BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1287 Length=161 Score E Sequences producing significant alignments: (Bits) Value gi|15608427|ref|NP_215803.1| hypothetical protein Rv1287 [Mycoba... 322 1e-86 gi|308371930|ref|ZP_07426693.2| hypothetical protein TMDG_01165 ... 317 3e-85 gi|339294269|gb|AEJ46380.1| hypothetical protein CCDC5079_1190 [... 300 5e-80 gi|240169536|ref|ZP_04748195.1| hypothetical protein MkanA1_0949... 299 1e-79 gi|41408581|ref|NP_961417.1| hypothetical protein MAP2483c [Myco... 292 1e-77 gi|183984102|ref|YP_001852393.1| putative transcriptional regula... 292 1e-77 gi|118619195|ref|YP_907527.1| putative transcriptional regulator... 290 4e-77 gi|342858066|ref|ZP_08714722.1| BadM/Rrf2 family transcriptional... 290 4e-77 gi|254821269|ref|ZP_05226270.1| hypothetical protein MintA_15127... 290 5e-77 gi|254774316|ref|ZP_05215832.1| hypothetical protein MaviaA2_065... 290 7e-77 gi|336458513|gb|EGO37484.1| rrf2 family protein, putative transc... 288 2e-76 gi|118464782|ref|YP_880680.1| StaS protein [Mycobacterium avium ... 285 2e-75 gi|296170194|ref|ZP_06851788.1| Rrf2 family transcriptional regu... 284 4e-75 gi|120405372|ref|YP_955201.1| BadM/Rrf2 family transcriptional r... 259 1e-67 gi|145222864|ref|YP_001133542.1| BadM/Rrf2 family transcriptiona... 258 2e-67 gi|118469239|ref|YP_889225.1| rrf2 family protein (transcription... 258 3e-67 gi|333989922|ref|YP_004522536.1| transcriptional regulator [Myco... 257 5e-67 gi|108800879|ref|YP_641076.1| BadM/Rrf2 family transcriptional r... 255 2e-66 gi|345013348|ref|YP_004815702.1| BadM/Rrf2 family transcriptiona... 151 3e-35 gi|302539851|ref|ZP_07292193.1| Rrf2 family protein [Streptomyce... 147 7e-34 gi|21911420|gb|AAM80543.1| StaS [Streptomyces toyocaensis] 144 4e-33 gi|159038921|ref|YP_001538174.1| BadM/Rrf2 family transcriptiona... 143 9e-33 gi|330469219|ref|YP_004406962.1| BadM/Rrf2 family transcriptiona... 142 2e-32 gi|297162887|gb|ADI12599.1| transcriptional regulator [Streptomy... 142 2e-32 gi|238060186|ref|ZP_04604895.1| BadM/Rrf2 family transcriptional... 139 1e-31 gi|302868852|ref|YP_003837489.1| Rrf2 family transcriptional reg... 139 1e-31 gi|145595671|ref|YP_001159968.1| Rrf2 family transcriptional reg... 139 2e-31 gi|269127506|ref|YP_003300876.1| BadM/Rrf2 family transcriptiona... 137 5e-31 gi|336322200|ref|YP_004602168.1| BadM/Rrf2 family transcriptiona... 137 6e-31 gi|256389580|ref|YP_003111144.1| BadM/Rrf2 family transcriptiona... 136 1e-30 gi|226303826|ref|YP_002763784.1| Rrf2 family DNA-binding protein... 132 1e-29 gi|302532532|ref|ZP_07284874.1| iron-sulfur cluster assembly tra... 132 2e-29 gi|291441270|ref|ZP_06580660.1| transcriptional regulator [Strep... 132 2e-29 gi|334338260|ref|YP_004543412.1| transcriptional regulator, BadM... 132 2e-29 gi|117164556|emb|CAJ88102.1| putative transcriptional regulator ... 132 2e-29 gi|111021140|ref|YP_704112.1| transcriptional regulator [Rhodoco... 131 4e-29 gi|226363500|ref|YP_002781282.1| Rrf2 family DNA-binding protein... 131 4e-29 gi|296131265|ref|YP_003638515.1| BadM/Rrf2 family transcriptiona... 130 6e-29 gi|329934735|ref|ZP_08284776.1| putative transcriptional regulat... 129 1e-28 gi|291301253|ref|YP_003512531.1| BadM/Rrf2 family transcriptiona... 129 2e-28 gi|284046052|ref|YP_003396392.1| Rrf2 family/BadM/Rrf2 family tr... 129 2e-28 gi|256392947|ref|YP_003114511.1| BadM/Rrf2 family transcriptiona... 128 2e-28 gi|297559632|ref|YP_003678606.1| BadM/Rrf2 family transcriptiona... 128 3e-28 gi|332668756|ref|YP_004451763.1| BadM/Rrf2 family transcriptiona... 127 5e-28 gi|290960745|ref|YP_003491927.1| transcriptional regulator [Stre... 126 1e-27 gi|117929268|ref|YP_873819.1| BadM/Rrf2 family transcriptional r... 126 1e-27 gi|345012713|ref|YP_004815067.1| BadM/Rrf2 family transcriptiona... 125 1e-27 gi|29832300|ref|NP_826934.1| transcriptional regulator [Streptom... 125 2e-27 gi|294629169|ref|ZP_06707729.1| Rrf2 family protein [Streptomyce... 124 3e-27 gi|269956765|ref|YP_003326554.1| BadM/Rrf2 family transcriptiona... 124 5e-27 >gi|15608427|ref|NP_215803.1| hypothetical protein Rv1287 [Mycobacterium tuberculosis H37Rv] gi|15840735|ref|NP_335772.1| hypothetical protein MT1325 [Mycobacterium tuberculosis CDC1551] gi|31792479|ref|NP_854972.1| hypothetical protein Mb1318 [Mycobacterium bovis AF2122/97] 70 more sequence titles Length=161 Score = 322 bits (824), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 161/161 (100%), Positives = 161/161 (100%), Gaps = 0/161 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG Sbjct 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS Sbjct 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 Query 121 VLEETTLADVAGGALPEHVAQLADDYRAQESTRHGASRHGD 161 VLEETTLADVAGGALPEHVAQLADDYRAQESTRHGASRHGD Sbjct 121 VLEETTLADVAGGALPEHVAQLADDYRAQESTRHGASRHGD 161 >gi|308371930|ref|ZP_07426693.2| hypothetical protein TMDG_01165 [Mycobacterium tuberculosis SUMu004] gi|308373100|ref|ZP_07431000.2| hypothetical protein TMEG_01183 [Mycobacterium tuberculosis SUMu005] gi|308374277|ref|ZP_07435406.2| hypothetical protein TMFG_02477 [Mycobacterium tuberculosis SUMu006] 7 more sequence titles Length=159 Score = 317 bits (812), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%) Query 3 MSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRGRE 62 MSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRGRE Sbjct 1 MSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRGRE 60 Query 63 GGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRSVL 122 GGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRSVL Sbjct 61 GGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRSVL 120 Query 123 EETTLADVAGGALPEHVAQLADDYRAQESTRHGASRHGD 161 EETTLADVAGGALPEHVAQLADDYRAQESTRHGASRHGD Sbjct 121 EETTLADVAGGALPEHVAQLADDYRAQESTRHGASRHGD 159 >gi|339294269|gb|AEJ46380.1| hypothetical