BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1291c
Length=111
Score E
Sequences producing significant alignments: (Bits) Value
gi|289745037|ref|ZP_06504415.1| hypothetical protein TBBG_02183 ... 215 2e-54
gi|15608431|ref|NP_215807.1| hypothetical protein Rv1291c [Mycob... 215 2e-54
gi|167969616|ref|ZP_02551893.1| conserved hypothetical secreted ... 215 2e-54
gi|289753368|ref|ZP_06512746.1| conserved hypothetical protein [... 213 5e-54
gi|183984092|ref|YP_001852383.1| hypothetical protein MMAR_4121 ... 167 5e-40
gi|254231549|ref|ZP_04924876.1| conserved hypothetical secreted ... 158 2e-37
gi|118619190|ref|YP_907522.1| hypothetical protein MUL_3987 [Myc... 157 4e-37
gi|240169525|ref|ZP_04748184.1| hypothetical secreted protein [M... 143 9e-33
gi|336458546|gb|EGO37514.1| Protein of unknown function (DUF732)... 77.4 6e-13
gi|118462738|ref|YP_880661.1| hypothetical protein MAV_1419 [Myc... 77.4 7e-13
gi|41408599|ref|NP_961435.1| hypothetical protein MAP2501 [Mycob... 77.4 7e-13
gi|254774297|ref|ZP_05215813.1| hypothetical protein MaviaA2_064... 77.0 8e-13
gi|15840718|ref|NP_335755.1| hypothetical protein MT1309 [Mycoba... 62.8 2e-08
gi|15608411|ref|NP_215787.1| hypothetical protein Rv1271c [Mycob... 62.4 2e-08
gi|183984122|ref|YP_001852413.1| hypothetical protein MMAR_4151 ... 61.2 5e-08
gi|15840740|ref|NP_335777.1| hypothetical protein MT1330 [Mycoba... 60.8 7e-08
gi|342858084|ref|ZP_08714740.1| hypothetical protein MCOL_04380 ... 60.8 7e-08
gi|118618469|ref|YP_906801.1| hypothetical protein MUL_3086 [Myc... 60.5 8e-08
gi|183983439|ref|YP_001851730.1| hypothetical protein MMAR_3450 ... 60.1 1e-07
gi|296164252|ref|ZP_06846842.1| conserved hypothetical protein [... 58.9 2e-07
gi|296164250|ref|ZP_06846841.1| conserved hypothetical protein [... 58.5 3e-07
gi|118618176|ref|YP_906508.1| hypothetical protein MUL_2724 [Myc... 58.5 3e-07
gi|240173096|ref|ZP_04751754.1| hypothetical protein MkanA1_2753... 58.2 4e-07
gi|118619213|ref|YP_907545.1| hypothetical protein MUL_4014 [Myc... 58.2 5e-07
gi|254776404|ref|ZP_05217920.1| hypothetical protein MaviaA2_172... 57.4 8e-07
gi|118619212|ref|YP_907544.1| hypothetical protein MUL_4013 [Myc... 55.5 2e-06
gi|254821156|ref|ZP_05226157.1| hypothetical protein MintA_14562... 55.5 2e-06
gi|240171347|ref|ZP_04750006.1| hypothetical protein MkanA1_1869... 55.5 3e-06
gi|296169915|ref|ZP_06851526.1| conserved hypothetical protein [... 55.5 3e-06
gi|254820682|ref|ZP_05225683.1| hypothetical protein MintA_12176... 54.7 5e-06
gi|254818543|ref|ZP_05223544.1| hypothetical protein MintA_01396... 54.3 6e-06
gi|336459289|gb|EGO38233.1| Protein of unknown function (DUF732)... 53.9 7e-06
gi|342239958|gb|AEL19963.1| gp41 [Mycobacterium phage Charlie] 53.5 9e-06
gi|41409256|ref|NP_962092.1| hypothetical protein MAP3158c [Myco... 53.5 1e-05
gi|336459617|gb|EGO38552.1| Protein of unknown function (DUF732)... 53.1 1e-05
gi|342861513|ref|ZP_08718160.1| hypothetical protein MCOL_21611 ... 53.1 1e-05
gi|118466072|ref|YP_883411.1| hypothetical protein MAV_4271 [Myc... 52.8 2e-05
gi|41409516|ref|NP_962352.1| hypothetical protein MAP3418 [Mycob... 52.4 2e-05
gi|41407621|ref|NP_960457.1| hypothetical protein MAP1523 [Mycob... 52.0 3e-05
gi|183982693|ref|YP_001850984.1| hypothetical protein MMAR_2686 ... 51.6 4e-05
gi|240173138|ref|ZP_04751796.1| hypothetical protein MkanA1_2774... 50.8 7e-05
gi|118618631|ref|YP_906963.1| hypothetical protein MUL_3300 [Myc... 50.8 7e-05
gi|41408883|ref|NP_961719.1| hypothetical protein MAP2785c [Myco... 50.4 8e-05
gi|254775999|ref|ZP_05217515.1| hypothetical protein MaviaA2_152... 50.1 1e-04
gi|118465355|ref|YP_882735.1| hypothetical protein MAV_3557 [Myc... 50.1 1e-04
gi|296169238|ref|ZP_06850891.1| conserved hypothetical protein [... 49.7 1e-04
gi|41407615|ref|NP_960451.1| hypothetical protein MAP1517 [Mycob... 49.7 1e-04
gi|336457566|gb|EGO36571.1| Protein of unknown function (DUF732)... 49.7 2e-04
gi|118467287|ref|YP_882098.1| hypothetical protein MAV_2912 [Myc... 49.3 2e-04
gi|342858464|ref|ZP_08715119.1| hypothetical protein MCOL_06301 ... 49.3 2e-04
>gi|289745037|ref|ZP_06504415.1| hypothetical protein TBBG_02183 [Mycobacterium tuberculosis 02_1987]
gi|289757391|ref|ZP_06516769.1| hypothetical protein TBEG_03838 [Mycobacterium tuberculosis T85]
gi|289685565|gb|EFD53053.1| hypothetical protein TBBG_02183 [Mycobacterium tuberculosis 02_1987]
gi|289712955|gb|EFD76967.1| hypothetical protein TBEG_03838 [Mycobacterium tuberculosis T85]
Length=162
Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/111 (100%), Positives = 111/111 (100%), Gaps = 0/111 (0%)
Query 1 MFTRRFAASMVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKD 60
MFTRRFAASMVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKD
Sbjct 52 MFTRRFAASMVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKD 111
Query 61 AHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS 111
AHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS
Sbjct 112 AHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS 162
>gi|15608431|ref|NP_215807.1| hypothetical protein Rv1291c [Mycobacterium tuberculosis H37Rv]
gi|31792484|ref|NP_854977.1| hypothetical protein Mb1323c [Mycobacterium bovis AF2122/97]
gi|121637220|ref|YP_977443.1| hypothetical protein BCG_1351c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
71 more sequence titles
Length=111
Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/111 (100%), Positives = 111/111 (100%), Gaps = 0/111 (0%)
Query 1 MFTRRFAASMVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKD 60
MFTRRFAASMVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKD
Sbjct 1 MFTRRFAASMVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKD 60
Query 61 AHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS 111
AHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS
Sbjct 61 AHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS 111
>gi|167969616|ref|ZP_02551893.1| conserved hypothetical secreted protein [Mycobacterium tuberculosis
H37Ra]
Length=168
Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/111 (100%), Positives = 111/111 (100%), Gaps = 0/111 (0%)
Query 1 MFTRRFAASMVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKD 60
MFTRRFAASMVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKD
Sbjct 1 MFTRRFAASMVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKD 60
Query 61 AHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS 111
AHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS
Sbjct 61 AHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS 111
>gi|289753368|ref|ZP_06512746.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289693955|gb|EFD61384.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=111
Score = 213 bits (543), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 110/111 (99%), Positives = 110/111 (99%), Gaps = 0/111 (0%)
Query 1 MFTRRFAASMVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKD 60
MFTRRFAASMVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPP AARAIKD
Sbjct 1 MFTRRFAASMVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPRAARAIKD 60
Query 61 AHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS 111
AHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS
Sbjct 61 AHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS 111
>gi|183984092|ref|YP_001852383.1| hypothetical protein MMAR_4121 [Mycobacterium marinum M]
gi|183177418|gb|ACC42528.1| conserved hypothetical secreted protein [Mycobacterium marinum
M]
Length=113
Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/113 (80%), Positives = 102/113 (91%), Gaps = 2/113 (1%)
Query 1 MFTRRFAASMVGTTLTAATLGLAALGFAGTASASST--DEAFLAQLQADGITPPSAARAI 58
MFTRRFAAS+ GTTLTAA+LGLAALGFA TA+AS+ D+AFLAQ+QADGITPPSAARAI
Sbjct 1 MFTRRFAASLAGTTLTAASLGLAALGFAATATASAGSTDDAFLAQIQADGITPPSAARAI 60
Query 59 KDAHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS 111
DAHAVC ALDEG+S VI AVA++TGLS+KGAKTFA+DAASAYCP+YVTSS
Sbjct 61 SDAHAVCTALDEGNSPTTVINAVAESTGLSSKGAKTFAIDAASAYCPEYVTSS 113
>gi|254231549|ref|ZP_04924876.1| conserved hypothetical secreted protein [Mycobacterium tuberculosis
C]
gi|124600608|gb|EAY59618.1| conserved hypothetical secreted protein [Mycobacterium tuberculosis
C]
Length=119
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/99 (87%), Positives = 86/99 (87%), Gaps = 5/99 (5%)
Query 18 ATLGLAALGFAGTA-----SASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGH 72
A L L LG T SASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGH
Sbjct 21 APLELPPLGPGRTRLRRNRSASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGH 80
Query 73 SAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS 111
SAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS
Sbjct 81 SAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS 119
>gi|118619190|ref|YP_907522.1| hypothetical protein MUL_3987 [Mycobacterium ulcerans Agy99]
gi|118571300|gb|ABL06051.1| conserved hypothetical secreted protein [Mycobacterium ulcerans
Agy99]
Length=113
Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/113 (81%), Positives = 103/113 (92%), Gaps = 2/113 (1%)
