BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1262c
Length=144
Score E
Sequences producing significant alignments: (Bits) Value
gi|15840708|ref|NP_335745.1| HIT family protein [Mycobacterium t... 290 6e-77
gi|15608402|ref|NP_215778.1| HIT-like protein [Mycobacterium tub... 289 9e-77
gi|31792454|ref|NP_854947.1| HIT-like protein [Mycobacterium bov... 286 9e-76
gi|340626275|ref|YP_004744727.1| hypothetical protein MCAN_12761... 284 3e-75
gi|167969585|ref|ZP_02551862.1| HIT family protein [Mycobacteriu... 280 6e-74
gi|240172638|ref|ZP_04751297.1| hypothetical protein MkanA1_2521... 245 2e-63
gi|342862140|ref|ZP_08718783.1| hypothetical protein MCOL_24736 ... 243 5e-63
gi|118467108|ref|YP_880654.1| HIT family protein [Mycobacterium ... 243 5e-63
gi|41408608|ref|NP_961444.1| hypothetical protein MAP2510 [Mycob... 243 5e-63
gi|254820135|ref|ZP_05225136.1| hypothetical protein MintA_09421... 242 1e-62
gi|296170170|ref|ZP_06851765.1| HIT family protein [Mycobacteriu... 239 1e-61
gi|118619589|ref|YP_907921.1| Hit-like protein [Mycobacterium ul... 234 3e-60
gi|118468021|ref|YP_889279.1| HIT family protein [Mycobacterium ... 228 2e-58
gi|302148927|pdb|3O0M|A Chain A, Crystal Structure Of A Zn-Bound... 228 2e-58
gi|120405408|ref|YP_955237.1| histidine triad (HIT) protein [Myc... 224 5e-57
gi|145222827|ref|YP_001133505.1| histidine triad (HIT) protein [... 217 5e-55
gi|126436543|ref|YP_001072234.1| histidine triad (HIT) protein [... 209 1e-52
gi|108800918|ref|YP_641115.1| histidine triad (HIT) protein [Myc... 208 3e-52
gi|333989872|ref|YP_004522486.1| Hit-like protein [Mycobacterium... 197 6e-49
gi|169628501|ref|YP_001702150.1| histidine triad (HIT) protein [... 177 4e-43
gi|343924707|ref|ZP_08764249.1| putative HIT family protein [Gor... 144 3e-33
gi|289761414|ref|ZP_06520792.1| hypothetical hit-like protein [M... 144 5e-33
gi|262201931|ref|YP_003273139.1| histidine triad (HIT) protein [... 140 8e-32
gi|317508536|ref|ZP_07966201.1| HIT domain-containing protein [S... 139 9e-32
gi|326385280|ref|ZP_08206942.1| histidine triad (HIT) protein [G... 139 1e-31
gi|296394253|ref|YP_003659137.1| histidine triad (HIT) protein [... 137 5e-31
gi|54022979|ref|YP_117221.1| hypothetical protein nfa10120 [Noca... 137 6e-31
gi|333920961|ref|YP_004494542.1| hypothetical protein AS9A_3300 ... 130 5e-29
gi|229494588|ref|ZP_04388351.1| histidine triad domain protein [... 116 9e-25
gi|226304155|ref|YP_002764113.1| HIT family protein [Rhodococcus... 116 1e-24
gi|229494230|ref|ZP_04387993.1| histidine triad domain protein [... 113 8e-24
gi|226304515|ref|YP_002764473.1| HIT family protein [Rhodococcus... 111 3e-23
gi|291303639|ref|YP_003514917.1| histidine triad (HIT) protein [... 107 5e-22
gi|332671276|ref|YP_004454284.1| histidine triad (HIT) protein [... 107 6e-22
gi|313672913|ref|YP_004051024.1| histidine triad (hit) protein [... 106 1e-21
gi|134103739|ref|YP_001109400.1| histidine triad (HIT) protein [... 106 1e-21
gi|226364289|ref|YP_002782071.1| HIT family protein [Rhodococcus... 105 3e-21
gi|312138260|ref|YP_004005596.1| hypothetical protein REQ_07960 ... 104 3e-21
gi|111021759|ref|YP_704731.1| histidine triad (HIT) protein [Rho... 104 5e-21
gi|255585620|ref|XP_002533497.1| histidine triad (hit) protein, ... 103 9e-21
gi|223934199|ref|ZP_03626136.1| histidine triad (HIT) protein [S... 103 9e-21
gi|299532050|ref|ZP_07045445.1| histidine triad (HIT) protein [C... 103 1e-20
gi|297792041|ref|XP_002863905.1| histidine triad family protein ... 103 1e-20
gi|115487924|ref|NP_001066449.1| Os12g0233300 [Oryza sativa Japo... 103 1e-20
gi|224069894|ref|XP_002303075.1| predicted protein [Populus tric... 102 1e-20
gi|42573622|ref|NP_974907.1| protein histidine triad nucleotide-... 102 2e-20
gi|118488050|gb|ABK95845.1| unknown [Populus trichocarpa] 102 2e-20
gi|15921763|ref|NP_377432.1| histidine triad nucleotide-binding ... 102 2e-20
gi|125536180|gb|EAY82668.1| hypothetical protein OsI_37888 [Oryz... 102 2e-20
gi|225469892|ref|XP_002271191.1| PREDICTED: hypothetical protein... 102 3e-20
>gi|15840708|ref|NP_335745.1| HIT family protein [Mycobacterium tuberculosis CDC1551]
gi|13880897|gb|AAK45559.1| HIT family protein [Mycobacterium tuberculosis CDC1551]
Length=156
Score = 290 bits (741), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 144/144 (100%), Positives = 144/144 (100%), Gaps = 0/144 (0%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM
Sbjct 13 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 72
Query 61 VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRR 120
VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRR
Sbjct 73 VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRR 132
Query 121 DPDREATGRILREALAQQDAAAQD 144
DPDREATGRILREALAQQDAAAQD
Sbjct 133 DPDREATGRILREALAQQDAAAQD 156
>gi|15608402|ref|NP_215778.1| HIT-like protein [Mycobacterium tuberculosis H37Rv]
gi|148661049|ref|YP_001282572.1| HIT family protein [Mycobacterium tuberculosis H37Ra]
gi|148822479|ref|YP_001287233.1| HIT family protein [Mycobacterium tuberculosis F11]
28 more sequence titles
Length=144
Score = 289 bits (740), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 144/144 (100%), Positives = 144/144 (100%), Gaps = 0/144 (0%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM
Sbjct 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
Query 61 VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRR 120
VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRR
Sbjct 61 VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRR 120
Query 121 DPDREATGRILREALAQQDAAAQD 144
DPDREATGRILREALAQQDAAAQD