protein CCDC5079_1190 [Mycobacterium tuberculosis CCDC5079] gi|339297909|gb|AEJ50019.1| hypothetical protein CCDC5180_1182 [Mycobacterium tuberculosis CCDC5180] Length=151 Score = 300 bits (768), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 150/151 (99%), Positives = 151/151 (100%), Gaps = 0/151 (0%) Query 11 VRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRGREGGYELARP 70 +RAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRGREGGYELARP Sbjct 1 MRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRGREGGYELARP 60 Query 71 GTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRSVLEETTLADV 130 GTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRSVLEETTLADV Sbjct 61 GTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRSVLEETTLADV 120 Query 131 AGGALPEHVAQLADDYRAQESTRHGASRHGD 161 AGGALPEHVAQLADDYRAQESTRHGASRHGD Sbjct 121 AGGALPEHVAQLADDYRAQESTRHGASRHGD 151 >gi|240169536|ref|ZP_04748195.1| hypothetical protein MkanA1_09496 [Mycobacterium kansasii ATCC 12478] Length=161 Score = 299 bits (765), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 147/161 (92%), Positives = 153/161 (96%), Gaps = 0/161 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MRMSAKAEYAVRAMVQLATA +G +VKTDDLA AQGIPPQFLVDILTNLRTDRLVRSHRG Sbjct 1 MRMSAKAEYAVRAMVQLATAPTGNLVKTDDLAQAQGIPPQFLVDILTNLRTDRLVRSHRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 REGGYELARPG+EISIADVLRCIDGPLASVRDIGLGDLPYSGPT ALTDVWRALRASMRS Sbjct 61 REGGYELARPGSEISIADVLRCIDGPLASVRDIGLGDLPYSGPTAALTDVWRALRASMRS 120 Query 121 VLEETTLADVAGGALPEHVAQLADDYRAQESTRHGASRHGD 161 VLEETTLADVA G LP+HVAQLADDYRAQES RHG++R GD Sbjct 121 VLEETTLADVAAGTLPKHVAQLADDYRAQESKRHGSTRSGD 161 >gi|41408581|ref|NP_961417.1| hypothetical protein MAP2483c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396939|gb|AAS04800.1| hypothetical protein MAP_2483c [Mycobacterium avium subsp. paratuberculosis K-10] Length=161 Score = 292 bits (748), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 144/161 (90%), Positives = 150/161 (94%), Gaps = 0/161 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MRMSAKAEYAVRAM+QLAT GT+VKTDDLA AQGIPPQFLVDILTNLRTDRLVRSHRG Sbjct 1 MRMSAKAEYAVRAMIQLATVPDGTLVKTDDLAQAQGIPPQFLVDILTNLRTDRLVRSHRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 REGGYELARPG +ISIADVLRCIDGPLASVRDIGLGDLPYSGPT ALTDVWRALRASMRS Sbjct 61 REGGYELARPGKDISIADVLRCIDGPLASVRDIGLGDLPYSGPTAALTDVWRALRASMRS 120 Query 121 VLEETTLADVAGGALPEHVAQLADDYRAQESTRHGASRHGD 161 VLEETTLADVA G+LP+HVAQLADDYR QES RHG +R GD Sbjct 121 VLEETTLADVATGSLPKHVAQLADDYRKQESQRHGTARTGD 161 >gi|183984102|ref|YP_001852393.1| putative transcriptional regulatory protein [Mycobacterium marinum M] gi|183177428|gb|ACC42538.1| conserved hypothetical transcriptional regulatory protein [Mycobacterium marinum M] Length=161 Score = 292 bits (747), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 146/161 (91%), Positives = 153/161 (96%), Gaps = 0/161 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MRMSAKAEYAVRAMVQLATA SGTV+KT+DLA AQGIPPQFLVDILTNLRTDRLVRSHRG Sbjct 1 MRMSAKAEYAVRAMVQLATADSGTVIKTEDLAQAQGIPPQFLVDILTNLRTDRLVRSHRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 R+GGYELARPGT+ISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS Sbjct 61 RDGGYELARPGTDISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 Query 121 VLEETTLADVAGGALPEHVAQLADDYRAQESTRHGASRHGD 161 VLEETTLADVA GALP HVA+LAD YRAQE RHG++R GD Sbjct 121 VLEETTLADVATGALPGHVAKLADAYRAQEFERHGSARSGD 161 >gi|118619195|ref|YP_907527.1| putative transcriptional regulatory protein [Mycobacterium ulcerans Agy99] gi|118571305|gb|ABL06056.1| conserved hypothetical transcriptional regulatory protein [Mycobacterium ulcerans Agy99] Length=161 Score = 290 bits (743), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 145/161 (91%), Positives = 152/161 (95%), Gaps = 0/161 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MRMSAKAEYAVRAMVQLAT SGTV+KT+DLA AQGIPPQFLVDILTNLRTDRLVRSHRG Sbjct 1 MRMSAKAEYAVRAMVQLATTDSGTVIKTEDLAQAQGIPPQFLVDILTNLRTDRLVRSHRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 R+GGYELARPGT+ISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS Sbjct 61 RDGGYELARPGTDISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 Query 121 VLEETTLADVAGGALPEHVAQLADDYRAQESTRHGASRHGD 161 VLEETTLADVA GALP HVA+LAD YRAQE RHG++R GD Sbjct 121 VLEETTLADVATGALPGHVAKLADAYRAQEFERHGSARSGD 161 >gi|342858066|ref|ZP_08714722.1| BadM/Rrf2 family transcriptional regulator [Mycobacterium colombiense CECT 3035] gi|342135399|gb|EGT88565.1| BadM/Rrf2 family transcriptional regulator [Mycobacterium colombiense CECT 3035] Length=161 Score = 290 bits (742), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 144/161 (90%), Positives = 148/161 (92%), Gaps = 0/161 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MRMSAKAEYAVRAM+QLAT GT+VKTDDLA AQGIPPQFLVDILTNLRTDRLVRSHRG Sbjct 1 MRMSAKAEYAVRAMIQLATVPDGTLVKTDDLAQAQGIPPQFLVDILTNLRTDRLVRSHRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 REGGYELAR G EISIADVLRCIDGPLASVRDIGLGDLPYSGPT ALTDVWRALRASMRS Sbjct 61 REGGYELARSGKEISIADVLRCIDGPLASVRDIGLGDLPYSGPTAALTDVWRALRASMRS 120 Query 121 VLEETTLADVAGGALPEHVAQLADDYRAQESTRHGASRHGD 161 VLEETTLADVA G LP+HVAQLADDYR QES RHG +R GD Sbjct 121 VLEETTLADVATGGLPKHVAQLADDYRKQESQRHGTARTGD 161 >gi|254821269|ref|ZP_05226270.1| hypothetical protein MintA_15127 [Mycobacterium intracellulare ATCC 13950] Length=161 Score = 290 bits (742), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 142/161 (89%), Positives = 151/161 (94%), Gaps = 0/161 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MRMSAKAEYAVRAM+QLAT + GT+VKTDDLA AQGIPPQFLVDILTNLRTDRLVRSHRG Sbjct 1 MRMSAKAEYAVRAMIQLATVSDGTLVKTDDLAQAQGIPPQFLVDILTNLRTDRLVRSHRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 REGGYELAR G++ISIADVLRCIDGPLASVRDIGLGDLPYSGPT ALTDVWRALRASMRS Sbjct 61 