Query 1 MFTRRFAASMVGTTLTAATLGLAALGFAGTASAS--STDEAFLAQLQADGITPPSAARAI 58
MFTRRFAAS+ GTTLTAA+LGLAALGFA TA+A+ STD+AFLAQ+QADGITPPSAARAI
Sbjct 1 MFTRRFAASLAGTTLTAASLGLAALGFAATATATAGSTDDAFLAQIQADGITPPSAARAI 60
Query 59 KDAHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS 111
DAHAVC ALDEG+S VI AVA++TGLS+KGAKTFA+DAASAYCP+YVTSS
Sbjct 61 SDAHAVCTALDEGNSPTTVINAVAESTGLSSKGAKTFAIDAASAYCPEYVTSS 113
>gi|240169525|ref|ZP_04748184.1| hypothetical secreted protein [Mycobacterium kansasii ATCC 12478]
Length=111
Score = 143 bits (360), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 90/110 (82%), Positives = 98/110 (90%), Gaps = 0/110 (0%)
Query 1 MFTRRFAASMVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKD 60
MFTRRFA M G LTAATLGLAALG AG ASA+S D+AFLAQL+ADGITPP+AARAI +
Sbjct 1 MFTRRFAGPMAGAALTAATLGLAALGSAGAASANSVDDAFLAQLKADGITPPTAARAISE 60
Query 61 AHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTS 110
AHAVC ALDEGHSAK VI AVA++TGLSAKGAKTFA+DAASAYCPQYVTS
Sbjct 61 AHAVCTALDEGHSAKEVINAVAESTGLSAKGAKTFAIDAASAYCPQYVTS 110
>gi|336458546|gb|EGO37514.1| Protein of unknown function (DUF732) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=110
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 63/110 (58%), Gaps = 7/110 (6%)
Query 1 MFTRRFAASMVGTTLTAATLGLAALGFAGTASASST---DEAFLAQLQADGITPPSAARA 57
MF+RR ++ TAA +GLAA+G AG A+A + DE FLAQ+++ G++ PS A
Sbjct 1 MFSRR----IITVLTTAAAIGLAAVGLAGPAAARTVQTGDEMFLAQMRSLGVSFPSPQEA 56
Query 58 IKDAHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQY 107
+++ H VC L G + AV AV + T L+ A A AYCPQ+
Sbjct 57 VREGHQVCAELSAGKTPTAVTVAVFRQTNLTPPQAAGLVTAATQAYCPQF 106
>gi|118462738|ref|YP_880661.1| hypothetical protein MAV_1419 [Mycobacterium avium 104]
gi|118164025|gb|ABK64922.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=110
Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 62/110 (57%), Gaps = 8/110 (7%)
Query 1 MFTRRFAASMVGTTLTAATLGLAALGFAGTASASST---DEAFLAQLQADGITPPSAARA 57
MF+RR + T L A +GLAA+G AG A+A + DE FLAQ+++ G++ PS A
Sbjct 1 MFSRR-----IITVLITAAIGLAAVGLAGPAAARTVQTGDEMFLAQMRSLGVSFPSPQEA 55
Query 58 IKDAHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQY 107
+++ H VC L G + AV AV + T L+ A A AYCPQ+
Sbjct 56 VREGHQVCAELSAGKTPTAVTVAVFRQTNLTPPQAAGLVTAATQAYCPQF 105
>gi|41408599|ref|NP_961435.1| hypothetical protein MAP2501 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396957|gb|AAS04818.1| hypothetical protein MAP_2501 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=114
Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 63/110 (58%), Gaps = 7/110 (6%)
Query 1 MFTRRFAASMVGTTLTAATLGLAALGFAGTASASST---DEAFLAQLQADGITPPSAARA 57
MF+RR ++ TAA +GLAA+G AG A+A + DE FLAQ+++ G++ PS A
Sbjct 4 MFSRR----IITVLTTAAAIGLAAVGLAGPAAARTVQTGDEMFLAQMRSLGVSFPSPQEA 59
Query 58 IKDAHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQY 107
+++ H VC L G + AV AV + T L+ A A AYCPQ+
Sbjct 60 VREGHQVCAELSAGKTPTAVTVAVFRQTNLTPPQAAGLVTAATQAYCPQF 109
>gi|254774297|ref|ZP_05215813.1| hypothetical protein MaviaA2_06470 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=111
Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 63/110 (58%), Gaps = 7/110 (6%)
Query 1 MFTRRFAASMVGTTLTAATLGLAALGFAGTASASST---DEAFLAQLQADGITPPSAARA 57
MF+RR ++ TAA +GLAA+G AG A+A + DE FLAQ+++ G++ PS A
Sbjct 1 MFSRR----IITVLTTAAAIGLAAVGLAGPAAARAVQTGDEMFLAQMRSLGVSFPSPQEA 56
Query 58 IKDAHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQY 107
+++ H VC L G + AV AV + T L+ A A AYCPQ+
Sbjct 57 VREGHQVCAELSAGKTPTAVTVAVFRQTNLTPPQAAGLVTAATQAYCPQF 106
>gi|15840718|ref|NP_335755.1| hypothetical protein MT1309 [Mycobacterium tuberculosis CDC1551]
gi|13880908|gb|AAK45569.1| hypothetical protein MT1309 [Mycobacterium tuberculosis CDC1551]
Length=115
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/92 (39%), Positives = 50/92 (55%), Gaps = 4/92 (4%)
Query 20 LGLAALGFAGTASA----SSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAK 75
+G AA+G A + ++ DEAF+AQ+++ G+T S A + A VC L G +
Sbjct 19 VGAAAIGLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGT 78
Query 76 AVIKAVAKATGLSAKGAKTFAVDAASAYCPQY 107
+ + V T L+ K A F VDA AYCPQY
Sbjct 79 EIAEEVLSQTNLTTKQAAYFVVDATKAYCPQY 110
>gi|15608411|ref|NP_215787.1| hypothetical protein Rv1271c [Mycobacterium tuberculosis H37Rv]
gi|31792463|ref|NP_854956.1| hypothetical protein Mb1302c [Mycobacterium bovis AF2122/97]
gi|121637199|ref|YP_977422.1| hypothetical protein BCG_1330c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
80 more sequence titles
Length=113
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/92 (39%), Positives = 50/92 (55%), Gaps = 4/92 (4%)