Sbjct 121 DPDREATGRILREALAQQDAAAQD 144
>gi|31792454|ref|NP_854947.1| HIT-like protein [Mycobacterium bovis AF2122/97]
gi|121637190|ref|YP_977413.1| HIT family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224989665|ref|YP_002644352.1| hypothetical HIT-like protein [Mycobacterium bovis BCG str. Tokyo
172]
18 more sequence titles
Length=144
Score = 286 bits (731), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 143/144 (99%), Positives = 143/144 (99%), Gaps = 0/144 (0%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM
Sbjct 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
Query 61 VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRR 120
VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLP RNGDKLSVAKGMMLRR
Sbjct 61 VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPRRNGDKLSVAKGMMLRR 120
Query 121 DPDREATGRILREALAQQDAAAQD 144
DPDREATGRILREALAQQDAAAQD
Sbjct 121 DPDREATGRILREALAQQDAAAQD 144
>gi|340626275|ref|YP_004744727.1| hypothetical protein MCAN_12761 [Mycobacterium canettii CIPT
140010059]
gi|340004465|emb|CCC43608.1| hypothetical HIT-like protein [Mycobacterium canettii CIPT 140010059]
Length=144
Score = 284 bits (726), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/144 (99%), Positives = 142/144 (99%), Gaps = 0/144 (0%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM
Sbjct 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
Query 61 VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRR 120
VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLP RNGDKLSVAK MMLRR
Sbjct 61 VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPRRNGDKLSVAKAMMLRR 120
Query 121 DPDREATGRILREALAQQDAAAQD 144
DPDREATGRILREALAQQDAAAQD
Sbjct 121 DPDREATGRILREALAQQDAAAQD 144
>gi|167969585|ref|ZP_02551862.1| HIT family protein [Mycobacterium tuberculosis H37Ra]
gi|297730797|ref|ZP_06959915.1| hypothetical protein MtubKR_06884 [Mycobacterium tuberculosis
KZN R506]
gi|306781657|ref|ZP_07419994.1| hypothetical protein TMBG_01345 [Mycobacterium tuberculosis SUMu002]
23 more sequence titles
Length=141
Score = 280 bits (716), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 140/141 (99%), Positives = 141/141 (100%), Gaps = 0/141 (0%)
Query 4 VFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVAI 63
+FCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVAI
Sbjct 1 MFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVAI 60
Query 64 GQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRRDPD 123
GQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRRDPD
Sbjct 61 GQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRRDPD 120
Query 124 REATGRILREALAQQDAAAQD 144
REATGRILREALAQQDAAAQD
Sbjct 121 REATGRILREALAQQDAAAQD 141
>gi|240172638|ref|ZP_04751297.1| hypothetical protein MkanA1_25210 [Mycobacterium kansasii ATCC
12478]
Length=142
Score = 245 bits (625), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/141 (84%), Positives = 132/141 (94%), Gaps = 0/141 (0%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
MPCVFCAI+AGEAPAI IYED GYLAILDIRPF+RGHTLVLPKRHTVD+TDTPP+ LADM
Sbjct 1 MPCVFCAIVAGEAPAIPIYEDDGYLAILDIRPFSRGHTLVLPKRHTVDITDTPPDTLADM 60
Query 61 VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRR 120
V IGQRIA+AARAT+LADAT+IAINDG AAFQTVFH+HLHVLP RNGDKL++AK M+LRR
Sbjct 61 VTIGQRIAKAARATELADATNIAINDGSAAFQTVFHIHLHVLPRRNGDKLALAKAMVLRR 120
Query 121 DPDREATGRILREALAQQDAA 141
DPDREATGR+LREALA+ D +
Sbjct 121 DPDREATGRMLREALARIDTS 141
>gi|342862140|ref|ZP_08718783.1| hypothetical protein MCOL_24736 [Mycobacterium colombiense CECT
3035]
gi|342130444|gb|EGT83759.1| hypothetical protein MCOL_24736 [Mycobacterium colombiense CECT
3035]
Length=144
Score = 243 bits (621), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 118/144 (82%), Positives = 132/144 (92%), Gaps = 0/144 (0%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
M CVFCAI+AGEAPAIRIYED YLAILDIRPFTRGHTLVLPKRH+VDLTDTPPE LA M
Sbjct 1 MSCVFCAIVAGEAPAIRIYEDDDYLAILDIRPFTRGHTLVLPKRHSVDLTDTPPETLAGM 60
Query 61 VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRR 120
V +GQRIARAAR+T+LADAT+IA+NDG AAFQTVFH+HLHVLP RNGDKLSVAKG++LRR
Sbjct 61 VTLGQRIARAARSTELADATNIAVNDGSAAFQTVFHIHLHVLPRRNGDKLSVAKGLLLRR 120
Query 121 DPDREATGRILREALAQQDAAAQD 144
DPDR+ATG+ILR ALA+ DA+ D
Sbjct 121 DPDRDATGQILRTALARIDASQPD 144
>gi|118467108|ref|YP_880654.1| HIT family protein [Mycobacterium avium 104]
gi|118168395|gb|ABK69292.1| HIT family protein [Mycobacterium avium 104]
Length=147
Score = 243 bits (621), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/144 (84%), Positives = 131/144 (91%), Gaps = 0/144 (0%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
M CVFCAI+AGEAPAIRIYED YLAILDIRPFTRGHTLVLPKRH+VDLTDTPPE LA M
Sbjct 4 MSCVFCAIVAGEAPAIRIYEDDDYLAILDIRPFTRGHTLVLPKRHSVDLTDTPPETLAGM 63
Query 61 VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRR 120
V +GQRIARAAR+T+LADAT+IAINDG AAFQTVFH+HLHVLP RNGDKLSVAKGM+LRR
Sbjct 64 VTLGQRIARAARSTELADATNIAINDGSAAFQTVFHIHLHVLPRRNGDKLSVAKGMLLRR 123
Query 121 DPDREATGRILREALAQQDAAAQD 144
DPDR+ATG+ILR ALA+ DA D
Sbjct 124 DPDRDATGQILRLALARIDANQPD 147
>gi|41408608|ref|NP_961444.1| hypothetical protein MAP2510 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|254774290|ref|ZP_05215806.1| hypothetical protein MaviaA2_06435 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41396966|gb|AAS04827.1| hypothetical protein MAP_2510 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336458605|gb|EGO37572.1| HIT family hydrolase, diadenosine tetraphosphate hydrolase [Mycobacterium
avium subsp. paratuberculosis S397]
Length=144