REGGYELARSGSDISIADVLRCIDGPLASVRDIGLGDLPYSGPTAALTDVWRALRASMRS 120 Query 121 VLEETTLADVAGGALPEHVAQLADDYRAQESTRHGASRHGD 161 VLE+TTLADVA G LP+HVAQLADDYR QES RHG++R GD Sbjct 121 VLEQTTLADVATGGLPKHVAQLADDYRKQESQRHGSARTGD 161 >gi|254774316|ref|ZP_05215832.1| hypothetical protein MaviaA2_06565 [Mycobacterium avium subsp. avium ATCC 25291] Length=161 Score = 290 bits (741), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 143/161 (89%), Positives = 149/161 (93%), Gaps = 0/161 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MRMSAKAEYAVRAM+QLAT GT+VKTDDLA AQGIPPQFLVDILTNLRTDRLVRSHRG Sbjct 1 MRMSAKAEYAVRAMIQLATVPDGTLVKTDDLAQAQGIPPQFLVDILTNLRTDRLVRSHRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 REGGYELARPG +ISIADVLRCIDGPLASVRDIGLGDLPYSGPT ALTDVWRALRASMR Sbjct 61 REGGYELARPGKDISIADVLRCIDGPLASVRDIGLGDLPYSGPTAALTDVWRALRASMRL 120 Query 121 VLEETTLADVAGGALPEHVAQLADDYRAQESTRHGASRHGD 161 VLEETTLADVA G+LP+HVAQLADDYR QES RHG +R GD Sbjct 121 VLEETTLADVATGSLPKHVAQLADDYRKQESQRHGTARTGD 161 >gi|336458513|gb|EGO37484.1| rrf2 family protein, putative transcriptional regulator [Mycobacterium avium subsp. paratuberculosis S397] Length=159 Score = 288 bits (736), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 142/159 (90%), Positives = 148/159 (94%), Gaps = 0/159 (0%) Query 3 MSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRGRE 62 MSAKAEYAVRAM+QLAT GT+VKTDDLA AQGIPPQFLVDILTNLRTDRLVRSHRGRE Sbjct 1 MSAKAEYAVRAMIQLATVPDGTLVKTDDLAQAQGIPPQFLVDILTNLRTDRLVRSHRGRE 60 Query 63 GGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRSVL 122 GGYELARPG +ISIADVLRCIDGPLASVRDIGLGDLPYSGPT ALTDVWRALRASMRSVL Sbjct 61 GGYELARPGKDISIADVLRCIDGPLASVRDIGLGDLPYSGPTAALTDVWRALRASMRSVL 120 Query 123 EETTLADVAGGALPEHVAQLADDYRAQESTRHGASRHGD 161 EETTLADVA G+LP+HVAQLADDYR QES RHG +R GD Sbjct 121 EETTLADVATGSLPKHVAQLADDYRKQESQRHGTARTGD 159 >gi|118464782|ref|YP_880680.1| StaS protein [Mycobacterium avium 104] gi|118166069|gb|ABK66966.1| StaS protein [Mycobacterium avium 104] Length=159 Score = 285 bits (729), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 141/159 (89%), Positives = 147/159 (93%), Gaps = 0/159 (0%) Query 3 MSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRGRE 62 MSAKAEYAVRAM+QLAT GT+VKTDDLA AQGIPPQFLVDILTNLRTDRLVRSHRGRE Sbjct 1 MSAKAEYAVRAMIQLATVPDGTLVKTDDLAQAQGIPPQFLVDILTNLRTDRLVRSHRGRE 60 Query 63 GGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRSVL 122 GGYELARPG +ISIADVLRCIDGPLASVRDIGLGDLPYSGPT ALTDVWRALRASMR VL Sbjct 61 GGYELARPGKDISIADVLRCIDGPLASVRDIGLGDLPYSGPTAALTDVWRALRASMRLVL 120 Query 123 EETTLADVAGGALPEHVAQLADDYRAQESTRHGASRHGD 161 EETTLADVA G+LP+HVAQLADDYR QES RHG +R GD Sbjct 121 EETTLADVATGSLPKHVAQLADDYRKQESQRHGTARTGD 159 >gi|296170194|ref|ZP_06851788.1| Rrf2 family transcriptional regulator [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895146|gb|EFG74863.1| Rrf2 family transcriptional regulator [Mycobacterium parascrofulaceum ATCC BAA-614] Length=159 Score = 284 bits (726), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 141/159 (89%), Positives = 145/159 (92%), Gaps = 0/159 (0%) Query 3 MSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRGRE 62 MSAKAEYAVRAMVQLAT GT+VKTDDLA AQGIPPQFLVDILTNLRTDRLVRSHRGRE Sbjct 1 MSAKAEYAVRAMVQLATVPHGTLVKTDDLAQAQGIPPQFLVDILTNLRTDRLVRSHRGRE 60 Query 63 GGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRSVL 122 GGYELARPG EISIADVLRCIDGPLASVRDIGLGDLPYSGPT ALTDVWRALRASMRSVL Sbjct 61 GGYELARPGDEISIADVLRCIDGPLASVRDIGLGDLPYSGPTAALTDVWRALRASMRSVL 120 Query 123 EETTLADVAGGALPEHVAQLADDYRAQESTRHGASRHGD 161 EETTLADVA ALP+HVA+ ADDYR QES RHG R G+ Sbjct 121 EETTLADVAANALPKHVAEFADDYRTQESARHGTPRAGE 159 >gi|120405372|ref|YP_955201.1| BadM/Rrf2 family transcriptional regulator [Mycobacterium vanbaalenii PYR-1] gi|119958190|gb|ABM15195.1| transcriptional regulator, BadM/Rrf2 family [Mycobacterium vanbaalenii PYR-1] Length=158 Score = 259 bits (661), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 128/153 (84%), Positives = 138/153 (91%), Gaps = 0/153 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MRMSAKAEYAVRAM++LATA G +VKTDDLA AQGIPPQFLVDIL++LRTDRLVRSHRG Sbjct 1 MRMSAKAEYAVRAMIELATADDGALVKTDDLAKAQGIPPQFLVDILSDLRTDRLVRSHRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 R+GGYELARP +ISIADVLRCIDGPLASVRDIGLGDLPYSGPT ALTDVWRALRASMRS Sbjct 61 RDGGYELARPAADISIADVLRCIDGPLASVRDIGLGDLPYSGPTAALTDVWRALRASMRS 120 Query 121 VLEETTLADVAGGALPEHVAQLADDYRAQESTR 153 VLE+T++ADVA G LP HV LADDYR QE R Sbjct 121 VLEQTSVADVASGGLPGHVRALADDYRRQEEAR 153 >gi|145222864|ref|YP_001133542.1| BadM/Rrf2 family transcriptional regulator [Mycobacterium gilvum PYR-GCK] gi|315443329|ref|YP_004076208.1| Rrf2 family/BadM/Rrf2 family transcriptional regulator/Rrf2 family [Mycobacterium sp. Spyr1] gi|145215350|gb|ABP44754.1| transcriptional regulator, BadM/Rrf2 family [Mycobacterium gilvum PYR-GCK] gi|315261632|gb|ADT98373.1| transcriptional regulator, BadM/Rrf2 family [Mycobacterium sp. Spyr1] Length=158 Score = 258 bits (659), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 127/153 (84%), Positives = 137/153 (90%), Gaps = 0/153 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MRMSAKAEYAVRAMVQLAT G +VKTDDLA AQGIP QFLVDIL++LRTDRLVRSHRG Sbjct 1 MRMSAKAEYAVRAMVQLATVGDGALVKTDDLAKAQGIPAQFLVDILSDLRTDRLVRSHRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 R+GGYELARP +ISIADVLRCIDGPLASVRDIGLGDLPYSGPT +LTDVWRALRASMRS Sbjct 61 RDGGYELARPAADISIADVLRCIDGPLASVRDIGLGDLPYSGPTASLTDVWRALRASMRS 120 Query 121 VLEETTLADVAGGALPEHVAQLADDYRAQESTR 153 VLE+T+LADVA G LP+HV +ADDYR QE R Sbjct 121 VLEQTSLADVASGELPDHVRAMADDYRDQEEAR 153 >gi|118469239|ref|YP_889225.1| rrf2 family protein (transcriptional regulator) [Mycobacterium smegmatis str. MC2 155] gi|118170526|gb|ABK71422.1| rrf2 family protein (putative transcriptional regulator) [Mycobacterium smegmatis str. MC2 155] Length=156 Score = 258 