BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1271c Length=113 Score E Sequences producing significant alignments: (Bits) Value gi|15840718|ref|NP_335755.1| hypothetical protein MT1309 [Mycoba... 223 7e-57 gi|15608411|ref|NP_215787.1| hypothetical protein Rv1271c [Mycob... 223 8e-57 gi|118619212|ref|YP_907544.1| hypothetical protein MUL_4013 [Myc... 142 2e-32 gi|183984122|ref|YP_001852413.1| hypothetical protein MMAR_4151 ... 124 3e-27 gi|118619213|ref|YP_907545.1| hypothetical protein MUL_4014 [Myc... 122 2e-26 gi|240173138|ref|ZP_04751796.1| hypothetical protein MkanA1_2774... 114 5e-24 gi|254774297|ref|ZP_05215813.1| hypothetical protein MaviaA2_064... 95.5 2e-18 gi|41408599|ref|NP_961435.1| hypothetical protein MAP2501 [Mycob... 95.5 3e-18 gi|336458546|gb|EGO37514.1| Protein of unknown function (DUF732)... 94.7 3e-18 gi|118462738|ref|YP_880661.1| hypothetical protein MAV_1419 [Myc... 92.4 2e-17 gi|254820682|ref|ZP_05225683.1| hypothetical protein MintA_12176... 74.7 5e-12 gi|342858084|ref|ZP_08714740.1| hypothetical protein MCOL_04380 ... 73.6 9e-12 gi|118618469|ref|YP_906801.1| hypothetical protein MUL_3086 [Myc... 72.4 2e-11 gi|167969616|ref|ZP_02551893.1| conserved hypothetical secreted ... 72.0 3e-11 gi|15608431|ref|NP_215807.1| hypothetical protein Rv1291c [Mycob... 71.6 4e-11 gi|289745037|ref|ZP_06504415.1| hypothetical protein TBBG_02183 ... 71.2 5e-11 gi|336459617|gb|EGO38552.1| Protein of unknown function (DUF732)... 70.1 1e-10 gi|41409516|ref|NP_962352.1| hypothetical protein MAP3418 [Mycob... 69.7 1e-10 gi|289753368|ref|ZP_06512746.1| conserved hypothetical protein [... 69.7 1e-10 gi|118466072|ref|YP_883411.1| hypothetical protein MAV_4271 [Myc... 69.3 2e-10 gi|183981255|ref|YP_001849546.1| hypothetical protein MMAR_1233 ... 66.2 1e-09 gi|118618122|ref|YP_906454.1| hypothetical protein MUL_2657 [Myc... 65.9 2e-09 gi|240171347|ref|ZP_04750006.1| hypothetical protein MkanA1_1869... 65.1 3e-09 gi|342861513|ref|ZP_08718160.1| hypothetical protein MCOL_21611 ... 64.3 5e-09 gi|296164795|ref|ZP_06847355.1| conserved hypothetical protein [... 63.5 9e-09 gi|296168904|ref|ZP_06850573.1| conserved hypothetical protein [... 63.2 1e-08 gi|254231549|ref|ZP_04924876.1| conserved hypothetical secreted ... 62.4 2e-08 gi|296169915|ref|ZP_06851526.1| conserved hypothetical protein [... 62.4 2e-08 gi|254823259|ref|ZP_05228260.1| hypothetical protein MintA_25239... 62.0 3e-08 gi|240169525|ref|ZP_04748184.1| hypothetical secreted protein [M... 61.6 4e-08 gi|342861289|ref|ZP_08717937.1| hypothetical protein MCOL_20496 ... 61.2 4e-08 gi|118463814|ref|YP_882093.1| hypothetical protein MAV_2907 [Myc... 58.9 3e-07 gi|111026930|ref|YP_708908.1| hypothetical protein RHA1_ro11103 ... 58.5 3e-07 gi|183984092|ref|YP_001852383.1| hypothetical protein MMAR_4121 ... 58.5 3e-07 gi|118619190|ref|YP_907522.1| hypothetical protein MUL_3987 [Myc... 58.5 3e-07 gi|41407621|ref|NP_960457.1| hypothetical protein MAP1523 [Mycob... 57.8 5e-07 gi|296166615|ref|ZP_06849043.1| conserved hypothetical protein [... 57.4 7e-07 gi|296166911|ref|ZP_06849328.1| conserved hypothetical protein [... 57.4 7e-07 gi|240169301|ref|ZP_04747960.1| hypothetical protein MkanA1_0830... 56.6 1e-06 gi|118618176|ref|YP_906508.1| hypothetical protein MUL_2724 [Myc... 55.8 2e-06 gi|118466065|ref|YP_882736.1| hypothetical protein MAV_3558 [Myc... 55.1 3e-06 gi|240173096|ref|ZP_04751754.1| hypothetical protein MkanA1_2753... 54.7 4e-06 gi|254775379|ref|ZP_05216895.1| hypothetical protein MaviaA2_120... 54.7 4e-06 gi|339783968|gb|AEK09679.1| gp65 [Mycobacterium phage Mozy] 54.7 4e-06 gi|157311245|ref|YP_001469289.1| gp56 [Mycobacterium phage Tweet... 54.7 5e-06 gi|339780929|gb|AEK06765.1| gp57 [Mycobacterium phage RockyHorror] 54.7 5e-06 gi|339783437|gb|AEK09152.1| gp56 [Mycobacterium phage Ibhubesi] 54.7 5e-06 gi|109522137|ref|YP_655814.1| gp53 [Mycobacterium phage PMC] >gi... 54.3 5e-06 gi|120405667|ref|YP_955496.1| hypothetical protein Mvan_4716 [My... 54.3 6e-06 gi|339753214|gb|AEJ93240.1| gp55 [Mycobacterium phage ShiLan] 54.3 6e-06 >gi|15840718|ref|NP_335755.1| hypothetical protein MT1309 [Mycobacterium tuberculosis CDC1551] gi|13880908|gb|AAK45569.1| hypothetical protein MT1309 [Mycobacterium tuberculosis CDC1551] Length=115 Score = 223 bits (568), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 113/113 (100%), Positives = 113/113 (100%), Gaps = 0/113 (0%) Query 1 MLSPLSPRIIAAFTTAVGAAAIGLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQ 60 MLSPLSPRIIAAFTTAVGAAAIGLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQ Sbjct 3 MLSPLSPRIIAAFTTAVGAAAIGLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQ 62 Query 61 QAQLVCKKLASGETGTEIAEEVLSQTNLTTKQAAYFVVDATKAYCPQYASQLT 113 QAQLVCKKLASGETGTEIAEEVLSQTNLTTKQAAYFVVDATKAYCPQYASQLT Sbjct 63 QAQLVCKKLASGETGTEIAEEVLSQTNLTTKQAAYFVVDATKAYCPQYASQLT 115 >gi|15608411|ref|NP_215787.1| hypothetical protein Rv1271c [Mycobacterium tuberculosis H37Rv] gi|31792463|ref|NP_854956.1| hypothetical protein Mb1302c [Mycobacterium bovis AF2122/97] gi|121637199|ref|YP_977422.1| hypothetical protein BCG_1330c [Mycobacterium bovis BCG str. Pasteur 1173P2] 80 more sequence titles Length=113 Score = 223 bits (568), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 113/113 (100%), Positives = 113/113 (100%), Gaps = 0/113 (0%) Query 1 MLSPLSPRIIAAFTTAVGAAAIGLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQ 60 MLSPLSPRIIAAFTTAVGAAAIGLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQ Sbjct 1 MLSPLSPRIIAAFTTAVGAAAIGLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQ 60 Query 61 QAQLVCKKLASGETGTEIAEEVLSQTNLTTKQAAYFVVDATKAYCPQYASQLT 113 QAQLVCKKLASGETGTEIAEEVLSQTNLTTKQAAYFVVDATKAYCPQYASQLT Sbjct 61 QAQLVCKKLASGETGTEIAEEVLSQTNLTTKQAAYFVVDATKAYCPQYASQLT 113 >gi|118619212|ref|YP_907544.1| hypothetical protein MUL_4013 [Mycobacterium ulcerans Agy99] gi|183984121|ref|YP_001852412.1| hypothetical protein MMAR_4150 [Mycobacterium marinum M] gi|118571322|gb|ABL06073.1| conserved hypothetical secreted rotein [Mycobacterium ulcerans Agy99] gi|183177447|gb|ACC42557.1| conserved hypothetical secreted rotein [Mycobacterium marinum M] Length=110 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 78/108 (73%), Positives = 94/108 (88%), Gaps = 0/108 (0%) Query 5 LSPRIIAAFTTAVGAAAIGLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQAQL 64 S RI AA TTA+GAAA+GLA+ATAG+A A+T D AFI+QMES+GVTFSSPQ A ++ Sbjct 2 FSTRITAAVTTAIGAAAVGLAIATAGSAAASTDDTAFISQMESVGVTFSSPQAADREGHQ 61 Query 65 VCKKLASGETGTEIAEEVLSQTNLTTKQAAYFVVDATKAYCPQYASQL 112 VC++LASG+TGT+IAEE+LSQT+LT+KQAAYFVV ATK YCPQYASQL Sbjct 62 VCQELASGKTGTDIAEEILSQTDLTSKQAAYFVVYATKDYCPQYASQL 109 >gi|183984122|ref|YP_001852413.1| hypothetical protein MMAR_4151 [Mycobacterium marinum M] gi|183177448|gb|ACC42558.1| conserved hypothetical secreted protein [Mycobacterium marinum M] Length=110 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 59/79 (75%), Positives = 69/79 (88%), Gaps = 0/79 (0%) Query 35 NTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEVLSQTNLTTKQAA 94 +T DE FIAQM+ +GVTFSS Q A +Q VC++LASG+TGT+IAEE+LSQTNLTTKQAA Sbjct 32 STGDETFIAQMKGVGVTFSSTQSAVRQGHQVCQELASGKTGTDIAEEILSQTNLTTKQAA 91 Query 95 YFVVDATKAYCPQYASQLT 113 YFVVDATK YCP+YASQLT Sbjct 92 YFVVDATKVYCPEYASQLT 110 >gi|118619213|ref|YP_907545.1| hypothetical protein MUL_4014 [Mycobacterium ulcerans Agy99] gi|118571323|gb|ABL06074.1| conserved hypothetical secreted protein [Mycobacterium ulcerans Agy99] Length=110 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 58/79 (74%), Positives = 68/79 (87%), Gaps = 0/79 (0%) Query 35 NTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEVLSQTNLTTKQAA 94 +T DE FIAQM+ +GVTFSS Q A +Q VC++ ASG+TGT+IAEE+LSQTNLTTKQAA Sbjct 32 STGDETFIAQMKGVGVTFSSTQSAVRQGHQVCQESASGKTGTDIAEEILSQTNLTTKQAA 91 Query 95 YFVVDATKAYCPQYASQLT 113 YFVVDATK YCP+YASQLT Sbjct 92 YFVVDATKVYCPEYASQLT 110 >gi|240173138|ref|ZP_04751796.1| hypothetical protein MkanA1_27746 [Mycobacterium kansasii ATCC 12478] Length=111 Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 54/73 (74%), Positives = 63/73 (87%), Gaps = 0/73 (0%) Query 41 FIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEVLSQTNLTTKQAAYFVVDA 100 FI+QMES+GVTFSSPQ A Q+ VC +LA+G TG++IA E+LSQTNLT+KQAAYFVV A Sbjct 39 FISQMESVGVTFSSPQAAVQEGHQVCTELAAGATGSQIASEILSQTNLTSKQAAYFVVYA 98 Query 101 TKAYCPQYASQLT 113 TK YCPQYASQLT Sbjct 99 TKDYCPQYASQLT 111 >gi|254774297|ref|ZP_05215813.1| hypothetical protein MaviaA2_06470 [Mycobacterium avium subsp. avium ATCC 25291] Length=111 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/109 (50%), Positives = 69/109 (64%), Gaps = 3/109 (2%) Query 5 LSPRIIAAFTTA--VGAAAIGLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQA 62 S RII TTA +G AA+GLA A A T DE F+AQM S+GV+F SPQ A ++ Sbjct 2 FSRRIITVLTTAAAIGLAAVGLAGPAAARA-VQTGDEMFLAQMRSLGVSFPSPQEAVREG 60 Query 63 QLVCKKLASGETGTEIAEEVLSQTNLTTKQAAYFVVDATKAYCPQYASQ 111 VC +L++G+T T + V QTNLT QAA V AT+AYCPQ++ Q Sbjct 61 HQVCAELSAGKTPTAVTVAVFRQTNLTPPQAAGLVTAATQAYCPQFSGQ 