BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1293
Length=447
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608433|ref|NP_215809.1| diaminopimelate decarboxylase LysA ... 897 0.0
gi|289446888|ref|ZP_06436632.1| diaminopimelate decarboxylase ly... 897 0.0
gi|308231803|ref|ZP_07413799.2| diaminopimelate decarboxylase ly... 896 0.0
gi|334878513|pdb|1HKV|A Chain A, Mycobacterium Diaminopimelate D... 896 0.0
gi|308375427|ref|ZP_07443849.2| diaminopimelate decarboxylase ly... 896 0.0
gi|134105016|pdb|2O0T|A Chain A, The Three Dimensional Structure... 894 0.0
gi|339297915|gb|AEJ50025.1| diaminopimelate decarboxylase lysA [... 893 0.0
gi|29726282|pdb|1HKW|A Chain A, Mycobacterium Diaminopimelate Di... 883 0.0
gi|308373102|ref|ZP_07431007.2| diaminopimelate decarboxylase ly... 849 0.0
gi|66474038|gb|AAY46598.1| BCG hsp60-lysA chimera [Shuttle vecto... 813 0.0
gi|149964|gb|AAA25361.1| diaminopimelate decarboxylase [Mycobact... 811 0.0
gi|183984075|ref|YP_001852366.1| diaminopimelate decarboxylase L... 799 0.0
gi|118619175|ref|YP_907507.1| diaminopimelate decarboxylase LysA... 796 0.0
gi|240169521|ref|ZP_04748180.1| diaminopimelate decarboxylase Ly... 794 0.0
gi|15827559|ref|NP_301822.1| diaminopimelate decarboxylase [Myco... 786 0.0
gi|7436508|pir||T09993 diaminopimelate decarboxylase (EC 4.1.1.2... 785 0.0
gi|41408567|ref|NP_961403.1| LysA_2 [Mycobacterium avium subsp. ... 765 0.0
gi|336460916|gb|EGO39799.1| diaminopimelate decarboxylase [Mycob... 765 0.0
gi|118464128|ref|YP_880747.1| diaminopimelate decarboxylase [Myc... 764 0.0
gi|342858046|ref|ZP_08714702.1| diaminopimelate decarboxylase [M... 759 0.0
gi|254774332|ref|ZP_05215848.1| diaminopimelate decarboxylase [M... 759 0.0
gi|296170234|ref|ZP_06851827.1| diaminopimelate decarboxylase [M... 758 0.0
gi|254821292|ref|ZP_05226293.1| LysA_2 [Mycobacterium intracellu... 746 0.0
gi|118467936|ref|YP_889210.1| diaminopimelate decarboxylase [Myc... 734 0.0
gi|333989932|ref|YP_004522546.1| diaminopimelate decarboxylase L... 724 0.0
gi|108800861|ref|YP_641058.1| diaminopimelate decarboxylase [Myc... 719 0.0
gi|126436459|ref|YP_001072150.1| diaminopimelate decarboxylase [... 719 0.0
gi|120405303|ref|YP_955132.1| diaminopimelate decarboxylase [Myc... 711 0.0
gi|145222885|ref|YP_001133563.1| diaminopimelate decarboxylase [... 696 0.0
gi|333920935|ref|YP_004494516.1| diaminopimelate decarboxylase [... 691 0.0
gi|111018490|ref|YP_701462.1| diaminopimelate decarboxylase [Rho... 690 0.0
gi|226360613|ref|YP_002778391.1| diaminopimelate decarboxylase [... 690 0.0
gi|315443350|ref|YP_004076229.1| diaminopimelate decarboxylase [... 689 0.0
gi|229490040|ref|ZP_04383893.1| diaminopimelate decarboxylase [R... 688 0.0
gi|226307410|ref|YP_002767370.1| diaminopimelate decarboxylase [... 688 0.0
gi|169628525|ref|YP_001702174.1| diaminopimelate decarboxylase [... 686 0.0
gi|312139160|ref|YP_004006496.1| diaminopimelate decarboxylase l... 681 0.0
gi|325673535|ref|ZP_08153226.1| diaminopimelate decarboxylase [R... 681 0.0
gi|343928051|ref|ZP_08767516.1| diaminopimelate decarboxylase [G... 660 0.0
gi|319948887|ref|ZP_08022999.1| diaminopimelate decarboxylase [D... 657 0.0
gi|262201840|ref|YP_003273048.1| diaminopimelate decarboxylase [... 644 0.0
gi|54023015|ref|YP_117257.1| putative diaminopimelate decarboxyl... 632 3e-179
gi|326382075|ref|ZP_08203768.1| diaminopimelate decarboxylase [G... 620 1e-175
gi|296138956|ref|YP_003646199.1| diaminopimelate decarboxylase [... 611 9e-173
gi|134102735|ref|YP_001108396.1| diaminopimelate decarboxylase [... 601 9e-170
gi|257056970|ref|YP_003134802.1| diaminopimelate decarboxylase [... 582 6e-164
gi|302529808|ref|ZP_07282150.1| diaminopimelate decarboxylase [S... 567 2e-159
gi|300789615|ref|YP_003769906.1| diaminopimelate decarboxylase [... 558 9e-157
gi|256380150|ref|YP_003103810.1| diaminopimelate decarboxylase [... 546 2e-153
gi|331695513|ref|YP_004331752.1| diaminopimelate decarboxylase [... 536 2e-150
>gi|15608433|ref|NP_215809.1| diaminopimelate decarboxylase LysA [Mycobacterium tuberculosis
H37Rv]
gi|15840743|ref|NP_335780.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis CDC1551]
gi|31792486|ref|NP_854979.1| diaminopimelate decarboxylase LysA [Mycobacterium bovis AF2122/97]
59 more sequence titles
Length=447
Score = 897 bits (2318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/447 (99%), Positives = 447/447 (100%), Gaps = 0/447 (0%)
Query 1 VNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA 60
+NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA
Sbjct 1 MNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA 60
Query 61 FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV 120
FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV
Sbjct 61 FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV 120
Query 121 SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED 180
SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED
Sbjct 121 SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED 180
Query 181 QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG 240
QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG
Sbjct 181 QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG 240
Query 241 EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE 300
EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE
Sbjct 241 EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE 300
Query 301 PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV 360
PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV
Sbjct 301 PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV 360
Query 361 SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA 420
SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA
Sbjct 361 SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA 420
Query 421 VVAVHAGNARLVLRRETVDDLLSLEVR 447
VVAVHAGNARLVLRRETVDDLLSLEVR
Sbjct 421 VVAVHAGNARLVLRRETVDDLLSLEVR 447
>gi|289446888|ref|ZP_06436632.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
CPHL_A]
gi|289419846|gb|EFD17047.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
CPHL_A]
Length=447
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/447 (99%), Positives = 447/447 (100%), Gaps = 0/447 (0%)
Query 1 VNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA 60
+NELLHLAPNVWPRNTTRDE+GVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA
Sbjct 1 MNELLHLAPNVWPRNTTRDEIGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA 60
Query 61 FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV 120
FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV
Sbjct 61 FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV 120
Query 121 SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED 180
SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED
Sbjct 121 SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED 180
Query 181 QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG 240
QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG
Sbjct 181 QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG 240
Query 241 EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE 300
EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE
Sbjct 241 EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE 300
Query 301 PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV 360
PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV
Sbjct 301 PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV 360
Query 361 SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA 420
SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA
Sbjct 361 SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA 420
Query 421 VVAVHAGNARLVLRRETVDDLLSLEVR 447
VVAVHAGNARLVLRRETVDDLLSLEVR
Sbjct 421 VVAVHAGNARLVLRRETVDDLLSLEVR 447
>gi|308231803|ref|ZP_07413799.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
SUMu001]
gi|308370005|ref|ZP_07419962.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
SUMu002]
gi|308370683|ref|ZP_07422337.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
SUMu003]
13 more sequence titles
Length=491
Score = 896 bits (2316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/447 (100%), Positives = 447/447 (100%), Gaps = 0/447 (0%)
Query 1 VNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA 60
VNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA
Sbjct 45 VNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA 104
Query 61 FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV 120
FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV
Sbjct 105 FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV 164
Query 121 SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED 180
SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED
Sbjct 165 SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED 224
Query 181 QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG 240
QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG
Sbjct 225 QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG 284
Query 241 EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE 300
EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE
Sbjct 285 EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE 344
Query 301 PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV 360
PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV
Sbjct 345 PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV 404
Query 361 SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA 420
SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA
Sbjct 405 SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA 464
Query 421 VVAVHAGNARLVLRRETVDDLLSLEVR 447
VVAVHAGNARLVLRRETVDDLLSLEVR
Sbjct 465 VVAVHAGNARLVLRRETVDDLLSLEVR 491
>gi|334878513|pdb|1HKV|A Chain A, Mycobacterium Diaminopimelate Dicarboxylase (Lysa)