Score = 243 bits (621), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/144 (84%), Positives = 131/144 (91%), Gaps = 0/144 (0%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
M CVFCAI+AGEAPAIRIYED YLAILDIRPFTRGHTLVLPKRH+VDLTDTPPE LA M
Sbjct 1 MSCVFCAIVAGEAPAIRIYEDDDYLAILDIRPFTRGHTLVLPKRHSVDLTDTPPETLAGM 60
Query 61 VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRR 120
V +GQRIARAAR+T+LADAT+IAINDG AAFQTVFH+HLHVLP RNGDKLSVAKGM+LRR
Sbjct 61 VTLGQRIARAARSTELADATNIAINDGSAAFQTVFHIHLHVLPRRNGDKLSVAKGMLLRR 120
Query 121 DPDREATGRILREALAQQDAAAQD 144
DPDR+ATG+ILR ALA+ DA D
Sbjct 121 DPDRDATGQILRLALARIDANQPD 144
>gi|254820135|ref|ZP_05225136.1| hypothetical protein MintA_09421 [Mycobacterium intracellulare
ATCC 13950]
Length=144
Score = 242 bits (618), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/144 (82%), Positives = 130/144 (91%), Gaps = 0/144 (0%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
M CVFCA++AGEAPAIRIYED YLAILDIRPFTRGHTLVLPKRH+VDLTDT PE LA M
Sbjct 1 MSCVFCAVVAGEAPAIRIYEDDDYLAILDIRPFTRGHTLVLPKRHSVDLTDTTPETLAGM 60
Query 61 VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRR 120
V +GQRIARAAR T+LADAT+IAINDG AAFQTVFH+HLHVLP RNGDKLSVAKGM+LRR
Sbjct 61 VTLGQRIARAARTTELADATNIAINDGSAAFQTVFHIHLHVLPRRNGDKLSVAKGMLLRR 120
Query 121 DPDREATGRILREALAQQDAAAQD 144
DPDR+ATG+ILR ALA+ DA+ D
Sbjct 121 DPDRDATGQILRNALARIDASQPD 144
>gi|296170170|ref|ZP_06851765.1| HIT family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295895162|gb|EFG74878.1| HIT family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=142
Score = 239 bits (609), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/141 (84%), Positives = 128/141 (91%), Gaps = 0/141 (0%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
M CVFCAI+AG APAIRI ED YLAILDIRPFTRGHTLV+PKRH+VDLTDTPPE LA M
Sbjct 1 MSCVFCAIVAGAAPAIRICEDDDYLAILDIRPFTRGHTLVIPKRHSVDLTDTPPETLAGM 60
Query 61 VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRR 120
V IGQRIARAARAT+LADAT+IAINDG AAFQTVFH+HLHVLP RNGDKLSVAKGM+LRR
Sbjct 61 VTIGQRIARAARATELADATNIAINDGSAAFQTVFHIHLHVLPRRNGDKLSVAKGMLLRR 120
Query 121 DPDREATGRILREALAQQDAA 141
DPDREAT +ILR ALA+ DA+
Sbjct 121 DPDREATAQILRSALARIDAS 141
>gi|118619589|ref|YP_907921.1| Hit-like protein [Mycobacterium ulcerans Agy99]
gi|183984148|ref|YP_001852439.1| Hit-like protein [Mycobacterium marinum M]
gi|118571699|gb|ABL06450.1| conserved hypothetical Hit-like protein [Mycobacterium ulcerans
Agy99]
gi|183177474|gb|ACC42584.1| conserved hypothetical Hit-like protein [Mycobacterium marinum
M]
Length=142
Score = 234 bits (598), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/141 (82%), Positives = 127/141 (91%), Gaps = 0/141 (0%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
M CVFCAI AGEAPAIRIYED LAILDIRPFTRGHTLVLPK+HTVDLTDTPPE LA M
Sbjct 1 MSCVFCAIAAGEAPAIRIYEDDNCLAILDIRPFTRGHTLVLPKKHTVDLTDTPPETLAQM 60
Query 61 VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRR 120
IGQRIA+AARAT+LADAT+I INDG AAFQTVFH+HLHVLP R+GDKLSVAKG++LRR
Sbjct 61 ATIGQRIAKAARATELADATNIGINDGSAAFQTVFHIHLHVLPRRDGDKLSVAKGLLLRR 120
Query 121 DPDREATGRILREALAQQDAA 141
D DREATGRILR+ALA+ +A+
Sbjct 121 DNDREATGRILRDALARIEAS 141
>gi|118468021|ref|YP_889279.1| HIT family protein [Mycobacterium smegmatis str. MC2 155]
gi|118169308|gb|ABK70204.1| HIT family protein [Mycobacterium smegmatis str. MC2 155]
Length=145
Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/145 (76%), Positives = 126/145 (87%), Gaps = 1/145 (0%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
M CVFCAI++G+APAIRIYED +L ILDIRPFTRGHTLV+PK HTVDLTDTPPE +A M
Sbjct 1 MSCVFCAIVSGDAPAIRIYEDENFLGILDIRPFTRGHTLVIPKTHTVDLTDTPPETVAGM 60
Query 61 VAIGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLR 119
A+GQRIARAAR + L AD +IAINDG+AAFQTVFH+HLHV+P RNGDKLS AKGM++R
Sbjct 61 AAVGQRIARAARESGLHADGNNIAINDGKAAFQTVFHIHLHVVPRRNGDKLSFAKGMVMR 120
Query 120 RDPDREATGRILREALAQQDAAAQD 144
RDPDRE +GR+LR ALAQ D+A QD
Sbjct 121 RDPDREESGRLLRAALAQLDSAEQD 145
>gi|302148927|pdb|3O0M|A Chain A, Crystal Structure Of A Zn-Bound Histidine Triad Family
Protein From Mycobacterium Smegmatis
gi|302148928|pdb|3O0M|B Chain B, Crystal Structure Of A Zn-Bound Histidine Triad Family
Protein From Mycobacterium Smegmatis
Length=149
Score = 228 bits (581), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/145 (76%), Positives = 126/145 (87%), Gaps = 1/145 (0%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
M CVFCAI++G+APAIRIYED +L ILDIRPFTRGHTLV+PK HTVDLTDTPPE +A M
Sbjct 5 MSCVFCAIVSGDAPAIRIYEDENFLGILDIRPFTRGHTLVIPKTHTVDLTDTPPETVAGM 64
Query 61 VAIGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLR 119
A+GQRIARAAR + L AD +IAINDG+AAFQTVFH+HLHV+P RNGDKLS AKGM++R
Sbjct 65 AAVGQRIARAARESGLHADGNNIAINDGKAAFQTVFHIHLHVVPRRNGDKLSFAKGMVMR 124
Query 120 RDPDREATGRILREALAQQDAAAQD 144
RDPDRE +GR+LR ALAQ D+A QD
Sbjct 125 RDPDREESGRLLRAALAQLDSAEQD 149
>gi|120405408|ref|YP_955237.1| histidine triad (HIT) protein [Mycobacterium vanbaalenii PYR-1]
gi|119958226|gb|ABM15231.1| histidine triad (HIT) protein [Mycobacterium vanbaalenii PYR-1]
Length=145
Score = 224 bits (570), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 110/145 (76%), Positives = 125/145 (87%), Gaps = 1/145 (0%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
M CVFCAI+AGEAPAIRI+ED YLAILDIRPFTRGHTLVLPK HTVDLTDTP + LA M
Sbjct 1 MSCVFCAIVAGEAPAIRIHEDDDYLAILDIRPFTRGHTLVLPKVHTVDLTDTPAQTLAGM 60
Query 61 VAIGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLR 119
A+GQRIA+AAR + L AD +IA+NDG+AAFQ+VFHVHLHV+P + GDKLS AKG++LR
Sbjct 61 TALGQRIAKAARTSGLHADGNNIAVNDGKAAFQSVFHVHLHVVPRQAGDKLSFAKGILLR 120
Query 120 RDPDREATGRILREALAQQDAAAQD 144
RDPDRE TGR+LRE LAQ DAA QD