bits (658), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 130/156 (84%), Positives = 139/156 (90%), Gaps = 1/156 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MRMSAKAEYAVRAMVQLAT + G ++KTDDLA AQGIP QFLVDIL++LRTDRLVRSHRG Sbjct 1 MRMSAKAEYAVRAMVQLATVSDGELLKTDDLAKAQGIPAQFLVDILSDLRTDRLVRSHRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 R+GGY LARP ISIADVLRCIDGPLASVRDIGLGDLPYSGPT ALTDVWRALRASMRS Sbjct 61 RDGGYALARPADAISIADVLRCIDGPLASVRDIGLGDLPYSGPTAALTDVWRALRASMRS 120 Query 121 VLEETTLADVAGGALPEHVAQLADDYRAQESTR-HG 155 VLEET+L+DVA GALP HV +LAD YRAQE R HG Sbjct 121 VLEETSLSDVAAGALPAHVVKLADVYRAQEEQRGHG 156 >gi|333989922|ref|YP_004522536.1| transcriptional regulator [Mycobacterium sp. JDM601] gi|333485890|gb|AEF35282.1| putative transcriptional regulatory protein [Mycobacterium sp. JDM601] Length=154 Score = 257 bits (656), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 128/154 (84%), Positives = 141/154 (92%), Gaps = 1/154 (0%) Query 3 MSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRGRE 62 MSAKAEYAVRAMVQLATA +GT+VKTDD+AAAQGIPPQFLVDIL++LRTDRLVRS RGR+ Sbjct 1 MSAKAEYAVRAMVQLATADAGTLVKTDDIAAAQGIPPQFLVDILSDLRTDRLVRSQRGRD 60 Query 63 GGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRSVL 122 GGYELAR +EIS+ADVLRCIDGPLASVRDIGLGDLPY+GPT ALTDVWRALRASMRSVL Sbjct 61 GGYELARAASEISVADVLRCIDGPLASVRDIGLGDLPYAGPTAALTDVWRALRASMRSVL 120 Query 123 EETTLADVAGGALPEHVAQLADDYRAQESTR-HG 155 E+T+L+DVA G LP HVA+ A DYRAQE R HG Sbjct 121 EQTSLSDVATGQLPAHVAEFAADYRAQERQRGHG 154 >gi|108800879|ref|YP_641076.1| BadM/Rrf2 family transcriptional regulator [Mycobacterium sp. MCS] gi|119870019|ref|YP_939971.1| BadM/Rrf2 family transcriptional regulator [Mycobacterium sp. KMS] gi|126436505|ref|YP_001072196.1| BadM/Rrf2 family transcriptional regulator [Mycobacterium sp. JLS] gi|108771298|gb|ABG10020.1| transcriptional regulator, BadM/Rrf2 family [Mycobacterium sp. MCS] gi|119696108|gb|ABL93181.1| transcriptional regulator, BadM/Rrf2 family [Mycobacterium sp. KMS] gi|126236305|gb|ABN99705.1| transcriptional regulator, BadM/Rrf2 family [Mycobacterium sp. JLS] Length=162 Score = 255 bits (651), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 128/153 (84%), Positives = 136/153 (89%), Gaps = 0/153 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MRMSAKAEYAVRAMVQLATA G +VKTDDLA AQGIP QFLVDIL++LRTDRLVRS RG Sbjct 1 MRMSAKAEYAVRAMVQLATADDGVLVKTDDLAKAQGIPAQFLVDILSDLRTDRLVRSQRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 R+GGYELARP +ISIADVLRCIDGPLASVRDIGLGDLPYSGPT ALTDVWRALRASMRS Sbjct 61 RDGGYELARPAADISIADVLRCIDGPLASVRDIGLGDLPYSGPTAALTDVWRALRASMRS 120 Query 121 VLEETTLADVAGGALPEHVAQLADDYRAQESTR 153 VLE+T+LADVA GALP HVA +A DY QE R Sbjct 121 VLEQTSLADVASGALPAHVASMAGDYLDQERKR 153 >gi|345013348|ref|YP_004815702.1| BadM/Rrf2 family transcriptional regulator [Streptomyces violaceusniger Tu 4113] gi|344039697|gb|AEM85422.1| transcriptional regulator, BadM/Rrf2 family [Streptomyces violaceusniger Tu 4113] Length=154 Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 81/146 (56%), Positives = 102/146 (70%), Gaps = 1/146 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MR++AK++YAVRAM +LA AA G+ + + +A Q IP +FL IL LR LVRS RG Sbjct 1 MRITAKSDYAVRAMAELA-AAEGSPLTAEQVATRQDIPLRFLFGILRELRLAHLVRSVRG 59 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 EGGY LARP EI++AD +R +DGPLA+VRD+GL L Y G L DVWRA+RAS+R Sbjct 60 PEGGYLLARPAKEITLADAIRAMDGPLANVRDVGLSGLEYPGAAAVLPDVWRAVRASLRQ 119 Query 121 VLEETTLADVAGGALPEHVAQLADDY 146 VLE+TT AD+A G LP V A +Y Sbjct 120 VLEKTTFADLAAGELPPLVQARAREY 145 >gi|302539851|ref|ZP_07292193.1| Rrf2 family protein [Streptomyces hygroscopicus ATCC 53653] gi|302457469|gb|EFL20562.1| Rrf2 family protein [Streptomyces himastatinicus ATCC 53653] Length=152 Score = 147 bits (370), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 79/148 (54%), Positives = 104/148 (71%), Gaps = 0/148 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MR+SAKA+YAVRA ++LA AA T +K + +AA+QG+P +FL IL +LR LV S RG Sbjct 1 MRISAKADYAVRAALELAVAADDTSLKAEVIAASQGVPHKFLEGILGDLRRGGLVVSQRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 +GGY LARP EI+IADV+R +DGPL SVR + +L Y GP +L +W A+RA++R Sbjct 61 GKGGYRLARPADEITIADVIRVVDGPLVSVRGVRPPELSYRGPAESLLPLWIAVRANVRK 120 Query 121 VLEETTLADVAGGALPEHVAQLADDYRA 148 +L E TLA+VA LPE V LA+D A Sbjct 121 ILGEVTLAEVAAAELPEGVLDLAEDPEA 148 >gi|21911420|gb|AAM80543.1| StaS [Streptomyces toyocaensis] Length=154 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 79/147 (54%), Positives = 101/147 (69%), Gaps = 1/147 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MR++A+ +YAVRAM +LA A T + ++L+A Q IP +FL IL LR RLV S RG Sbjct 1 MRITARTDYAVRAMAELA-AEGETPLTAEELSARQDIPVRFLFGILRELRLARLVHSVRG 59 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 +GGY LA EI++A V+R +DGPLASVR++ L L Y GP L DVWRA+R S+R Sbjct 60 PQGGYLLASAAEEITLAAVIRAVDGPLASVRELSLTGLEYPGPAAVLPDVWRAVRTSLRQ 119 Query 121 VLEETTLADVAGGALPEHVAQLADDYR 147 VLE TTLAD+A G LPE V A++YR Sbjct 120 VLETTTLADLARGELPEIVRSRAEEYR 146 >gi|159038921|ref|YP_001538174.1| BadM/Rrf2 family transcriptional regulator [Salinispora arenicola CNS-205] gi|157917756|gb|ABV99183.1| transcriptional regulator, BadM/Rrf2 family [Salinispora arenicola CNS-205] Length=156 Score = 143 bits (360), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 82/154 (54%), Positives = 98/154 (64%), Gaps = 6/154 (3%) Query 1 MRMSAKAEYAVRAMVQLATAASGT------VVKTDDLAAAQGIPPQFLVDILTNLRTDRL 54 MR+SA+ +YA+RA+ +LA+ SG V D +A AQ IPP+FL IL LR + Sbjct 1 MRLSARVDYALRAVAELASVTSGVSTGRGRTVTADQIARAQEIPPKFLESILLQLRRGGV 60 Query 55 VRSHRGREGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRAL 114 VR+ RG EGGY LARP EIS+A+V+R IDGPLA VR L Y G AL DVW AL Sbjct 61 VRAQRGPEGGYWLARPAEEISLAEVIRVIDGPLAHVRGQRPEQLGYHGAARALQDVWIAL 120 Query 115 RASMRSVLEETTLADVAGGALPEHVAQLADDYRA 148 RAS R +LE T+ADVAGG