gi|334878514|pdb|1HKV|B Chain B, Mycobacterium Diaminopimelate Dicarboxylase (Lysa)
Length=453
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/447 (99%), Positives = 447/447 (100%), Gaps = 0/447 (0%)
Query 1 VNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA 60
+NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA
Sbjct 1 MNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA 60
Query 61 FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV 120
FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV
Sbjct 61 FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV 120
Query 121 SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED 180
SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED
Sbjct 121 SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED 180
Query 181 QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG 240
QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG
Sbjct 181 QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG 240
Query 241 EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE 300
EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE
Sbjct 241 EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE 300
Query 301 PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV 360
PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV
Sbjct 301 PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV 360
Query 361 SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA 420
SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA
Sbjct 361 SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA 420
Query 421 VVAVHAGNARLVLRRETVDDLLSLEVR 447
VVAVHAGNARLVLRRETVDDLLSLEVR
Sbjct 421 VVAVHAGNARLVLRRETVDDLLSLEVR 447
>gi|308375427|ref|ZP_07443849.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
SUMu007]
gi|308346422|gb|EFP35273.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
SUMu007]
Length=470
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/447 (100%), Positives = 447/447 (100%), Gaps = 0/447 (0%)
Query 1 VNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA 60
VNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA
Sbjct 24 VNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA 83
Query 61 FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV 120
FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV
Sbjct 84 FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV 143
Query 121 SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED 180
SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED
Sbjct 144 SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED 203
Query 181 QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG 240
QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG
Sbjct 204 QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG 263
Query 241 EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE 300
EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE
Sbjct 264 EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE 323
Query 301 PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV 360
PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV
Sbjct 324 PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV 383
Query 361 SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA 420
SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA
Sbjct 384 SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA 443
Query 421 VVAVHAGNARLVLRRETVDDLLSLEVR 447
VVAVHAGNARLVLRRETVDDLLSLEVR
Sbjct 444 VVAVHAGNARLVLRRETVDDLLSLEVR 470
>gi|134105016|pdb|2O0T|A Chain A, The Three Dimensional Structure Of Diaminopimelate Decarboxylase
From Mycobacterium Tuberculosis Reveals A Tetrameric
Enzyme Organisation
gi|134105017|pdb|2O0T|B Chain B, The Three Dimensional Structure Of Diaminopimelate Decarboxylase
From Mycobacterium Tuberculosis Reveals A Tetrameric
Enzyme Organisation
gi|134105018|pdb|2O0T|C Chain C, The Three Dimensional Structure Of Diaminopimelate Decarboxylase
From Mycobacterium Tuberculosis Reveals A Tetrameric
Enzyme Organisation
gi|134105019|pdb|2O0T|D Chain D, The Three Dimensional Structure Of Diaminopimelate Decarboxylase
From Mycobacterium Tuberculosis Reveals A Tetrameric
Enzyme Organisation
Length=467
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/447 (99%), Positives = 446/447 (99%), Gaps = 0/447 (0%)
Query 1 VNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA 60
VNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA
Sbjct 3 VNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA 62
Query 61 FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV 120
FGSGANVHYAA AFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV
Sbjct 63 FGSGANVHYAAXAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV 122
Query 121 SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED 180
SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED
Sbjct 123 SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED 182