109 >gi|41408599|ref|NP_961435.1| hypothetical protein MAP2501 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396957|gb|AAS04818.1| hypothetical protein MAP_2501 [Mycobacterium avium subsp. paratuberculosis K-10] Length=114 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 58/115 (51%), Positives = 72/115 (63%), Gaps = 7/115 (6%) Query 1 MLSPLSPRIIAAFTTAVGAAAIGLA-VATAGTAGANT---KDEAFIAQMESIGVTFSSPQ 56 M + S RII TTA AAIGLA V AG A A T DE F+AQM S+GV+F SPQ Sbjct 1 MATMFSRRIITVLTTA---AAIGLAAVGLAGPAAARTVQTGDEMFLAQMRSLGVSFPSPQ 57 Query 57 VATQQAQLVCKKLASGETGTEIAEEVLSQTNLTTKQAAYFVVDATKAYCPQYASQ 111 A ++ VC +L++G+T T + V QTNLT QAA V AT+AYCPQ++ Q Sbjct 58 EAVREGHQVCAELSAGKTPTAVTVAVFRQTNLTPPQAAGLVTAATQAYCPQFSGQ 112 >gi|336458546|gb|EGO37514.1| Protein of unknown function (DUF732) [Mycobacterium avium subsp. paratuberculosis S397] Length=110 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/111 (52%), Positives = 70/111 (64%), Gaps = 7/111 (6%) Query 5 LSPRIIAAFTTAVGAAAIGLA-VATAGTAGANT---KDEAFIAQMESIGVTFSSPQVATQ 60 S RII TTA AAIGLA V AG A A T DE F+AQM S+GV+F SPQ A + Sbjct 2 FSRRIITVLTTA---AAIGLAAVGLAGPAAARTVQTGDEMFLAQMRSLGVSFPSPQEAVR 58 Query 61 QAQLVCKKLASGETGTEIAEEVLSQTNLTTKQAAYFVVDATKAYCPQYASQ 111 + VC +L++G+T T + V QTNLT QAA V AT+AYCPQ++ Q Sbjct 59 EGHQVCAELSAGKTPTAVTVAVFRQTNLTPPQAAGLVTAATQAYCPQFSGQ 109 >gi|118462738|ref|YP_880661.1| hypothetical protein MAV_1419 [Mycobacterium avium 104] gi|118164025|gb|ABK64922.1| conserved hypothetical protein [Mycobacterium avium 104] Length=110 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 52/108 (49%), Positives = 67/108 (63%), Gaps = 2/108 (1%) Query 5 LSPRIIAAFTTA-VGAAAIGLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQAQ 63 S RII TA +G AA+GLA A T DE F+AQM S+GV+F SPQ A ++ Sbjct 2 FSRRIITVLITAAIGLAAVGLA-GPAAARTVQTGDEMFLAQMRSLGVSFPSPQEAVREGH 60 Query 64 LVCKKLASGETGTEIAEEVLSQTNLTTKQAAYFVVDATKAYCPQYASQ 111 VC +L++G+T T + V QTNLT QAA V AT+AYCPQ++ Q Sbjct 61 QVCAELSAGKTPTAVTVAVFRQTNLTPPQAAGLVTAATQAYCPQFSGQ 108 >gi|254820682|ref|ZP_05225683.1| hypothetical protein MintA_12176 [Mycobacterium intracellulare ATCC 13950] Length=119 Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 38/97 (40%), Positives = 59/97 (61%), Gaps = 3/97 (3%) Query 16 AVGAAAI-GL--AVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASG 72 A+GA + GL A+ +A A + D+AF+A +++ G+ F SP+ VC +L SG Sbjct 17 AIGAVPVAGLLSAMTAPASAHATSADDAFLAALKAKGINFESPEAVVNSGHTVCHELDSG 76 Query 73 ETGTEIAEEVLSQTNLTTKQAAYFVVDATKAYCPQYA 109 +T ++A VLS ++L + A YFV + KAYCP+YA Sbjct 77 QTPEQVANNVLSSSSLDSYHAGYFVGVSIKAYCPKYA 113 >gi|342858084|ref|ZP_08714740.1| hypothetical protein MCOL_04380 [Mycobacterium colombiense CECT 3035] gi|342135417|gb|EGT88583.1| hypothetical protein MCOL_04380 [Mycobacterium colombiense CECT 3035] Length=114 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 40/89 (45%), Positives = 56/89 (63%), Gaps = 3/89 (3%) Query 26 VATAGTAGAN---TKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEV 82 V AGTA A+ T D+AF++QM+S+GVTF S Q A + VC L++G+T + ++ Sbjct 24 VGMAGTAAASSVQTADQAFLSQMQSLGVTFPSTQDAVRAGHQVCTDLSAGQTPIAVTVQI 83 Query 83 LSQTNLTTKQAAYFVVDATKAYCPQYASQ 111 T+LT QAA V AT AYCPQ++ Q Sbjct 84 FRHTHLTPPQAAGVVNAATIAYCPQFSGQ 112 >gi|118618469|ref|YP_906801.1| hypothetical protein MUL_3086 [Mycobacterium ulcerans Agy99] gi|183982679|ref|YP_001850970.1| hypothetical protein MMAR_2672 [Mycobacterium marinum M] gi|118570579|gb|ABL05330.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] gi|183176005|gb|ACC41115.1| conserved hypothetical protein [Mycobacterium marinum M] Length=106 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/87 (41%), Positives = 54/87 (63%), Gaps = 1/87 (1%) Query 26 VATAGTAGANTKDEAFIAQMESIGVT-FSSPQVATQQAQLVCKKLASGETGTEIAEEVLS 84 + T TA A+ D+ F+++++S G+T SP A A +VC+KL SG T TE+A +VL+ Sbjct 16 LGTVATAHADNNDDRFLSELQSEGITDHISPSHAILAAHIVCQKLDSGMTPTEVAYDVLN 75 Query 85 QTNLTTKQAAYFVVDATKAYCPQYASQ 111 +++ + YFV A AYCPQY + Sbjct 76 SSSMPGYHSGYFVGAAIDAYCPQYRPE 102 >gi|167969616|ref|ZP_02551893.1| conserved hypothetical secreted protein [Mycobacterium tuberculosis H37Ra] Length=168 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/95 (44%), Positives = 56/95 (59%), Gaps = 1/95 (1%) Query 15 TAVGAAAIGLA-VATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGE 73 T + AA +GLA + AGTA A++ DEAF+AQ+++ G+T S A + A VC L G Sbjct 13 TTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGH 72 Query 74 TGTEIAEEVLSQTNLTTKQAAYFVVDATKAYCPQY 108 + + + V T