121 VRDGEQYRVVDTKLARSEKVTALLQLAAYADVLAASGVPVAPEAELRLGDGTAVRHRVSD 180 Query 181 LIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRV 240 L+PVYR QR LQRLLD H+ +G AVRWDDE V ACF CP C E+LRA+DD+LLV G+RV Sbjct 181 LVPVYRLQRVRLQRLLDDHHASGAAVRWDDESVAACFHCPSCIEQLRAADDVLLVAGLRV 240 Query 241 RQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 QRDKL +AGITT+ ELA H+ PVP L + LT QAKLQ+RQRDTG PQ +++D +P Sbjct 241 SQRDKLFKAGITTVTELAAHSGPVPELAAGVVTALTTQAKLQVRQRDTGVPQVQVIDAQP 300 Query 301 LTLLPEPNPGDLFFDFEGDPLWTADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQA 360 L LLPEP+PGDLFFDFEGDPLWTADG++WGLEYLFGVLEAG G FRPLWAH+R ER+A Sbjct 301 LALLPEPDPGDLFFDFEGDPLWTADGREWGLEYLFGVLEAGPTGRFRPLWAHNRADERKA 360 Query 361 LTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPL 420 LTDFLA+VA+RRRR PNMHIYHYAPYEKTALLRL GRYG+GED+VD+LLR+G LVDLYPL Sbjct 361 LTDFLAMVAKRRRRRPNMHIYHYAPYEKTALLRLAGRYGVGEDEVDELLRSGTLVDLYPL 420 Query 421 VRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVL 480 VR+SIRVG +SFSLKALEPLY+G+Q R+GDVTTA SI SYARYCELRA GR DEAA+VL Sbjct 421 VRRSIRVGAESFSLKALEPLYMGSQLRAGDVTTATGSITSYARYCELRAEGRGDEAASVL 480 Query 481 KEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGD 540 KEIE YNHYDCRST+ LR+WL++RA+E+GV PIGAQPV D + ++D D LA L+ FTG Sbjct 481 KEIEDYNHYDCRSTQELRNWLMLRAYESGVVPIGAQPVGDGNTVEDRDELAVTLAAFTGA 540 Query 541 AAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVT 600 A ERTPEQTAVAL+AAARGYHRREDKPFWWAHFDRLN+PVDEW+D+TDVF+A EASV+ Sbjct 541 AGIDERTPEQTAVALVAAARGYHRREDKPFWWAHFDRLNFPVDEWADNTDVFVAHEASVS 600 Query 601 VDWHMPPRARKPQRRVRLTGELARGDLNGNVFALYEPPAPPGMTDNPDRRAAGPAAVVET 660 VDWH PPRARKPQRR+ L GELARGDL +VFALY+PPAPPGMTD+PDRRAAG A VVE Sbjct 601 VDWHTPPRARKPQRRLELRGELARGDLKSDVFALYKPPAPPGMTDSPDRRAAGRATVVEA 660 Query 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTAL 700 DDP VPT VV++ER G DG F QLPFAL PGPP+PTTAL Sbjct 661 DDPAVPTTVVVLERVGGDGKPFHQLPFALTPGPPIPTTAL 700 >gi|333919772|ref|YP_004493353.1| hypothetical protein AS9A_2104 [Amycolicicoccus subflavus DQS3-9A1] gi|333481993|gb|AEF40553.1| hypothetical protein AS9A_2104 [Amycolicicoccus subflavus DQS3-9A1] Length=1169 Score = 1029 bits (2660), Expect = 0.0, Method: Compositional matrix adjust. Identities = 582/1163 (51%), Positives = 725/1163 (63%), Gaps = 41/1163 (3%) Query 8 IVYSASDLAAAARCQYALLREFDAKLGRGPAVA-VDDELMARAAVLGSAHEGRRLDQLRH 66 +VYSA+DLA AA ++ LR D KLGR PA A +DD + AR A LG AHE R L++ Sbjct 1 MVYSATDLAVAAASEFDFLRTLDMKLGRYPAAAAIDDPMFARTAELGDAHEQRLLEKFVD 60 Query 67 EFGDAVAIIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFLIRD--- 123 + GD V +GRP +T GL AA T AI ++APV+YQ FDG F GF DFL+R+ Sbjct 61 QHGDKVVSLGRPMFTEEGLVAARAETFEAIDDNAPVIYQGTFFDGSFAGFCDFLVREDTS 120 Query 124 -GHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGELI 182 G Y V DTKL+R V ALLQLAAYAD L+ +GV V+ L LGDGTI +R+ +++ Sbjct 121 GGSAYAVYDTKLSRHARVPALLQLAAYADQLISAGVAVSPVMHLVLGDGTITDHRLSDVL 180 Query 183 PVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRVRQ 242 PVYR +RA L +L GH V W D R A R + + + D++LV G+ Q Sbjct 181 PVYRQRRARLDMILTGHLAQNAPVAWGDPRYSADVRSDLAADEIARTRDVILVAGLTTVQ 240 Query 243 RDKLLEAGITTIAELA--DHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRP 300 R +L AG+ T+ ELA D VPG++ +AL +L +QA Q+ + TG P + + +P Sbjct 241 RARLEWAGVRTLDELAALDPETTVPGISPHALARLRSQAGAQVEEERTGQPHYVVHNPAA 300 Query 301 LTLLPEPNPGDLFFDFEGDPLWTADGK-QWGLEYLFGVLEAGRAGV---------FRPLW 350 L LP+P+PGD+FFDFEGDPLW DG WGLEYLFG++EA A + FR W Sbjct 301 LRELPQPSPGDIFFDFEGDPLWAEDGSTDWGLEYLFGIVEAPDARIDHDPGVHTDFRAFW 360 Query 351 AHDRTAERQALTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLR 410 AHDR E++AL FL VA RR R P+MH+YHYAPYEKTAL RLVGR+GI E +DDLLR Sbjct 361 AHDRAEEKRALHAFLEYVAERRARFPDMHVYHYAPYEKTALRRLVGRHGICEAALDDLLR 420 Query 411 NGVLVDLYPLVRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAA 470 V VDLYPLVRK++RVG S+S+K LEPLY+G R GDVTTA DSI YAR+ L + Sbjct 421 ANVFVDLYPLVRKAVRVGKSSYSIKKLEPLYMGEHLRGGDVTTAGDSIAEYARFTGLAES 480 Query 471 GRIDEAATVLKEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPID---DG 527 G +EAA VL IE YN YDC ST LR+WL A GV P+ V AD + D Sbjct 481 GAAEEAAAVLASIEDYNRYDCDSTLHLRNWLARCAQSEGV-PLAIPVVEAADDANGEFDT 539 Query 528 DSLASVLSKFTGDAAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSD 587 L L + G+ R+ EQ A+ AAA YH REDKPFWW HFDRL + ++ Sbjct 540 SPLEVQLLDYAGELPRMRRSAEQQTAAMFAAAMNYHWREDKPFWWGHFDRLTASASDLAE 599 Query 588 STDVFLASEASVTVDWHMPPRARKPQRRVRLTGELARGDL---NGNVFALYEPPAP---- 640 S++ F+ V DW M PR R P+R +R+ GE G G+VFALY+ P+P Sbjct 600 SSEAFVVDGCDVVGDWAMGPRQRVPRRVLRIAGEAPHGATLRAGGDVFALYDAPSPQSAR 659 Query 641 ---PGMTDNPDRRAAGPAAVVETDDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPT 697 PG + E P V + E+ + P A+ PGPP Sbjct 660 QPVPGARGFTTAKLLSSTRCHELGLPVSDECVYLEEKCPKGADPHSDAPVAITPGPPPSA 719 Query 698 TALRESIESTAAAVASGSPQLPSTALMDVLLRRPPRTRSGAALPRSSDP---VTDIAAAA 754 L+++IE A + A PQ+P TA +DVL R PPRT SGA + P I A Sbjct 720 QPLKDAIERVAESFAGQWPQIPRTAAVDVLRRIPPRTLSGAGPVAPTSPNETAAAIIATL 779 Query 755 LDLDSSYLAVHGPPGTGKTYTAARVIAELVTEHAWRIGVVAQSHATVENLLEGVISAGLD 814 DLD SYLAV GPPGTGKTYT ++VIAELV ++ WR+GVVAQSH+ VEN+L+ ++ A + Sbjct 780 CDLDHSYLAVQGPPGTGKTYTGSKVIAELVLKYGWRVGVVAQSHSVVENMLDCIVEAHVP 839 Query 815 PGQVAKKPHDHTAGRWQSIDGSQYTEFIRDTA--GCVIGGTAWDFANGNRVPKASLDLLV 872 QV K + + W ++ + G V+GGTAW FAN N+VP SLDLLV Sbjct 840 GSQVFKPDNRLGSSLWTTLGSRNAIAGALEGCDGGAVVGGTAWTFANPNQVPAGSLDLLV 899 Query 873 IDEAGQFCLANTIAVAPAATNLLLLGDPQQLPQVSQGTHPEPVDTSALSWLVDGQHTLPD 932 IDEAGQF LANTIAV+ AA NL+LLGDPQQLPQVSQGTHPEPVD SAL WL+ T+P Sbjct 900 IDEAGQFSLANTIAVSAAARNLMLLGDPQQLPQVSQGTHPEPVDESALGWLIGDHGTIPS 959 Query 933 ERGYFLDRSYRMHPAVCAAVSALSYEGRLCSHTERTAVRRLDGYPPGVHTRGVHHKGNSI 992 E GYFL+R++RMHPA+C VS LSYEGRL S TA R L G PPG+ T V H GNS Sbjct 960 EFGYFLERTFRMHPALCRVVSDLSYEGRLTSEESVTAARLLTGIPPGLKTITVPHTGNST 1019 Query 993 ESPEEAEAILAELRQLLGSPWTDE--HGTRPLAASDVLVLAPYNAQVALVRRRLASAGLG 1050 S EEA I AE++Q+LG+PW + RPL DV+V+APYNAQV + L AGL Sbjct 1020 ASGEEARVICAEIQQILGTPWRPKPSAAERPLEQHDVIVVAPYNAQVNTILAELRMAGL- 1078 Query 1051 GADGVRVGTVDKFQGGQAPVVFISMTASSADDVPRGISFLLNRNRLNVAVSRAQYAAVIV 1110 D V GTVDKFQG QA V +SMTAS+ +DVPRG+SFLLNRNRLNVA+SR Q+ A+IV Sbjct 1079 --DRVMAGTVDKFQGRQAAVTVVSMTASAIEDVPRGMSFLLNRNRLNVAISRGQWLAMIV 1136 Query 1111 RSELLTQYLPATPDGLVDLGAFL 1133 RS LT+++P TP GL +LGAFL Sbjct 1137 RSPTLTEFMPTTPHGLEELGAFL 1159 >gi|269793599|ref|YP_003313054.1| nuclease (RecB family) [Sanguibacter keddieii DSM 10542] gi|269095784|gb|ACZ20220.1| predicted nuclease (RecB family) [Sanguibacter keddieii DSM 10542] Length=1250 Score = 983 bits (2541), Expect = 0.0, Method: Compositional matrix adjust. Identities = 595/1243 (48%), Positives = 742/1243 (60%), Gaps = 108/1243 (8%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGRR 60 +F+ D ++ SA+DLA AA C+ ALL + D +LGR P D ++ R LG HE R Sbjct 1 MFLRDDVLISSATDLAVAAECELALLTDMDERLGRSPRTVTADAMLERTTGLGLEHEDRV 60 Query 61 LDQLRHEFGDA--------------------VAIIGRPAYTPAGLAAAADATRRAIANHA 100 L + V+ G+ T L AA D T A+ + A Sbjct 61 LSGYLERLAASAARAEGSEDFAFTASAVPGYVSFAGQDWSTLDDLRAAHDRTVAALRDGA 120 Query 101 PVVYQAAMFDGRFVGFADFLIRDGHR-------------------------YRVADTKLA 135 +VYQ +FDGRF+G DFL+ D V DTKLA Sbjct 121 ALVYQGVLFDGRFLGRPDFLVDDARLGAEAPSAAADVPDGTEHGTPPSTPLVTVVDTKLA 180 Query 136 RSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGELIPVYRSQRALLQRL 195 R VTALLQLAAYAD LV +G+ VA L GDG++ + + +++PVYR +RA L+R+ Sbjct 181 RHAKVTALLQLAAYADQLVRAGLDVAPSLRLVHGDGSVSEHPLADVLPVYRERRARLERV 240 Query 196 LDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRVRQRDKLLEAGITTIA 255 +D H V W DER AC RCP C+ + A DLLLV GMR QR +L AGITTI Sbjct 241 VDAHLADEGPVAWGDERFSACGRCPACSRHVVAERDLLLVAGMRTTQRTRLRAAGITTID 300 Query 256 ELADHTAPVPGLTTNALGKLTAQAKLQIRQR-----DTGAPQF--EIVDPRPLTLLPEPN 308 LA T PV G+ L L QA +Q+ Q G P E+V L L P+ Sbjct 301 ALASSTGPVDGVPQRILTDLRTQAAMQVAQDARPPLPDGRPDVRAELVAREALEALHAPD 360 Query 309 PGDLFFDFEGDPLWTADGK-QWGLEYLFGVLEA----GRAGVFRPLWAHDRTAERQALTD 363 PGD+FFDFEGDPLWTA G WGLEYLFGV+EA G VFR WAHDR E+QAL D Sbjct 361 PGDVFFDFEGDPLWTAPGSTDWGLEYLFGVVEAPVSPGDEPVFRAFWAHDRAQEKQALVD 420 Query 364 FLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPLVRK 423 F A + RR + P MH+YHYAPYEKTAL RLVGR+G+GE+ +DDLLR GVLVDL+ VR+ Sbjct 421 FFAYLRDRRAQFPGMHVYHYAPYEKTALGRLVGRHGVGEEQLDDLLRQGVLVDLHATVRQ 480 Query 424 SIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVLKEI 483 S+RV S+SLK LEPLY+G + R D+ AADSI YA C R GR DEAA L I Sbjct 481 SVRVSQPSYSLKKLEPLYMGDELRDDDLDNAADSIAQYAAACAARDEGRSDEAAAALDLI 540 Query 484 EGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQ-----------PVPDADPIDDG---DS 529 GYN YDC ST LRDWL A E G+ GA+ PD DP + D Sbjct 541 AGYNRYDCVSTLRLRDWLRGLATEHGLRLRGAEDPADPDALVDAAAPDHDPAEPDEPTDP 600 Query 530 LASVLSKFTGDA---AAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWS 586 L L GDA A +R P+ A+ LLAAA GYHRREDKPFWWAHFDRL P DEW+ Sbjct 601 LVDALHAIVGDARDLAPADRRPDDQALLLLAAALGYHRREDKPFWWAHFDRLTAPSDEWA 660 Query 587 DSTDVFLASEASVTVDWHMPPRARKPQRRVRLTGELARGDLNG---NVFALYEPPAPPGM 643 S DV +A E +V DW R +R +RL GELA G G V+ +YE P P G+ Sbjct 661 SSRDVLVADEVTVLRDWFKEGSQRSLRRELRLVGELATGSSLGAGSGVWCIYEAPLPEGL 720 Query 644 TD--NPDRRAAGPAAVVETDDPTVPTEVVIVERTGSDG-NTFQQLPFALAPGPPVPTT-- 698 R+ +G + VV + +VV+VE G + ++P + PG PVPT Sbjct 721 VPPLGGVRQVSGTSTVVSVETDDAGRDVVVVEEVLKKGLEPYTEVPMGVGPGSPVPTGLV 780 Query 699 --ALRESIESTAAAVASGSPQLPSTALMDVLLRRPPRTRS-----------GAAL---PR 742 ALRE E ++ G+ P+ +DVL R PP+ ++ GAAL P Sbjct 781 EGALREVAEHAVRSLDGGAGSFPAQPALDVLRRLPPQLKADDRAEVSGDVDGAALGLPPV 840 Query 743 SSDP---VTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVIAELVTEHAWRIGVVAQSHA 799 S ++ I A LD SYLAV GPPGTGKTY AARVI LV W +GVVA SHA Sbjct 841 GSGKGAYISAITDAVRRLDRSYLAVQGPPGTGKTYVAARVIERLV-RSGWHVGVVAPSHA 899 Query 800 TVENLLEGVISAGLDPGQVAKKPH-DHTAGRWQSIDGSQYTEFIRDTA--GCVIGGTAWD 856 VE+LL+ V+ AG+ +V KKP D + W +I + +F+ + GCVIGGTAWD Sbjct 900 VVEHLLDKVVEAGVPAYRVGKKPQGDPSDHAWTAIGDKKQGKFLGEHKDHGCVIGGTAWD 959 Query 857 FANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDPQQLPQVSQGTHPEPVD 916 FAN N++ + SLDLLV+DEAGQF LANT+AV+ AA NLLLLGDPQQLPQVSQGTHPEPVD Sbjct 960 FANANKIGRRSLDLLVVDEAGQFSLANTVAVSAAAENLLLLGDPQQLPQVSQGTHPEPVD 1019 Query 917 TSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGRLCSHTERTAVRRLDGY 976 SAL W+ DG LP E GYFL+R++RMHP +CA VS LSYEGRL S + T R L+G Sbjct 1020 GSALGWVADGHDALPPELGYFLERTWRMHPDLCAPVSRLSYEGRLRSEEDATTARHLEGL 1079 Query 977 PPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGTRPLAASDVLVLAPYNAQ 1036 PGVH V H+GN++ S EEA ++ +++ LLG W D RPLA SD+LV+A YNAQ Sbjct 1080 APGVHVVSVPHRGNAVSSEEEAAVVVEQVQSLLGRTWHDGERGRPLAPSDLLVVAAYNAQ 1139 Query 1037 VALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSADDVPRGISFLLNRNRL 1096 ALV + L AG+ +GV+VGTVDKFQG +A VV ++M ASS ++VPRG+ FLL+RNR+ Sbjct 1140 RALVEKHLRDAGV---EGVKVGTVDKFQGQEAAVVLVTMAASSVEEVPRGMGFLLSRNRV 1196 Query 1097 NVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS 1139 NVAVSR Q+AAV+VRS LT Y+P TP+ L +LGAF+GL +++ Sbjct 1197 NVAVSRGQWAAVVVRSPALTDYVPTTPEALCELGAFIGLCASA 1239 >gi|296131070|ref|YP_003638320.1| RecB family nuclease, putative [Cellulomonas flavigena DSM 20109] gi|296022885|gb|ADG76121.1| RecB family nuclease, putative [Cellulomonas flavigena DSM 20109] Length=1228 Score = 952 bits (2460), Expect = 0.0, Method: Compositional matrix adjust. Identities = 600/1237 (49%), Positives = 729/1237 (59%), Gaps = 116/1237 (9%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVD-DELMARAAVLGSAHEGR 59 + + ++ YSASDL AAARC++A+LR DA+LGRGPA D D ++AR A LG HE R Sbjct 2 ILLDDGTLTYSASDLTAAARCEHAVLRALDARLGRGPAAEPDADVVLARVAHLGDEHEQR 61 Query 60 RLDQLRHEFGDAVAIIGRPAYTPAGLA---AAADATRRA--IANHAP---------VVYQ 105 L L +G + RP T GLA A D RA A HA VV+Q Sbjct 62 VLRGLVERYG-----VWRPG-TRGGLAQVPATRDPASRAHLEAAHAATLDRLGSADVVHQ 115 Query 106 AAMFDGRFVGFADFLIRDGH-RYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADA 164 AA FDGRFVG ADFL+RD + V D KLAR+ TALLQ+AAYAD L +GVPVA + Sbjct 116 AAFFDGRFVGRADFLVRDDDGAWSVRDAKLARNAQPTALLQVAAYADQLARAGVPVAREV 175 Query 165 ELELGDGTIVRYRVGELIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTE 224 +L LGD + R+ V +L+PVYR +RA LQ LLD H V W D R AC RC CT Sbjct 176 QLVLGDAAVTRHAVADLVPVYRERRARLQELLDAHRAQDGPVTWGDTRWAACGRCSLCTA 235 Query 225 RLRASDDLLLVGGMRVRQRDKLLEAGITTIAELA--DHTAPVPGLTTNALGKLTAQAKLQ 282 L A D+ LV G+ RQR L AG+ TI ELA V GL+ + L ++ QA+LQ Sbjct 236 ELEARRDVTLVAGVYERQRALLGAAGVATIDELAALPDDREVEGLSPDVLARVRLQARLQ 295 Query 283 IRQRDTGAPQFEIVD--------PRPLTLLPEPNPGDLFFDFEGDPLW-----TADGKQW 329 + Q A VD PR LLP P+PGD+FFDFEGDPLW + W Sbjct 296 LEQEARNADPAHPVDVPWALTHPPRVAALLPPPDPGDIFFDFEGDPLWYDAAMAGEPDAW 355 Query 330 GLEYLFGVLEAGRA----GVFRPLWAHDRTAERQALTDFLAIVARRRRRHPNMHIYHYAP 385 GLEYLFGV+E A F WAHDR ER AL +FLA +A RR R P MH+YHYA Sbjct 356 GLEYLFGVVENPPAPEAEAPFVAFWAHDRAEERVALREFLAYLADRRARFPGMHVYHYAA 415 Query 386 YEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPLVRKSIRVGTDSFSLKALEPLYLGTQ 445 YEKT L RL R+G GE VD LLR G+LVDLY V+ +R G S+SLK LEPLY+ T Sbjct 416 YEKTTLRRLAARHGEGEAQVDGLLREGLLVDLYTAVKAGVRTGQRSYSLKKLEPLYMATG 475 Query 446 PRSGDVTTAADSINSYARYCELRAAGRIDEAATVLKEIEGYNHYDCRSTRALRDWLLMRA 505 R VT AADSI YA R AGR+D+ +K IE YNHYDC ST LRDWLL R Sbjct 476 -RGDGVTNAADSIVEYAEAVAARDAGRLDDWNERIKAIEVYNHYDCDSTLGLRDWLLARL 534 Query 506 WEAGVTPIGAQPV---PDA----------DPIDDGDSLASVLSKFTGDAAAGERTPEQTA 552 E GV P ++PV P+A DP++D L ++ G+ RTP + A Sbjct 535 AEVGVAP--SRPVVLDPEAEARAAELGAPDPLED--ELLALAGPGPGEGVV--RTPGRQA 588 Query 553 VALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASE---ASVTVDWHMPPRA 609 VAL+ AA YH+REDKP+WW HFDRL+ +W++ +V LA V DWH+PP Sbjct 589 VALVGAALRYHQREDKPYWWGHFDRLSAHPSDWTERRNVLLADRPGAVEVVTDWHLPPGK 648 Query 610 RKPQRRVRLTGELARG-DL--NGNVFALYEPPAPPGMTDNPD--RRAAGPAAVVETD--- 661 + +R +R+TG L G DL LY+ P P + + D R V+E Sbjct 649 QVERRVLRMTGRLEPGSDLRPGAQAVGLYDAPLPACVRTSVDGPRGWCERMTVLEVRADV 708 Query 662 DPTVPTEVVIVERTGSDGNT-FQQLPFALAPGPPVPTTALRESIESTAAAVASG------ 714 + P +V++VE T G+ F +LP ALAP P+ T LRE+I A V Sbjct 709 EGRSPRDVLVVEETRPKGSEPFAELPMALAPAGPIGTAPLREAIRRLAERVRDAVADGSA 768 Query 715 -----------------SPQLPSTALMDVLLRRPPRTRSGAALPRSSDPVTDIAA-AALD 756 LP +A++D+ R PPRTRSGA LP + + D+ A LD Sbjct 769 ATGDAAAATGATPDDAPDVSLPRSAVLDLARRTPPRTRSGAPLPTADGDLVDVLTRAVLD 828 Query 757 LDSSYLAVHGPPGTGKTYTAARVIAELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPG 816 LD SYLAV GPPGTGKTYT ARVIA LV E WR+GVVAQSHA VEN+L GV AG+ G Sbjct 829 LDDSYLAVQGPPGTGKTYTGARVIAALV-ERGWRVGVVAQSHAVVENMLRGVAGAGVPAG 887 Query 817 QVAKK----PHDHTA-GRWQSIDGSQYTEFIR------DTAGCVIGGTAWDFANGNRVPK 865 +AKK D TA W + + F D AG V+GGTAWD + R+P Sbjct 888 AIAKKLPTDGRDATADAPWTWVPDKGFGAFWSAHPGGADGAGAVLGGTAWDLVSTTRLPS 947 Query 866 ASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDPQQLPQVSQGTHPEPVDTSALSWLVD 925 A LDLLV+DEAGQF LA T AVA +A NLLLLGDPQQLPQVSQGTHPEPVD SAL WL D Sbjct 948 APLDLLVVDEAGQFALATTFAVAGSARNLLLLGDPQQLPQVSQGTHPEPVDRSALGWLTD 1007 Query 926 GQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGRLCSHTERTAVRRLDGYPPGVHTRGV 985 G TLP E GYFL +YR+HP +CAAVS L+YEGRL S A R LDG P GVH V Sbjct 1008 GHDTLPAELGYFLPVTYRLHPELCAAVSTLAYEGRLVS-APAAAARSLDGVPAGVHGVLV 1066 Query 986 HHKGNSIESPEEAEAILAELRQLLGSPWTDEHGT---RPLAASDVLVLAPYNAQVALVRR 1042 H+GN++ SPEEAE + + L+G W D RPL +DV+V+A YNAQV VRR Sbjct 1067 EHEGNAVASPEEAEVVARTVAHLVGRTWRDPAAAAPERPLTPADVVVVAAYNAQVWTVRR 1126 Query 1043 RLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSADDVPRGISFLLNRNRLNVAVSR 1102 L +AG RVGTVD+FQG +APVV ++ ASS VPRG+ FLL+RNR+NVAVSR Sbjct 1127 ALDAAGF---TATRVGTVDRFQGQEAPVVVVTTAASSPSQVPRGLDFLLDRNRINVAVSR 1183 Query 1103 AQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS 1139 Q+AA +VRS L+ LP P+ L LGAF+GLT+ S Sbjct 1184 GQWAAFVVRSTRLSHTLPHRPESLERLGAFVGLTTRS 1220 >gi|308176400|ref|YP_003915806.1| hypothetical protein AARI_06070 [Arthrobacter arilaitensis Re117] gi|307743863|emb|CBT74835.1| conserved hypothetical protein [Arthrobacter arilaitensis Re117] Length=1151 Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust. Identities = 549/1170 (47%), Positives = 722/1170 (62%), Gaps = 54/1170 (4%) Query 1 VFVTGDSIVYSASDLAAAARCQYALLREFDAKLGRGPAV-AVDDELMARAAVLGSAHEGR 59 +F D ++SASDL+ + C Y L D KLGR P V DE++ R A LG AHE Sbjct 1 MFFLEDKFIFSASDLSISVDCNYQSLYLLDVKLGRRPRPDGVRDEMLERTAALGDAHEQN 