Query 181 QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG 240
QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG
Sbjct 183 QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG 242
Query 241 EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE 300
EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE
Sbjct 243 EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE 302
Query 301 PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV 360
PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV
Sbjct 303 PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV 362
Query 361 SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA 420
SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA
Sbjct 363 SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA 422
Query 421 VVAVHAGNARLVLRRETVDDLLSLEVR 447
VVAVHAGNARLVLRRETVDDLLSLEVR
Sbjct 423 VVAVHAGNARLVLRRETVDDLLSLEVR 449
>gi|339297915|gb|AEJ50025.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
CCDC5180]
Length=447
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/447 (99%), Positives = 446/447 (99%), Gaps = 0/447 (0%)
Query 1 VNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA 60
+NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA
Sbjct 1 MNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA 60
Query 61 FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV 120
FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV
Sbjct 61 FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV 120
Query 121 SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED 180
SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED
Sbjct 121 SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED 180
Query 181 QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG 240
QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG
Sbjct 181 QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG 240
Query 241 EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE 300
EFGPEKTAQIATVDLGGGLGISYL SDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE
Sbjct 241 EFGPEKTAQIATVDLGGGLGISYLRSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE 300
Query 301 PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV 360
PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV
Sbjct 301 PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV 360
Query 361 SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA 420
SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA
Sbjct 361 SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA 420
Query 421 VVAVHAGNARLVLRRETVDDLLSLEVR 447
VVAVHAGNARLVLRRETVDDLLSLEVR
Sbjct 421 VVAVHAGNARLVLRRETVDDLLSLEVR 447
>gi|29726282|pdb|1HKW|A Chain A, Mycobacterium Diaminopimelate Dicarboxylase (Lysa)
gi|29726283|pdb|1HKW|B Chain B, Mycobacterium Diaminopimelate Dicarboxylase (Lysa)
Length=453
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/446 (99%), Positives = 442/446 (99%), Gaps = 0/446 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF
Sbjct 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS
Sbjct 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
ELTAAVKAGVGHIVVDS TEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ
Sbjct 122 ELTAAVKAGVGHIVVDSXTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFGLSVASGAA AAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE
Sbjct 182 KFGLSVASGAAXAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP
Sbjct 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGG SDNIRTALYGAQYDVRLVSRVS
Sbjct 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGXSDNIRTALYGAQYDVRLVSRVS 361
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYN VGRPAV
Sbjct 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNXVGRPAV 421
Query 422 VAVHAGNARLVLRRETVDDLLSLEVR 447
VAVHAGNARLVLRRETVDDLLSLEVR
Sbjct 422 VAVHAGNARLVLRRETVDDLLSLEVR 447
>gi|308373102|ref|ZP_07431007.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
SUMu005]
gi|308338874|gb|EFP27725.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
SUMu005]
Length=425
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/425 (99%), Positives = 425/425 (100%), Gaps = 0/425 (0%)
Query 23 VVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFGSGANVHYAAKAFLCSEVARW 82
+VCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFGSGANVHYAAKAFLCSEVARW
Sbjct 1 MVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFGSGANVHYAAKAFLCSEVARW 60
Query 83 ISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEI 142
ISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEI
Sbjct 61 ISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEI 120
Query 143 ERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFAT 202
ERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFAT
Sbjct 121 ERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFAT 180
Query 203 DHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGIS 262
DHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGIS
Sbjct 181 DHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGIS 240
Query 263 YLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDV 322
YLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDV
Sbjct 241 YLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDV 300
Query 323 DVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIV 382
DVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIV
Sbjct 301 DVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIV 360
Query 383 RDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLL 442
RDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLL
Sbjct 361 RDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLL 420
Query 443 SLEVR 447
SLEVR
Sbjct 421 SLEVR 425
>gi|66474038|gb|AAY46598.1| BCG hsp60-lysA chimera [Shuttle vector pCB112-Edim6]
gi|66474042|gb|AAY46601.1| hsp60-lysA chimera [Shuttle vector pCB119-Edim6]
gi|77632628|gb|ABB00292.1| BCG hsp60-lysA chimaera [Shuttle vector pCB112-HPV11-L1]
Length=455
Score = 813 bits (2101), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/448 (93%), Positives = 421/448 (94%), Gaps = 3/448 (0%)
Query 1 VNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA 60
VNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA
Sbjct 10 VNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA 69
Query 61 FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV 120
FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV
Sbjct 70 FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV 129
Query 121 SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED 180
SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED
Sbjct 130 SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED 189
Query 181 QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG 240
QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG
Sbjct 190 QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG 249
Query 241 EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE 300
EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE
Sbjct 250 EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE 309
Query 301 PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV 360
PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRT LYGAQYDVRLVSRV
Sbjct 310 PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTGLYGAQYDVRLVSRV 369
Query 361 SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA 420
SDAPPVPARLVGKHCESGDIIVRDTWVP P + + +++ S + GRP+
Sbjct 370 SDAPPVPARLVGKHCESGDIIVRDTWVPTIFGPAIWLRLPPPALLLFAVESLQH--GRPS 427
Query 421 VVAVHA-GNARLVLRRETVDDLLSLEVR 447
A GNARLVLRRETVDDLLSLEVR
Sbjct 428 RCGSGARGNARLVLRRETVDDLLSLEVR 455
>gi|149964|gb|AAA25361.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis str.
Erdman]
Length=446
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/448 (93%), Positives = 421/448 (94%), Gaps = 3/448 (0%)
Query 1 VNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA 60
+NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA
Sbjct 1 MNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA 60
Query 61 FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV 120
FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV
Sbjct 61 FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV 120
Query 121 SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED 180
SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED
Sbjct 121 SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED 180
Query 181 QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG 240
QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG
Sbjct 181 QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG 240
Query 241 EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE 300
EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE
Sbjct 241 EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE 300
Query 301 PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV 360
PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRT LYGAQYDVRLVSRV
Sbjct 301 PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTGLYGAQYDVRLVSRV 360
Query 361 SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPA 420
SDAPPVPARLVGKHCESGDIIVRDTWVP P + + +++ S + GRP+
Sbjct 361 SDAPPVPARLVGKHCESGDIIVRDTWVPTIFGPAIWLRLPPPALLLFAVESLQH--GRPS 418
Query 421 VVAVHA-GNARLVLRRETVDDLLSLEVR 447
A GNARLVLRRETVDDLLSLEVR
Sbjct 419 RCGSGARGNARLVLRRETVDDLLSLEVR 446
>gi|183984075|ref|YP_001852366.1| diaminopimelate decarboxylase LysA [Mycobacterium marinum M]
gi|183177401|gb|ACC42511.1| diaminopimelate decarboxylase LysA [Mycobacterium marinum M]
Length=472
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/446 (89%), Positives = 419/446 (94%), Gaps = 0/446 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
ELL+LAPNVWPRNTTRDE G IAG+PLT+LA+EYGTPLFVIDEDDFRSRC+E AAAF
Sbjct 27 EELLYLAPNVWPRNTTRDEQGCARIAGVPLTELAREYGTPLFVIDEDDFRSRCQEIAAAF 86