L+ K A F VDA AYCPQY Sbjct 73 SAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQY 107 >gi|15608431|ref|NP_215807.1| hypothetical protein Rv1291c [Mycobacterium tuberculosis H37Rv] gi|31792484|ref|NP_854977.1| hypothetical protein Mb1323c [Mycobacterium bovis AF2122/97] gi|121637220|ref|YP_977443.1| hypothetical protein BCG_1351c [Mycobacterium bovis BCG str. Pasteur 1173P2] 71 more sequence titles Length=111 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/95 (44%), Positives = 56/95 (59%), Gaps = 1/95 (1%) Query 15 TAVGAAAIGLA-VATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGE 73 T + AA +GLA + AGTA A++ DEAF+AQ+++ G+T S A + A VC L G Sbjct 13 TTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGH 72 Query 74 TGTEIAEEVLSQTNLTTKQAAYFVVDATKAYCPQY 108 + + + V T L+ K A F VDA AYCPQY Sbjct 73 SAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQY 107 >gi|289745037|ref|ZP_06504415.1| hypothetical protein TBBG_02183 [Mycobacterium tuberculosis 02_1987] gi|289757391|ref|ZP_06516769.1| hypothetical protein TBEG_03838 [Mycobacterium tuberculosis T85] gi|289685565|gb|EFD53053.1| hypothetical protein TBBG_02183 [Mycobacterium tuberculosis 02_1987] gi|289712955|gb|EFD76967.1| hypothetical protein TBEG_03838 [Mycobacterium tuberculosis T85] Length=162 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 41/95 (44%), Positives = 56/95 (59%), Gaps = 1/95 (1%) Query 15 TAVGAAAIGLA-VATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGE 73 T + AA +GLA + AGTA A++ DEAF+AQ+++ G+T S A + A VC L G Sbjct 64 TTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGH 123 Query 74 TGTEIAEEVLSQTNLTTKQAAYFVVDATKAYCPQY 108 + + + V T L+ K A F VDA AYCPQY Sbjct 124 SAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQY 158 >gi|336459617|gb|EGO38552.1| Protein of unknown function (DUF732) [Mycobacterium avium subsp. paratuberculosis S397] Length=117 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 31/78 (40%), Positives = 47/78 (61%), Gaps = 0/78 (0%) Query 32 AGANTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEVLSQTNLTTK 91 A A + D+AF+A +++ G+ + SP A VC +L G+T ++A VLS + L + Sbjct 34 AHATSADDAFLAALKAKGINYESPDAAVNSGHTVCHELDMGQTPEQVANNVLSSSTLDSY 93 Query 92 QAAYFVVDATKAYCPQYA 109 A YFV + KAYCP+YA Sbjct 94 HAGYFVGVSIKAYCPKYA 111 >gi|41409516|ref|NP_962352.1| hypothetical protein MAP3418 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398347|gb|AAS05968.1| hypothetical protein MAP_3418 [Mycobacterium avium subsp. paratuberculosis K-10] Length=149 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 31/78 (40%), Positives = 47/78 (61%), Gaps = 0/78 (0%) Query 32 AGANTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEVLSQTNLTTK 91 A A + D+AF+A +++ G+ + SP A VC +L G+T ++A VLS + L + Sbjct 66 AHATSADDAFLAALKAKGINYESPDAAVNSGHTVCHELDMGQTPEQVANNVLSSSTLDSY 125 Query 92 QAAYFVVDATKAYCPQYA 109 A YFV + KAYCP+YA Sbjct 126 HAGYFVGVSIKAYCPKYA 143 >gi|289753368|ref|ZP_06512746.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289693955|gb|EFD61384.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length=111 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/95 (43%), Positives = 55/95 (58%), Gaps = 1/95 (1%) Query 15 TAVGAAAIGLA-VATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGE 73 T + AA +GLA + AGTA A++ DEAF+AQ+++ G+T A + A VC L G Sbjct 13 TTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPRAARAIKDAHAVCDALDEGH 72 Query 74 TGTEIAEEVLSQTNLTTKQAAYFVVDATKAYCPQY 108 + + + V T L+ K A F VDA AYCPQY Sbjct 73 SAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQY 107 >gi|118466072|ref|YP_883411.1| hypothetical protein MAV_4271 [Mycobacterium avium 104] gi|254776706|ref|ZP_05218222.1| hypothetical protein MaviaA2_18846 [Mycobacterium avium subsp. avium ATCC 25291] gi|118167359|gb|ABK68256.1| conserved hypothetical protein [Mycobacterium avium 104] Length=117 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 31/78 (40%), Positives = 47/78 (61%), Gaps = 0/78 (0%) Query 32 AGANTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEVLSQTNLTTK 91 A A + D+AF+A +++ G+ + SP A VC +L G+T ++A VLS + L + Sbjct 34 AYATSADDAFLAALKAKGINYESPDAAVNSGHTVCHELDMGQTPEQVANNVLSSSTLDSY 93 Query 92 QAAYFVVDATKAYCPQYA 109 A YFV + KAYCP+YA Sbjct 94 HAGYFVGVSIKAYCPKYA 111 >gi|183981255|ref|YP_001849546.1| hypothetical protein MMAR_1233 [Mycobacterium marinum M] gi|183174581|gb|ACC39691.1| conserved hypothetical secreted protein [Mycobacterium marinum M] Length=106 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/81 (39%), Positives = 48/81 (60%), Gaps = 0/81 (0%) Query 31 TAGANTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEVLSQTNLTT 90 TA A+ D+AF+ + S G+ F+SPQ A VC L SG +++A +V + ++L Sbjct 25 TAHADAVDDAFLNAVRSHGINFASPQAAIMAGHQVCNALDSGRQKSDVAGDVAASSSLDG 84 Query 91 KQAAYFVVDATKAYCPQYASQ 111 +A YFV + AYCP++ SQ Sbjct 85 YRAGYFVGVSIAAYCPRHHSQ 105 >gi|118618122|ref|YP_906454.1| hypothetical protein MUL_2657 [Mycobacterium ulcerans Agy99] gi|118570232|gb|ABL04983.