Sbjct 121 RDPDREETGRLLREGLAQLDAAEQD 145
>gi|145222827|ref|YP_001133505.1| histidine triad (HIT) protein [Mycobacterium gilvum PYR-GCK]
gi|315443293|ref|YP_004076172.1| HIT family hydrolase, diadenosine tetraphosphate hydrolase [Mycobacterium
sp. Spyr1]
gi|145215313|gb|ABP44717.1| histidine triad (HIT) protein [Mycobacterium gilvum PYR-GCK]
gi|315261596|gb|ADT98337.1| HIT family hydrolase, diadenosine tetraphosphate hydrolase [Mycobacterium
sp. Spyr1]
Length=145
Score = 217 bits (552), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 107/145 (74%), Positives = 124/145 (86%), Gaps = 1/145 (0%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
M CVFCAI+AGEAPAIRI+ED LAILDIRPFTRGHTLV+PK HTVDLTDTP LA M
Sbjct 1 MSCVFCAIVAGEAPAIRIHEDDDQLAILDIRPFTRGHTLVIPKIHTVDLTDTPARTLAGM 60
Query 61 VAIGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLR 119
A+GQRIA+AAR + L AD +IAINDG+AAFQTVFH+HLHV+P R+GDKLS AKG+++R
Sbjct 61 AALGQRIAKAARLSGLHADGNNIAINDGKAAFQTVFHIHLHVVPRRDGDKLSFAKGVLMR 120
Query 120 RDPDREATGRILREALAQQDAAAQD 144
RDPDRE TGR+LREALA+ D A +D
Sbjct 121 RDPDREETGRLLREALAKVDTAEKD 145
>gi|126436543|ref|YP_001072234.1| histidine triad (HIT) protein [Mycobacterium sp. JLS]
gi|126236343|gb|ABN99743.1| histidine triad (HIT) protein [Mycobacterium sp. JLS]
Length=143
Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/142 (71%), Positives = 119/142 (84%), Gaps = 1/142 (0%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
M CVFC I+AG+APAIR+YED +L ILDIRPF RGHTLV+PKRHTVDLTDTP + +A M
Sbjct 1 MSCVFCDIVAGDAPAIRVYEDADFLGILDIRPFARGHTLVIPKRHTVDLTDTPADTVAGM 60
Query 61 VAIGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLR 119
IGQRIA+AAR + L AD ++ INDG+AAFQTVFH+HLHVLP R+GDKLS AK M+LR
Sbjct 61 ARIGQRIAKAARRSGLHADGNNVVINDGKAAFQTVFHIHLHVLPRRSGDKLSFAKNMVLR 120
Query 120 RDPDREATGRILREALAQQDAA 141
RDPDRE +GR+LREA+A+ D A
Sbjct 121 RDPDREESGRLLREAIAELDNA 142
>gi|108800918|ref|YP_641115.1| histidine triad (HIT) protein [Mycobacterium sp. MCS]
gi|119870058|ref|YP_940010.1| histidine triad (HIT) protein [Mycobacterium sp. KMS]
gi|108771337|gb|ABG10059.1| histidine triad (HIT) protein [Mycobacterium sp. MCS]
gi|119696147|gb|ABL93220.1| histidine triad (HIT) protein [Mycobacterium sp. KMS]
Length=143
Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/142 (70%), Positives = 119/142 (84%), Gaps = 1/142 (0%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
M CVFC I+AG+APAIR+YED +L ILDIRPF RGHTLV+PKRHTV+LTDTP + +A M
Sbjct 1 MSCVFCDIVAGDAPAIRVYEDADFLGILDIRPFARGHTLVIPKRHTVNLTDTPADTVAGM 60
Query 61 VAIGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLR 119
IGQRIA+AAR + L AD ++ INDG+AAFQTVFH+HLHVLP R+GDKLS AK M+LR
Sbjct 61 ARIGQRIAKAARRSGLHADGNNVVINDGKAAFQTVFHIHLHVLPRRSGDKLSFAKNMVLR 120
Query 120 RDPDREATGRILREALAQQDAA 141
RDPDRE +GR+LREA+A+ D A
Sbjct 121 RDPDREESGRLLREAIAELDNA 142
>gi|333989872|ref|YP_004522486.1| Hit-like protein [Mycobacterium sp. JDM601]
gi|333485840|gb|AEF35232.1| Hit-like protein [Mycobacterium sp. JDM601]
Length=145
Score = 197 bits (500), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/145 (67%), Positives = 121/145 (84%), Gaps = 4/145 (2%)
Query 4 VFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVAI 63
+FCA+++G+APA+RI+ED YLA LDIRPFTRGHTLV+PK+H VDLTDTP LA M+A+
Sbjct 1 MFCAVVSGDAPAVRIFEDDDYLAFLDIRPFTRGHTLVVPKQHFVDLTDTPAATLAGMLAV 60
Query 64 GQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRN---GDKLSVAKGMMLR 119
G R+ARAARA+ L AD ++AINDG+AAFQ+VFH+HLHV+P R GDKLS AKGM++R
Sbjct 61 GHRVARAARASGLHADGNNLAINDGKAAFQSVFHIHLHVVPRRGVGLGDKLSFAKGMLVR 120
Query 120 RDPDREATGRILREALAQQDAAAQD 144
RDPDRE TG +LR A+A+ DAAA D
Sbjct 121 RDPDRERTGELLRTAVARLDAAAPD 145
>gi|169628501|ref|YP_001702150.1| histidine triad (HIT) protein [Mycobacterium abscessus ATCC 19977]
gi|169240468|emb|CAM61496.1| Hypothetical histidine triad (HIT) protein [Mycobacterium abscessus]
Length=139
Score = 177 bits (449), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/136 (62%), Positives = 105/136 (78%), Gaps = 1/136 (0%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
M CVFCAI+AGE+P+ R+YED LA LDIRP TRGHTLV+PK H DLTD P+ A +
Sbjct 1 MSCVFCAIVAGESPSFRVYEDETTLAFLDIRPITRGHTLVIPKAHAQDLTDLKPDDAAAI 60
Query 61 VAIGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLR 119
+ +GQRIA A R ++L +D T++A+NDGR AFQTV H HLHV+P R GDKL+ AKG M+R
Sbjct 61 MTVGQRIANAMRGSELQSDGTNLALNDGRVAFQTVMHAHLHVVPRRGGDKLAFAKGFMVR 120
Query 120 RDPDREATGRILREAL 135
RDPD EAT +I+R A+
Sbjct 121 RDPDLEATAQIIRAAV 136
>gi|343924707|ref|ZP_08764249.1| putative HIT family protein [Gordonia alkanivorans NBRC 16433]
gi|343765387|dbj|GAA11175.1| putative HIT family protein [Gordonia alkanivorans NBRC 16433]
Length=141
Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/134 (53%), Positives = 93/134 (70%), Gaps = 1/134 (0%)
Query 3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVA 62
C+FCAIIAG AP +Y D + LDIRP TRGHTL++P+ H+ L D P A + A
Sbjct 4 CIFCAIIAGTAPGRIVYSDDDVVGFLDIRPVTRGHTLLVPRVHSSGLDDLDPTLGAALFA 63
Query 63 IGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRRD 121
GQR+ A +A + AD ++A+NDGRAAFQTVFH HLHV+P GDKLS AKG+++RRD
Sbjct 64 AGQRVGSALKAGPMSADGVNLALNDGRAAFQTVFHTHLHVVPRHAGDKLSFAKGLVVRRD 123
Query 122 PDREATGRILREAL 135
PD + T ++R +L
Sbjct 124 PDPDETADLVRASL 137
>gi|289761414|ref|ZP_06520792.1| hypothetical hit-like protein [Mycobacterium tuberculosis GM
1503]
gi|289708920|gb|EFD72936.1| hypothetical hit-like protein [Mycobacterium tuberculosis GM
1503]
Length=146
Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/137 (68%), Positives = 96/137 (71%), Gaps = 6/137 (4%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGH--TLVLPKRHTVDLTDTPP--EA 56