Query 20 LGLAALGFAGTASA----SSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAK 75
+G AA+G A + ++ DEAF+AQ+++ G+T S A + A VC L G +
Sbjct 17 VGAAAIGLAVATAGTAGANTKDEAFIAQMESIGVTFSSPQVATQQAQLVCKKLASGETGT 76
Query 76 AVIKAVAKATGLSAKGAKTFAVDAASAYCPQY 107
+ + V T L+ K A F VDA AYCPQY
Sbjct 77 EIAEEVLSQTNLTTKQAAYFVVDATKAYCPQY 108
>gi|183984122|ref|YP_001852413.1| hypothetical protein MMAR_4151 [Mycobacterium marinum M]
gi|183177448|gb|ACC42558.1| conserved hypothetical secreted protein [Mycobacterium marinum
M]
Length=110
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/74 (37%), Positives = 40/74 (55%), Gaps = 0/74 (0%)
Query 34 SSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAKAVIKAVAKATGLSAKGAK 93
S+ DE F+AQ++ G+T S A++ H VC L G + + + + T L+ K A
Sbjct 32 STGDETFIAQMKGVGVTFSSTQSAVRQGHQVCQELASGKTGTDIAEEILSQTNLTTKQAA 91
Query 94 TFAVDAASAYCPQY 107
F VDA YCP+Y
Sbjct 92 YFVVDATKVYCPEY 105
>gi|15840740|ref|NP_335777.1| hypothetical protein MT1330 [Mycobacterium tuberculosis CDC1551]
gi|13880931|gb|AAK45591.1| hypothetical protein MT1330 [Mycobacterium tuberculosis CDC1551]
Length=31
Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/31 (97%), Positives = 31/31 (100%), Gaps = 0/31 (0%)
Query 81 VAKATGLSAKGAKTFAVDAASAYCPQYVTSS 111
+AKATGLSAKGAKTFAVDAASAYCPQYVTSS
Sbjct 1 MAKATGLSAKGAKTFAVDAASAYCPQYVTSS 31
>gi|342858084|ref|ZP_08714740.1| hypothetical protein MCOL_04380 [Mycobacterium colombiense CECT
3035]
gi|342135417|gb|EGT88583.1| hypothetical protein MCOL_04380 [Mycobacterium colombiense CECT
3035]
Length=114
Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/110 (42%), Positives = 65/110 (60%), Gaps = 4/110 (3%)
Query 1 MFTRRFAASMVGTTLTAATLGLAALGFAGTASASST---DEAFLAQLQADGITPPSAARA 57
MF+RR ++ T + AA +GLAA+G AGTA+ASS D+AFL+Q+Q+ G+T PS A
Sbjct 1 MFSRR-ITTIATTAIGAAAIGLAAVGMAGTAAASSVQTADQAFLSQMQSLGVTFPSTQDA 59
Query 58 IKDAHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQY 107
++ H VC L G + AV + + T L+ A A AYCPQ+
Sbjct 60 VRAGHQVCTDLSAGQTPIAVTVQIFRHTHLTPPQAAGVVNAATIAYCPQF 109
>gi|118618469|ref|YP_906801.1| hypothetical protein MUL_3086 [Mycobacterium ulcerans Agy99]
gi|183982679|ref|YP_001850970.1| hypothetical protein MMAR_2672 [Mycobacterium marinum M]
gi|118570579|gb|ABL05330.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
gi|183176005|gb|ACC41115.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=106
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/99 (38%), Positives = 50/99 (51%), Gaps = 1/99 (1%)
Query 10 MVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPP-SAARAIKDAHAVCDAL 68
M+ L A L LG TA A + D+ FL++LQ++GIT S + AI AH VC L
Sbjct 1 MLKRLLVVAIALLGPLGTVATAHADNNDDRFLSELQSEGITDHISPSHAILAAHIVCQKL 60
Query 69 DEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQY 107
D G + V V ++ + + F A AYCPQY
Sbjct 61 DSGMTPTEVAYDVLNSSSMPGYHSGYFVGAAIDAYCPQY 99
>gi|183983439|ref|YP_001851730.1| hypothetical protein MMAR_3450 [Mycobacterium marinum M]
gi|183176765|gb|ACC41875.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=99
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/95 (44%), Positives = 52/95 (55%), Gaps = 2/95 (2%)
Query 15 LTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSA 74
+ AA + A + AG A A D FL LQ GIT PS A+AI A AVC LD G S
Sbjct 3 VCAAVVFGAPVWVAGVARAGD-DVGFLVALQRIGITYPSPAQAIDAARAVCVCLDRGESG 61
Query 75 KAVIKAV-AKATGLSAKGAKTFAVDAASAYCPQYV 108
AV++ V A+ G A FAV +A+ YCP ++
Sbjct 62 LAVVQEVTARNPGFDMDAAAHFAVISATYYCPHHL 96
>gi|296164252|ref|ZP_06846842.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900391|gb|EFG79807.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=105
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/99 (41%), Positives = 51/99 (52%), Gaps = 0/99 (0%)
Query 9 SMVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDAL 68
S V T+ L AAL FA ASA TD+ FLA L+ GI + AI H VC L
Sbjct 2 SCVKWLATSVILLAAALQFATPASADQTDDDFLAALKKHGIVFANRDAAIATGHRVCTGL 61
Query 69 DEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQY 107
D + ++ ++ K T LSA A F A ++YCPQY
Sbjct 62 DADQTPANLVLSLVKDTDLSAHVAGYFFGAAVNSYCPQY 100
>gi|296164250|ref|ZP_06846841.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900406|gb|EFG79821.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=96
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/85 (44%), Positives = 46/85 (55%), Gaps = 0/85 (0%)
Query 23 AALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAKAVIKAVA 82
AAL FA ASA TD+ FLA L+ GI + AI H VC LD + +I ++
Sbjct 7 AALQFATPASADQTDDDFLAALKKHGIVFTNRDAAIATGHRVCTGLDADQTPANLILSLV 66