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=167 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/86 (40%), Positives = 52/86 (61%), Gaps = 1/86 (1%) Query 26 VATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEVLSQ 85 +ATA TA A+ D+AF+ + S G+ F+SPQ A VC L SG +++A +V + Sbjct 82 LATA-TAHADAVDDAFLNAVRSHGINFASPQAAIMAGHQVCNALDSGRQKSDVAGDVAAS 140 Query 86 TNLTTKQAAYFVVDATKAYCPQYASQ 111 ++L +A YFV + AYCP++ SQ Sbjct 141 SSLDGYRAGYFVGVSIAAYCPRHHSQ 166 >gi|240171347|ref|ZP_04750006.1| hypothetical protein MkanA1_18691 [Mycobacterium kansasii ATCC 12478] Length=118 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/87 (37%), Positives = 49/87 (57%), Gaps = 0/87 (0%) Query 22 IGLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEE 81 +GLAV TA A+ D+AF+ +++ G+ F+SPQ A VC +L G +IA + Sbjct 27 LGLAVVAIPTAKADGIDDAFLNAVKAKGINFASPQAAILVGHQVCDELDLGRHKADIAND 86 Query 82 VLSQTNLTTKQAAYFVVDATKAYCPQY 108 + NL +A YFV + AYCP++ Sbjct 87 LAKGGNLDGYRAGYFVGLSVAAYCPRH 113 >gi|342861513|ref|ZP_08718160.1| hypothetical protein MCOL_21611 [Mycobacterium colombiense CECT 3035] gi|342131002|gb|EGT84291.1| hypothetical protein MCOL_21611 [Mycobacterium colombiense CECT 3035] Length=120 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 28/73 (39%), Positives = 43/73 (59%), Gaps = 0/73 (0%) Query 38 DEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEVLSQTNLTTKQAAYFV 97 D+AF+A +++ G+ + S A VC +L G+T ++A VLS + L + A YFV Sbjct 41 DDAFLAALKAKGINYESADAAVNSGHTVCHELDMGQTPEQVANSVLSSSTLDSYHAGYFV 100 Query 98 VDATKAYCPQYAS 110 + KAYCP+YA Sbjct 101 GVSIKAYCPKYAD 113 >gi|296164795|ref|ZP_06847355.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899849|gb|EFG79295.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=105 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 32/89 (36%), Positives = 48/89 (54%), Gaps = 1/89 (1%) Query 20 AAIGLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIA 79 A IGLA G + +F+A + S G+T+ +P A Q A+ VC+ + +GE G ++ Sbjct 12 AVIGLAAPAHGDPDGGVDEASFLASLRSAGITYKTPDAAVQFAKAVCESMGNGEYGPQMV 71 Query 80 EEVLSQT-NLTTKQAAYFVVDATKAYCPQ 107 E+ +Q LT A F+ A K YCPQ Sbjct 72 SELQAQNPGLTADHATSFLAIAAKFYCPQ 100 >gi|296168904|ref|ZP_06850573.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896373|gb|EFG76026.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=153 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 25/71 (36%), Positives = 44/71 (62%), Gaps = 0/71 (0%) Query 41 FIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEVLSQTNLTTKQAAYFVVDA 100 F+A + + G+ + SP+ A + LVC +L SG ++A +V++ ++L A YFV + Sbjct 82 FLAALTAKGINYESPETAIRSGHLVCAQLDSGIAPQQVANDVMTNSHLDGYHAGYFVGVS 141 Query 101 TKAYCPQYASQ 111 +AYCP+Y+ Q Sbjct 142 IRAYCPKYSGQ 152 >gi|254231549|ref|ZP_04924876.1| conserved hypothetical secreted protein [Mycobacterium tuberculosis C] gi|124600608|gb|EAY59618.1| conserved hypothetical secreted protein [Mycobacterium tuberculosis C] Length=119 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/75 (42%), Positives = 43/75 (58%), Gaps = 0/75 (0%) Query 34 ANTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEVLSQTNLTTKQA 93 A++ DEAF+AQ+++ G+T S A + A VC L G + + + V T L+ K A Sbjct 41 ASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAKAVIKAVAKATGLSAKGA 100 Query 94 AYFVVDATKAYCPQY 108 F VDA AYCPQY Sbjct 101 KTFAVDAASAYCPQY 115 >gi|296169915|ref|ZP_06851526.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895427|gb|EFG75130.