60 Query 60 RLDQLRHEFGDAVAIIG--------RPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDG 111 L L +G+ I G RP + AGL AA + T + + + A V++QA FDG Sbjct 61 VLKGLIATYGEYDPIAGTGVKQFTDRPKMSQAGLRAAHEETMKVLRSGADVIFQATFFDG 120 Query 112 RFVGFADFLIRDGH-RYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGD 170 +F+GFADFL+RD + V DTKLAR V+ALLQ+AAYAD ++ G+PV++ A L LGD Sbjct 121 KFLGFADFLVRDQDGTWAVWDTKLARHARVSALLQIAAYADQMLAEGLPVSSSATLVLGD 180 Query 171 GTIVRYRVGELIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASD 230 GT +RV E++PV+R+QR +++ H +W+ + ++ C RC C E+ A+ Sbjct 181 GTHSVHRVDEVLPVFRAQRERFLKMVRNHLAGDQPAQWNSDALRLCGRCDFCEEQSLATR 240 Query 231 DLLLVGGMRVRQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDT-G 289 DLLLV GM + QR+KL GI TI +LA A PG +L ++T QAK+Q+ T G Sbjct 241 DLLLVAGMSMVQREKLRTRGIYTIDQLAQLEAE-PG---TSLQRVTEQAKMQLGLAKTDG 296 Query 290 APQ---FEIVDPRPLTLLPEPNPGDLFFDFEGDPLWT--ADGKQWGLEYLFGVLEAG-RA 343 + Q + + + +P++ LP P+ GD+FFDFEGDPL+ +DG WGLEYLFGV+E Sbjct 297 SVQGVSYRVKNEKPISSLPRPDQGDIFFDFEGDPLYQDPSDGS-WGLEYLFGVIEYDTNE 355 Query 344 GVFRPLWAHDRTAERQALTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGED 403 VF+P WAH R+ ERQA DF+A V RR+R P+M +YHYAPYEKTAL +L + GED Sbjct 356 PVFKPFWAHSRSEERQAFLDFIAYVEERRQRFPHMKVYHYAPYEKTALRKLSQVHIAGED 415 Query 404 DVDDLLRNGVLVDLYPLVRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYAR 463 +VD LR +LVDLY VR ++ V T S+S+K LEPLY+G RSGDVT A S+ +YA+ Sbjct 416 EVDQWLRENLLVDLYETVRNALVVSTRSYSIKKLEPLYMGEHLRSGDVTDAGASVVAYAQ 475 Query 464 YCELRAAGRIDEAATVLKEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDA-- 521 Y + R + A +L+ I YN YDC ST LRDWLL + EA T + P P A Sbjct 476 YMQARNSPDPAAAEAILESIADYNEYDCLSTLRLRDWLLSLSDEAPGT-LADMPEPPAAG 534 Query 522 ---DPIDDGDSLASVLSKFTGDAAAGERTPEQTAVALLAAARGYHRREDKPFWWAHFDRL 578 +P + L + L+ A + + A+A++AAA GY+RRE K FWW HFDRL Sbjct 535 EEYEPTPEELRLQNYLADLPHGQALSD---DDRAIAMVAAATGYNRREKKQFWWEHFDRL 591 Query 579 NYPVDEWSDSTDVFLASEASVTVDWHM-PPRARKPQRRVRLTGELARGDL---NGNVFAL 634 + P+D+WSD VF+ + DWH RAR R RL G LA G L +VFA+ Sbjct 592 SVPMDDWSDVRGVFIVDTGEILEDWHKATARARTYTRVTRLNGTLAEGSLLSPGSSVFAM 651 Query 635 YEPPAPPGM-TDNPDRRAAGPAAVVETDDPTVPTEVVIVERTGSDGNTFQQLPFALAPGP 693 ++ P P GM D+ R A A VVE + + I E++ + + LP AL P Sbjct 652 FDAPLPEGMEVDDSVRGGAFNATVVELGE----GWITIAEKSSAKIPEYGALPCALTPDK 707 Query 694 PVPTTALRESIESTAAAVASGSPQLPSTALMDVLLRRPPR--TRSGAALPRSSDPVTDIA 751 P+ T ++ +++ A V + P LP + +D+L R PPR T S P D I Sbjct 708 PLATMSIDAALKEIAQRVGATVPVLPERSGIDILRRIPPRLKTLSAPVEPSLVDGQAQIY 767 Query 752 AAAL----DLDSSYLAVHGPPGTGKTYTAARVIAELVTEHAWRIGVVAQSHATVENLLEG 807 A + DLD+SYLAV GPPGTGKT+ A+ VI EL+ EH W+IGVVAQSHA VEN+L Sbjct 768 PAVVQTLKDLDNSYLAVQGPPGTGKTFVASHVIRELI-EHGWKIGVVAQSHAVVENVLRK 826 Query 808 VISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTEFIRDTAGCVIGGTAWDFANGNRVPKAS 867 + AG+DP VAK+ W +E + G +IGGTAW G++VP+ S Sbjct 827 AVEAGVDPDVVAKEVKHDDPVPWSGTSKDSLSEVLGSADGALIGGTAWTL-TGSKVPEGS 885 Query 868 LDLLVIDEAGQFCLANTIAVAPAATNLLLLGDPQQLPQVSQGTHPEPVDTSALSWLVDGQ 927 LDLLVIDEAGQF LANT+AV+ AA NLLLLGDPQQLPQV+QGTHP+PVD SAL WL G+ Sbjct 886 LDLLVIDEAGQFSLANTLAVSRAARNLLLLGDPQQLPQVTQGTHPQPVDESALGWLSGGE 945 Query 928 HTLPDERGYFLDRSYRMHPAVCAAVSALSYEGRLCSHTERTAVRRLDGYPPGVHTRGVHH 987 LP E GYFL S+RMHPA+CA VSALSY+ +L S + +R L+G P GV T V H Sbjct 946 PVLPGELGYFLAASWRMHPALCAKVSALSYDHQLFS-ADAAGLRLLEGTPAGVETVFVEH 1004 Query 988 KGNSIESPEEAEAILAELRQLLGSPWTDEHGT--RPLAASDVLVLAPYNAQVALVRRRLA 1045 +GN++ SP+EAE I+ +R+ LG W+ G RPL +D+LV+A YNAQV LVR L Sbjct 1005 RGNTVSSPQEAETIVRLVREHLGMMWSPGAGKPARPLTVADILVVAAYNAQVNLVREVLE 1064 Query 1046 SAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSADDVPRGISFLLNRNRLNVAVSRAQY 1105 + GL V+VGTVDKFQG +AP+V ++M SSA D RGI FLLNRNR+NVA+SR Q+ Sbjct 1065 AEGLS---SVKVGTVDKFQGQEAPIVLVTMACSSAADASRGIEFLLNRNRVNVAISRGQW 1121 Query 1106 AAVIVRSELLTQYLPATPDGLVDLGAFLGL 1135 A+IVRSE LT YLP+ P L LGAF+ L Sbjct 1122 KAIIVRSEALTDYLPSNPSTLSQLGAFMAL 1151 >gi|119964334|ref|YP_946897.1| hypothetical protein AAur_1108 [Arthrobacter aurescens TC1] gi|119951193|gb|ABM10104.1| conserved hypothetical protein [Arthrobacter aurescens TC1] Length=1210 Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust. Identities = 555/1200 (47%), Positives = 691/1200 (58%), Gaps = 79/1200 (6%) Query 8 IVYSASDLAAAARCQYALLREFDAKLGRGPAVAV-DDELMARAAVLGSAHEGRRLDQLRH 66 +V+SASDL AA C+Y LLR+ D KLGR P A D ++ R A LG HE R LD Sbjct 15 LVFSASDLVVAATCEYQLLRKLDEKLGRTPKPAFATDAMLERTAKLGDVHEHRVLDDYVA 74 Query 67 EFGDAVA--------IIGRPAYTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFAD 118 EFG A ++ A A L+A + A+ + A VV+QAA FDG+F G +D Sbjct 75 EFGPWNAATRKGVYDVVPATAMDRATLSAKHAESIDALRSGADVVFQAAFFDGQFHGRSD 134 Query 119 FLI-RDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYR 177 FL+ R G +Y V DTKLAR VTALLQLAAY D L+ +G+ L LG+ + Sbjct 135 FLVKRPGGQYAVFDTKLARHAKVTALLQLAAYGDQLIRAGITPDPTVTLVLGNRVHSDHP 194 Query 178 VGELIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGG 237 + +++PV++ +R + + H + V W D R AC RC C+E++R DLL+V G Sbjct 195 LAQILPVFKERRERFLGMTEAHVSGAVPVAWGDSRYSACGRCDYCSEQVRLHRDLLMVAG 254 Query 238 MRVRQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQI-------------R 284 MRV +R KL+EAG+TTI ELA +P L +L QA+LQ + Sbjct 255 MRVSRRKKLIEAGVTTIDELA----ALPAAGDATLLRLREQARLQTGTGTPDGTVKYTDK 310 Query 285 QRDTGAPQFEIVDPRPLTLLPEPNPGDLFFDFEGDPLWT--ADGKQWGLEYLFGVLEA-- 340 +T A + ++ L LP P+PGD+FFDFEGDPLW GK WGLEYLFGV+E Sbjct 311 SGETKAISYNVLPDNTLGRLPAPDPGDIFFDFEGDPLWQDPVTGK-WGLEYLFGVIENPV 369 Query 341 --GRAGVFRPLWAHDRTAERQALTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRY 398 G VFRP WAH R E QA DFL VA+RR +P MHIYHYA YEKTAL L + Sbjct 370 EPGADPVFRPFWAHSRAEEGQAFVDFLDYVAKRRASYPGMHIYHYAAYEKTALRNLSLTH 429 Query 399 GIGEDDVDDLLRNGVLVDLYPLVRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSI 458 +GE VDDLLR GVLVDLY VR SIR+ +S+S+K LEPLY+G RSGDVT A S+ Sbjct 430 VVGESAVDDLLRQGVLVDLYDTVRHSIRISENSYSIKKLEPLYMGQHLRSGDVTDAGASV 489 Query 459 NSYARYCELRAAGRIDEAATVLKEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPV 518 +YA YC R G D+AA +L+ I YN YDC ST LR+WLL RA E + GA Sbjct 490 VAYADYCTARDIGNSDQAAVILEGIRDYNEYDCLSTLELRNWLLARAAERSIVTGGADEA 549 Query 519 PDADPIDDGDS----LASVLSKFTGDAAAG----ER-TPEQTAVALLAAARGYHRREDKP 569 P AD D A+ K D AG ER TP+ A+ ++AA GYHRREDK Sbjct 550 PPADTESDNTEPDQYEAAPEEKALFDYLAGLPEDERATPDSRAIGIVAAGVGYHRREDKQ 609 Query 570 FWWAHFDRLNYPVDEWSDSTDVFLASEASVTVDWHMPPRARKPQRRVRLTGELARG---D 626 WW HFDRL P +W D D+F+ A + DW P P R V+L G G + Sbjct 610 HWWGHFDRLEKPTSQWPDERDLFVVDHAELLQDWAKPTPRSNPARLVKLYGRSGDGAGLE 669 Query 627 LNGNVFALYEPPAPPGMTDNPD----RRAAGPAAVVETDDPTVPTEVVIVERTGSDGNTF 682 F +Y PP P + R V E D V I E D F Sbjct 670 PGKKYFRMYGPPLPDSLQAKESAALGRAGWNGTLVTEVGDDEDFETVTIAEGLRKDSTEF 729 Query 683 QQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPSTALMDVLLRRPPRTRSGAALPR 742 QLP AL P PP+ T R ++ + A +++ P P +D++ R+PP+ RS ALP Sbjct 730 SQLPMALTPDPPIATNGQRAALAALATKLSASLPLWPRDCSLDLVRRQPPKLRSLPALPS 789 Query 743 SS---DPVTD-IAAAALDLDSSYLAVHGPPGTGKTYTAARVIAELVTEHAWRIGVVAQSH 798 + D D I AA DLD+SYLAV GPPG+GKTY + VIA LV W++GVVAQSH Sbjct 790 VNAGPDGYIDAITAAVEDLDNSYLAVQGPPGSGKTYVGSHVIARLVAA-GWKVGVVAQSH 848 Query 799 ATVENLL-EGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTEFIRDTAGCVIGGTAWDF 857 A VEN+L V AG+DP +VAK+ W E + G +IGGTAW Sbjct 849 AVVENMLCAAVDKAGVDPRRVAKEVKHDDPVPWAQCAKGDVEELLSKPGGALIGGTAWTM 908 Query 858 ANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDPQQLPQVSQGTHPEPVDT 917 G+ VP SLDLLVIDEAGQF LANT+AV+ AA LLLLGDPQQLPQV+QG HPEPVD Sbjct 909 V-GSSVPAGSLDLLVIDEAGQFSLANTMAVSRAAKRLLLLGDPQQLPQVTQGKHPEPVDE 967 Query 918 SALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGRLCSHTERTAVRRLDGYP 977 SAL WL DG +TLP E GYFL S+RMHP +C+AVS LSY+ RL R LDG Sbjct 968 SALGWLSDGFNTLPAELGYFLALSWRMHPELCSAVSELSYDNRL-EAAPAAKERHLDGAA 1026 Query 978 PGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHGT------------------ 1019 PG+ V H GNS SPEEA ++ +++ +G W D Sbjct 1027 PGISCVYVPHTGNSTSSPEEAAEVVRQVQAHVGLSWIDPSQPAETQPGETQPTETQPAEG 1086 Query 1020 RPLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASS 1079 RPL +D+LV+A YNAQV L++ L AGLG VRVGTVDKFQG +APVV +SM AS+ Sbjct 1087 RPLEETDILVVAAYNAQVQLIKHHLRGAGLG---KVRVGTVDKFQGQEAPVVIVSMAASA 1143 Query 1080 ADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS 1139 A +VPRG+ FLL+RNR+NVAVSR Q+ AV+VRS LT YLP P+GL +LG F+ L S Sbjct 1144 AGEVPRGMEFLLSRNRINVAVSRGQWRAVVVRSPELTNYLPTHPEGLENLGGFVALCQRS 1203 >gi|84497795|ref|ZP_00996592.1| hypothetical protein JNB_16948 [Janibacter sp. HTCC2649] gi|84381295|gb|EAP97178.1| hypothetical protein JNB_16948 [Janibacter sp. HTCC2649] Length=1203 Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust. Identities = 560/1185 (48%), Positives = 712/1185 (61%), Gaps = 66/1185 (5%) Query 8 IVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMA-RAAVLGSAHEGRRLDQLRH 66 ++ S SDL A++C++AL+RE D LGR P +ELM R LG AHE + L +L Sbjct 10 LILSPSDLRLASQCEFALVRELDVTLGRAPKPPQTEELMMERLKELGDAHERQELLRLSA 69 Query 67 EFGDAVAIIGRPAYTPAGLAAAADATRRAI-ANHAPVVYQAAMFDGRFVGFADFLIRDGH 125 V RPAY A L AA + T + + VV+QA FDG VG ADFL R Sbjct 70 AHPGRVKQFPRPAYDLASLTAAHETTIATLRGDDTDVVFQATFFDGGLVGHADFLERTDD 129 Query 126 RYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGELIPVY 185 + V DTKLARS +V ALLQ+AAYA L +GVP A A L LG G + + +++PVY Sbjct 130 GWLVCDTKLARSASVPALLQIAAYAAQLRSAGVPTAPVARLVLGSGVSTDHLLDDILPVY 189 Query 186 RSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRVRQRDK 245 ++RA L+ +L H T +W D R AC RC C A+ D+LLV G+R+ QR + Sbjct 190 AARRARLESVLAEHRTESGLAQWGDARWLACGRCEVCEAEAEAARDVLLVAGVRLPQRRR 249 Query 246 LLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQR--DTGAPQFEIVDPRPLTL 303 LLEAG++TI +LA T PVP + + L +L QA+LQ+ Q G E+ P L Sbjct 250 LLEAGVSTIEQLAVRTEPVPDVRESTLDRLREQARLQLVQEADPDGRVVAEVTSPAALRA 309 Query 304 LPEPNPGDLFFDFEGDPLWTADGKQ-WGLEYLFGVLE-------AGRAGVFRPLWAHDRT 355 LP P+ GD+FFDFEGDPLW+ G WGLEYLFG++E G F WAHDR Sbjct 310 LPSPSDGDIFFDFEGDPLWSERGSHDWGLEYLFGLVEIDGVNLVGGEKPRFVTFWAHDRA 369 Query 356 AERQALTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLV 415 E+QAL DF+A + RRR+ P++H+YHYAPYEKTALLRL R+G+ EDD+D LR+GV V Sbjct 370 QEKQALIDFVAYLHERRRQWPDLHVYHYAPYEKTALLRLAARHGVCEDDIDQFLRDGVFV 429 Query 416 DLYPLVRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDE 475 DLY +VR IRV S+S+K LEPLY+G R+ V DSI +Y R+ R I++ Sbjct 430 DLYAVVRAGIRVSQRSYSIKKLEPLYMGD--RTAAVAKGDDSIVAYHRFVLAR---EIED 484 Query 476 AATVLKEIE---GYNHYDCRSTRALRDWLLMRAWEA-GV-TPIGAQPVPDA--DPIDDGD 528 AT +EI+ YN DC ST LR+WLL R E GV P GA P A + G+ Sbjct 485 RATAEREIQDIANYNEEDCVSTLLLRNWLLARQVEVDGVGGPNGATVAPLAGDGSLPGGE 544 Query 529 SLASVLSK-------------FTGDAAA-GERTPEQTAVALLAAARGYHRREDKPFWWAH 574 + A V S T D +RTPEQ +A++AA +H REDKPFWW H Sbjct 545 AAAQVPSDSRVALLELERLLRATIDGVKPQDRTPEQQTIAMVAATLLFHAREDKPFWWKH 604 Query 575 FDRLNYPVDEWSDSTDVFLASEASVTVDWHMPPRARKPQRRVRLTGELARGDL---NGNV 631 FDRL PV EW VFL ++ V DWH ++P+R + + GE G L V Sbjct 605 FDRLRLPVTEWMSDPGVFLIEDSEVVEDWHRDTPRQRPRRTIAVKGEPMGGTLLKPGAEV 664 Query 632 FALYEPPAPPGMTDNP---DRRAAGPAAVVETDDPTVPT----EVVIVER-TGSDGNTFQ 683 A+Y P P G+ P + R++ V+ETDD P +V+ +E DG+ Sbjct 665 AAVYASPPPLGVELLPGHLNARSSASVKVLETDDVIAPNGHVHQVLTLEELMPKDGDEHS 724 Query 684 QLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPSTALMDVLLRRPPRTRSGAALPRS 743 P AL P V TT + ++E A V S P+LP+ A +DVLLRR PR SG +LP Sbjct 725 DAPAALVPSGIVRTTNIDAALERLARRVQSSLPELPAAAGVDVLLRRSPRLHSGGSLPVV 784 Query 744 SDP----VTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVIAELVTEHAWRIGVVAQSHA 799 + V I AA LDLD S L+V GPPGTGKTY A++VIA+LV +H WR+GV AQSHA Sbjct 785 GEGDDRYVRAIEAALLDLDRSALSVQGPPGTGKTYVASQVIADLVRDHGWRVGVCAQSHA 844 Query 800 TVENLLEGVISAGLDPGQVAKKPHDHTAGRWQSIDGSQYTEFI--RDTAGCVIGGTAWDF 857 ++EN+L V++AG+DP QVAK + T W + + G VIGGTAWD Sbjct 845 SIENVLAAVVAAGVDPEQVAKMTKEATEPTWTDLASADDLAGFAAEQQGGYVIGGTAWDL 904 Query 858 ANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDPQQLPQVSQGTHPEPVDT 917 N RV LDLLVIDEAGQ+ LA T+AVA +A LLLLGDPQQLPQVSQGTHPEPVD Sbjct 905 TNPKRVQPGQLDLLVIDEAGQYSLAKTLAVAESADRLLLLGDPQQLPQVSQGTHPEPVDA 964 Query 918 SALSWLV----DGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGRLCSHTERTAVRRL 973 SAL W++ D + LP GYFL+ ++RMHPA+ VS L+YEGRL SH +RTA R L Sbjct 965 SALGWVIRAERDDERVLPASHGYFLETTWRMHPALTEPVSRLAYEGRLRSHEDRTAKRLL 1024 Query 974 DGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWT---DEHGTRPLAASDVLVL 1030 +G PG+H R V H+ + SPEEA+ ++ +R +G W DE G RPL DVLV+ Sbjct 1025 EGVEPGLHVRLVDHRDRAQWSPEEADVVVDLVRDHVGRTWQLAPDEPG-RPLTQDDVLVI 1083 Query 1031 APYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSADDVPRGISFL 1090 PYNAQV +R L +AG + VGTVDKFQG +APV +SM AS+ DVPRGI FL Sbjct 1084 TPYNAQVGTLRAALDAAGFL---DISVGTVDKFQGREAPVAIVSMAASAHADVPRGIGFL 1140 Query 1091 LNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGL 1135 L+R+RLNVAVSRAQ+AA +VRS +LT + P TPD L LGAFLGL Sbjct 1141 LDRHRLNVAVSRAQHAAYLVRSTVLTDFAPRTPDELTALGAFLGL 1185 >gi|116669455|ref|YP_830388.1| hypothetical protein Arth_0890 [Arthrobacter sp. FB24] gi|116609564|gb|ABK02288.1| conserved hypothetical protein [Arthrobacter sp. FB24] Length=1215 Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust. Identities = 559/1215 (47%), Positives = 700/1215 (58%), Gaps = 100/1215 (8%) Query 8 IVYSASDLAAAARCQYALLREFDAKLGRGPAVAVD-DELMARAAVLGSAHEGRRLDQLRH 66 +VYSASDL AA C+Y LLR+ D KLGR P + DE++AR A LG HE + LD Sbjct 15 LVYSASDLVIAATCEYQLLRKLDEKLGRSPKAEFEPDEMLARTAKLGDVHEHKVLDNFLD 74 Query 67 EFGDAVAIIGRPAYTPAGLAAAADATRRA--------IANHAPVVYQAAMFDGRFVGFAD 118 EFG GR Y A A AT +A + A VV+QAA FDG F G +D Sbjct 75 EFGPWDPATGRGVYDVAAATAMDRATLQAKHAESIDALRAGADVVFQAAFFDGLFHGRSD 134 Query 119 FLIR-DGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELG-------- 169 FL++ D RY V DTKLAR VTALLQLAAY D L+H+G+ A L LG Sbjct 135 FLVKQDDGRYAVYDTKLARHAKVTALLQLAAYGDQLLHAGIEPAPAVTLVLGATEETAGG 194 Query 170 --DGTIVRYRVGELIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLR 227 D +++ +++PV+R +R L GH V W V AC RC C E+++ Sbjct 195 GFDYVRSSHKLADILPVFRERRDRFLALTAGHRNQPDTVGWGTPGVVACGRCDYCQEQVK 254 Query 228 ASDDLLLVGGMRVRQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQ----- 282 A+DDLLLV M QR KL E GI T+ +LAD T +PG + + L ++ QA++Q Sbjct 255 ATDDLLLVARMNSAQRKKLHEQGIFTVKQLADAT--LPGASPSLL-RMQDQARMQSNAGT 311 Query 283 -------IRQRDTGAPQFEIVDPRPLTLLPEPNPGDLFFDFEGDPLW--TADGKQWGLEY 333 ++ + + + ++ L LP P+PGD+FFDFEGDPLW +A G WGLEY Sbjct 312 AEGSVSYVKDGEQHSISYRVIPEHTLAELPPPSPGDIFFDFEGDPLWQDSATGI-WGLEY 370 Query 334 LFGVLEA----GRAGVFRPLWAHDRTAERQALTDFLAIVARRRRRHPNMHIYHYAPYEKT 389 LFGV+EA GR VF+P WAH+R AE+QA DFL V RRRR+P+MH+YHYA YEKT Sbjct 371 LFGVIEAPTEPGRRTVFKPFWAHNRAAEKQAFLDFLDYVENRRRRYPDMHVYHYAAYEKT 430 Query 390 ALLRLVGRYGIGEDDVDDLLRNGVLVDLYPLVRKSIRVGTDSFSLKALEPLYLGTQPRSG 449 AL +L + GED VD LR+G+LVDLY VR SIR+ +S+S+K LEPLY+G+ RSG Sbjct 431 ALRKLSVMHVAGEDTVDTWLRDGLLVDLYQTVRNSIRISENSYSIKKLEPLYMGSNLRSG 490 Query 450 DVTTAADSINSYARYCELRAAGRIDEAATVLKEIEGYNHYDCRSTRALRDWLLMRAWEAG 509 DV A S+ +YA YCE R AG D+AA +L I YN YDC ST LRDWLL A E G Sbjct 491 DVKDAGASVVAYADYCEARDAGLADDAAAILAGISDYNEYDCLSTLELRDWLLRLAAERG 550 Query 510 VTPIGAQP------------VPDADPIDDGDSL--ASVLSKFTGDAAAGERT-------P 548 IGA P PD+ DG +L + + + D AA RT P Sbjct 551 ---IGAAPEAQGPGGNLGRAAPDS---SDGAALRRSELAIRAFLDRAAEFRTSGKEFGSP 604 Query 549 EQ--TAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVTVDWHMP 606 E AVA++ AA YHRRE K FWWAHFDR D +VFL EA + DWH Sbjct 605 EADVQAVAMVEAAVSYHRRERKAFWWAHFDRCESGPDTHQQDRNVFLVEEARILDDWHRV 664 Query 607 PRARKPQRRVRLTGELARG-DL--NGNVFALYEPPAPPGM----TDNPDRRAAGPAAVVE 659 R P+RRV+LTG ++ G DL F +Y+ P P G+ +D R V+E Sbjct 665 G-TRLPERRVQLTGTVSAGSDLREGSKWFRMYDRPLPAGLEGTGSDGSGRNGWFGTEVLE 723 Query 660 TDDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVAS------ 713 VVI +R +P AL PV T +L E++ A VA+ Sbjct 724 LGHEDGRDTVVIRDRLHRKIEPHNSMPIALTEDQPVATKSLEEALAMLADQVAAGLPDAS 783 Query 714 ----GSPQLPSTALMDVLLRRPPRTRSGAALPR---SSDPVTD-IAAAALDLDSSYLAVH 765 G P +D++ R PPR + LP +D D I AA LD SYLAV Sbjct 784 AEPPGEPVFRKHPALDLVRRVPPRLVTSGPLPEPAGGADRFIDAITAAVAALDHSYLAVQ 843 Query 766 GPPGTGKTYTAARVIAELVTEHAWRIGVVAQSHATVENLL-EGVISAGLDPGQVAKKPHD 824 GPPGTGKT+ + VIA LV W++GVVAQSHA VENLL V AG+DP +VAK Sbjct 844 