LP V L D RA Sbjct 121 RASERQILELVTVADVAGGTLPPRVTDLVADPRA 154 >gi|330469219|ref|YP_004406962.1| BadM/Rrf2 family transcriptional regulator [Verrucosispora maris AB-18-032] gi|328812190|gb|AEB46362.1| BadM/Rrf2 family transcriptional regulator [Verrucosispora maris AB-18-032] Length=153 Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 79/151 (53%), Positives = 99/151 (66%), Gaps = 3/151 (1%) Query 1 MRMSAKAEYAVRAMVQLAT---AASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRS 57 MR+SA+ +YA+RA+ +LA+ A G V D +A AQ IPP+FL IL LR ++++ Sbjct 1 MRLSARVDYALRAVTELASVTGAGRGRPVTADQIARAQDIPPKFLESILLQLRRGGIMQA 60 Query 58 HRGREGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRAS 117 RG EGGY LARP EIS+ADV+R IDGPLA +R L Y G AL DVW ALRA+ Sbjct 61 QRGPEGGYWLARPAEEISLADVIRVIDGPLAHIRGQRPEQLGYQGAARALQDVWIALRAN 120 Query 118 MRSVLEETTLADVAGGALPEHVAQLADDYRA 148 R +LE T+ADVA G LPE V +L D RA Sbjct 121 ERQILELVTVADVAQGTLPEQVTKLVSDPRA 151 >gi|297162887|gb|ADI12599.1| transcriptional regulator [Streptomyces bingchenggensis BCW-1] Length=161 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 78/148 (53%), Positives = 101/148 (69%), Gaps = 0/148 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 M++SA+A+YAVRA ++LA A T +K + +AAAQGIP +FL IL +LR LV S RG Sbjct 1 MQISARADYAVRAALELAAAGPDTSLKAEAIAAAQGIPHKFLEGILGDLRRGGLVTSRRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 GGY LARP EI+IADV+R DGPL SVR + L Y+GP +L +W A+RA++R Sbjct 61 GNGGYRLARPADEIAIADVIRVADGPLVSVRGVRPPQLSYTGPAESLLPLWVAVRANVRK 120 Query 121 VLEETTLADVAGGALPEHVAQLADDYRA 148 +L E TLADVA LP+ V LA+D A Sbjct 121 ILGEVTLADVATATLPDEVLVLAEDPEA 148 >gi|238060186|ref|ZP_04604895.1| BadM/Rrf2 family transcriptional regulator [Micromonospora sp. ATCC 39149] gi|237881997|gb|EEP70825.1| BadM/Rrf2 family transcriptional regulator [Micromonospora sp. ATCC 39149] Length=170 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 80/154 (52%), Positives = 99/154 (65%), Gaps = 6/154 (3%) Query 1 MRMSAKAEYAVRAMVQLATAASGTV------VKTDDLAAAQGIPPQFLVDILTNLRTDRL 54 MR+SA+ +YA+RA +LA A V + +A AQGIPP+FL IL LR + Sbjct 15 MRLSARVDYALRATAELAAVADDAGAARSRPVTAEQIAKAQGIPPKFLESILLQLRRGGI 74 Query 55 VRSHRGREGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRAL 114 V + RG EGGY LARP EIS+A+V+R IDGPLA VR L Y G AL DVW AL Sbjct 75 VHAQRGPEGGYWLARPAAEISLAEVIRVIDGPLAHVRGQRPEQLGYQGAAQALQDVWIAL 134 Query 115 RASMRSVLEETTLADVAGGALPEHVAQLADDYRA 148 RAS R +L+ T+ADVA GALPE +++LA D RA Sbjct 135 RASEREILDLVTVADVASGALPERISELAADPRA 168 >gi|302868852|ref|YP_003837489.1| Rrf2 family transcriptional regulator [Micromonospora aurantiaca ATCC 27029] gi|315504679|ref|YP_004083566.1| BadM/Rrf2 family transcriptional regulator [Micromonospora sp. L5] gi|302571711|gb|ADL47913.1| transcriptional regulator, Rrf2 family [Micromonospora aurantiaca ATCC 27029] gi|315411298|gb|ADU09415.1| transcriptional regulator, BadM/Rrf2 family [Micromonospora sp. L5] Length=156 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 81/154 (53%), Positives = 98/154 (64%), Gaps = 6/154 (3%) Query 1 MRMSAKAEYAVRAMVQLATAASGTV------VKTDDLAAAQGIPPQFLVDILTNLRTDRL 54 MR+SA+ +YA+RA +LA+ A G V + +A AQ IPP+FL IL LR + Sbjct 1 MRLSARVDYALRAAAELASVAVGGTTGRSRPVTAEQIARAQDIPPKFLESILLQLRRGGI 60 Query 55 VRSHRGREGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRAL 114 V + RG EGGY LARP EIS+A+V+R IDGPLA VR L Y G AL DVW AL Sbjct 61 VHAQRGPEGGYWLARPAGEISLAEVIRVIDGPLAHVRGQRPEQLGYQGAARALQDVWIAL 120 Query 115 RASMRSVLEETTLADVAGGALPEHVAQLADDYRA 148 RAS R +LE T+ADVA GALP V +LA D RA Sbjct 121 RASEREILELVTIADVAAGALPGRVNELAADPRA 154 >gi|145595671|ref|YP_001159968.1| Rrf2 family transcriptional regulator [Salinispora tropica CNB-440] gi|145305008|gb|ABP55590.1| transcriptional regulator, BadM/Rrf2 family [Salinispora tropica CNB-440] Length=200 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 81/154 (53%), Positives = 98/154 (64%), Gaps = 6/154 (3%) Query 1 MRMSAKAEYAVRAMVQLATAASGT------VVKTDDLAAAQGIPPQFLVDILTNLRTDRL 54 MR+SA+ +YA+RA+ +LA+A G V D +A AQ IPP+FL IL LR + Sbjct 45 MRLSARVDYALRAVAELASATGGVSTGRGRFVTADQIARAQEIPPKFLESILLQLRRGGV 104 Query 55 VRSHRGREGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRAL 114 V++ RG EGGY LARP EIS+A+V+R IDGPLA VR L Y G AL DVW AL Sbjct 105 VQAQRGPEGGYWLARPAGEISLAEVIRVIDGPLAHVRGQRPEQLGYHGAARALQDVWIAL 164 Query 115 RASMRSVLEETTLADVAGGALPEHVAQLADDYRA 148 RAS R +LE T+ADVA GALP V L D RA Sbjct 165 RASERQILELVTVADVADGALPARVTDLVADPRA 198 >gi|269127506|ref|YP_003300876.1| BadM/Rrf2 family transcriptional regulator [Thermomonospora curvata DSM 43183] gi|268312464|gb|ACY98838.1| transcriptional regulator, BadM/Rrf2 family [Thermomonospora curvata DSM 43183] Length=154 Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 78/151 (52%), Positives = 98/151 (65%), Gaps = 1/151 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MR+SA+ +YA+RA +LA A S T V LA +Q IPP+FL +IL LR LVRS RG Sbjct 1 MRLSARVDYALRAAAELAVAGS-TPVTAVQLAESQQIPPKFLENILGQLRRSGLVRSQRG 59 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 +GGY LA+P EIS+AD++R IDGPL VR + Y G L +VW ALRAS RS Sbjct 60 PDGGYWLAKPADEISLADIIRAIDGPLLGVRGERPEHVGYQGAARPLQEVWIALRASERS 119 Query 121 VLEETTLADVAGGALPEHVAQLADDYRAQES 151 +LE TLA +A G LP+ VA+L D A +S Sbjct 120 ILESVTLAHIAAGKLPDPVAELTKDPAAWQS 150 >gi|336322200|ref|YP_004602168.1| BadM/Rrf2 family transcriptional regulator [Cellvibrio gilvus ATCC 13127] gi|336105781|gb|AEI13600.1| transcriptional regulator, BadM/Rrf2 family [Cellvibrio gilvus ATCC 13127] Length=152 Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 78/151 (52%), Positives = 98/151 (65%), Gaps = 0/151 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MR+SAKA+YAVRA +LAT +G V + LAA QG+P FL IL +LR +V S RG Sbjct 1 MRVSAKADYAVRACAELATNPTGEPVAVETLAAGQGLPTSFLERILGDLRRGGVVVSVRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 R GGY+LARP +EI++ADV+R +GPL +VRD L Y G TAL DVW ALR S+R Sbjct 61 RSGGYKLARPASEITLADVMRATEGPLVTVRDERPPSLSYEGSATALLDVWVALRVSVRD 120 Query 121 VLEETTLADVAGGALPEHVAQLADDYRAQES 151 VL+E TL +A G LP V + A E+ Sbjct 121 VLDEVTLEALASGDLPAPVQAMLQRADAWEN 151 >gi|256389580|ref|YP_003111144.1| BadM/Rrf2 family transcriptional regulator family [Catenulispora acidiphila DSM 44928] gi|256355806|gb|ACU69303.1| transcriptional regulator, BadM/Rrf2 family [Catenulispora acidiphila DSM 44928] Length=151 Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 73/145 (51%), Positives = 97/145 (67%), Gaps = 1/145 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 M++SAKA+YAVR M++LA A +VK+ L QG+P +F+ IL LR L+RSHRG Sbjct 1 MQISAKADYAVRVMLELA-AHGPNLVKSTVLIDHQGLPRKFVESILVELRRADLIRSHRG 59 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 EGGY LARP + ISI V+R +DGPLA VR + + YS L+DVW A RA++R Sbjct 60 AEGGYTLARPASAISIGQVIRAVDGPLAEVRGLRPHETEYSNAAQHLSDVWVAARAALRK 119 Query 121 VLEETTLADVAGGALPEHVAQLADD 145 VL+ET+LA V G LP HV ++A+ Sbjct 120 VLDETSLAHVLSGKLPAHVRRMAES 144 >gi|226303826|ref|YP_002763784.1| Rrf2 family DNA-binding protein [Rhodococcus erythropolis PR4] gi|229492573|ref|ZP_04386376.1| transcriptional regulator, BadM/Rrf2 family [Rhodococcus erythropolis SK121] gi|226182941|dbj|BAH31045.1| putative Rrf2 family DNA-binding protein [Rhodococcus erythropolis PR4] gi|229320559|gb|EEN86377.1| transcriptional regulator, BadM/Rrf2 family [Rhodococcus erythropolis SK121] Length=151 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 73/148 (50%), Positives = 98/148 (67%), Gaps = 1/148 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 M ++AK +YAVR +V+LA A K + LA +Q IP +FL +L++LR LV S RG Sbjct 1 MHITAKVDYAVRTLVELA-AVGPDPAKAEFLAKSQVIPHKFLEAVLSDLRRGGLVNSRRG 59 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 +GGY LAR EI+IADV+R ++GPLAS+R D+ Y GP T L +VW A+R ++R+ Sbjct 60 PDGGYWLARSADEITIADVIRAVEGPLASIRGQRPEDVDYGGPATPLKEVWIAVRVNLRA 119 Query 121 VLEETTLADVAGGALPEHVAQLADDYRA 148 VLE TL DVAGG LPE + +L D A Sbjct 120 VLENVTLTDVAGGELPEFIHELTADPEA 147 >gi|302532532|ref|ZP_07284874.1| iron-sulfur cluster assembly transcription factor IscR [Streptomyces sp. C] gi|302441427|gb|EFL13243.1| iron-sulfur cluster assembly transcription factor IscR [Streptomyces sp. C] Length=152 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 72/142 (51%), Positives = 95/142 (67%), Gaps = 0/142 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MR+SA+A+YAVRA +QLA + +K + +A AQ IP +FL IL ++R LV S RG Sbjct 1 MRISARADYAVRAALQLAASQDDGPLKAEAIADAQEIPHKFLEGILNDMRRGGLVLSQRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 GGY LARP ISIADV+R +DGPL SVR + DL Y+GP +L +W ALRA++R Sbjct 61 GNGGYRLARPARSISIADVIRVVDGPLVSVRGVRPPDLSYTGPAESLLPLWIALRANVRE 120 Query 121 VLEETTLADVAGGALPEHVAQL 142 +L+ +LADVA LP V+ L Sbjct 121 ILDGVSLADVASSDLPAPVSAL 142 >gi|291441270|ref|ZP_06580660.1| transcriptional regulator [Streptomyces ghanaensis ATCC 14672] gi|291344165|gb|EFE71121.1| transcriptional regulator [Streptomyces ghanaensis ATCC 14672] Length=154 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 69/143 (49%), Positives = 97/143 (68%), Gaps = 0/143 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MR+SA+A+YAVRA +QLA + +K + ++ AQ IP +FL IL ++R LV S RG Sbjct 3 MRISARADYAVRAALQLAASRQDGPLKAEAISDAQDIPHKFLESILNDMRRGGLVHSRRG 62 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 GGY LA+P I+IADV+R +DGPL SVR + +L Y+GP +L +W ALR+++R Sbjct 63 GNGGYRLAKPAESITIADVIRTVDGPLVSVRGVRPPELSYTGPAESLLPLWIALRSNVRE 122 Query 121 VLEETTLADVAGGALPEHVAQLA 143 +LE +LADVA LP+ V+ LA Sbjct 123 ILEGVSLADVASAQLPDDVSALA 145 >gi|334338260|ref|YP_004543412.1| transcriptional regulator, BadM/Rrf2 family [Isoptericola variabilis 225] gi|334108628|gb|AEG45518.1| transcriptional regulator, BadM/Rrf2 family [Isoptericola variabilis 225] Length=152 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/145 (54%), Positives = 103/145 (72%), Gaps = 0/145 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MR+SAKA+YAVRA +LA A G V + LA AQG+P +FL IL++LR + +V S RG Sbjct 1 MRISAKADYAVRAAAELAAAGDGVPVPAEALARAQGVPHRFLEVILSDLRREGIVSSRRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 GGY LARP +E+++ADV+R +DGPL VRD DL Y G ++L VW ALRA++R+ Sbjct 61 ARGGYVLARPASEVTVADVVRAVDGPLVYVRDERPADLEYGGAASSLLHVWVALRANVRA 120 Query 121 VLEETTLADVAGGALPEHVAQLADD 145 VLE TLAD+A GA+P+ V +L +D Sbjct 121 VLEHVTLADLAAGAVPDVVRRLTED 145 >gi|117164556|emb|CAJ88102.1| putative transcriptional regulator [Streptomyces ambofaciens ATCC 23877] Length=152 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 70/144 (49%), Positives = 96/144 (67%), Gaps = 0/144 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MR+SA+A+YAVRA +QLA + +K + +A AQ IP +FL IL ++R LV S RG Sbjct 1 MRISARADYAVRAALQLAASRDDGPLKAEAIADAQDIPHKFLEGILNDMRRGGLVLSQRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 GGY LA+P ISIADV+R ++GPL SVR + +L Y+GP +L +W ALR+++R Sbjct 61 GNGGYRLAKPAESISIADVIRTVEGPLVSVRGVRPPELSYTGPAESLLPLWIALRSNVRE 120 Query 121 VLEETTLADVAGGALPEHVAQLAD 144 +LE +LADVA LP +V L D Sbjct 121 ILEGVSLADVASAQLPANVTALTD 144 >gi|111021140|ref|YP_704112.1| transcriptional regulator [Rhodococcus jostii RHA1] gi|110820670|gb|ABG95954.1| possible transcriptional regulator [Rhodococcus jostii RHA1] Length=165 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 73/150 (49%), Positives = 98/150 (66%), Gaps = 1/150 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 M ++AK +YAVR +++LA AA + K + LA +Q IP +FL +L +LR LV S RG Sbjct 1 MHITAKVDYAVRTLIELA-AAGPSPSKAEFLAQSQTIPHKFLEAVLADLRRGGLVNSRRG 59 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 +GGY LARP +I+IADV+R ++GPLASVR D+ Y GP L DVW A+R ++R+ Sbjct 60 PDGGYWLARPAEDITIADVIRTVEGPLASVRGERPEDVDYCGPAAKLQDVWIAVRVNLRA 119 Query 121 VLEETTLADVAGGALPEHVAQLADDYRAQE 150 VLE +LADVA G LP + L D A E Sbjct 120 VLENVSLADVANGQLPGFLTTLTSDPGAWE 149 >gi|226363500|ref|YP_002781282.1| Rrf2 family DNA-binding protein [Rhodococcus opacus B4] gi|226241989|dbj|BAH52337.1| putative Rrf2 family DNA-binding protein [Rhodococcus opacus B4] Length=165 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 73/150 (49%), Positives = 98/150 (66%), Gaps = 1/150 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 M ++AK +YAVR +++LA AA + K + LA +Q IP +FL +L +LR LV S RG Sbjct 1 MHITAKVDYAVRTLIELA-AAGPSPSKAEFLAQSQTIPHKFLEAVLADLRRGGLVNSRRG 59 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 +GGY LARP +I+IADV+R ++GPLASVR D+ Y GP L DVW A+R ++R+ Sbjct 60 PDGGYWLARPAEDITIADVIRTVEGPLASVRGERPEDVDYCGPAAKLQDVWIAVRVNLRA 119 Query 121 VLEETTLADVAGGALPEHVAQLADDYRAQE 150 VLE +LADVA G LP + L D A E Sbjct 120 VLENVSLADVANGQLPGFLGALTSDPGAWE 149 >gi|296131265|ref|YP_003638515.1| BadM/Rrf2 family transcriptional regulator [Cellulomonas flavigena DSM 20109] gi|296023080|gb|ADG76316.1| transcriptional regulator, BadM/Rrf2 family [Cellulomonas flavigena DSM 20109] Length=152 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 74/143 (52%), Positives = 93/143 (66%), Gaps = 0/143 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MR+SAKA+YAVRA +LA+ G V ++ LAA Q IP FL I+ +LR +V S RG Sbjct 1 MRVSAKADYAVRACAELASRPGGESVPSEVLAAGQDIPTSFLERIMGDLRRGGVVTSVRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 R GGY LARP EI++ADV+R +DGPL +VRD+ L Y G L DVW ALRAS+R Sbjct 61 RSGGYLLARPADEITVADVVRAVDGPLVTVRDVRPPGLTYEGSAAGLLDVWVALRASVRD 120 Query 121 VLEETTLADVAGGALPEHVAQLA 143 VL+ TL D+ LP V +LA Sbjct 121 VLDVVTLKDLVDRDLPAAVRELA 143 >gi|329934735|ref|ZP_08284776.1| putative transcriptional regulator of sulfate adenylyltransferase, Rrf2 family [Streptomyces griseoaurantiacus M045] gi|329305557|gb|EGG49413.1| putative transcriptional regulator of sulfate adenylyltransferase, Rrf2 family [Streptomyces griseoaurantiacus M045] Length=152 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 73/151 (49%), Positives = 98/151 (65%), Gaps = 0/151 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MR+SA+A+YAVRA+V+LA G VK + +A Q I +FL IL +LR LV S RG Sbjct 1 MRISARADYAVRAVVELAVRQGGGPVKAEAVAEVQDISHKFLEGILGDLRRGGLVASRRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 GGY LAR I++AD++R +DGP+ SVR L Y+GP L +W ALRA++R Sbjct 61 GNGGYRLAREAEAITVADIIRAVDGPIVSVRGERPTQLKYTGPAEPLLPLWIALRANVRE 120 Query 121 VLEETTLADVAGGALPEHVAQLADDYRAQES 151 VLE T+AD+A GALP V +LA+D A ++ Sbjct 121 VLEGVTVADLAAGALPAPVRRLAEDPAAWQN 151 >gi|291301253|ref|YP_003512531.1| BadM/Rrf2 family transcriptional regulator [Stackebrandtia nassauensis DSM 44728] gi|290570473|gb|ADD43438.1| transcriptional regulator, BadM/Rrf2 family [Stackebrandtia nassauensis DSM 44728] Length=149 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 73/145 (51%), Positives = 92/145 (64%), Gaps = 1/145 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MR+SA+ +YA+RA V+L T+ + + +A AQ IP +F IL LR L+ S RG Sbjct 1 MRLSARVDYALRAAVEL-TSVGEEWLSAEKVAGAQKIPGKFCESILLQLRRGGLIESRRG 59 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 +GG+ LARP EIS+ADV+R +DGPL VR + Y G AL DVW ALRAS R Sbjct 60 PDGGHRLARPAKEISLADVIRVVDGPLVGVRGQRPEHVDYDGTAAALRDVWIALRASERK 119 Query 121 VLEETTLADVAGGALPEHVAQLADD 145 +LE TLADVAGG LP V +LA D Sbjct 120 ILESVTLADVAGGKLPAAVRKLAAD 144 >gi|284046052|ref|YP_003396392.1| Rrf2 family/BadM/Rrf2 family transcriptional regulator/Rrf2 family [Conexibacter woesei DSM 14684] gi|283950273|gb|ADB53017.1| transcriptional regulator, BadM/Rrf2 family [Conexibacter woesei DSM 14684] Length=152 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 72/139 (52%), Positives = 92/139 (67%), Gaps = 0/139 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MR+SAK +YAVRA V+LA +K++ +A AQ IP +FL +IL LR +V S RG Sbjct 1 MRISAKTDYAVRAAVELAAVTDEHPLKSERIATAQEIPLRFLENILVQLRQGGIVVSRRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 EGGY LA P EI++ADV+R IDGPLA+V L + G L +VW A+RAS+R Sbjct 61 AEGGYRLALPPEEITVADVIRAIDGPLAAVSGERPEKLDFHGTAEPLREVWVAVRASLRD 120 Query 121 VLEETTLADVAGGALPEHV 139 VLE TLAD+A GALP+ V Sbjct 121 VLEHVTLADLASGALPDAV 139 >gi|256392947|ref|YP_003114511.1| BadM/Rrf2 family transcriptional regulator family [Catenulispora acidiphila DSM 44928] gi|256359173|gb|ACU72670.1| transcriptional regulator, BadM/Rrf2 family [Catenulispora acidiphila DSM 44928] Length=151 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 72/144 (50%), Positives = 92/144 (64%), Gaps = 1/144 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 M +SAKA+YAVR M++LA G VVK + Q +P +F+ IL LR LVRSHRG Sbjct 1 MHISAKADYAVRVMLELAAHGPG-VVKASVVIDHQDLPRKFIEAILVELRRADLVRSHRG 59 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 +GGY LARP ISI V+R +DGPLA VR + + Y+G L D W A RA++R Sbjct 60 ADGGYTLARPAAAISIGSVVRAVDGPLAEVRGLRPHETEYAGAAEHLADCWVAARAALRK 119 Query 121 VLEETTLADVAGGALPEHVAQLAD 144 VL+ET+LA V G LP HV +LA+ Sbjct 120 VLDETSLAQVLDGRLPAHVRRLAE 143 >gi|297559632|ref|YP_003678606.1| BadM/Rrf2 family transcriptional regulator [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844080|gb|ADH66100.1| transcriptional regulator, BadM/Rrf2 family [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length=154 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 75/154 (49%), Positives = 95/154 (62%), Gaps = 1/154 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MR+SA+ +YA+RA +LA A G V + LA AQ IP +FL +ILT LR LVRS RG Sbjct 1 MRLSARVDYALRAAAELAVADEGPVT-AEQLARAQAIPGKFLENILTQLRRAGLVRSQRG 59 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 GGY LARP EIS+AD++R +DGPLA+VR + Y G +L VW ALRAS R+ Sbjct 60 PVGGYWLARPAGEISLADIIRAVDGPLANVRGERPEHVDYDGAARSLQQVWIALRASERA 119 Query 121 VLEETTLADVAGGALPEHVAQLADDYRAQESTRH 154 +LE L + LPE V LA+D A + H Sbjct 120 ILEGVNLQHLVTNELPETVRSLAEDPEAWVNHTH 153 >gi|332668756|ref|YP_004451763.1| BadM/Rrf2 family transcriptional regulator [Cellulomonas fimi ATCC 