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=135 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/82 (36%), Positives = 45/82 (55%), Gaps = 0/82 (0%) Query 31 TAGANTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEVLSQTNLTT 90 TA A+ D+AFIA + + G+ +A VCK + + +A +V T+L+ Sbjct 40 TASADPADDAFIASLANYGIEVRDSGIAIAMGHRVCKGFDNNANASVLAMKVKRDTDLSM 99 Query 91 KQAAYFVVDATKAYCPQYASQL 112 K+A+YFV + AYCPQY Q+ Sbjct 100 KEASYFVGLSVAAYCPQYRGQI 121 >gi|254823259|ref|ZP_05228260.1| hypothetical protein MintA_25239 [Mycobacterium intracellulare ATCC 13950] Length=107 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/105 (38%), Positives = 59/105 (57%), Gaps = 9/105 (8%) Query 8 RIIAAFTTAVGAAAI----GLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQAQ 63 R++AA VG + I LA + GT G + + AF+A + G+T+S+P A + A+ Sbjct 2 RLLAAL--GVGVSVILGPTPLAHSDPGTTGGD--EAAFLASLRGAGITYSTPDGAVKFAK 57 Query 64 LVCKKLASGETGTEIAEEVLSQT-NLTTKQAAYFVVDATKAYCPQ 107 VC +A+GE G ++ +E+ SQ LT A F+ A K YCPQ Sbjct 58 AVCVSMANGELGPQMVDELKSQNPGLTDDHATSFLAIAAKFYCPQ 102 >gi|240169525|ref|ZP_04748184.1| hypothetical secreted protein [Mycobacterium kansasii ATCC 12478] Length=111 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 29/74 (40%), Positives = 42/74 (57%), Gaps = 0/74 (0%) Query 35 NTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEVLSQTNLTTKQAA 94 N+ D+AF+AQ+++ G+T + A +A VC L G + E+ V T L+ K A Sbjct 34 NSVDDAFLAQLKADGITPPTAARAISEAHAVCTALDEGHSAKEVINAVAESTGLSAKGAK 93 Query 95 YFVVDATKAYCPQY 108 F +DA AYCPQY Sbjct 94 TFAIDAASAYCPQY 107 >gi|342861289|ref|ZP_08717937.1| hypothetical protein MCOL_20496 [Mycobacterium colombiense CECT 3035] gi|342131189|gb|EGT84470.1| hypothetical protein MCOL_20496 [Mycobacterium colombiense CECT 3035] Length=108 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/90 (39%), Positives = 52/90 (58%), Gaps = 2/90 (2%) Query 20 AAIGLAVATAGTAGANTKDEA-FIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEI 78 AAIG+A G DEA F+A + S G+T+++P+ A A+ VC + GE G ++ Sbjct 14 AAIGMAPLAHGDPVTPGGDEAGFLASLRSAGITYATPEAAITFAKSVCVSMGDGEVGPQM 73 Query 79 AEEVLSQT-NLTTKQAAYFVVDATKAYCPQ 107 +E+ SQ LT ++A F+ A K YCPQ Sbjct 74 VDELKSQNPELTNERATSFLAIAAKYYCPQ 103 >gi|118463814|ref|YP_882093.1| hypothetical protein MAV_2907 [Mycobacterium avium 104] gi|254775383|ref|ZP_05216899.1| hypothetical protein MaviaA2_12041 [Mycobacterium avium subsp. avium ATCC 25291] gi|118165101|gb|ABK65998.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336457570|gb|EGO36575.1| Protein of unknown function (DUF732) [Mycobacterium avium subsp. paratuberculosis S397] Length=102 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/72 (42%), Positives = 45/72 (63%), Gaps = 2/72 (2%) Query 38 DEA-FIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEVLSQT-NLTTKQAAY 95 DEA F+A + S G+ +++PQ A + AQ VC + +GE+G ++ +E+ SQ LT A Sbjct 26 DEAGFLASLRSAGIGYATPQGAIKFAQAVCVSMGNGESGPQLLDELKSQNPGLTNDHATS 85 Query 96 FVVDATKAYCPQ 107 F+ A K YCPQ Sbjct 86 FLAIAAKYYCPQ 97 >gi|111026930|ref|YP_708908.1| hypothetical protein RHA1_ro11103 [Rhodococcus jostii RHA1] gi|110825469|gb|ABH00750.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=162 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/98 (33%), Positives = 52/98 (54%), Gaps = 2/98 (2%) Query 17 VGAAAIG-LAVATAGTAGA-NTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGET 74 +G +A+G ++VA A TA + + +D F+ M G+ FS+ A +C + A G T Sbjct 63 IGVSALGAVSVANADTASSLSGQDAVFVEGMADEGIAFSTDDAGVGLAHHICGEFADGAT 122 Query 75 GTEIAEEVLSQTNLTTKQAAYFVVDATKAYCPQYASQL 112 E+A E L ++L+ + Y + + YCPQY QL Sbjct 123 FEEVAAEGLQHSSLSAYEVGYVIGGSVSVYCPQYTDQL 160 >gi|183984092|ref|YP_001852383.1| hypothetical protein MMAR_4121 [Mycobacterium marinum M] gi|183177418|gb|ACC42528.1| conserved hypothetical secreted protein [Mycobacterium marinum M] Length=113 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 28/71 (40%), Positives = 40/71 (57%), Gaps = 0/71 (0%) Query 38 DEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEVLSQTNLTTKQAAYFV 97 D+AF+AQ+++ G+T S A A VC L G + T + V T L++K A F Sbjct 39 DDAFLAQIQADGITPPSAARAISDAHAVCTALDEGNSPTTVINAVAESTGLSSKGAKTFA 98 Query 98 VDATKAYCPQY 108 +DA AYCP+Y Sbjct 99 IDAASAYCPEY 109 >gi|118619190|ref|YP_907522.1| hypothetical protein MUL_3987 [Mycobacterium ulcerans Agy99] gi|118571300|gb|ABL06051.1| conserved hypothetical secreted protein [Mycobacterium ulcerans Agy99] Length=113 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 28/71 (40%), Positives = 40/71 (57%), Gaps = 0/71 (0%) Query 38 DEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEVLSQTNLTTKQAAYFV 97 D+AF+AQ+++ G+T S A A VC L G + T + V T L++K A F Sbjct 39 DDAFLAQIQADGITPPSAARAISDAHAVCTALDEGNSPTTVINAVAESTGLSSKGAKTFA 98 Query 98 VDATKAYCPQY 108 +DA AYCP+Y Sbjct 99 IDAASAYCPEY 109 >gi|41407621|ref|NP_960457.1| hypothetical protein MAP1523 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395974|gb|AAS03840.1| hypothetical protein MAP_1523 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336457573|gb|EGO36578.1| Protein of unknown function (DUF732) [Mycobacterium avium subsp. paratuberculosis S397] Length=106 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 37/103 (36%), Positives = 55/103 (54%), Gaps = 7/103 (6%) Query 8 RIIAAFTTAVGAAAIGL-AVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQAQLVC 66 R++A +GAAA+G A A A G D AF+A ++ G+T+SSP A+ VC Sbjct 3 RVLALL--GIGAAALGYTAPARAEPQG---DDAAFLASLDQSGITYSSPVQVIASAKAVC 57 Query 67 KKLASGETGTEIAEEVLSQT-NLTTKQAAYFVVDATKAYCPQY 108 + GETG ++ ++ Q +T AA F A+ AYCP + Sbjct 58 GLMGRGETGLQVVTDIKDQNPGMTMDGAAQFAALASNAYCPHH 100 >gi|296166615|ref|ZP_06849043.