Query 83 KATGLSAKGAKTFAVDAASAYCPQY 107
K T LSA A F A ++YCPQY
Sbjct 67 KDTDLSAHVAGYFFGAAVNSYCPQY 91
>gi|118618176|ref|YP_906508.1| hypothetical protein MUL_2724 [Mycobacterium ulcerans Agy99]
gi|118570286|gb|ABL05037.1| conserved hypothetical membrane protein [Mycobacterium ulcerans
Agy99]
Length=99
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/95 (43%), Positives = 51/95 (54%), Gaps = 2/95 (2%)
Query 15 LTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSA 74
+ AA + A + AG A A D FL LQ GIT PS A+AI A AVC LD G S
Sbjct 3 VCAAVVFGAPVWVAGVARAGD-DVGFLVALQRIGITYPSPAQAIDAARAVCVCLDRGESG 61
Query 75 KAVIKAV-AKATGLSAKGAKTFAVDAASAYCPQYV 108
AV++ V A+ G A FAV + + YCP ++
Sbjct 62 LAVVQEVTARNPGFDMDAAAHFAVISTTYYCPHHL 96
>gi|240173096|ref|ZP_04751754.1| hypothetical protein MkanA1_27536 [Mycobacterium kansasii ATCC
12478]
Length=110
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/90 (44%), Positives = 48/90 (54%), Gaps = 2/90 (2%)
Query 21 GLAALGFAGTASASSTDEA-FLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAKAVIK 79
GLAA A S D+A FLA LQ GIT PS A AI A AVC LD G + V+
Sbjct 18 GLAAPAHADPQGPSGGDDAGFLAALQQAGITYPSPAAAIGSAQAVCGCLDNGEAGLEVVH 77
Query 80 AV-AKATGLSAKGAKTFAVDAASAYCPQYV 108
V + G + + A FAV +A YCP ++
Sbjct 78 EVKVRNPGFNMEAASQFAVISAKYYCPHHL 107
>gi|118619213|ref|YP_907545.1| hypothetical protein MUL_4014 [Mycobacterium ulcerans Agy99]
gi|118571323|gb|ABL06074.1| conserved hypothetical secreted protein [Mycobacterium ulcerans
Agy99]
Length=110
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/74 (36%), Positives = 39/74 (53%), Gaps = 0/74 (0%)
Query 34 SSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAKAVIKAVAKATGLSAKGAK 93
S+ DE F+AQ++ G+T S A++ H VC G + + + + T L+ K A
Sbjct 32 STGDETFIAQMKGVGVTFSSTQSAVRQGHQVCQESASGKTGTDIAEEILSQTNLTTKQAA 91
Query 94 TFAVDAASAYCPQY 107
F VDA YCP+Y
Sbjct 92 YFVVDATKVYCPEY 105
>gi|254776404|ref|ZP_05217920.1| hypothetical protein MaviaA2_17294 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=108
Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/89 (40%), Positives = 50/89 (57%), Gaps = 1/89 (1%)
Query 21 GLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAKAVIKA 80
G+AA A A + +D +FLA L GIT + A AI+ C+ +D+G VIK
Sbjct 13 GMAAPAHADPAGTTGSDASFLAALNQAGITYQNPATAIEVGKRACELMDQGSPQVEVIKN 72
Query 81 VAKAT-GLSAKGAKTFAVDAASAYCPQYV 108
V+ + G + GA F + AASAYCPQ++
Sbjct 73 VSSSNPGFTVDGAAQFTMIAASAYCPQHL 101
>gi|118619212|ref|YP_907544.1| hypothetical protein MUL_4013 [Mycobacterium ulcerans Agy99]
gi|183984121|ref|YP_001852412.1| hypothetical protein MMAR_4150 [Mycobacterium marinum M]
gi|118571322|gb|ABL06073.1| conserved hypothetical secreted rotein [Mycobacterium ulcerans
Agy99]
gi|183177447|gb|ACC42557.1| conserved hypothetical secreted rotein [Mycobacterium marinum
M]
Length=110
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/107 (39%), Positives = 62/107 (58%), Gaps = 2/107 (1%)
Query 1 MFTRRFAASMVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKD 60
MF+ R A+ V T + AA +GLA AG+A+AS+ D AF++Q+++ G+T S A ++
Sbjct 1 MFSTRITAA-VTTAIGAAAVGLAIAT-AGSAAASTDDTAFISQMESVGVTFSSPQAADRE 58
Query 61 AHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQY 107
H VC L G + + + + T L++K A F V A YCPQY
Sbjct 59 GHQVCQELASGKTGTDIAEEILSQTDLTSKQAAYFVVYATKDYCPQY 105
>gi|254821156|ref|ZP_05226157.1| hypothetical protein MintA_14562 [Mycobacterium intracellulare
ATCC 13950]
Length=107
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/90 (38%), Positives = 48/90 (54%), Gaps = 1/90 (1%)
Query 20 LGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAKAVIK 79
+G+A A A S+ D +FL L GIT S A A+ C+ +D+GH VI
Sbjct 9 IGVATPAHADPAGNSAADVSFLTALNKAGITYESPATAVGVGKRACELMDQGHPQVDVIH 68
Query 80 AVAKAT-GLSAKGAKTFAVDAASAYCPQYV 108
V+ + G + GA F + AASAYCPQ++
Sbjct 69 NVSSSNPGFTVDGAAQFTMIAASAYCPQHL 98
>gi|240171347|ref|ZP_04750006.1| hypothetical protein MkanA1_18691 [Mycobacterium kansasii ATCC
12478]
Length=118
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/101 (37%), Positives = 48/101 (48%), Gaps = 1/101 (0%)
Query 11 VGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDE 70
VG + LGLA + TA A D+AFL ++A GI S AI H VCD LD
Sbjct 18 VGLVVITGLLGLAVVAIP-TAKADGIDDAFLNAVKAKGINFASPQAAILVGHQVCDELDL 76
Query 71 GHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS 111
G + +AK L A F + +AYCP++ SS
Sbjct 77 GRHKADIANDLAKGGNLDGYRAGYFVGLSVAAYCPRHHHSS 117
>gi|296169915|ref|ZP_06851526.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895427|gb|EFG75130.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=135