GPPGTGKTHVGSHVIARLVAR-GWKVGVVAQSHAVVENLLCTAVEKAGVDPRRVAKDVKH 902 Query 825 HTAGRWQSIDGSQYTEFIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANT 884 + W + + G ++GGTAW G+ VP SLDLLVIDEAGQF LANT Sbjct 903 DGSLPWDHRAAADVDRLLSSPGGALVGGTAWTM-TGSTVPAGSLDLLVIDEAGQFSLANT 961 Query 885 IAVAPAATNLLLLGDPQQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRM 944 +AVA A+ LLLLGDPQQLPQVSQGTHPEPV+ SAL W+ G TLP E GYFL ++RM Sbjct 962 LAVAQASPRLLLLGDPQQLPQVSQGTHPEPVNESALGWISAGHATLPPELGYFLADTWRM 1021 Query 945 HPAVCAAVSALSYEGRLCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAE 1004 +CAAVS LSYEGRL S + +R L G P G+ T V H GN SPEEA ++ + Sbjct 1022 ASPLCAAVSELSYEGRLQSASA-ADLRFLAGVPAGIETVLVAHSGNITSSPEEAAEVVHQ 1080 Query 1005 LRQLLGSPWTDEHGTRPLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQ 1064 + + L W DE G RPL D+LV+A YNAQV L+R L +A G VRVGTVDKFQ Sbjct 1081 VGRHLSLTWHDETGDRPLGPEDILVVAAYNAQVNLIRDVLDAA---GHLAVRVGTVDKFQ 1137 Query 1065 GGQAPVVFISMTASSADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPD 1124 G +A VV +SM S+ + PRG+ FLL+RNR+NVAVSR ++ AV+VR+ LT YLPA P+ Sbjct 1138 GQEAAVVIVSMACSAVAEAPRGMEFLLSRNRINVAVSRGKWRAVVVRAPELTNYLPAHPE 1197 Query 1125 GLVDLGAFLGLTSTS 1139 GL LG F+GL S Sbjct 1198 GLEQLGGFIGLCQRS 1212 >gi|323358756|ref|YP_004225152.1| superfamily I DNA and RNA helicase and helicase subunits [Microbacterium testaceum StLB037] gi|323275127|dbj|BAJ75272.1| superfamily I DNA and RNA helicase and helicase subunits [Microbacterium testaceum StLB037] Length=1180 Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust. Identities = 557/1192 (47%), Positives = 711/1192 (60%), Gaps = 82/1192 (6%) Query 8 IVYSASDLAAAARCQYALLREFDAKLGRGPAVA-VDDELMARAAVLGSAHEGRRLDQLRH 66 IV+SASDL AAA C++A LR DAK+GR AV +D + RAA LG+AHE R LD+ R Sbjct 10 IVWSASDLKAAAECEFAWLRAIDAKIGRIAAVDDPEDATLERAARLGTAHELRVLDEYRE 69 Query 67 EFGDAVAIIGRPAYTPAGLAAAADATR---RAIAN-HAPVVYQAAMFDGRFVGFADFLIR 122 FG AV I PA + A A+A R A+A+ A VVYQAA FVGFADFL+R Sbjct 70 RFGAAVREI--PAARSSDAEALAEAVRLTDEALADPGAEVVYQAAFATDEFVGFADFLVR 127 Query 123 ------DGHR-YRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVR 175 DG R + V DTKLAR VTAL+QLAAY D L GV + D EL LGDGT Sbjct 128 EREARVDGTRPWIVQDTKLARRARVTALMQLAAYVDQLDRLGVARSGDVELLLGDGTTST 187 Query 176 YRVGELIPVYRSQRALLQRLLDGHYT----AGTAVRWDDER----VQACFRCPQCTERLR 227 +RV +L+PV+ +R L+ L+ AG + W D R V AC RC C + Sbjct 188 HRVDDLLPVFGLRRTRLRSLIADRRVELGVAGPVIAWGDVRGDLDVVACGRCATCEIEVI 247 Query 228 ASDDLLLVGGMRVRQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRD 287 A DLLLV GMR QRD+L GI TI +LA + L+ + L QA+LQ+ D Sbjct 248 AHRDLLLVAGMRPVQRDRLRAGGILTIDDLARASEAPASLSADTFASLRTQARLQL---D 304 Query 288 TGA------------PQFEIVDPRPLTLLPEPNPGDLFFDFEGDPLWTAD-GKQWGLEYL 334 + A P FE+V P+ L +LP P+ GDLFFDFEGDPL+T G+ WG++YL Sbjct 305 SPAGVPSDDAPAHAVPTFEVVAPKSLGVLPRPDHGDLFFDFEGDPLYTEGVGEHWGIDYL 364 Query 335 FGVLEAGRAGVFRPLWAHDRTAERQALTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRL 394 FG ++ + +WAH ER AL FL +VA RR+++P MHIYHYAPYE T LL + Sbjct 365 FGWVDTRE--TYGAIWAHTFAEERAALERFLDMVALRRQQYPGMHIYHYAPYEPTHLLTM 422 Query 395 VGRYGIGEDDVDDLLRNGVLVDLYPLVRKSIRVGTDSFSLKALEPLYLGTQPRSGDVTTA 454 RYG+ E DVD LLR+GV VDLYP+VR+++RVG+ S+S+K LEPLY+G + R+ DV Sbjct 423 AARYGVREADVDRLLRDGVFVDLYPVVRRALRVGSRSYSIKKLEPLYMGDEVRTSDVQRG 482 Query 455 ADSINSYARYCELRAAGRIDEAATVLKEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPI- 513 DSI Y L G + A VL ++ YN YDC STR LRDWL+ RA E+G P Sbjct 483 DDSIVKYVEARALSVDGDTEAAQRVLDDLADYNRYDCVSTRRLRDWLVDRARESGAVPAR 542 Query 514 GAQPVPDADPIDDGDSLASVLSKFTGDAAAGERTPEQTAVALLAAARGYHRREDKPFWWA 573 GA+P A + A+ L ++ DA P+ TA+ L AAA Y+ RE+K +W Sbjct 543 GAEPDEQA---YEPSPRATALQRWAADAP----EPDATALRLAAAAIDYYPREEKTYWAT 595 Query 574 HFDRLNYPVDEWSDSTDVFLASEA--SVTVDWHMPPRARKPQRR-VRLTGELARGDL--- 627 HF RL PV W + DV + A V DWH+ R +RR V L GE A G Sbjct 596 HFLRLREPVSVWEQTRDVVVVDTARSRVVTDWHIAESGRGSERRLVELRGEPAPGTRLTP 655 Query 628 NGNVFALYEPPAPPGMTDNPDRRAAGPAAVVETDDPTVPTEVVIVERTGSDGNTFQQLPF 687 + FA+Y+ PAP + P R G V + V + IVE +DG T+ LP Sbjct 656 DAEPFAVYDLPAPFPLDTRP-RWIHGARRVTVRE---VLDDGAIVEEIAADGVTWDDLPL 711 Query 688 ALAPGPPVPTTALRESIESTAAAVASGSPQLPSTALMDVLLRRPPRTRSGAALPRSS--- 744 AL P P +++I++ A AV + +P +PS D+L R PPRTRSGA P ++ Sbjct 712 ALTPPAPPRAGNQQKAIDAWADAVLASAPSIPSGPAADILRRVPPRTRSGALAPVTAIDG 771 Query 745 ----DPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVIAELVTEHAWRIGVVAQSHAT 800 D V I+ + DL+ SYLAV GPPGTGKTY + VIA LV E +RIGVVAQSHAT Sbjct 772 RPGDDEVAAISRSVADLEHSYLAVQGPPGTGKTYVGSHVIARLVAERGYRIGVVAQSHAT 831 Query 801 VENLLEGVISAGLDPGQVAKKPHDHTAGR-WQSIDGSQYTEFIRDTA--GCVIGGTAWDF 857 +E++L+ VI+AG+ +V K P D A + + + F + A G V+GGTAWDF Sbjct 832 IEHMLDQVIAAGVPASRVGKAPKDPNAPHAFTVLPKNGVAAFTAENAAHGFVVGGTAWDF 891 Query 858 ANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDPQQLPQVSQGTHPEPVDT 917 ++ R+P+ SLDLLVIDEAGQF LA+TIAV+ +A LLLLGDPQQLPQVSQGTHPEPVDT Sbjct 892 SHETRIPRGSLDLLVIDEAGQFSLASTIAVSLSAQRLLLLGDPQQLPQVSQGTHPEPVDT 951 Query 918 SALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGRLCSHTERTAVRRLDGYP 977 SAL W++DG +P E GYFL R+ RMHPAV VS LSYEGRL +H TA+RRL+G Sbjct 952 SALGWIIDGAEVVPPELGYFLARTRRMHPAVAGPVSRLSYEGRLAAHPS-TALRRLEGID 1010 Query 978 PGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWTDEHG----------TRPLAASDV 1027 PGVH V H+GNS S EEA + +R L+G W G RPL A D+ Sbjct 1011 PGVHVVPVRHRGNSTCSGEEAAEVARLVRDLIGREWAGAEGGAGDSATALEPRPLRADDI 1070 Query 1028 LVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTASSADDVPRGI 1087 +V+ PYNAQ V L++AG V VGTVD+FQG +A V +++ ASS + PRG+ Sbjct 1071 IVITPYNAQQVAVEEALSAAGF---PEVPVGTVDRFQGKEAVVAILTLAASSGREAPRGL 1127 Query 1088 SFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLTSTS 1139 FLL RNR+NVA+SRA AA +V S L LP TP+G+ L AF L + + Sbjct 1128 EFLLLRNRINVAISRAMQAAYVVYSMSLLDDLPRTPEGVARLSAFARLVAEA 1179 >gi|220911774|ref|YP_002487083.1| hypothetical protein Achl_1000 [Arthrobacter chlorophenolicus A6] gi|219858652|gb|ACL38994.1| conserved hypothetical protein [Arthrobacter chlorophenolicus A6] Length=1215 Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust. Identities = 539/1212 (45%), Positives = 681/1212 (57%), Gaps = 102/1212 (8%) Query 8 IVYSASDLAAAARCQYALLREFDAKLGRGPAVAVD-DELMARAAVLGSAHEGRRLDQLRH 66 +V+SASDL AA+ C+Y LR D KLGR A DE+ RA LG HE L+ L Sbjct 18 LVFSASDLVAASECEYRTLRVLDEKLGRAAKAAFPPDEMRVRAGELGDRHEQTVLESLVA 77 Query 67 EFGDAVAIIGRPAYT-------PAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADF 119 ++G A G Y+ L A T A+ + A VV+QA FDG F+G+ADF Sbjct 78 KYGPWDASRGTGVYSLERGNTVRGELQAKHAETELALRSGADVVFQATFFDGEFLGYADF 137 Query 120 LIRDGH------RYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELG---- 169 L+ + RY V DTKLAR V ALLQLAAY D L+ G+ + L LG Sbjct 138 LVNEAAGTGLPGRYEVWDTKLARHAKVGALLQLAAYGDQLLGMGLDPSPAVTLVLGTRVG 197 Query 170 -DGTIVRYRVGELIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRA 228 D + + +L+PV+R +R ++L H G AV+W + C RC C E+++ Sbjct 198 EDWLRSSHSLPDLLPVFRERRLRFRQLTADHRVRGEAVKWQQPGIVHCGRCDYCAEQVQL 257 Query 229 SDDLLLVGGMRVRQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQI----- 283 DLL+V GM V QR KL AGIT+I ELA A N++ +L AQA++Q+ Sbjct 258 HRDLLMVAGMSVVQRRKLHAAGITSIDELAAMPA---ADAKNSVARLRAQARMQLGLDAA 314 Query 284 -------RQRDTGAPQFEIVDPRPLTLLPEPNPGDLFFDFEGDPLWTADGKQ-WGLEYLF 335 + + + ++ + LP P+ GD+FFDFEGDPLW WG+EYLF Sbjct 315 AGSRTFTKDGEPHTVSYSVLPEHTIGTLPAPSAGDIFFDFEGDPLWQDPATGVWGIEYLF 374 Query 336 GVLEAGRAG-----VFRPLWAHDRTAERQALTDFLAIVARRRRRHPNMHIYHYAPYEKTA 390 GV+EA AG VFRP WAH R+ ER+A DFL V RRR++P+MH+YHYA YEKTA Sbjct 375 GVIEAPVAGAGGDPVFRPFWAHSRSGERKAFLDFLEYVENRRRQYPDMHVYHYAAYEKTA 434 Query 391 LLRLVGRYGIGEDDVDDLLRNGVLVDLYPLVRKSIRVGTDSFSLKALEPLYLGTQPRSGD 450 L L + GED VDD LR G+LVDLY V+ S+R+ S+S+K LEPLY+G RSGD Sbjct 435 LRNLSLAHQAGEDTVDDWLRKGLLVDLYATVKHSLRISEASYSIKKLEPLYMGDNLRSGD 494 Query 451 VTTAADSINSYARYCELRAAGRIDEAATVLKEIEGYNHYDCRSTRALRDWLL--MRAWEA 508 V A S+ +YA YC R AG EAA VL I YN YDC ST LRDWLL +A Sbjct 495 VKDAGASVVAYAAYCAARDAGHQAEAAAVLSSISDYNQYDCLSTLRLRDWLLDIQPQADA 554 Query 509 GVTPIGAQPVPD-------------ADPIDDGDSLASVLSKFTGDAAAGERTPEQTAVAL 555 P+ A+ P+ D D+ + G T ++ A+A+ Sbjct 555 