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898018|gb|EFG77596.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=120 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 35/114 (31%), Positives = 59/114 (52%), Gaps = 7/114 (6%) Query 5 LSPRIIAAFTTAVGAAAIGLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQ--VATQQA 62 LSPR +A T V A A+ L G A A+T D+A++A++ ++G+T+ + T Sbjct 2 LSPRRLAGLTAPVLAGAVLLT--NPGMATADTADDAYLARLHTLGLTWPADHDLPLTTMG 59 Query 63 QLVCKKLASGETGTEIAEEV---LSQTNLTTKQAAYFVVDATKAYCPQYASQLT 113 +L+C +A G + +IA+ + L ++ K+ A V A YCP + L Sbjct 60 RLICDDIAWGYSYDQIAQGIHPNLDSRKVSLKEVASMVSVAHSTYCPDVRAMLN 113 >gi|296166911|ref|ZP_06849328.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897788|gb|EFG77377.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=121 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 25/71 (36%), Positives = 37/71 (53%), Gaps = 0/71 (0%) Query 41 FIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEVLSQTNLTTKQAAYFVVDA 100 F++ + G+ + P A A VC S + + +A + + TNLT KQA +FV + Sbjct 36 FLSGLADNGIVINDPDTAISMAHTVCAGFDSNQPASLLAMKAMRNTNLTPKQAGFFVGLS 95 Query 101 TKAYCPQYASQ 111 AYCPQY Q Sbjct 96 VSAYCPQYKGQ 106 >gi|240169301|ref|ZP_04747960.1| hypothetical protein MkanA1_08306 [Mycobacterium kansasii ATCC 12478] Length=102 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/102 (32%), Positives = 54/102 (53%), Gaps = 9/102 (8%) Query 9 IIAAFTTAVGAAAIGLAVATAGTAGAN--TKDEAFIAQMESIGVTFSSPQVATQQAQLVC 66 +++AFTT IG+A AG + +D F+ ++ G+T+S+P A + A +C Sbjct 4 LLSAFTT------IGIAAPALADAGVDLGARDVGFLGALQDAGITYSNPGHAVESAHAMC 57 Query 67 KKLASGETGTEIAEEVLSQT-NLTTKQAAYFVVDATKAYCPQ 107 + L GE+G + ++V Q + A+ F V A K YCP+ Sbjct 58 RNLHHGESGLQAVQQVKIQNPPIDLDTASRFAVIAAKYYCPE 99 >gi|118618176|ref|YP_906508.1| hypothetical protein MUL_2724 [Mycobacterium ulcerans Agy99] gi|118570286|gb|ABL05037.1| conserved hypothetical membrane protein [Mycobacterium ulcerans Agy99] Length=99 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/91 (36%), Positives = 46/91 (51%), Gaps = 2/91 (2%) Query 19 AAAIGLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEI 78 A G V AG A A D F+ ++ IG+T+ SP A A+ VC L GE+G + Sbjct 6 AVVFGAPVWVAGVARAG-DDVGFLVALQRIGITYPSPAQAIDAARAVCVCLDRGESGLAV 64 Query 79 AEEVLSQT-NLTTKQAAYFVVDATKAYCPQY 108 +EV ++ AA+F V +T YCP + Sbjct 65 VQEVTARNPGFDMDAAAHFAVISTTYYCPHH 95 >gi|118466065|ref|YP_882736.1| hypothetical protein MAV_3558 [Mycobacterium avium 104] gi|118167352|gb|ABK68249.1| conserved hypothetical protein [Mycobacterium avium 104] Length=122 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 35/108 (33%), Positives = 54/108 (50%), Gaps = 6/108 (5%) Query 8 RIIAAFTTAVG-AAAIGLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQAQLVC 66 R + F G AA IGLAV A A++ D+AF+A ++ G+ + A + VC Sbjct 7 RFMKLFLIVAGFAAVIGLAVP----ARADSTDDAFVASLDKAGIKYGDADKAAGAGKWVC 62 Query 67 KKLASGETGTEIAEEVLSQ-TNLTTKQAAYFVVDATKAYCPQYASQLT 113 L G+ +++ + S+ +NL+ A F A AYCP AS +T Sbjct 63 TTLQGGKQMSDVVSTLQSKNSNLSDDHANTFAAIAVNAYCPDQASSIT 110 >gi|240173096|ref|ZP_04751754.1| hypothetical protein MkanA1_27536 [Mycobacterium kansasii ATCC 12478] Length=110 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 31/90 (35%), Positives = 46/90 (52%), Gaps = 2/90 (2%) Query 25 AVATAGTAGANTKDEA-FIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEV- 82 A A A G + D+A F+A ++ G+T+ SP A AQ VC L +GE G E+ EV Sbjct 21 APAHADPQGPSGGDDAGFLAALQQAGITYPSPAAAIGSAQAVCGCLDNGEAGLEVVHEVK 80 Query 83 LSQTNLTTKQAAYFVVDATKAYCPQYASQL 112 + + A+ F V + K YCP + + Sbjct 81 VRNPGFNMEAASQFAVISAKYYCPHHLGHV 110 >gi|254775379|ref|ZP_05216895.1| hypothetical protein MaviaA2_12021 [Mycobacterium avium subsp. avium ATCC 25291] Length=106 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 26/73 (36%), Positives = 40/73 (55%), Gaps = 1/73 (1%) Query 37 KDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEVLSQT-NLTTKQAAY 95 D AF+A ++ G+T+SSP A+ VC + GETG ++ ++ Q +T AA Sbjct 28 DDAAFLASLDQSGITYSSPVQVIASAKAVCGLMGRGETGLQVVTDIKDQNPGMTMDGAAQ 87 