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/91 (41%), Positives = 47/91 (52%), Gaps = 1/91 (1%)
Query 18 ATLGLAALGF-AGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAKA 76
A L LAA+ F + TASA D+AF+A L GI + AI H VC D +A
Sbjct 27 AVLLLAAVSFWSATASADPADDAFIASLANYGIEVRDSGIAIAMGHRVCKGFDNNANASV 86
Query 77 VIKAVAKATGLSAKGAKTFAVDAASAYCPQY 107
+ V + T LS K A F + +AYCPQY
Sbjct 87 LAMKVKRDTDLSMKEASYFVGLSVAAYCPQY 117
>gi|254820682|ref|ZP_05225683.1| hypothetical protein MintA_12176 [Mycobacterium intracellulare
ATCC 13950]
Length=119
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/86 (37%), Positives = 45/86 (53%), Gaps = 0/86 (0%)
Query 22 LAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAKAVIKAV 81
L+A+ +A A+S D+AFLA L+A GI S + H VC LD G + + V V
Sbjct 27 LSAMTAPASAHATSADDAFLAALKAKGINFESPEAVVNSGHTVCHELDSGQTPEQVANNV 86
Query 82 AKATGLSAKGAKTFAVDAASAYCPQY 107
++ L + A F + AYCP+Y
Sbjct 87 LSSSSLDSYHAGYFVGVSIKAYCPKY 112
>gi|254818543|ref|ZP_05223544.1| hypothetical protein MintA_01396 [Mycobacterium intracellulare
ATCC 13950]
Length=111
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/97 (40%), Positives = 52/97 (54%), Gaps = 2/97 (2%)
Query 17 AATLGLAALGFAGTASA-SSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAK 75
A T+GLA A TDEAF+A L+A GIT + +A+ VCD + +G
Sbjct 11 AVTIGLAVPAHADPVDGVDGTDEAFIASLRAAGITFADSDKAVGAGKWVCDTVGQGTQMP 70
Query 76 AVIKA-VAKATGLSAKGAKTFAVDAASAYCPQYVTSS 111
V+K ++K + LS A FA AAS YCP +TS+
Sbjct 71 DVVKTLLSKNSALSEGKANQFAAIAASTYCPGAITST 107
>gi|336459289|gb|EGO38233.1| Protein of unknown function (DUF732) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=110
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/82 (40%), Positives = 46/82 (57%), Gaps = 1/82 (1%)
Query 28 AGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAKAVIKAVAKAT-G 86
A A + +D +FLA L GIT + A AI+ C+ +D+G VIK V+ + G
Sbjct 22 ADPAGTTGSDASFLAALNQAGITYQNPATAIEVGKRACELMDQGSPQVEVIKNVSSSNPG 81
Query 87 LSAKGAKTFAVDAASAYCPQYV 108
+ GA F + AASAYCPQ++
Sbjct 82 FTVDGAAQFTMIAASAYCPQHL 103
>gi|342239958|gb|AEL19963.1| gp41 [Mycobacterium phage Charlie]
Length=120
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/107 (35%), Positives = 50/107 (47%), Gaps = 1/107 (0%)
Query 2 FTRRFAASMVGTTLTAATLGLAALGFAGTASASST-DEAFLAQLQADGITPPSAARAIKD 60
F RR + A L A++GFA A A S D+A+L L GIT PS A AI
Sbjct 6 FHRRTVRRFLAAVAAGAVLAGASIGFAANADADSVIDDAYLMTLDERGITYPSPAYAINT 65
Query 61 AHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQY 107
H VC LD G V +A+ + + A + +AYCP++
Sbjct 66 GHQVCALLDAGAHWTQVATLIARNSTIDVNDAAYLVGASMAAYCPEH 112
>gi|41409256|ref|NP_962092.1| hypothetical protein MAP3158c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118465687|ref|YP_883144.1| hypothetical protein MAV_3988 [Mycobacterium avium 104]
gi|41398076|gb|AAS05706.1| hypothetical protein MAP_3158c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118166974|gb|ABK67871.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=131
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/82 (40%), Positives = 46/82 (57%), Gaps = 1/82 (1%)
Query 28 AGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAKAVIKAVAKAT-G 86
A A + +D +FLA L GIT + A AI+ C+ +D+G VIK V+ + G
Sbjct 43 ADPAGTTGSDASFLAALNQAGITYQNPATAIEVGKRACELMDQGSPQVEVIKNVSSSNPG 102
Query 87 LSAKGAKTFAVDAASAYCPQYV 108
+ GA F + AASAYCPQ++
Sbjct 103 FTVDGAAQFTMIAASAYCPQHL 124
>gi|336459617|gb|EGO38552.1| Protein of unknown function (DUF732) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=117
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/77 (39%), Positives = 41/77 (54%), Gaps = 0/77 (0%)
Query 31 ASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAKAVIKAVAKATGLSAK 90
A A+S D+AFLA L+A GI S A+ H VC LD G + + V V ++ L +
Sbjct 34 AHATSADDAFLAALKAKGINYESPDAAVNSGHTVCHELDMGQTPEQVANNVLSSSTLDSY 93
Query 91 GAKTFAVDAASAYCPQY 107
A F + AYCP+Y
Sbjct 94 HAGYFVGVSIKAYCPKY 110
>gi|342861513|ref|ZP_08718160.1| hypothetical protein MCOL_21611 [Mycobacterium colombiense CECT
3035]
gi|342131002|gb|EGT84291.1| hypothetical protein MCOL_21611 [Mycobacterium colombiense CECT
3035]
Length=120
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/74 (38%), Positives = 41/74 (56%), Gaps = 0/74 (0%)
Query 34 SSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAKAVIKAVAKATGLSAKGAK 93
++ D+AFLA L+A GI SA A+ H VC LD G + + V +V ++ L + A
Sbjct 38 TNPDDAFLAALKAKGINYESADAAVNSGHTVCHELDMGQTPEQVANSVLSSSTLDSYHAG 97
Query 94 TFAVDAASAYCPQY 107
F + AYCP+Y
Sbjct 98 YFVGVSIKAYCPKY 111
>gi|118466072|ref|YP_883411.1| hypothetical protein MAV_4271 [Mycobacterium avium 104]