MPCVFCAIIA EAPAI I+E G D R R T LP+ T L P +
Sbjct 1 MPCVFCAIIAREAPAIPIFE--GRRVSCDSRHPRRSTAGTRRLPRPATHRLPHPAPRRKP 58
Query 57 LADMVAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGM 116
VA RAARA KLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGM
Sbjct 59 WLTHVASANASRRAARAPKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGM 118
Query 117 MLRRDPDREATGRILRE 133
MLRRDPDREATGRILRE
Sbjct 119 MLRRDPDREATGRILRE 135
>gi|262201931|ref|YP_003273139.1| histidine triad (HIT) protein [Gordonia bronchialis DSM 43247]
gi|262085278|gb|ACY21246.1| histidine triad (HIT) protein [Gordonia bronchialis DSM 43247]
Length=140
Score = 140 bits (352), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 70/120 (59%), Positives = 86/120 (72%), Gaps = 1/120 (0%)
Query 3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVA 62
CVFCAI+AG +PA IY D L LDIRP TRGHTL++P+ H+ L D P + +
Sbjct 4 CVFCAIVAGTSPARIIYSDDDVLGFLDIRPITRGHTLLVPRVHSTGLADLDPALGSALFH 63
Query 63 IGQRIARAARATKLA-DATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRRD 121
GQRIA A R+ LA D ++A+NDGRAAFQTVFH HLHV+P +GDKLS AKG++LRRD
Sbjct 64 AGQRIAAAMRSGSLAADGVNLALNDGRAAFQTVFHTHLHVIPRHDGDKLSFAKGLILRRD 123
>gi|317508536|ref|ZP_07966201.1| HIT domain-containing protein [Segniliparus rugosus ATCC BAA-974]
gi|316253162|gb|EFV12567.1| HIT domain-containing protein [Segniliparus rugosus ATCC BAA-974]
Length=149
Score = 139 bits (351), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 74/136 (55%), Positives = 91/136 (67%), Gaps = 3/136 (2%)
Query 3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVA 62
CVFCAI+AG PA R+YED +A LDIRP +RGHTLV+PK H+ L D PE A +
Sbjct 10 CVFCAIVAGVGPAYRVYEDDDVVAFLDIRPVSRGHTLVIPKPHSPYLEDLDPENGAKIFK 69
Query 63 IGQRIARAARATKLADA-THIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVA--KGMMLR 119
+GQRIARA R + L A H+ +NDGRAA QTVFH HLHV+P R GDK+S+ G + R
Sbjct 70 VGQRIARAIRRSDLGVAGAHLVVNDGRAAMQTVFHTHLHVIPRRKGDKVSLPFLFGAVWR 129
Query 120 RDPDREATGRILREAL 135
+ D E T +RE L
Sbjct 130 KLVDPERTAEAIREGL 145
>gi|326385280|ref|ZP_08206942.1| histidine triad (HIT) protein [Gordonia neofelifaecis NRRL B-59395]
gi|326195989|gb|EGD53201.1| histidine triad (HIT) protein [Gordonia neofelifaecis NRRL B-59395]
Length=141
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/137 (50%), Positives = 91/137 (67%), Gaps = 1/137 (0%)
Query 3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVA 62
CVFC I++G +PA +Y D +A LD+ P TRGHTLV+P++H+ L D PE +
Sbjct 4 CVFCGIVSGASPAHVVYSDDDVIAFLDLSPITRGHTLVVPRQHSSGLADLDPEIGGKVFG 63
Query 63 IGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRRD 121
GQRIA A R++ + AD ++A+NDGRAA QT+FH LHV+P GDKLS AKG + RR
Sbjct 64 AGQRIAGAMRSSAIGADGVNLAMNDGRAASQTIFHSRLHVVPRHAGDKLSFAKGFLTRRA 123
Query 122 PDREATGRILREALAQQ 138
D E+T +LR AL +
Sbjct 124 GDLESTAAVLRSALESR 140
>gi|296394253|ref|YP_003659137.1| histidine triad (HIT) protein [Segniliparus rotundus DSM 44985]
gi|296181400|gb|ADG98306.1| histidine triad (HIT) protein [Segniliparus rotundus DSM 44985]
Length=149
Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/136 (53%), Positives = 90/136 (67%), Gaps = 3/136 (2%)
Query 3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVA 62
CVFCAI+AG +PA R+YED +A LDIRP +RGHTLV+PK H++ L D P A +
Sbjct 10 CVFCAIVAGVSPAYRVYEDDDIVAFLDIRPVSRGHTLVIPKPHSLYLEDLDPGNGAKVFQ 69
Query 63 IGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVA--KGMMLR 119
QRIAR R + L A H+ +NDGRAA QTVFH HLHV+P R GDKLS++ G + R
Sbjct 70 AAQRIARGIRRSDLGAAGVHLVVNDGRAAMQTVFHTHLHVIPRRKGDKLSLSFLFGALWR 129
Query 120 RDPDREATGRILREAL 135
+ D E T +RE L
Sbjct 130 KLADPERTAEAIREGL 145
>gi|54022979|ref|YP_117221.1| hypothetical protein nfa10120 [Nocardia farcinica IFM 10152]
gi|54014487|dbj|BAD55857.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=150
Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/142 (53%), Positives = 88/142 (62%), Gaps = 1/142 (0%)
Query 3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVA 62
CVFC I+AG APA ++YED A LDIRP RGHTLV+PKRH L D PE A M
Sbjct 8 CVFCRIVAGAAPATKVYEDETLCAFLDIRPIARGHTLVIPKRHAAGLPDLDPELGAAMFR 67
Query 63 IGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRRD 121
RIA A R L AD ++ +NDGRAAFQTV HVHLHV+P R+GD++ A G +LRR
Sbjct 68 AAHRIALAMRRGGLAADGANLVLNDGRAAFQTVGHVHLHVIPRRDGDRIRFATGFLLRRP 127
Query 122 PDREATGRILREALAQQDAAAQ 143
D AT +R L + Q
Sbjct 128 HDPGATAAAIRAGLTALEEGTQ 149
>gi|333920961|ref|YP_004494542.1| hypothetical protein AS9A_3300 [Amycolicicoccus subflavus DQS3-9A1]
gi|333483182|gb|AEF41742.1| hypothetical protein AS9A_3300 [Amycolicicoccus subflavus DQS3-9A1]
Length=147
Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/143 (47%), Positives = 93/143 (66%), Gaps = 2/143 (1%)
Query 3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVA 62
C+FC+I+AG PA +YED +A LDIRP RGHTLV+P+ H DL++ P + A + +
Sbjct 6 CIFCSIVAGSGPAHVVYEDENVVAFLDIRPIKRGHTLVIPRTHAQDLSELPQQLGAQVFS 65
Query 63 IGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRRD 121
Q IARA R ++ A+ +I INDG AAFQTV H H+HV+P R+GDK+ +A G++ RR
Sbjct 66 AAQIIARAVRDERIGAEGANIVINDGEAAFQTVPHTHIHVIPRRHGDKMRLAGGLLTRRA 125
Query 122 PDREATGRILREALAQQDAAAQD 144
T +LR A+ + A QD
Sbjct 126 SALPETAALLRAAI-NEAAGTQD 147
>gi|229494588|ref|ZP_04388351.1| histidine triad domain protein [Rhodococcus erythropolis SK121]
gi|229318950|gb|EEN84808.1| histidine triad domain protein [Rhodococcus erythropolis SK121]
Length=141
Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/135 (47%), Positives = 79/135 (59%), Gaps = 1/135 (0%)
Query 2 PCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMV 61