Query 96 FVVDATKAYCPQY 108 F A+ AYCP + Sbjct 88 FAALASNAYCPHH 100 >gi|339783968|gb|AEK09679.1| gp65 [Mycobacterium phage Mozy] Length=115 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 34/103 (34%), Positives = 51/103 (50%), Gaps = 1/103 (0%) Query 6 SPRIIAAFTTAVGAAAIGLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQAQLV 65 S R + A IG +A A A A+ +AFI ++S G+T+SS + V Sbjct 7 SWRYWWTMPLLIAAGIIGPGLA-APKAHADITSDAFIMALDSEGITYSSKPAVINAGKAV 65 Query 66 CKKLASGETGTEIAEEVLSQTNLTTKQAAYFVVDATKAYCPQY 108 C L +G T E + V + +NL A YFV AT ++CP++ Sbjct 66 CDVLDTGTTMYEASVFVYNNSNLNLYDAGYFVGAATASFCPEH 108 >gi|157311245|ref|YP_001469289.1| gp56 [Mycobacterium phage Tweety] gi|318065849|ref|YP_004123881.1| gp59 [Mycobacterium phage Wee] gi|148540874|gb|ABQ86125.1| gp56 [Mycobacterium phage Tweety] gi|315420932|gb|ADU15933.1| gp59 [Mycobacterium phage Wee] Length=115 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 31/94 (33%), Positives = 50/94 (54%), Gaps = 1/94 (1%) Query 17 VGAAAIGLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGT 76 + A IG + TA A A+ +AF+ ++S G+T+SS + VC L +G T Sbjct 18 IAAGIIGPGL-TAPEAHADINSDAFVMALDSEGITYSSKPAVINAGKAVCDVLDTGYTMY 76 Query 77 EIAEEVLSQTNLTTKQAAYFVVDATKAYCPQYAS 110 E + V + +NL + YFV AT ++CP++ S Sbjct 77 EASVFVYNNSNLNLYDSGYFVGAATASFCPEHLS 110 >gi|339780929|gb|AEK06765.1| gp57 [Mycobacterium phage RockyHorror] Length=111 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 36/104 (35%), Positives = 53/104 (51%), Gaps = 8/104 (7%) Query 7 PRIIAAFTTAVGAAAIGLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQAQLVC 66 P +IAA G GLA A A A+ +AFI ++S G+T+SS + VC Sbjct 11 PLLIAA-----GIIGPGLA---APKAHADITSDAFIMALDSEGITYSSKPAVINAGKAVC 62 Query 67 KKLASGETGTEIAEEVLSQTNLTTKQAAYFVVDATKAYCPQYAS 110 L +G T E + V + +NL + YFV AT ++CP++ S Sbjct 63 DVLDTGYTMYEASVFVYNNSNLNLYDSGYFVGAATASFCPEHLS 106 >gi|339783437|gb|AEK09152.1| gp56 [Mycobacterium phage Ibhubesi] Length=115 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 34/105 (33%), Positives = 52/105 (50%), Gaps = 1/105 (0%) Query 6 SPRIIAAFTTAVGAAAIGLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQAQLV 65 S R + A IG +A A A A+ +AF+ ++S G+T+SS + V Sbjct 7 SWRYWWTMPLLIAAGIIGPGLA-APAAKADITSDAFVMALDSEGITYSSKPAVINAGKAV 65 Query 66 CKKLASGETGTEIAEEVLSQTNLTTKQAAYFVVDATKAYCPQYAS 110 C L +G T E + V + +NL A YFV AT ++CP++ S Sbjct 66 CDVLDTGYTMYEASVFVYNNSNLNLYDAGYFVGAATASFCPEHLS 110 >gi|109522137|ref|YP_655814.1| gp53 [Mycobacterium phage PMC] gi|194303008|ref|YP_002014277.1| gp61 [Mycobacterium phage Boomer] gi|206600129|ref|YP_002241634.1| gp50 [Mycobacterium phage Pacc40] gi|91980837|gb|ABE67554.1| gp53 [Mycobacterium phage PMC] gi|194153056|gb|ACF34123.1| gp61 [Mycobacterium phage Boomer] gi|206287217|gb|ACI12561.1| gp50 [Mycobacterium phage Pacc40] Length=115 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 33/103 (33%), Positives = 52/103 (51%), Gaps = 1/103 (0%) Query 6 SPRIIAAFTTAVGAAAIGLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQAQLV 65 S R + A IG +A A A A+ +AF+ ++S G+T+SS A + V Sbjct 7 SWRYWWTMPLLIAAGIIGPGLA-APAAHADITSDAFVMALDSEGITYSSKPAAINAGKAV 65 Query 66 CKKLASGETGTEIAEEVLSQTNLTTKQAAYFVVDATKAYCPQY 108 C L +G T E + V + +NL + YFV AT ++CP++ Sbjct 66 CDVLDTGYTMYEASVFVYNNSNLNLYDSGYFVGAATASFCPEH 108 >gi|120405667|ref|YP_955496.1| hypothetical protein Mvan_4716 [Mycobacterium vanbaalenii PYR-1] gi|119958485|gb|ABM15490.1| protein of unknown function DUF732 [Mycobacterium vanbaalenii PYR-1] Length=99 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 25/72 (35%), Positives = 45/72 (63%), Gaps = 0/72 (0%) Query 35 NTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGTEIAEEVLSQTNLTTKQAA 94 + D+ FI+ +++ G+ FS+ + A + A VC A+G+ T+IA E++ T +Q+ Sbjct 27 DETDDIFISALQNQGIPFSTAENAIELASAVCDYAAAGQDPTQIALEIMEPAGWTAEQSG 86 Query 95 YFVVDATKAYCP 106 +FV AT++YCP Sbjct 87 FFVGAATQSYCP 98 >gi|339753214|gb|AEJ93240.1| gp55 [Mycobacterium phage ShiLan] Length=115 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 31/94 (33%), Positives = 49/94 (53%), Gaps = 1/94 (1%) Query 17 VGAAAIGLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGT 76 + A IG +A A A A+ +AF+ ++S G+T+SS + +C L +G T Sbjct 18 IAAGIIGPGLA-APHAHADITSDAFVMALDSEGITYSSKPAVINAGKAICNILDTGATMY 76 Query 77 EIAEEVLSQTNLTTKQAAYFVVDATKAYCPQYAS 110 E + V +NL A YFV AT ++CP++ S Sbjct 77 EASILVRDNSNLNLDDAGYFVGAATASFCPEHLS 110 Lambda K H 0.313 0.122 0.325 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 127560148160 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40