484] gi|332337793|gb|AEE44376.1| transcriptional regulator, BadM/Rrf2 family [Cellulomonas fimi ATCC 484] Length=152 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 72/151 (48%), Positives = 96/151 (64%), Gaps = 0/151 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MR+SAKA+YAVRA +LA + G V ++ LAA Q IP FL IL +LR +V S RG Sbjct 1 MRVSAKADYAVRACAELAASPHGDPVPSEVLAAGQDIPVSFLERILGDLRRAGIVASVRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 R GGY LARP ++++A+V+R +DGPL +VRD L Y G AL DVW ALR ++R Sbjct 61 RSGGYRLARPAGDVTLAEVIRAVDGPLVTVRDERPPSLTYEGSAAALLDVWVALRTNVRQ 120 Query 121 VLEETTLADVAGGALPEHVAQLADDYRAQES 151 VL+ TLA + G LP V L++ A ++ Sbjct 121 VLDVVTLAHLVAGDLPPQVKALSETVGAWDN 151 >gi|290960745|ref|YP_003491927.1| transcriptional regulator [Streptomyces scabiei 87.22] gi|260650271|emb|CBG73387.1| putative transcriptional regulator [Streptomyces scabiei 87.22] Length=152 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 72/151 (48%), Positives = 97/151 (65%), Gaps = 0/151 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MR+SA+A+YAVRA++++A G VK + +A Q IP +FL IL +LR LV S RG Sbjct 1 MRISARADYAVRAVLEVAVRQDGGPVKAEVIATVQEIPHKFLEGILGDLRRGGLVTSRRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 GGY LAR I++ADV+R +DGP+ SVR L Y+G L +W ALRA++R Sbjct 61 GSGGYRLAREPAAITVADVIRAVDGPIVSVRGERPTGLTYTGSAEPLLPLWIALRANVRR 120 Query 121 VLEETTLADVAGGALPEHVAQLADDYRAQES 151 +LE T+AD+A GALPE V LA + A E+ Sbjct 121 ILEGVTVADIAAGALPEPVRNLAAEPAAWEN 151 >gi|117929268|ref|YP_873819.1| BadM/Rrf2 family transcriptional regulator [Acidothermus cellulolyticus 11B] gi|117649731|gb|ABK53833.1| transcriptional regulator, BadM/Rrf2 family [Acidothermus cellulolyticus 11B] Length=156 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 70/145 (49%), Positives = 95/145 (66%), Gaps = 3/145 (2%) Query 1 MRMSAKAEYAVRAMVQLATAA---SGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRS 57 M +SAK +YA+RAM+ LA AA + VK +++A Q +P +FL IL +LR RLV S Sbjct 1 MHISAKTDYAMRAMLVLAHAARERADAWVKAEEIADEQRLPRKFLEAILADLRRARLVES 60 Query 58 HRGREGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRAS 117 RG EGGY LA+P + I +ADV+R +DGPLA VR + ++ Y G L DVW A+RA Sbjct 61 LRGAEGGYRLAKPASAIYVADVMRAVDGPLAEVRGLRPENVRYEGAAAGLQDVWVAVRAG 120 Query 118 MRSVLEETTLADVAGGALPEHVAQL 142 +R+VLE ++ DVA ALP+ V L Sbjct 121 LRAVLERVSVEDVANRALPKPVQDL 145 >gi|345012713|ref|YP_004815067.1| BadM/Rrf2 family transcriptional regulator [Streptomyces violaceusniger Tu 4113] gi|344039062|gb|AEM84787.1| transcriptional regulator, BadM/Rrf2 family [Streptomyces violaceusniger Tu 4113] Length=152 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 78/148 (53%), Positives = 100/148 (68%), Gaps = 0/148 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MR+SAKA+YAVRA ++LA A + T VK + +A AQGIP +FL IL +LR LV S RG Sbjct 1 MRISAKADYAVRAALELAAAGADTSVKAEVIAGAQGIPHKFLEGILGDLRRGGLVASQRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 GGY LARP ISIA+V+R +DGPL SVR + +L Y GP +L +W A+RA++R Sbjct 61 GNGGYRLARPADTISIAEVIRVVDGPLVSVRGVRPPELSYCGPAESLLPLWIAVRANVRK 120 Query 121 VLEETTLADVAGGALPEHVAQLADDYRA 148 +L E TLA+VA LP V LA+D A Sbjct 121 ILGEVTLAEVAAARLPGDVLGLAEDPEA 148 >gi|29832300|ref|NP_826934.1| transcriptional regulator [Streptomyces avermitilis MA-4680] gi|29609419|dbj|BAC73469.1| putative transcriptional regulator [Streptomyces avermitilis MA-4680] Length=152 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 73/151 (49%), Positives = 97/151 (65%), Gaps = 0/151 (0%) Query 1 MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG 60 MR+SA+A+YAVRA+++LA VK + +AAAQ IP +FL IL +LR LV S RG Sbjct 1 MRISARADYAVRAVLELAVREDDGPVKAEAIAAAQDIPHKFLEGILGDLRRGGLVASRRG 60 Query 61 REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS 120 GGY LAR I++ADV+R +DGP+ SVR L Y+G L +W ALRA++R Sbjct 61 GNGGYRLARAADTITVADVIRAVDGPIVSVRGERPTGLTYTGSAEPLLPLWVALRANVRK 120 Query 121 VLEETTLADVAGGALPEHVAQLADDYRAQES 151 +LE TLAD+A ALP V +LA + A E+ Sbjct 121 ILEGVTLADIAADALPAPVRELAAEPAAWEN 151 >gi|294629169|ref|ZP_06707729.1| Rrf2 family protein [Streptomyces sp. e14] gi|292832502|gb|EFF90851.1| Rrf2 family protein [Streptomyces sp. e14] Length=155 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 74/154 (49%), Positives = 99/154 (65%), Gaps = 3/154 (1%) Query 1 MRMSAKAEYAVRAMVQLATA---ASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRS 57 MR+SA+A+YAVRA+++LA A VK + +AA QGI +FL IL +LR +V S Sbjct 1 MRISARADYAVRAVLELAVRHGDAPEAPVKAETIAAEQGISHKFLEGILGDLRRAGVVTS 60 Query 58 HRGREGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRAS 117 RG GGY LARP + I++ADV+R +DGP+ SVR L Y+G L +W ALRA+ Sbjct 61 RRGGGGGYALARPASAITVADVIRAVDGPIVSVRGERPTGLTYTGSAEPLLPLWIALRAN 120 Query 118 MRSVLEETTLADVAGGALPEHVAQLADDYRAQES 151 +R +LE TLAD+A G LPE V LA + A E+ Sbjct 121 VRRILEGVTLADIATGTLPEEVRSLAAEPGAWEN 154 >gi|269956765|ref|YP_003326554.1| BadM/Rrf2 family transcriptional regulator [Xylanimonas cellulosilytica DSM 15894] gi|269305446|gb|ACZ30996.1| transcriptional regulator, BadM/Rrf2 family [Xylanimonas cellulosilytica DSM 15894] Length=168 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 73/157 (47%), Positives = 97/157 (62%), Gaps = 3/157 (1%) Query 1 MRMSAKAEYAVRAMVQLATAASGT-VVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHR 59 MR++AK +YAVR V+LA G K+D+LA AQ IP +++ IL +L+ LV + R Sbjct 1 MRITAKIDYAVRLCVELAARYDGGGYAKSDELATAQQIPANYVLGILNSLKQTGLVETRR 60 Query 60 GREGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMR 119 G +GG LA +I++ADV+R IDGPLASV + D+ Y G + + DVW ALR +MR Sbjct 61 GADGGARLASDPAQIAVADVIRAIDGPLASVGGRNVEDVSYPGSSAPVRDVWVALRCAMR 120 Query 120 SVLEETTLADVAGGALPEHVAQL--ADDYRAQESTRH 154 SVLE TLADV GA+P V +L DD RH Sbjct 121 SVLEVVTLADVLAGAMPAPVQELLATDDAWRTRPNRH 157 Lambda K H 0.317 0.132 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 131112251088 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40