EKVPVEAREDPEPGVFALGTARPGRGDAQDESPEEGRLHEYLAGLPDNRPWTDDERAIAM 614 Query 556 LAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVTVDWHM-PPRARKPQR 614 +AAA GYHRRE K FWW HFDR+ P+ WSD +VF+ A V+ DW + PR R R Sbjct 615 VAAATGYHRRERKQFWWQHFDRVEAPLASWSDQRNVFVVESAEVSSDWALAKPRERMRTR 674 Query 615 RVRLTGELARGD---LNGNVFALYEPPAPPGMTDNPDRRAAGPAA-----------VVET 660 ++L G + G + LY+ P P GM PD A P A + Sbjct 675 ILKLRGIMTEGSDFRADSTWCRLYDSPPPDGMA-APD---AAPGARGFSFGTRISDLQPA 730 Query 661 DDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPS 720 D T + I ER + LP AL P+ T ++ ++ A AV S P LP+ Sbjct 731 PDNPAYTLITIAERESGKVQAYPHLPVALTEDQPLATASIEAALAELARAVGSTVPSLPA 790 Query 721 TALMDVLLRRPPRTRSGAALPRSSD----------PVTDIAAAALDLDSSYLAVHGPPGT 770 +D+L + PPR RS LP ++ I A+ DLD SYLAV GPPGT Sbjct 791 QPGLDILRKLPPRFRS---LPGPAEVQHGADGAADYAGAITASLRDLDRSYLAVQGPPGT 847 Query 771 GKTYTAARVIAELVTEHAWRIGVVAQSHATVENLL-EGVISAGLDPGQVAKK---PHDHT 826 GKTY A VI +LV E W++GVVAQSH VENLL + G+DP VAKK PH+ Sbjct 848 GKTYVGAHVIGQLVGE-GWKVGVVAQSHNVVENLLCRAIDKGGVDPSLVAKKLSAPHEVP 906 Query 827 AGRWQSIDGSQYTEFIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIA 886 W++ + + GC++GGTAW G VP SLDLLVIDEAGQF LANT+A Sbjct 907 ---WKATADGDVARLLESSGGCLVGGTAWTM-TGKEVPAGSLDLLVIDEAGQFSLANTLA 962 Query 887 VAPAATNLLLLGDPQQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHP 946 V+ AA LLLLGDPQQLPQV+QG HPEPVD SAL WL G TLP GYFL S+RMHP Sbjct 963 VSRAAKRLLLLGDPQQLPQVTQGAHPEPVDDSALGWLAAGHATLPARLGYFLADSWRMHP 1022 Query 947 AVCAAVSALSYEGRLCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELR 1006 A+CAAVS LSYE +L S ++R L+ PPGV T V H GNS S EEA ++ + Sbjct 1023 ALCAAVSRLSYESKLQS-APAASLRELETVPPGVETVLVQHTGNSTSSAEEASEVVRQAH 1081 Query 1007 QLLGSPWT--DEHGTRPLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQ 1064 + LG WT E RPL D+LV+A YN QV L+R+ LA AGL VRVGTVDKFQ Sbjct 1082 RHLGLKWTPGPEAAARPLEQQDLLVVAAYNTQVHLIRKELADAGL---PDVRVGTVDKFQ 1138 Query 1065 GGQAPVVFISMTASSADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPD 1124 G +APVV +SM S+ + PRG FLLNRNR+NVAVSR Q+ AVIVRS LT Y+P P Sbjct 1139 GQEAPVVLVSMACSAVAEAPRGAEFLLNRNRINVAVSRGQWRAVIVRSPELTNYMPHKPA 1198 Query 1125 GLVDLGAFLGLT 1136 L +LGAF+GL+ Sbjct 1199 ALEELGAFIGLS 1210 >gi|325962340|ref|YP_004240246.1| nuclease (RecB family) [Arthrobacter phenanthrenivorans Sphe3] gi|323468427|gb|ADX72112.1| putative nuclease (RecB family) [Arthrobacter phenanthrenivorans Sphe3] Length=1209 Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust. Identities = 549/1204 (46%), Positives = 682/1204 (57%), Gaps = 87/1204 (7%) Query 8 IVYSASDLAAAARCQYALLREFDAKLGRGPAVAVD-DELMARAAVLGSAHEGRRLDQLRH 66 +V+SASDL AA+ C+Y LR D KLGR P DE+ RA LG HE L L Sbjct 15 LVFSASDLVAASECEYRTLRILDEKLGRSPKAEFPADEMQVRAGELGDHHEQTVLASLIR 74 Query 67 EFGDAVAIIGRPAYT-------PAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADF 119 ++G+ A G Y+ L A T A+ + A VV+QA FDG F+G+ADF Sbjct 75 KYGEWDAGRGGGVYSLERGQNLRGDLQAKHAETELALRSGADVVFQATFFDGEFLGYADF 134 Query 120 LIRDGH------RYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELG---- 169 L+ + RY V DTKLAR V ALLQLAAY D L+ G+ + L LG Sbjct 135 LVNEAAGTGEPGRYEVWDTKLARHAKVGALLQLAAYGDQLLGMGLEPSPVVTLVLGTRVG 194 Query 170 -DGTIVRYRVGELIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRA 228 D + + +L+PV+R +R ++L H AV+W C RC C E+++ Sbjct 195 EDWLRSSHSLPDLLPVFRERRRRFRQLTAQHRETDGAVQWQQPGTVHCGRCDYCAEQVQL 254 Query 229 SDDLLLVGGMRVRQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQR-- 286 DLL+V GM V QR KL AGITTI ELA A N++ +L AQA++Q+ Sbjct 255 HRDLLMVAGMSVVQRKKLQAAGITTIEELAAMPAED---ARNSVVRLRAQARMQLGLEAP 311 Query 287 -------DTGAPQ---FEIVDPRPLTLLPEPNPGDLFFDFEGDPLWT--ADGKQWGLEYL 334 G P F ++ + LLP P+PGD+FFDFEGDPLW A G WG+EYL Sbjct 312 SGSRTFTKDGKPHTVSFTVLPGNTIGLLPPPSPGDIFFDFEGDPLWQDPATGA-WGIEYL 370 Query 335 FGVLEA---GRAG--VFRPLWAHDRTAERQALTDFLAIVARRRRRHPNMHIYHYAPYEKT 389 FGV+EA G AG VFRP WAH RT ER+A DFL V RR R P+MH+YHYA YEKT Sbjct 371 FGVVEAPVPGAAGEPVFRPFWAHSRTQERRAFLDFLEYVEERRSRFPDMHVYHYAAYEKT 430 Query 390 ALLRLVGRYGIGEDDVDDLLRNGVLVDLYPLVRKSIRVGTDSFSLKALEPLYLGTQPRSG 449 AL L + GE+ VD LR G+LVDLY VR S+R+ S+S+K LEPLY+G RSG Sbjct 431 ALRNLSLAHQAGEETVDSWLRQGLLVDLYATVRHSLRISEASYSIKKLEPLYMGNNLRSG 490 Query 450 DVTTAADSINSYARYCELRAAGRIDEAATVLKEIEGYNHYDCRSTRALRDWLLMRAWEAG 509 DV A S+ +YA YC R AG EA +L I YN YDC ST LRDWLL A +AG Sbjct 491 DVKDAGASVVAYAAYCAARDAGNAAEADRILASISDYNQYDCLSTLRLRDWLLAVAPQAG 550 Query 510 VTPIGAQPVPDADPIDDGDSLASVLSKFTGDAAAGER--------------TPEQTAVAL 555 VT A P +L S T + A R T ++ A+A+ Sbjct 551 VTATPAAPSALPAAEPSPAALPSESPSATEETPAETRLREYLAGIPDSRPWTNDERAIAM 610 Query 556 LAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVTVDWHM-PPRARKPQR 614 +AAA GYHRRE K FWW HFDR+ P++ W+D +VF+ S A VT DW + PR R R Sbjct 611 VAAATGYHRRERKQFWWQHFDRVEAPIENWADQRNVFVVSSAEVTSDWALAKPRERMRTR 670 Query 615 RVRLTGELARGD---LNGNVFALYEPPAPPGMTDNPDRRAAGP---------AAVVETDD 662 +RL G +A G + + LY+ APP A G + + D Sbjct 671 VLRLRGTMAEGSDFRPDSSWCRLYD--APPPDGMAAADAAPGARAYSFGTRISELAPAPD 728 Query 663 PTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPSTA 722 T + I ER + LP AL P+ T ++ ++ A V S P LP+ Sbjct 729 NPEHTIITIAERESGKVAAYPHLPVALTEDQPLATASIEAALADIAQVVGSTLPSLPAHP 788 Query 723 LMDVLLRRPPRTRSGA-------ALPRSSDPVTDIAAAALDLDSSYLAVHGPPGTGKTYT 775 +D+L ++PPR R+ A A S D + I A+ DLD SYLAV GPPGTGKT+ Sbjct 789 GLDILRKQPPRFRTLAGPVDVRQADEGSVDYASAITASLRDLDHSYLAVQGPPGTGKTHV 848 Query 776 AARVIAELVTEHAWRIGVVAQSHATVENLLEGVISA-GLDPGQVAKKPHDHTAGRWQSID 834 A VI LV E W+IGVV QSH VENLL I+A G+ P VAKK + W Sbjct 849 GAHVIGRLVAE-GWKIGVVGQSHNVVENLLCCAIAAGGVPPTVVAKKLNAPHEVPWALQA 907 Query 835 GSQYTEFIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNL 894 + + GC++GGTAW G VP SLDLLVIDEAGQF LANT+AV+ AA L Sbjct 908 EGDVAQLLASPGGCLVGGTAWTM-TGKEVPAGSLDLLVIDEAGQFSLANTLAVSRAAKRL 966 Query 895 LLLGDPQQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSA 954 LLLGDPQQLPQV+QG HPEPVD SAL WL G TLP GYFL S+RMHP +C AVS Sbjct 967 LLLGDPQQLPQVTQGAHPEPVDDSALGWLAAGHATLPASLGYFLADSWRMHPDLCRAVSR 1026 Query 955 LSYEGRLCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWT 1014 LSYEG+L S ++R+L+G PPGV T V H GN+ S EEA ++ ++R+ LG WT Sbjct 1027 LSYEGKLQS-APAASLRKLEGLPPGVETVLVEHTGNATASAEEAAEVVRQVRRHLGLKWT 1085 Query 1015 D--EHGTRPLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVF 1072 E RPL DVLV+A YNAQV LVR+ L AGL VRVGTVDKFQG +APVV Sbjct 1086 PGAESEVRPLDQEDVLVVAAYNAQVHLVRKALEEAGLA---KVRVGTVDKFQGQEAPVVI 1142 Query 1073 ISMTASSADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAF 1132 +SM S+ + PRG FLLNRNR+NVAVSR Q+ AVI+RS LT Y+P P L +LGAF Sbjct 1143 VSMACSAVAEAPRGAEFLLNRNRINVAVSRGQWRAVIIRSPELTSYMPHKPAALEELGAF 1202 Query 1133 LGLT 1136 LGL+ Sbjct 1203 LGLS 1206 >gi|50955194|ref|YP_062482.1| hypothetical protein Lxx15790 [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951676|gb|AAT89377.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str. CTCB07] Length=1041 Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust. Identities = 497/1040 (48%), Positives = 626/1040 (61%), Gaps = 40/1040 (3%) Query 127 YRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYRVGELIPVYR 186 YRV D+KLARS VTALLQLAAYAD L +GV V EL LGDG++ +R+ ++ PVYR Sbjct 4 YRVQDSKLARSARVTALLQLAAYADQLRRAGVAVDETVELLLGDGSVSEHRLSDIEPVYR 63 Query 187 SQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGGMRVRQRDKL 246 +R L ++ H +V W D R C RC C ++A+ D+LLV GMR+ R++L Sbjct 64 KRRTRLLSIVREHIADEGSVAWGDPRFAVCGRCATCDAEIQATRDVLLVAGMRIAHRERL 123 Query 247 LEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDTGAPQFEIVDPRPLTLLPE 306 + AG+ TI LA PV G+ L L QA+LQ+ P + + L +LP Sbjct 124 IAAGLPTIDALAAAEGPVDGIPEGTLSGLREQARLQLNAEPGEPPPIRVFNAPVLAVLPH 183 Query 307 PNPGDLFFDFEGDPLWT-ADGKQWGLEYLFGVLEAGRAGVFRPLWAHDRTAERQALTDFL 365 P+ GDLFFDFEGDPL+T G++WGL+YLFG ++A F WAHD A R AL +FL Sbjct 184 PDEGDLFFDFEGDPLYTEGPGERWGLDYLFGTVDA--EARFTAFWAHDFAAGRAALEEFL 241 Query 366 AIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPLVRKSI 425 A V RR+R P +HIYHYA YE+T LL + R+G+GE++VD LLR GVLVDLYPLVRK++ Sbjct 242 AYVRERRKRCPGLHIYHYAAYEQTHLLSIAARHGVGEEEVDALLREGVLVDLYPLVRKAV 301 Query 426 RVGTDSFSLKALEPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVLKEIEG 485 RVG+ S+S+K LEPLY+G + R +VTT ADSI YA +L A GR EA ++L + Sbjct 302 RVGSRSYSIKKLEPLYMGGELRESEVTTGADSIAEYANARDLLALGRTAEAQSLLDALAD 361 Query 486 YNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTGDAAAGE 545 YN YDC ST LRDWL+ RA E GV PIGA P+ + +P D L + L F GD Sbjct 362 YNRYDCLSTLRLRDWLIERARENGV-PIGAAPMEEPEPAPDESPLRAGLLAFAGDPLDPH 420 Query 546 RTPEQTAVALLAAARGYHRREDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVTVDWHM 605 R+ ++ A+AL AAA +HRRE K FW AHF RL P+DEW+D+ D+ + ASV DW+ Sbjct 421 RSADREAMALAAAAIDFHRRERKSFWQAHFARLIQPIDEWADTRDLLVMETASVLRDWYA 480 Query 606 PPRARKPQRRVRLTGELARGDL-----NGNVFALYEPPAPPGMTD-NPDRRAAGPAAVVE 659 R +R + L+G+ G LYE P P P R AV+E Sbjct 481 DEGQRVERRDLLLSGQWGAGSAVRVSERAGPALLYEYPGPFRQPRAQPGARTVRTVAVIE 540 Query 660 TDDPTVPTEVVIVERTGSDGNTFQQLPFALAPGPPVPTTALRESIES--TAAAVASGSPQ 717 D VV+ E + + LP ALAP PP L E++ T +A Sbjct 541 ARD---DGSVVVRETLPAGVPPYAALPSALAPAPPPDARRLAEAVREWGTQLLIARNHRT 597 Query 718 LPSTALMDVLLRRPPRTRSGAALPRSSDP--------VTDIAAAALDLDSSYLAVHGPPG 769 P A +D+L R PPRTRSG P + V + A+ LDLD SYLAV GPPG Sbjct 598 WPVQAAVDLLRRTPPRTRSGGLAPEAGGDARGEGDRRVEAVVASLLDLDRSYLAVQGPPG 657 Query 770 TGKTYTAARVIAELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGR 829 TGK+ ARVI LV E WRIGVVAQSH VENLL+ V++ GLD G V K P G Sbjct 658 TGKSSLGARVIGRLVAERGWRIGVVAQSHTVVENLLDRVVATGLDAGLVGKTPSASARGV 717 Query 830 WQS--------IDGSQYTEFIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCL 881 DG R +G V+GGTAWDFAN RVP+ SLDLLV+D AGQF L Sbjct 718 ASRAPAFTVLPADGQLAFAEERAASGYVLGGTAWDFANAARVPRGSLDLLVVDGAGQFSL 777 Query 882 ANTIAVAPAATNLLLLGDPQQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRS 941 A+TIAV AA NLLLLGDPQQLPQVSQG HPEP+D SAL + G LP E GYFL + Sbjct 778 ASTIAVGVAARNLLLLGDPQQLPQVSQGRHPEPIDGSALGRVSAGHQVLPPEYGYFLAET 837 Query 942 YRMHPAVCAAVSALSYEGRLCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAI 1001 RM P + AVS LSYEG L +H + +L G PG+H V H GN+ SPEE EA+ Sbjct 838 RRMRPELVRAVSVLSYEGWLRAHPAAREL-QLHGVEPGLHPVAVRHTGNATASPEE-EAV 895 Query 1002 LAEL-RQLLGSPWTDEHGTR---PLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRV 1057 +A+L +L+G WTD R PL +DV+V+ PYNAQ+A VR + +AG GVRV Sbjct 896 VADLIGELVGRSWTDAGAGRYDDPLGEADVIVVTPYNAQLAEVRAAVEAAGFA---GVRV 952 Query 1058 GTVDKFQGGQAPVVFISMTASSADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQ 1117 GTVDKFQG +A V +S+ SS + PRG+SFLL +NRLNVAVSRA++AA +V LT+ Sbjct 953 GTVDKFQGQEAVVAIVSLAVSSTAEAPRGMSFLLMKNRLNVAVSRAKWAAYLVHLPELTE 1012 Query 1118 YLPATPDGLVDLGAFLGLTS 1137 +LP TP G+ DL F+ L Sbjct 1013 FLPTTPAGVGDLSTFIRLVE 1032 >gi|281415292|ref|ZP_06247034.1| predicted nuclease (RecB family) protein [Micrococcus luteus NCTC 2665] Length=1196 Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust. Identities = 528/1198 (45%), Positives = 670/1198 (56%), Gaps = 81/1198 (6%) Query 7 SIVYSASDLAAAARCQYALLR-EFDAKLGRGPAVAVDDELMARAAVLGSAHEGRRLDQLR 65 S + S SD+ AAA C Y LR D KLGR P + V D + R + LG HE R L +L Sbjct 10 SFMLSPSDITAAATCTYGWLRGTVDPKLGRVPRIGVADAFLGRVSRLGDDHESRVLARLE 69 Query 66 HEFG-DAVAIIGRPA-YTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFLI-- 121 E G D V + RP YTP G+ AA + T A+A VV+Q + DG F G ADFL+ Sbjct 70 AEHGADQVVRLDRPERYTPEGVRAARERTAAALAARPAVVFQGMLHDGAFGGLADFLVLR 129 Query 122 -RDGH---RYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYR 177 + H Y V DTKLAR VTALLQ+AAYAD L GVP A L LGDG+ Sbjct 130 TDEEHPEGAYEVVDTKLARHARVTALLQIAAYADLLDGMGVPRARQGSLWLGDGSRHVAD 189 Query 178 VGELIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGG 237 + E+IPVYR QRA L+ LL H AG RW D+R+ C C C E + D+LL G Sbjct 190 LDEVIPVYRHQRARLEALLQDHVAAGEPARWGDDRLSVCGACEACEEAVTEHRDVLLTAG 249 Query 238 MRVRQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDT-GAPQFEIV 296 QR +L EAGITTI +LA AP G+ L QA +Q+ G P IV Sbjct 250 ATRLQRTRLREAGITTIEQLAASVAPPEGMARRTWEALREQAAIQLEPAGADGLPPHRIV 309 Query 297 DPRPLTLLPEPNPGDLFFDFEGDPLW-TADGKQWGLEYLFGVLEAGRAGV---------F 346 DPR + LP P+ GD+FFDFEGDPLW +ADG GLEYL+G +EA F Sbjct 310 DPRAVAGLPVPDAGDVFFDFEGDPLWVSADGSMEGLEYLWGWVEAPGGDTARTASADFRF 369 Query 347 RPLWAHDRTAERQALTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVD 406 LWA R AER AL F+A V RR HP M IYHYA YE TAL RL R+G+GE ++D Sbjct 370 TGLWADTRAAERAALERFVAFVEARRAAHPGMRIYHYAAYEVTALRRLTVRHGVGERELD 429 Query 407 DLLRNGVLVDLYPLVRKSIRVGTDSFSLKALEPLYLGTQPRSGD-VTTAADSINSYARYC 465 D LR G+ VDLY VR ++R G S+S+K LEPLY+G + R+ D VTTAADS+ Y RY Sbjct 430 DWLRAGLFVDLYSTVRAALRAGVPSYSIKKLEPLYMGAEHRAEDGVTTAADSVTEYHRYV 489 Query 466 ELRAAGRIDEAATVLKEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDA---- 521 AG + A + +IE YN YDC ST LRDWLL + E + +P DA Sbjct 490 AAMEAGDTEVARAIRADIEDYNRYDCVSTARLRDWLLAQV-EPEEAAVADRPADDAATEN 548 Query 522 DPI---------DDGDSLASVLSKFTG--DAAAGERTPE------QTAVALLAAARGYHR 564 +P+ D AS+ + G D A G PE + +ALLAA GY Sbjct 549 EPLVEAAPSLQEQDAALAASLQALADGERDEAGGTGAPEAELDGGRRGIALLAAGLGYFA 608 Query 565 REDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVTVDWHMPPRARKPQRRVRLTGELAR 624 RE+KP WWA FDR DEW + + W P P R + +TG L Sbjct 609 RENKPLWWAMFDRAVSAPDEWQEPRANLVFDTVESVGAWERPTPRSNPARTLTVTGRLEP 668 Query 625 G---------DLNGNVFALYE-PPAPPGMTDNPDR-RAAGPAAVVETDDPTVPTE--VVI 671 G + ALYE PP + N R ++ P V E ++ P V + Sbjct 669 GTEVRPRRNSQERFKLNALYEQPPRWAELAPNAVRWQSRSPVDVAEVEE-IAPGRFRVNL 727 Query 672 VERTGS--DGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPSTALMDVLLR 729 ++R + + ++P A+ V L E I AA A +LP A+ D+L R Sbjct 728 LQRLSAKYEPEPHAEVPMAVFHLNYVRPGGLLERIREQAAEAARRG-RLPDGAVFDILAR 786 Query 730 RPPRT--RSGAALPRS-----SDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVIAE 782 R PRT R+ AA+ D V + A SY+AV GPPGTGKTY +R + E Sbjct 787 RAPRTTGRTLAAIGADVRDGRRDGVGGLVEAVESARGSYVAVQGPPGTGKTYVGSRAVKE 846 Query 783 LVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTA-GRWQSIDGSQYTEF 841 L+ + W +GV AQSHA VEN L+ +I G+DP +V K+P D RW S+ S+ F Sbjct 847 LL-DRGWTVGVTAQSHAVVENFLDQLIGVGVDPDRVGKEPKDPDGPHRWTSLSSSEVHAF 905 Query 842 IRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDPQ 901 + G V+GGTAW FAN P +DLLV+DEAGQ LA+ + + A +LLLGDPQ Sbjct 906 L--APGRVLGGTAWTFANAAAQP---VDLLVVDEAGQLSLAHLLGASALAETVLLLGDPQ 960 Query 902 QLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGRL 961 QLPQVS+G HP+P+ +AL+W+ +G L +RG+FLD S+RMH A+ AVS LSY GRL Sbjct 961 QLPQVSRGEHPQPIGDAALTWIAEGAPVLRADRGFFLDTSWRMHSALTHAVSELSYAGRL 1020 Query 962 CSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWT---DEHG 1018 + E T RRLDG PG+H V H GN++ SPEEA A++ ++ LLG W+ D+ G Sbjct 1021 GAREEVTDARRLDGVEPGLHPWPVSHTGNAVSSPEEAAAVVEIIQSLLGRTWSTGPDDPG 1080 Query 1019 TRPLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTAS 1078 RPL SDV+V+APYNAQVA VR L +AGL +G VGTVDKFQG +A V ++M AS Sbjct 1081 -RPLEPSDVIVVAPYNAQVATVREALDAAGL---EGTTVGTVDKFQGREAAVAILTMAAS 1136 Query 1079 SADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLT 1136 S +VPRG+ FLLNRNRLNV++SR Q+AA +V S L LP P+ L +GAFL L Sbjct 1137 SPQEVPRGLDFLLNRNRLNVSISRGQWAAYLVHSPALADALPTGPEDLPMIGAFLRLV 1194 >gi|239918505|ref|YP_002958063.1| nuclease (RecB family) [Micrococcus luteus NCTC 2665] gi|239839712|gb|ACS31509.1| predicted nuclease (RecB family) [Micrococcus luteus NCTC 2665] Length=1196 Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust. Identities = 528/1198 (45%), Positives = 670/1198 (56%), Gaps = 81/1198 (6%) Query 7 SIVYSASDLAAAARCQYALLR-EFDAKLGRGPAVAVDDELMARAAVLGSAHEGRRLDQLR 65 S + S SD+ AAA C Y LR D KLGR P + V D + R + LG HE R L +L Sbjct 10 SFMLSPSDITAAATCTYGWLRGTVDPKLGRVPRIGVADAFLGRVSRLGDDHESRVLARLE 69 Query 66 HEFG-DAVAIIGRPA-YTPAGLAAAADATRRAIANHAPVVYQAAMFDGRFVGFADFLI-- 121 E G D V + RP YTP G+ AA + T A+A VV+Q + DG F G ADFL+ Sbjct 70 AEHGADQVVRLDRPERYTPEGVRAARERTAAALAARPAVVFQGMLHDGAFGGLADFLVLR 129 Query 122 -RDGH---RYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELELGDGTIVRYR 177 + H Y V DTKLAR VTALLQ+AAYAD L GVP A L LGDG+ Sbjct 130 TDEEHPEGAYEVVDTKLARHARVTALLQIAAYADLLDGMGVPRARQGSLWLGDGSRHVAD 189 Query 178 VGELIPVYRSQRALLQRLLDGHYTAGTAVRWDDERVQACFRCPQCTERLRASDDLLLVGG 237 + E+IPVYR QRA L+ LL H AG RW D+R+ C C C E + D+LL G Sbjct 190 