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G G NV+YAAKAFLCSE+ARW++EEGL +DV TGGELAVALHA+FPPERITLHGNNKSV+
Sbjct 87 GGGHNVNYAAKAFLCSEIARWVNEEGLSIDVSTGGELAVALHANFPPERITLHGNNKSVA 146
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
ELT AVKAGVGHIV+DSM EIERLDAIAGEAGIVQDV VRLTVGVEAHTHEFISTAHEDQ
Sbjct 147 ELTTAVKAGVGHIVLDSMIEIERLDAIAGEAGIVQDVFVRLTVGVEAHTHEFISTAHEDQ 206
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFGLS++SGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLR+VV E
Sbjct 207 KFGLSISSGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLREVVAE 266
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
FG EKTAQ+ATVDLGGGLGISYL SDDPPP+ ELA KLG IVS+ES AVGLP P+LVVEP
Sbjct 267 FGSEKTAQLATVDLGGGLGISYLSSDDPPPVGELADKLGAIVSNESAAVGLPAPRLVVEP 326
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGTITLYEVGTVKDVDVSATA+RRYVSVDGGMSDNIRTALY AQYDVRLVSRVS
Sbjct 327 GRAIAGPGTITLYEVGTVKDVDVSATANRRYVSVDGGMSDNIRTALYDAQYDVRLVSRVS 386
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
DAP AR+VGKHCESGDIIVRDTWVPDD++PGDLVAVAATGAYCYSLSSRYNM+GRPAV
Sbjct 387 DAPATLARVVGKHCESGDIIVRDTWVPDDLQPGDLVAVAATGAYCYSLSSRYNMIGRPAV 446
Query 422 VAVHAGNARLVLRRETVDDLLSLEVR 447
VAV AG ARLVLRRETVDDLLSLEVR
Sbjct 447 VAVRAGKARLVLRRETVDDLLSLEVR 472
>gi|118619175|ref|YP_907507.1| diaminopimelate decarboxylase LysA [Mycobacterium ulcerans Agy99]
gi|118571285|gb|ABL06036.1| diaminopimelate decarboxylase LysA [Mycobacterium ulcerans Agy99]
Length=472
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/446 (88%), Positives = 418/446 (94%), Gaps = 0/446 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
ELL+LAPNVWPRNT RDE G IAG+PLT+LA+EYGTPLFVIDEDDFRSRC+E AAAF
Sbjct 27 EELLYLAPNVWPRNTARDEQGCARIAGVPLTELAREYGTPLFVIDEDDFRSRCQEIAAAF 86
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G G NV+YAAKAFLCSE+ARW++EEGL +DV TGGELAVALHA+FPPERITLHGNNKSV+
Sbjct 87 GGGHNVNYAAKAFLCSEIARWVNEEGLSIDVSTGGELAVALHANFPPERITLHGNNKSVA 146
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
ELT AVKAGVGHIV+DSM EIERLDAIAGEAGIVQDV VRLTVGVEAHTHEFISTAHEDQ
Sbjct 147 ELTTAVKAGVGHIVLDSMIEIERLDAIAGEAGIVQDVFVRLTVGVEAHTHEFISTAHEDQ 206
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFGLS++SGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLR+VV E
Sbjct 207 KFGLSISSGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLREVVAE 266
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
FG EKTAQ+A VDLGGGLGISYL SDDPPP+ ELA KLG IVS+ES AVGLP P+LVVEP
Sbjct 267 FGSEKTAQLAMVDLGGGLGISYLSSDDPPPVGELADKLGAIVSNESAAVGLPAPRLVVEP 326
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGTITLYEVGTVKDVDVSATA+RRYVSVDGGMSDNIRTALY AQYDVRLVSRVS
Sbjct 327 GRAIAGPGTITLYEVGTVKDVDVSATANRRYVSVDGGMSDNIRTALYDAQYDVRLVSRVS 386
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
DAP + AR+VGKHCESGDIIVRDTWVPDD++PGDLVAVAATGAYCYSLSSRYNM+GRPAV
Sbjct 387 DAPAMLARVVGKHCESGDIIVRDTWVPDDLQPGDLVAVAATGAYCYSLSSRYNMIGRPAV 446
Query 422 VAVHAGNARLVLRRETVDDLLSLEVR 447
VAV AG ARLVLRRETVDDLLSLEVR
Sbjct 447 VAVRAGKARLVLRRETVDDLLSLEVR 472
>gi|240169521|ref|ZP_04748180.1| diaminopimelate decarboxylase LysA [Mycobacterium kansasii ATCC
12478]
Length=468
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/446 (87%), Positives = 418/446 (94%), Gaps = 0/446 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
ELL L PNVWPRNT RD+ GV CIAG+PLT+LA EYGTPLFV+DEDDFRSRC+E AAAF
Sbjct 23 QELLRLDPNVWPRNTVRDQSGVACIAGVPLTELAHEYGTPLFVVDEDDFRSRCQEIAAAF 82
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G G NV+YAAKAFLCSE+ARW+ EEGL LDV TGGELAVALHA FPPERITLHGNNKSV+
Sbjct 83 GGGHNVYYAAKAFLCSEIARWVEEEGLSLDVATGGELAVALHADFPPERITLHGNNKSVA 142
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
ELTAAVKAGVGH+V+DSM EIERLDAIA +AG++QDVLVR+TVGVEAHTHEFISTAHEDQ
Sbjct 143 ELTAAVKAGVGHVVLDSMIEIERLDAIAAQAGVIQDVLVRVTVGVEAHTHEFISTAHEDQ 202
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFGLSVASGAAMAAVRRVFA DHLRLVGLHSHIGSQIFDV GFE+AAHRVIGLLR+VVGE
Sbjct 203 KFGLSVASGAAMAAVRRVFAADHLRLVGLHSHIGSQIFDVAGFEIAAHRVIGLLREVVGE 262
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
FG EKTAQ++TVDLGGGLGISY+P+DDPPPI+ELAAKL I+S+ES AVGLPTP+LVVEP
Sbjct 263 FGAEKTAQLSTVDLGGGLGISYVPADDPPPISELAAKLSAILSNESAAVGLPTPRLVVEP 322
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGTITLYEVGTVKDVDVSATA+RRYVSVDGGMSDNIRTALY A+YDVRLVSRVS
Sbjct 323 GRAIAGPGTITLYEVGTVKDVDVSATANRRYVSVDGGMSDNIRTALYDAEYDVRLVSRVS 382
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
DAP VPARLVGKHCESGDIIVRDTW+P+D+RPGDL+ VAATGAYCYSLSSRYN++GRPAV
Sbjct 383 DAPAVPARLVGKHCESGDIIVRDTWMPEDLRPGDLLGVAATGAYCYSLSSRYNLIGRPAV 442
Query 422 VAVHAGNARLVLRRETVDDLLSLEVR 447
VAV G ARLVLRRETVDDLLSLEVR
Sbjct 443 VAVRRGKARLVLRRETVDDLLSLEVR 468
>gi|15827559|ref|NP_301822.1| diaminopimelate decarboxylase [Mycobacterium leprae TN]
gi|221230036|ref|YP_002503452.1| diaminopimelate decarboxylase [Mycobacterium leprae Br4923]
gi|13626268|sp|Q50140.2|DCDA_MYCLE RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase;