CVFC I+A PAI ++E LA LD RP +RGHTLV+PKRH +L A+M
Sbjct 5 SCVFCKIVALTEPAILVHESETTLAFLDARPVSRGHTLVVPKRHAENLDALESHEGAEMF 64
Query 62 AIGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRR 120
+G IA A R + AD + +NDGRAA QTVFH HLHV+P GDK A G++ RR
Sbjct 65 RVGTLIAGALRRCDIAADGVNFLVNDGRAAGQTVFHSHLHVVPRHRGDKAKFAAGLLARR 124
Query 121 DPDREATGRILREAL 135
+ E G +R L
Sbjct 125 AVELEQVGASIRSQL 139
>gi|226304155|ref|YP_002764113.1| HIT family protein [Rhodococcus erythropolis PR4]
gi|226183270|dbj|BAH31374.1| HIT family protein [Rhodococcus erythropolis PR4]
Length=141
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/134 (48%), Positives = 79/134 (59%), Gaps = 1/134 (0%)
Query 3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVA 62
CVFC I+A PAI ++E LA LD RP +RGHTLV+PKRH +L A+M
Sbjct 6 CVFCKIVALTEPAILVHESETTLAFLDARPVSRGHTLVVPKRHAENLDALESHEGAEMFR 65
Query 63 IGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRRD 121
+G IA A R + AD + +NDGRAA QTVFH HLHV+P GDK A G++ RR
Sbjct 66 VGTLIAGALRRCDIAADGVNFLVNDGRAAGQTVFHSHLHVVPRHRGDKAKFAAGLLARRA 125
Query 122 PDREATGRILREAL 135
+ E G +R L
Sbjct 126 VELEQVGASIRSQL 139
>gi|229494230|ref|ZP_04387993.1| histidine triad domain protein [Rhodococcus erythropolis SK121]
gi|229318592|gb|EEN84450.1| histidine triad domain protein [Rhodococcus erythropolis SK121]
Length=155
Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/139 (46%), Positives = 85/139 (62%), Gaps = 7/139 (5%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
M C+FC+IIAGEA A +Y+D LA +DIRPFT GH LV+PKRH L+ P+ A +
Sbjct 19 MDCIFCSIIAGEAEASVVYDDANVLAFMDIRPFTSGHLLVVPKRHASGLSTLDPDDGARI 78
Query 61 VAIGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLR 119
A+ Q+IA A R L D ++ ++DG A Q VFHVHLHV+P GD + L
Sbjct 79 FAVAQKIAAAMRTGPLPVDGVNLHLSDGAVAGQEVFHVHLHVIPRNRGDGFGLRA---LP 135
Query 120 RDPDR---EATGRILREAL 135
R P+R ++T ++R AL
Sbjct 136 RTPNRTILDSTAAVIRGAL 154
>gi|226304515|ref|YP_002764473.1| HIT family protein [Rhodococcus erythropolis PR4]
gi|226183630|dbj|BAH31734.1| HIT family protein [Rhodococcus erythropolis PR4]
Length=137
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/139 (44%), Positives = 84/139 (61%), Gaps = 7/139 (5%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
M C+FC+IIAGEA A +Y+D LA +DIRPFT GH LV+PKRH L+ + A +
Sbjct 1 MNCIFCSIIAGEAEASVVYDDANVLAFMDIRPFTSGHLLVVPKRHASGLSTLDSDDGARI 60
Query 61 VAIGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLR 119
++ Q+IA A R L D ++ ++DG A Q VFHVHLHV+P GD + L
Sbjct 61 FSVAQKIAAAMRTGPLPVDGVNLHLSDGAVAGQEVFHVHLHVIPRNRGDGFGLGA---LP 117
Query 120 RDPDR---EATGRILREAL 135
R P+R ++T ++R AL
Sbjct 118 RTPNRAVLDSTAAVIRGAL 136
>gi|291303639|ref|YP_003514917.1| histidine triad (HIT) protein [Stackebrandtia nassauensis DSM
44728]
gi|290572859|gb|ADD45824.1| histidine triad (HIT) protein [Stackebrandtia nassauensis DSM
44728]
Length=141
Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/136 (42%), Positives = 78/136 (58%), Gaps = 1/136 (0%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
+ CVFC+I+AG+AP+ ++ED LA +D+ P + GHTL++PK H L P + A +
Sbjct 4 VSCVFCSIVAGDAPSSVVHEDDVSLAFMDLAPVSDGHTLIVPKAHYAGLEALPEDIGAHL 63
Query 61 VAIGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLR 119
+ RI RA R T L + + + DG AA Q VFHVHLHV P GD V R
Sbjct 64 WTVAHRIGRAVRRTPLRCEGVSLTLADGEAAGQDVFHVHLHVFPRYPGDSYRVHADWRQR 123
Query 120 RDPDREATGRILREAL 135
PD +AT ++R AL
Sbjct 124 ERPDLDATAALVRAAL 139
>gi|332671276|ref|YP_004454284.1| histidine triad (HIT) protein [Cellulomonas fimi ATCC 484]
gi|332340314|gb|AEE46897.1| histidine triad (HIT) protein [Cellulomonas fimi ATCC 484]
Length=166
Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/134 (42%), Positives = 76/134 (57%), Gaps = 1/134 (0%)
Query 3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVA 62
C+FC ++AG + R+YED LA +DI+P T GH LV+PK H L D E A M
Sbjct 28 CIFCGVVAGTVESSRVYEDDAVLAFMDIQPVTNGHLLVIPKAHAASLEDLDEELGATMFR 87
Query 63 IGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRRD 121
G R+A A RA+ L D ++ + DG AAFQ VFHVHLHV P GD + +R
Sbjct 88 AGHRLAAALRASGLPCDGVNMFLADGEAAFQEVFHVHLHVFPRTPGDGFRIDADWRVRPR 147
Query 122 PDREATGRILREAL 135
+ + + ++R AL
Sbjct 148 AELDDSAALVRAAL 161
>gi|313672913|ref|YP_004051024.1| histidine triad (hit) protein [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939669|gb|ADR18861.1| histidine triad (HIT) protein [Calditerrivibrio nitroreducens
DSM 19672]
Length=137
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/125 (39%), Positives = 75/125 (60%), Gaps = 0/125 (0%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
M C+FC II+GE P+ ++YED +LAILDIRP GHTL++PK+H V++ DT + +
Sbjct 1 MDCIFCKIISGEIPSSKVYEDEDFLAILDIRPVNHGHTLLIPKKHFVNIFDTDDDIARKI 60
Query 61 VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRR 120
+ +I++ + LAD +I N+ + A Q VFH H+H++P D L + +
Sbjct 61 YPVLIKISKGIKEGLLADGINIIQNNEKYAGQEVFHSHIHIIPRFREDSLKFTPRNLSYK 120
Query 121 DPDRE 125
D D +
Sbjct 121 DEDEK 125
>gi|134103739|ref|YP_001109400.1| histidine triad (HIT) protein [Saccharopolyspora erythraea NRRL
2338]
gi|291007735|ref|ZP_06565708.1| histidine triad (HIT) protein [Saccharopolyspora erythraea NRRL
2338]
gi|133916362|emb|CAM06475.1| probable histidine triad (HIT) protein [Saccharopolyspora erythraea
NRRL 2338]
Length=154
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/141 (41%), Positives = 81/141 (58%), Gaps = 1/141 (0%)
Query 3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVA 62
CVFCAI+ G+A + +++D LA +D++P T GH LV+PK H V L D E + A
Sbjct 6 CVFCAIVRGDAESSVVHDDAEVLAFMDLQPVTPGHLLVVPKTHAVGLEDLDVEDGQKVWA 65
Query 63 IGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRRD 121