gi|254776706|ref|ZP_05218222.1| hypothetical protein MaviaA2_18846 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118167359|gb|ABK68256.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=117
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/77 (39%), Positives = 41/77 (54%), Gaps = 0/77 (0%)
Query 31 ASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAKAVIKAVAKATGLSAK 90
A A+S D+AFLA L+A GI S A+ H VC LD G + + V V ++ L +
Sbjct 34 AYATSADDAFLAALKAKGINYESPDAAVNSGHTVCHELDMGQTPEQVANNVLSSSTLDSY 93
Query 91 GAKTFAVDAASAYCPQY 107
A F + AYCP+Y
Sbjct 94 HAGYFVGVSIKAYCPKY 110
>gi|41409516|ref|NP_962352.1| hypothetical protein MAP3418 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398347|gb|AAS05968.1| hypothetical protein MAP_3418 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=149
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/77 (39%), Positives = 41/77 (54%), Gaps = 0/77 (0%)
Query 31 ASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAKAVIKAVAKATGLSAK 90
A A+S D+AFLA L+A GI S A+ H VC LD G + + V V ++ L +
Sbjct 66 AHATSADDAFLAALKAKGINYESPDAAVNSGHTVCHELDMGQTPEQVANNVLSSSTLDSY 125
Query 91 GAKTFAVDAASAYCPQY 107
A F + AYCP+Y
Sbjct 126 HAGYFVGVSIKAYCPKY 142
>gi|41407621|ref|NP_960457.1| hypothetical protein MAP1523 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395974|gb|AAS03840.1| hypothetical protein MAP_1523 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336457573|gb|EGO36578.1| Protein of unknown function (DUF732) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=106
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/92 (37%), Positives = 48/92 (53%), Gaps = 3/92 (3%)
Query 20 LGLAALGFAGTASASST--DEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAKAV 77
+G AALG+ A A D AFLA L GIT S + I A AVC + G + V
Sbjct 10 IGAAALGYTAPARAEPQGDDAAFLASLDQSGITYSSPVQVIASAKAVCGLMGRGETGLQV 69
Query 78 IKAVA-KATGLSAKGAKTFAVDAASAYCPQYV 108
+ + + G++ GA FA A++AYCP ++
Sbjct 70 VTDIKDQNPGMTMDGAAQFAALASNAYCPHHL 101
>gi|183982693|ref|YP_001850984.1| hypothetical protein MMAR_2686 [Mycobacterium marinum M]
gi|183176019|gb|ACC41129.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=106
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/99 (37%), Positives = 51/99 (52%), Gaps = 7/99 (7%)
Query 18 ATLGLAALGFAGTASASSTDEA------FLAQLQADGITPPSAARAIKDAHAVCDALDEG 71
A LGL+A+ + + + DE FLA LQ GIT + +AI A AVC LD G
Sbjct 6 ALLGLSAMIWLAAPAHAHPDEGGGDDVGFLAALQNAGITYSNPDQAIGSAKAVCWCLDGG 65
Query 72 HSAKAVIKAV-AKATGLSAKGAKTFAVDAASAYCPQYVT 109
S ++ V G + + A FAV AA+ YCP +++
Sbjct 66 ESGLELVHDVKTHNPGFNMEAASQFAVLAATYYCPHHLS 104
>gi|240173138|ref|ZP_04751796.1| hypothetical protein MkanA1_27746 [Mycobacterium kansasii ATCC
12478]
Length=111
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/68 (34%), Positives = 37/68 (55%), Gaps = 0/68 (0%)
Query 40 FLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDA 99
F++Q+++ G+T S A+++ H VC L G + + + T L++K A F V A
Sbjct 39 FISQMESVGVTFSSPQAAVQEGHQVCTELAAGATGSQIASEILSQTNLTSKQAAYFVVYA 98
Query 100 ASAYCPQY 107
YCPQY
Sbjct 99 TKDYCPQY 106
>gi|118618631|ref|YP_906963.1| hypothetical protein MUL_3300 [Mycobacterium ulcerans Agy99]
gi|183982063|ref|YP_001850354.1| hypothetical protein MMAR_2049 [Mycobacterium marinum M]
gi|118570741|gb|ABL05492.1| conserved secreted protein [Mycobacterium ulcerans Agy99]
gi|183175389|gb|ACC40499.1| conserved secreted protein [Mycobacterium marinum M]
Length=107
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/97 (43%), Positives = 52/97 (54%), Gaps = 6/97 (6%)
Query 10 MVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALD 69
+VG T A +GLAA A A + D+AFL L GIT P AARAI A +C ++
Sbjct 4 LVGVTGLAVMVGLAA-----PAHADANDDAFLVALGKAGITYPDAARAIAAAKWICQQVN 58
Query 70 EGHSAKAVIKAVAKA-TGLSAKGAKTFAVDAASAYCP 105
G V+K V + +GL GA F AA+AYCP
Sbjct 59 NGTQTVDVVKQVQSSNSGLQEDGAAKFTAIAANAYCP 95
>gi|41408883|ref|NP_961719.1| hypothetical protein MAP2785c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41397242|gb|AAS05102.1| hypothetical protein MAP_2785c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=161
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/103 (35%), Positives = 48/103 (47%), Gaps = 5/103 (4%)
Query 10 MVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALD 69
+G AAT+GLAA A D+ FL L+ GIT A AI +VC+ LD
Sbjct 51 FLGLCALAATIGLAAPAHADI----DNDQDFLKDLRDAGITYQDAGNAITIGKSVCELLD 106
Query 70 EGHS-AKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS 111
+G S AK V + A F +A+ YCP+Y+T
Sbjct 107 DGQSDAKIVTDLRNQNPAFQGASAAKFTYLSAAHYCPKYITGE 149