LDEVIPVYRHQRARLEALLQDHVAAGEPARWGDDRLSVCGACEACEEAVTEHRDVLLTAG 249 Query 238 MRVRQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIRQRDT-GAPQFEIV 296 QR +L EAGITTI +LA AP G+ L QA +Q+ G P IV Sbjct 250 ATRLQRTRLREAGITTIEQLAASVAPPEGMARRTWEALREQAAIQLEPAGADGLPPHRIV 309 Query 297 DPRPLTLLPEPNPGDLFFDFEGDPLW-TADGKQWGLEYLFGVLEAGRAGV---------F 346 DPR + LP P+ GD+FFDFEGDPLW +ADG GLEYL+G +EA F Sbjct 310 DPRAVAGLPVPDAGDVFFDFEGDPLWVSADGSMEGLEYLWGWVEAPGGDTARTASADFRF 369 Query 347 RPLWAHDRTAERQALTDFLAIVARRRRRHPNMHIYHYAPYEKTALLRLVGRYGIGEDDVD 406 LWA R AER AL F+A V RR HP M IYHYA YE TAL RL R+G+GE ++D Sbjct 370 TGLWADTRAAERAALERFVAFVEARRAAHPGMRIYHYAAYEVTALRRLTVRHGVGERELD 429 Query 407 DLLRNGVLVDLYPLVRKSIRVGTDSFSLKALEPLYLGTQPRSGD-VTTAADSINSYARYC 465 D LR G+ VDLY VR ++R G S+S+K LEPLY+G + R+ D VTTAADS+ Y RY Sbjct 430 DWLRAGLFVDLYSTVRAALRAGVPSYSIKKLEPLYMGAEHRAEDGVTTAADSVTEYHRYV 489 Query 466 ELRAAGRIDEAATVLKEIEGYNHYDCRSTRALRDWLLMRAWEAGVTPIGAQPVPDA---- 521 AG + A + +IE YN YDC ST LRDWLL + E + +P DA Sbjct 490 AAMEAGDTEVARAIRADIEDYNRYDCVSTARLRDWLLAQV-EPEEAAVADRPADDAATEN 548 Query 522 DPI---------DDGDSLASVLSKFTG--DAAAGERTPE------QTAVALLAAARGYHR 564 +P+ D AS+ + G D A G PE + +ALLAA GY Sbjct 549 EPLVEAAPSLQEQDAALAASLQALADGERDEAGGTGAPEAELDGGRRGIALLAAGLGYFA 608 Query 565 REDKPFWWAHFDRLNYPVDEWSDSTDVFLASEASVTVDWHMPPRARKPQRRVRLTGELAR 624 RE+KP WWA FDR DEW + + W P P R + +TG L Sbjct 609 RENKPLWWAMFDRAVSAPDEWQEPRANLVFDTVESVGAWERPTPRSNPARTLTVTGRLEP 668 Query 625 G---------DLNGNVFALYE-PPAPPGMTDNPDR-RAAGPAAVVETDDPTVPTE--VVI 671 G + ALYE PP + N R ++ P V E ++ P V + Sbjct 669 GTEVRPRRNSQERFKLNALYEQPPRWAELAPNAVRWQSRSPVDVAEVEE-IAPGRFRVNL 727 Query 672 VERTGS--DGNTFQQLPFALAPGPPVPTTALRESIESTAAAVASGSPQLPSTALMDVLLR 729 ++R + + ++P A+ V L E I A A A +LP A+ D+L R Sbjct 728 LQRLSAKYEPEPHAEVPMAVFHLNYVRPGGLLERIREQADAAARRG-RLPDGAVFDILAR 786 Query 730 RPPRT--RSGAALPRS-----SDPVTDIAAAALDLDSSYLAVHGPPGTGKTYTAARVIAE 782 R PRT R+ AA+ D V + A SY+AV GPPGTGKTY +R + E Sbjct 787 RAPRTTGRTLAAIGADVRDGRRDGVGGLVEAVESARGSYVAVQGPPGTGKTYVGSRAVKE 846 Query 783 LVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTA-GRWQSIDGSQYTEF 841 L+ + W +GV AQSHA VEN L+ +I G+DP +V K+P D RW S+ S+ F Sbjct 847 LL-DRGWTVGVTAQSHAVVENFLDQLIGVGVDPDRVGKEPKDPDGPHRWTSLSSSEVHAF 905 Query 842 IRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDPQ 901 + G V+GGTAW FAN P +DLLV+DEAGQ LA+ + + A +LLLGDPQ Sbjct 906 L--APGRVLGGTAWTFANAAAQP---VDLLVVDEAGQLSLAHLLGASALAETVLLLGDPQ 960 Query 902 QLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLDRSYRMHPAVCAAVSALSYEGRL 961 QLPQVS+G HP+P+ +AL+W+ +G L +RG+FLD S+RMH A+ AVS LSY GRL Sbjct 961 QLPQVSRGEHPQPIGDAALTWIAEGAPVLRADRGFFLDTSWRMHSALTHAVSELSYAGRL 1020 Query 962 CSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAEAILAELRQLLGSPWT---DEHG 1018 + E T RRLDG PG+H V H GN++ SPEEA A++ ++ LLG W+ D+ G Sbjct 1021 GAREEVTDARRLDGVEPGLHPWPVSHTGNAVSSPEEAAAVVEIIQSLLGRTWSTGPDDPG 1080 Query 1019 TRPLAASDVLVLAPYNAQVALVRRRLASAGLGGADGVRVGTVDKFQGGQAPVVFISMTAS 1078 RPL SDV+V+APYNAQVA VR L +AGL +G VGTVDKFQG +A V ++M AS Sbjct 1081 -RPLEPSDVIVVAPYNAQVATVREALDAAGL---EGTTVGTVDKFQGREAAVAILTMAAS 1136 Query 1079 SADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSELLTQYLPATPDGLVDLGAFLGLT 1136 S +VPRG+ FLLNRNRLNV++SR Q+AA +V S L LP P+ L +GAFL L Sbjct 1137 SPQEVPRGLDFLLNRNRLNVSISRGQWAAYLVHSPALADALPTGPEDLPMIGAFLRLV 1194 >gi|256823963|ref|YP_003147923.1| nuclease (RecB family) [Kytococcus sedentarius DSM 20547] gi|256687356|gb|ACV05158.1| predicted nuclease (RecB family) [Kytococcus sedentarius DSM 20547] Length=1270 Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust. Identities = 536/1284 (42%), Positives = 682/1284 (54%), Gaps = 161/1284 (12%) Query 1 VFVTGD-SIVYSASDLAAAARCQYALLREFDAKLGRGPAVAVDDELMARAAVLGSAHEGR 59 +F+ D S+ SA DL A+ C++ALL D LGR P ++D + R A LG+ HE R Sbjct 1 MFLLDDGSLATSAQDLRVASECEFALLHRLDVTLGRSPREVLEDPMAERLAELGNVHEER 60 Query 60 RLDQLRHEFGDAVAIIGRP-AYTPAGLAAAADATRR-------AIANHAPVVYQAAMFDG 111 L +L+ V + RP ++ L T + + + APV+ A DG Sbjct 61 ELARLQQLHPGGVVVGERPRGFSRQALEEGMAWTVQRCAEPAVQVVHQAPVLLTGAGADG 120 Query 112 R----FVGFADFLIRDGHRYRVADTKLARSPTVTALLQLAAYADALVHSGVPVAADAELE 167 + G ADF++R +RV DTKLA TV ++LQ+AAYA AL GV VA + +L Sbjct 121 QPLAPLSGLADFVVRTPQGWRVGDTKLAAHSTVASMLQVAAYAHALAEQGVAVAPEVDLV 180 Query 168 LGDGTIVRYRVGELIPVYRSQRALLQRLLDGHYTAG---TAVRWDDERVQACFRCPQCTE 224 LG G + + +G + V R + A L RLL H G AV W + AC RC CT Sbjct 181 LGTGAVESHPLGPTVAVMRDRWARLSRLLREHGVGGRDGEAVEWGAPGIGACGRCEVCTP 240 Query 225 RLRASDDLLLVGGMRVRQRDKLLEAGITTIAELADHTAPVPGLTTNALGKLTAQAKLQIR 284 R A+DDLL V M + +R L GITT+AELA T G+ + L QA LQ+R Sbjct 241 RAAAADDLLGVARMSLARRKLLHGRGITTMAELAAATTGPRGMRESDFATLRDQAALQVR 300 Query 285 QR---------DTGAPQF---EIVDPRPLTLLPEPNPGDLFFDFEGDPLWTAD-GKQWGL 331 R D AP+ E+V L LPEP+PGD+FFDFEGDPLW G GL Sbjct 301 ARELTAEARTQDPHAPEVVLSEVVSAEALDALPEPSPGDVFFDFEGDPLWRPHAGAPAGL 360 Query 332 EYLFGVLEAGRAG--------------VFRPLWAHDRTAERQALTDFLAIVARRRRRHPN 377 EYLFGV AG +R WAHDR E+QAL DFL +A RRR +P Sbjct 361 EYLFGVEVLDTAGDDPGAYGPPDAAGARYRAWWAHDRAGEKQALADFLGWLAARRRAYPG 420 Query 378 MHIYHYAPYEKTALLRLVGRYGIGEDDVDDLLRNGVLVDLYPLVRKSIRVGTDSFSLKAL 437 +H+YHYA YE TAL RL +G G +++DDLLR V VDLY VR IRV ++S+K L Sbjct 421 LHVYHYAAYEVTALKRLTAAHGTGTEELDDLLRQHVFVDLYATVRAGIRVSQPTYSIKKL 480 Query 438 EPLYLGTQPRSGDVTTAADSINSYARYCELRAAGRIDEAATVLKEIEGYNHYDCRSTRAL 497 EPLY+ + G VT ADSI Y RYC R AG A+ +L+ I YN DC ST L Sbjct 481 EPLYMPARGADG-VTGGADSIVEYQRYCSARDAGDTARASELLERIRAYNELDCESTWRL 539 Query 498 RDWLLMRAWEAGVTPIGAQPVPDADPIDDGDSLASVLSKFTG--DAAA------------ 543 RDWLL R + G P D D S + TG D AA Sbjct 540 RDWLLER-YRQHRQEQGQPDTPQPDTGTDAPSGVDGTAAPTGTDDTAARGDGTLPGTDAP 598 Query 544 -------------------------GERTPEQTAVALLAAARGYHRREDKPFWWAHFDRL 578 GERT + A+ +L +A Y+RRE KP WWAHF+RL Sbjct 599 ALTPDRWVAAQRVEDAFGALDLPPRGERTAAEQALTMLGSAPQYYRREHKPHWWAHFERL 658 Query 579 NYPVDEWSDSTDVFLASEASVTVDWHMPPRARKPQRRVRLTGELARGDLNGNVFA----- 633 PV EW + DV A T DW+ P P+R + AR D G A Sbjct 659 ALPVAEWPLTGDVLAVDRAEWTSDWYQPTPRSNPRRTL-----TARVDTGGRPLAAGTSL 713 Query 634 --LYEPPAPPGMTDNPDR-RAAGPAAVVETD---DPTVPTEVVIVERTGSDGNTFQQ--- 684 ++ P P G+ P A P+A D D EV +E G+ + Sbjct 714 VPVFGSPLPDGLECEPGYPHAQWPSAAEVLDSHSDTATGLEVCTLELARPKGSANRPGIP 773 Query 685 ----LPFALAPGPPVPTTALRESIESTAAAVA-------------SGSPQLPSTALMDVL 727 LP P P T L ++ AAA + P LP++A +D+L Sbjct 774 ETDCLPVGFGPTAPPGTKNLDAALLDLAAAALSASATSAATPGEPAAQPVLPASAGLDLL 833 Query 728 LRRPPRTRSGAA------------LPRSSDPVTD-----IAAAALDLDSSYLAVHGPPGT 770 RRPPR A LP+ +P D + AA L +SYLAV GPPGT Sbjct 834 ARRPPRLDGEAPASIDDAPPAPTLLPQVGEPGIDTPLDAVTAAVGLLQNSYLAVQGPPGT 893 Query 771 GKTYTAARVIAELVTEHAWRIGVVAQSHATVENLLEGVISAGLDPGQVAKKPHDHTAGR- 829 GKTY +RV+ LV + WRIGVVAQSHA VEN L G + AG+ +V K P AGR Sbjct 894 GKTYLGSRVVRSLV-QAGWRIGVVAQSHAAVENFLAGCVRAGVPDVRVGKAP---AAGRP 949 Query 830 ------WQSI-DGSQ---YTEFIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQF 879 W S+ GS TE + G V+GGTAW F++ + +P+ LDLLV+DEAGQF Sbjct 950 ADGATCWTSLRSGSTPAWITEQLDAGHGFVVGGTAWTFSHPDLLPEC-LDLLVVDEAGQF 1008 Query 880 CLANTIAVAPAATNLLLLGDPQQLPQVSQGTHPEPVDTSALSWLVDGQHTLPDERGYFLD 939 LA +A + A NLLLLGDPQQLPQVSQG HPEP+D SAL WL+ + LP GYFLD Sbjct 1009 SLAPLLACSRVARNLLLLGDPQQLPQVSQGIHPEPLDASALGWLIGSERVLPQRYGYFLD 1068 Query 940 RSYRMHPAVCAAVSALSYEGRLCSHTERTAVRRLDGYPPGVHTRGVHHKGNSIESPEEAE 999 ++RMHPA+ VS L+Y+GRL SH E T R ++G PG+H R V H+ NS+ SPEEA+ Sbjct 1069 TTWRMHPALTERVSTLAYDGRLGSHDEVTTGRSVEGVEPGLHVRVVEHEDNSVASPEEAD 1128 Query 1000 AILAELRQLLGSPWTD---EHG--TRPLAASDVLVLAPYNAQVALVRRRLASAGLGGADG 1054 A++A + L+G +TD E G RPL+A+DVLV+APYNAQV L+R RL+ AG Sbjct 1129 AVVALVADLVGRRFTDTGAEPGRRERPLSAADVLVVAPYNAQVNLLRNRLSQAGF---PD 1185 Query 1055 VRVGTVDKFQGGQAPVVFISMTASSADDVPRGISFLLNRNRLNVAVSRAQYAAVIVRSEL 1114 VGTVD FQG +APVV +SMTAS+ D V RG++FL + +RLNVA+SR Q AA +VRS Sbjct 1186 TPVGTVDAFQGQEAPVVVLSMTASARDRVSRGMAFLFDVHRLNVAISRGQVAAYVVRSRA 1245 Query 1115 LTQYLPATPDGLVDLGAFLGLTST 1138 LT PA+P L+ LGAFL LT+ Sbjct 1246 LTDIAPASPRDLLALGAFLELTAN 1269 Lambda K H 0.319 0.135 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2885159941560 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40