+G R++R R + L D ++ + DGRAA Q VFHVHLHV P GD ++ R
Sbjct 66 VGHRLSRVLRRSGLRCDGINLFLADGRAASQEVFHVHLHVFPRFAGDTFRISADWRERER 125
Query 122 PDREATGRILREALAQQDAAA 142
+ + T +LR+ LA A A
Sbjct 126 SELDETAAVLRKTLAALTAGA 146
>gi|226364289|ref|YP_002782071.1| HIT family protein [Rhodococcus opacus B4]
gi|226242778|dbj|BAH53126.1| HIT family protein [Rhodococcus opacus B4]
Length=137
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/139 (44%), Positives = 83/139 (60%), Gaps = 7/139 (5%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
M C+FC I++G + A ++ED LA +DIRP+T GH LV+PKRH L D P A +
Sbjct 1 MNCIFCEIVSGRSDASVVHEDENVLAFMDIRPWTSGHLLVVPKRHASGLADLDPGDGAAV 60
Query 61 VAIGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLR 119
A+GQRIA A R L A ++ + DG AA Q VFHVHLHV+P GD + +GM
Sbjct 61 FAVGQRIATALRHEPLRAQGVNLFLADGIAAGQEVFHVHLHVVPRTAGDGFGL-RGM--P 117
Query 120 RDPDR---EATGRILREAL 135
+ P R + T ++R +L
Sbjct 118 KSPSRIALDQTAGVIRSSL 136
>gi|312138260|ref|YP_004005596.1| hypothetical protein REQ_07960 [Rhodococcus equi 103S]
gi|325674833|ref|ZP_08154520.1| HIT family protein [Rhodococcus equi ATCC 33707]
gi|311887599|emb|CBH46911.1| conserved hypothetical protein [Rhodococcus equi 103S]
gi|325554419|gb|EGD24094.1| HIT family protein [Rhodococcus equi ATCC 33707]
Length=142
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/139 (44%), Positives = 79/139 (57%), Gaps = 1/139 (0%)
Query 3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVA 62
CVFCAI+AG+A + +YED A +DIRPFT GH LV+PK H L + PE A +
Sbjct 4 CVFCAIVAGKAESSLVYEDEHTTAFMDIRPFTPGHLLVVPKTHAAGLAELDPEDGARLFR 63
Query 63 IGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRRD 121
+GQRIA A RA+ + A+ + + DG A Q VFHVHLHV+P GD + +
Sbjct 64 VGQRIAGALRASTVGAEGVNFFLADGVVAGQEVFHVHLHVVPRTAGDGFGLRGRPTVPPR 123
Query 122 PDREATGRILREALAQQDA 140
PD + +R L DA
Sbjct 124 PDLDYLAGSIRGRLGAADA 142
>gi|111021759|ref|YP_704731.1| histidine triad (HIT) protein [Rhodococcus jostii RHA1]
gi|110821289|gb|ABG96573.1| probable histidine triad (HIT) protein [Rhodococcus jostii RHA1]
Length=137
Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/140 (43%), Positives = 84/140 (60%), Gaps = 7/140 (5%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
M C+FC I++G + A ++ED +A +DIRP+T GH LV+PKRH L D P A +
Sbjct 1 MNCIFCEIVSGRSDASVVHEDDDVMAFMDIRPWTSGHLLVVPKRHASGLADLDPGDGAAV 60
Query 61 VAIGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLR 119
A+GQRIA A R + A ++ + DG AA Q VFHVHLHV+P GD + +GM
Sbjct 61 FAVGQRIATALRHGPMRAQGVNLFLADGIAAGQEVFHVHLHVVPRTAGDGFGL-RGM--P 117
Query 120 RDPDR---EATGRILREALA 136
+ P R + T ++R +LA
Sbjct 118 KSPSRIALDQTAGVIRSSLA 137
>gi|255585620|ref|XP_002533497.1| histidine triad (hit) protein, putative [Ricinus communis]
gi|223526641|gb|EEF28884.1| histidine triad (hit) protein, putative [Ricinus communis]
Length=214
Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/121 (41%), Positives = 72/121 (60%), Gaps = 8/121 (6%)
Query 3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVA 62
CVFC II GE+PA ++YED L ILD P + GH+L++PK H L TPP +A M +
Sbjct 63 CVFCRIIRGESPAFKLYEDDTCLCILDTSPLSHGHSLIIPKSHYPSLEATPPSVVAAMCS 122
Query 63 ----IGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMML 118
IG I RA + D+ ++ +N+G AA Q +FH H+H++P + D L ++ +
Sbjct 123 KVPFIGNAIMRATGS----DSFNLLVNNGAAAGQVIFHTHIHIIPRKESDCLWTSESIQR 178
Query 119 R 119
R
Sbjct 179 R 179
>gi|223934199|ref|ZP_03626136.1| histidine triad (HIT) protein [Streptococcus suis 89/1591]
gi|302024454|ref|ZP_07249665.1| HIT-family protein [Streptococcus suis 05HAS68]
gi|330833479|ref|YP_004402304.1| histidine triad (HIT) protein [Streptococcus suis ST3]
gi|223897137|gb|EEF63561.1| histidine triad (HIT) protein [Streptococcus suis 89/1591]
gi|329307702|gb|AEB82118.1| histidine triad (HIT) protein [Streptococcus suis ST3]
Length=137
Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/132 (43%), Positives = 77/132 (59%), Gaps = 4/132 (3%)
Query 3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVA 62
C+FC II+GE PA ++YED LA LDI T+GHTLV+PK+H ++ D EA A + +
Sbjct 4 CIFCKIISGEIPASKVYEDDQVLAFLDITQATKGHTLVVPKKHYRNVLDMDKEAAATLFS 63
Query 63 IGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPP-RNGDKLSVAKGMMLRRD 121
+ IAR + A +I N+ AA QTVFH H+H+LP N D LS+ D
Sbjct 64 VVPTIARQLKEKLGASGLNIVNNNEEAAGQTVFHTHIHLLPRFNNQDGLSI---QFKAND 120
Query 122 PDREATGRILRE 133
PD A ++ +E
Sbjct 121 PDFPALAQLAQE 132
>gi|299532050|ref|ZP_07045445.1| histidine triad (HIT) protein [Comamonas testosteroni S44]
gi|298719965|gb|EFI60927.1| histidine triad (HIT) protein [Comamonas testosteroni S44]
Length=146
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/135 (42%), Positives = 74/135 (55%), Gaps = 3/135 (2%)
Query 3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVA 62
C+FC ++ GE P+ ++YED +A +DI TRGH LV KRH V+L + PE ++
Sbjct 13 CIFCKLVKGEIPSAKVYEDDLTIAFMDIGQATRGHVLVASKRHAVNLLELTPEEAGAVMQ 72
Query 63 IGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRRDP 122
QR+A A D +I +G A QTVFH HLHVLP GD LSV + R +P
Sbjct 73 TAQRVAAAVNKAFDPDGINIFQANGAPAGQTVFHFHLHVLPRFEGDGLSV---VWKREEP 129
Query 123 DREATGRILREALAQ 137
D A G + AQ
Sbjct 130 DFAALGELAERIKAQ 144
>gi|297792041|ref|XP_002863905.1| histidine triad family protein [Arabidopsis lyrata subsp. lyrata]
gi|297309740|gb|EFH40164.1| histidine triad family protein [Arabidopsis lyrata subsp. lyrata]
Length=198
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/133 (39%), Positives = 79/133 (60%), Gaps = 5/133 (3%)
Query 3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVA 62
CVFC II GE+P +++YED L ILD P + GH+L++PK H L +TPP +A M +