>gi|254775999|ref|ZP_05217515.1| hypothetical protein MaviaA2_15205 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=114
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/103 (35%), Positives = 48/103 (47%), Gaps = 5/103 (4%)
Query 10 MVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALD 69
+G AAT+GLAA A D+ FL L+ GIT A AI +VC+ LD
Sbjct 4 FLGLCALAATIGLAAPAHADI----DNDQDFLKDLRDAGITYQDAGNAITIGKSVCELLD 59
Query 70 EGHS-AKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS 111
+G S AK V + A F +A+ YCP+Y+T
Sbjct 60 DGQSDAKIVTDLRNQNPAFQGASAAKFTYLSAAHYCPKYITGE 102
>gi|118465355|ref|YP_882735.1| hypothetical protein MAV_3557 [Mycobacterium avium 104]
gi|118166642|gb|ABK67539.1| conserved hypothetical protein [Mycobacterium avium 104]
gi|336458836|gb|EGO37793.1| Protein of unknown function (DUF732) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=114
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/103 (35%), Positives = 48/103 (47%), Gaps = 5/103 (4%)
Query 10 MVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALD 69
+G AAT+GLAA A D+ FL L+ GIT A AI +VC+ LD
Sbjct 4 FLGLCALAATIGLAAPAHADI----DNDQDFLKDLRDAGITYQDAGNAITIGKSVCELLD 59
Query 70 EGHS-AKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS 111
+G S AK V + A F +A+ YCP+Y+T
Sbjct 60 DGQSDAKIVTDLRNQNPAFQGASAAKFTYLSAAHYCPKYITGE 102
>gi|296169238|ref|ZP_06850891.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896136|gb|EFG75803.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=129
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query 35 STDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAKAVIKAVAKAT-GLSAKGAK 93
+ D FLA L G+ +AA AI+ C +D+GHS VI++V+ G + A
Sbjct 27 NPDADFLAALDRSGVPYKNAAVAIRVGKKACQLMDQGHSEADVIQSVSSENAGFTVSDAT 86
Query 94 TFAVDAASAYCPQYV 108
F A S YCPQ++
Sbjct 87 KFTTSAVSVYCPQHI 101
>gi|41407615|ref|NP_960451.1| hypothetical protein MAP1517 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395968|gb|AAS03834.1| hypothetical protein MAP_1517 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=118
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/88 (39%), Positives = 43/88 (49%), Gaps = 1/88 (1%)
Query 25 LGFAGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAKAVIKAVAKA 84
+G A A A S D+AFLA L GIT P RAI+ VCD G + +I+ V +
Sbjct 21 VGMAIPAHADSDDDAFLAALNKAGITYPDPTRAIRAGQKVCDLAGSGTTELDIIRDVHEL 80
Query 85 T-GLSAKGAKTFAVDAASAYCPQYVTSS 111
S A F AA AYCP ++ S
Sbjct 81 NPAFSTAKAALFVQAAAGAYCPDRLSIS 108
>gi|336457566|gb|EGO36571.1| Protein of unknown function (DUF732) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=111
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/88 (39%), Positives = 43/88 (49%), Gaps = 1/88 (1%)
Query 25 LGFAGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAKAVIKAVAKA 84
+G A A A S D+AFLA L GIT P RAI+ VCD G + +I+ V +
Sbjct 14 VGMAIPAHADSDDDAFLAALNKAGITYPDPTRAIRAGQKVCDLAGSGTTELDIIRDVHEL 73
Query 85 T-GLSAKGAKTFAVDAASAYCPQYVTSS 111
S A F AA AYCP ++ S
Sbjct 74 NPAFSTAKAALFVQAAAGAYCPDRLSIS 101
>gi|118467287|ref|YP_882098.1| hypothetical protein MAV_2912 [Mycobacterium avium 104]
gi|254775387|ref|ZP_05216903.1| hypothetical protein MaviaA2_12061 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118168574|gb|ABK69471.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=111
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/88 (39%), Positives = 43/88 (49%), Gaps = 1/88 (1%)
Query 25 LGFAGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAKAVIKAVAKA 84
+G A A A S D+AFLA L GIT P RAI+ VCD G + +I+ V +
Sbjct 14 VGMAIPAHADSDDDAFLAALNKAGITYPDPTRAIRAGQKVCDLAGSGTTELDIIRDVHEL 73
Query 85 T-GLSAKGAKTFAVDAASAYCPQYVTSS 111
S A F AA AYCP ++ S
Sbjct 74 NPAFSTAKAALFVQAAAGAYCPDRLSIS 101
>gi|342858464|ref|ZP_08715119.1| hypothetical protein MCOL_06301 [Mycobacterium colombiense CECT
3035]
gi|342134168|gb|EGT87348.1| hypothetical protein MCOL_06301 [Mycobacterium colombiense CECT
3035]
Length=114
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/103 (34%), Positives = 47/103 (46%), Gaps = 5/103 (4%)
Query 10 MVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALD 69
++G T A + LAA A D+ FL L+ G+T AI +VCD LD
Sbjct 4 LLGLTSLATVIFLAAPAHADI----DNDQDFLKDLRDAGLTYQDGGNAITIGKSVCDLLD 59
Query 70 EGHS-AKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS 111
+G S AK V + G A F AA+ YCP+Y+T
Sbjct 60 DGQSDAKIVTDLRNQNPGFQGAAAAKFTYLAAAHYCPKYITGD 102
Lambda K H
0.315 0.122 0.335
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128534824512
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40