Sbjct 51 CVFCKIIRGESPCLKLYEDDMCLCILDTNPLSHGHSLIIPKLHYPTLEETPPSVVAAMCS 110
Query 63 IGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRRDP 122
I+ A +D+ ++ +N+G AA Q +FH H+H++P + D L ++ LRR
Sbjct 111 KVPLISNAIVKATGSDSFNLLVNNGAAAGQVIFHTHIHIIPRKERDCLWASES--LRRHT 168
Query 123 ---DREATGRILR 132
D+EA+ + R
Sbjct 169 LKLDKEASQLVSR 181
>gi|115487924|ref|NP_001066449.1| Os12g0233300 [Oryza sativa Japonica Group]
gi|77554082|gb|ABA96878.1| histidine triad family protein, putative, expressed [Oryza sativa
Japonica Group]
gi|108862373|gb|ABG21932.1| histidine triad family protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113648956|dbj|BAF29468.1| Os12g0233300 [Oryza sativa Japonica Group]
gi|125578908|gb|EAZ20054.1| hypothetical protein OsJ_35655 [Oryza sativa Japonica Group]
gi|215764961|dbj|BAG86658.1| unnamed protein product [Oryza sativa Japonica Group]
Length=225
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/108 (42%), Positives = 65/108 (61%), Gaps = 0/108 (0%)
Query 3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVA 62
CVFC I+ G PA ++YED L ILD +P + GH+L++PKRH L TPP +A +
Sbjct 73 CVFCEIVKGNKPAYKLYEDDVCLCILDTKPLSTGHSLIIPKRHFPSLQATPPSVIAAICC 132
Query 63 IGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKL 110
I+ A DA ++ +N+G+ A Q +FH H+H++P R GD L
Sbjct 133 KLPLISSAIVKATQCDAFNVLVNNGKVAGQVIFHTHVHLIPRRKGDNL 180
>gi|224069894|ref|XP_002303075.1| predicted protein [Populus trichocarpa]
gi|222844801|gb|EEE82348.1| predicted protein [Populus trichocarpa]
Length=190
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/140 (39%), Positives = 81/140 (58%), Gaps = 7/140 (5%)
Query 3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVA 62
CVFC I+ GE+PA ++YED L ILD P + GH+L++PK H L TPP +A M +
Sbjct 49 CVFCRIVRGESPAFKLYEDETCLCILDSSPLSPGHSLIIPKSHFSCLEATPPSVVAAMCS 108
Query 63 IGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRRDP 122
I A +D+ ++ +N+G AA Q +FH H+H++P + D L + LRR P
Sbjct 109 KVPSIGNAIMKANGSDSFNLLVNNGAAAGQVIFHTHIHIIPRKARDCLWTTES--LRRRP 166
Query 123 ---DREATGRI--LREALAQ 137
D+EA+ + +RE L+
Sbjct 167 LNFDQEASQLVNRVREQLSS 186
>gi|42573622|ref|NP_974907.1| protein histidine triad nucleotide-binding 3 [Arabidopsis thaliana]
gi|332008302|gb|AED95685.1| protein histidine triad nucleotide-binding 3 [Arabidopsis thaliana]
Length=197
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/128 (40%), Positives = 77/128 (61%), Gaps = 5/128 (3%)
Query 3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVA 62
CVFC II GE+P +++YED L ILD P + GH+L++PK H L +TPP +A M +
Sbjct 50 CVFCKIIRGESPCLKLYEDDMCLCILDTNPLSHGHSLIIPKLHYPTLEETPPSVVAAMCS 109
Query 63 IGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRRDP 122
I+ A +D+ ++ +N+G AA Q +FH H+H++P + D L ++ LRR
Sbjct 110 KVPLISNAIVKATGSDSFNLLVNNGAAAGQVIFHTHIHIIPRKERDCLWASES--LRRHS 167
Query 123 ---DREAT 127
D+EA+
Sbjct 168 LKLDKEAS 175
>gi|118488050|gb|ABK95845.1| unknown [Populus trichocarpa]
Length=197
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/142 (39%), Positives = 82/142 (58%), Gaps = 7/142 (4%)
Query 1 MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM 60
+ CVFC I+ GE+PA ++YED L ILD P + GH+L++PK H L TPP +A M
Sbjct 47 LDCVFCRIVRGESPAFKLYEDETCLCILDSSPLSPGHSLIIPKSHFSCLEATPPSVVAAM 106
Query 61 VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRR 120
+ I A +D+ ++ +N+G AA Q +FH H+H++P + D L + LRR
Sbjct 107 CSKVPSIGNAIMKANGSDSFNLLVNNGAAAGQVIFHTHIHIIPRKARDCLWTTES--LRR 164
Query 121 DP---DREATGRI--LREALAQ 137
P D+EA+ + +RE L+
Sbjct 165 RPLNFDQEASQLVNRVREQLSS 186
>gi|15921763|ref|NP_377432.1| histidine triad nucleotide-binding protein [Sulfolobus tokodaii
str. 7]
gi|15622550|dbj|BAB66541.1| hypothetical protein STK_14710 [Sulfolobus tokodaii str. 7]
Length=141
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/101 (43%), Positives = 65/101 (65%), Gaps = 1/101 (0%)
Query 3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVA 62
C+FC I+ GE + ++YED +A LDI P +GH LV+PK H ++ D P E L ++
Sbjct 6 CIFCKIVKGEIKSQKVYEDQEIMAFLDINPVNKGHVLVIPKDHYENIFDVPKEKLGKVIE 65
Query 63 IGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLP 103
+ Q++A A R AD +I N+G+AA Q +FH+H+HV+P
Sbjct 66 VVQKVAIALRKMG-ADGVNIVSNNGKAAEQHIFHLHIHVIP 105
>gi|125536180|gb|EAY82668.1| hypothetical protein OsI_37888 [Oryza sativa Indica Group]
Length=227
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/108 (41%), Positives = 65/108 (61%), Gaps = 0/108 (0%)
Query 3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVA 62
CVFC I+ G PA ++YED L ILD +P + GH+L++PKRH L TPP +A +
Sbjct 75 CVFCEIVKGNKPAYKLYEDDVCLCILDTKPLSTGHSLIIPKRHFPSLQATPPSVIAAICC 134
Query 63 IGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKL 110
++ A DA ++ +N+G+ A Q +FH H+H++P R GD L
Sbjct 135 KLPLLSSAIVKATQCDAFNVLVNNGKVAGQVIFHTHVHLIPRRKGDNL 182
>gi|225469892|ref|XP_002271191.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length=195
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/145 (35%), Positives = 81/145 (56%), Gaps = 3/145 (2%)
Query 3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVA 62
CVFC II G++PA+++YED L ILD P + GH+L++PK H L TPP +A M +
Sbjct 41 CVFCKIIRGQSPALKLYEDDMCLCILDTHPLSHGHSLIIPKSHFSSLEMTPPSVVAAMCS 100
Query 63 IGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGM---MLR 119
I+ A D+ ++ +N+G AA Q +FH H+H++P + D L ++ + L+
Sbjct 101 KVPFISNAIMKATGCDSFNLLVNNGAAAGQVIFHTHIHIIPRKARDCLWTSESLRRRTLK 160
Query 120 RDPDREATGRILREALAQQDAAAQD 144
D + +RE L+ + A +
Sbjct 161 LDQEASQLADRVREQLSFLNNAEES 185
Lambda K H
0.325 0.138 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128702269584
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40