Short=DAPDC
gi|13093109|emb|CAC31509.1| diaminopimelate decarboxylase [Mycobacterium leprae]
gi|219933143|emb|CAR71223.1| diaminopimelate decarboxylase [Mycobacterium leprae Br4923]
Length=472
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/446 (87%), Positives = 411/446 (93%), Gaps = 0/446 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
++LL LA NVWPRN TRDE GV CIAG LT LA EYGTPLFVIDEDDFR RCRE AAAF
Sbjct 27 DDLLRLASNVWPRNITRDETGVACIAGNKLTDLAGEYGTPLFVIDEDDFRFRCREIAAAF 86
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G G NVHYAAKAFLC+E+ARWI EEGL LDVC+GGELAVALHASFPPERI+LHGNNKSV+
Sbjct 87 GGGENVHYAAKAFLCTEIARWIDEEGLSLDVCSGGELAVALHASFPPERISLHGNNKSVA 146
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
EL AVKAGVG+IV+DS TEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFI+TAHEDQ
Sbjct 147 ELKDAVKAGVGYIVLDSTTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFIATAHEDQ 206
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFGLSVASGAAMAAVRRVFATD+LRLVGLHSHIGSQIFDV GFELAAHRVIGLL D+VGE
Sbjct 207 KFGLSVASGAAMAAVRRVFATDNLRLVGLHSHIGSQIFDVAGFELAAHRVIGLLCDIVGE 266
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
F PEKTAQ++ VDLGGGLGISYLP DDPPPI ELAAKLG IVS+ES AVGLP PKL+VEP
Sbjct 267 FDPEKTAQLSIVDLGGGLGISYLPDDDPPPIFELAAKLGAIVSNESAAVGLPVPKLMVEP 326
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGTITLYEVGT+KDVDVSATAHRRYVS+DGGMSDNIRTALY AQYDVRLVSR S
Sbjct 327 GRAIAGPGTITLYEVGTIKDVDVSATAHRRYVSIDGGMSDNIRTALYDAQYDVRLVSRTS 386
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
DAP PA +VGKHCESGDI+VRDTWVPDD++PGDLV VAATGAYCYSLSSRYNM+GRPAV
Sbjct 387 DAPAAPASIVGKHCESGDIVVRDTWVPDDLKPGDLVGVAATGAYCYSLSSRYNMLGRPAV 446
Query 422 VAVHAGNARLVLRRETVDDLLSLEVR 447
VAV AG ARL+LRRETVDDLLSLEVR
Sbjct 447 VAVCAGQARLILRRETVDDLLSLEVR 472
>gi|7436508|pir||T09993 diaminopimelate decarboxylase (EC 4.1.1.20) - Mycobacterium leprae
gi|699341|gb|AAA63102.1| lysA [Mycobacterium leprae]
Length=495
Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/446 (87%), Positives = 411/446 (93%), Gaps = 0/446 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
++LL LA NVWPRN TRDE GV CIAG LT LA EYGTPLFVIDEDDFR RCRE AAAF
Sbjct 50 DDLLRLASNVWPRNITRDETGVACIAGNKLTDLAGEYGTPLFVIDEDDFRFRCREIAAAF 109
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G G NVHYAAKAFLC+E+ARWI EEGL LDVC+GGELAVALHASFPPERI+LHGNNKSV+
Sbjct 110 GGGENVHYAAKAFLCTEIARWIDEEGLSLDVCSGGELAVALHASFPPERISLHGNNKSVA 169
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
EL AVKAGVG+IV+DS TEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFI+TAHEDQ
Sbjct 170 ELKDAVKAGVGYIVLDSTTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFIATAHEDQ 229
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFGLSVASGAAMAAVRRVFATD+LRLVGLHSHIGSQIFDV GFELAAHRVIGLL D+VGE
Sbjct 230 KFGLSVASGAAMAAVRRVFATDNLRLVGLHSHIGSQIFDVAGFELAAHRVIGLLCDIVGE 289
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
F PEKTAQ++ VDLGGGLGISYLP DDPPPI ELAAKLG IVS+ES AVGLP PKL+VEP
Sbjct 290 FDPEKTAQLSIVDLGGGLGISYLPDDDPPPIFELAAKLGAIVSNESAAVGLPVPKLMVEP 349
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGTITLYEVGT+KDVDVSATAHRRYVS+DGGMSDNIRTALY AQYDVRLVSR S
Sbjct 350 GRAIAGPGTITLYEVGTIKDVDVSATAHRRYVSIDGGMSDNIRTALYDAQYDVRLVSRTS 409
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
DAP PA +VGKHCESGDI+VRDTWVPDD++PGDLV VAATGAYCYSLSSRYNM+GRPAV
Sbjct 410 DAPAAPASIVGKHCESGDIVVRDTWVPDDLKPGDLVGVAATGAYCYSLSSRYNMLGRPAV 469
Query 422 VAVHAGNARLVLRRETVDDLLSLEVR 447
VAV AG ARL+LRRETVDDLLSLEVR
Sbjct 470 VAVCAGQARLILRRETVDDLLSLEVR 495
>gi|41408567|ref|NP_961403.1| LysA_2 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41396925|gb|AAS04786.1| LysA_2 [Mycobacterium avium subsp. paratuberculosis K-10]
Length=472
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/446 (86%), Positives = 403/446 (91%), Gaps = 0/446 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
ELL LAPNVWPRN TR+E GV IAG+ +T+LA+EYGTPLFV+DEDDFRSRCRE A+AF
Sbjct 27 EELLLLAPNVWPRNATRNEAGVATIAGVAVTELAREYGTPLFVVDEDDFRSRCREIASAF 86
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G G NVHYAAKAFLCSEVARWI EEGL LDVCTGGELAVALHA FPPERIT HGNNKSV+
Sbjct 87 GGGNNVHYAAKAFLCSEVARWIDEEGLSLDVCTGGELAVALHADFPPERITFHGNNKSVA 146
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
ELTAAVKAGVGH+V+DSMTEIERLDAIA +AGIVQDV VRLTVGVEAHTHEFISTAHEDQ
Sbjct 147 ELTAAVKAGVGHVVLDSMTEIERLDAIAADAGIVQDVFVRLTVGVEAHTHEFISTAHEDQ 206
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFGLSVASGAA+AAV RVF T+HLRLVGLHSHIGSQIFDV GFELAA RVIGLL D V +
Sbjct 207 KFGLSVASGAALAAVGRVFDTEHLRLVGLHSHIGSQIFDVAGFELAARRVIGLLHDAVEQ 266
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
FG EKTAQIATVDLGGGLGISYL +DDPPP+ ELA KL IV ES AVGLPTP+LVVEP
Sbjct 267 FGVEKTAQIATVDLGGGLGISYLAADDPPPMGELAGKLSAIVQHESAAVGLPTPRLVVEP 326
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALY AQYD RLVSRVS
Sbjct 327 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYDAQYDARLVSRVS 386
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
DAP AR+VGKHCESGDI+VRDTWVP D+RPGDL+ VAATGAYCYSLSSRYNMV RPAV
Sbjct 387 DAPAELARVVGKHCESGDIVVRDTWVPGDLRPGDLIGVAATGAYCYSLSSRYNMVCRPAV 446
Query 422 VAVHAGNARLVLRRETVDDLLSLEVR 447
VAV G ARLVLRRETVDDLLSLEVR
Sbjct 447 VAVRDGRARLVLRRETVDDLLSLEVR 472
>gi|336460916|gb|EGO39799.1| diaminopimelate decarboxylase [Mycobacterium avium subsp. paratuberculosis
S397]
Length=472
Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/446 (86%), Positives = 403/446 (91%), Gaps = 0/446 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
ELL LAPNVWPRN TR+E GV IAG+ +T+LA+EYGTPLFV+DEDDFRSRCRE A+AF
Sbjct 27 EELLLLAPNVWPRNATRNEAGVATIAGVAVTELAREYGTPLFVVDEDDFRSRCREIASAF 86
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G G NVHYAAKAFLCSEVARWI EEGL LDVCTGGELAVALHA FPPERIT HGNNKSV+
Sbjct 87 GGGNNVHYAAKAFLCSEVARWIDEEGLSLDVCTGGELAVALHADFPPERITFHGNNKSVA 146
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
ELTAAVKAGVGH+V+DSMTEIERLDAIA +AGIVQDV VRLTVGVEAHTHEFISTAHEDQ
Sbjct 147 ELTAAVKAGVGHVVLDSMTEIERLDAIAADAGIVQDVFVRLTVGVEAHTHEFISTAHEDQ 206
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFGLSVASGAA+AAV RVF T+HLRLVGLHSHIGSQIFDV GFELAA RVIGLL D V +
Sbjct 207 KFGLSVASGAALAAVGRVFDTEHLRLVGLHSHIGSQIFDVAGFELAARRVIGLLHDAVEQ 266
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
FG EKTAQ+ATVDLGGGLGISYL +DDPPP+ ELA KL IV ES AVGLPTP+LVVEP
Sbjct 267 FGVEKTAQMATVDLGGGLGISYLAADDPPPMGELAGKLSAIVQHESAAVGLPTPRLVVEP 326
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALY AQYD RLVSRVS
Sbjct 327 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYDAQYDARLVSRVS 386
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
DAP AR+VGKHCESGDI+VRDTWVP D+RPGDL+ VAATGAYCYSLSSRYNMV RPAV
Sbjct 387 DAPAELARVVGKHCESGDIVVRDTWVPGDLRPGDLIGVAATGAYCYSLSSRYNMVCRPAV 446
Query 422 VAVHAGNARLVLRRETVDDLLSLEVR 447
VAV G ARLVLRRETVDDLLSLEVR
Sbjct 447 VAVRDGRARLVLRRETVDDLLSLEVR 472
>gi|118464128|ref|YP_880747.1| diaminopimelate decarboxylase [Mycobacterium avium 104]
gi|118165415|gb|ABK66312.1| diaminopimelate decarboxylase [Mycobacterium avium 104]
Length=472
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/446 (86%), Positives = 403/446 (91%), Gaps = 0/446 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
ELL LAPNVWPRN TR+E GV IAG+ +T+LA+EYGTPLFV+DEDDFRSRCRE A+AF
Sbjct 27 EELLLLAPNVWPRNATRNEAGVATIAGVAVTELAREYGTPLFVVDEDDFRSRCREIASAF 86
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G G NVHYAAKAFLCSEVARWI EEGL LDVCTGGELAVALHA FPPERIT HGNNKSV+
Sbjct 87 GGGNNVHYAAKAFLCSEVARWIDEEGLSLDVCTGGELAVALHADFPPERITFHGNNKSVA 146
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
ELTAAVKAGVGH+V+DSMTEIERLDAIA +AGIVQDV VRLTVGVEAHTHEFISTAHEDQ
Sbjct 147 ELTAAVKAGVGHVVLDSMTEIERLDAIAADAGIVQDVFVRLTVGVEAHTHEFISTAHEDQ 206
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFGLSVASG+A+AAV RVF T+HLRLVGLHSHIGSQIFDV GFELAA RVIGLL D V +
Sbjct 207 KFGLSVASGSALAAVGRVFDTEHLRLVGLHSHIGSQIFDVAGFELAARRVIGLLHDAVEQ 266
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
FG EKTAQIATVDLGGGLGISYL +DDPPP+ ELA KL IV ES AVGLPTP+LVVEP
Sbjct 267 FGVEKTAQIATVDLGGGLGISYLAADDPPPMGELAGKLSAIVQHESAAVGLPTPRLVVEP 326
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALY AQYD RLVSRVS
Sbjct 327 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYDAQYDARLVSRVS 386
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
DAP AR+VGKHCESGDI+VRDTWVP D+RPGDL+ VAATGAYCYSLSSRYNMV RPAV
Sbjct 387 DAPAELARIVGKHCESGDIVVRDTWVPGDLRPGDLIGVAATGAYCYSLSSRYNMVCRPAV 446
Query 422 VAVHAGNARLVLRRETVDDLLSLEVR 447
VAV G ARLVLRRETVDDLLSLEVR
Sbjct 447 VAVRDGRARLVLRRETVDDLLSLEVR 472
>gi|342858046|ref|ZP_08714702.1| diaminopimelate decarboxylase [Mycobacterium colombiense CECT
3035]
gi|342135379|gb|EGT88545.1| diaminopimelate decarboxylase [Mycobacterium colombiense CECT
3035]
Length=472
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/446 (85%), Positives = 401/446 (90%), Gaps = 0/446 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
ELL LAPNVWPRN RDE GV IAG+ +T LAQEYGTPLFVIDEDDFRSRCRE A+AF
Sbjct 27 EELLLLAPNVWPRNVARDEAGVASIAGVAVTDLAQEYGTPLFVIDEDDFRSRCREIASAF 86
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G G NVHYAAKAFLCSE+ARWI EEGL LDVCTGGELAVALHA+FPPERIT HGNNKSV+
Sbjct 87 GGGKNVHYAAKAFLCSEIARWIDEEGLSLDVCTGGELAVALHANFPPERITFHGNNKSVA 146
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
ELTAAVKAGVGH+V+DS+ EIERLDAIAGEAGIVQDV VRLTVGVEAHTHEFISTAHEDQ
Sbjct 147 ELTAAVKAGVGHVVLDSLVEIERLDAIAGEAGIVQDVFVRLTVGVEAHTHEFISTAHEDQ 206
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFGLS+ASGAA+ AV +VF T HLRLVGLHSHIGSQIFDV GFE+AA RVIGLL V +
Sbjct 207 KFGLSLASGAALDAVGKVFETRHLRLVGLHSHIGSQIFDVAGFEIAARRVIGLLHQAVEQ 266
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
FG EKTAQI+TVDLGGGLGISYL +DDPPP+ ELAAKL IV +ES AVGLPTP+LVVEP
Sbjct 267 FGVEKTAQISTVDLGGGLGISYLAADDPPPMGELAAKLSEIVRNESAAVGLPTPRLVVEP 326
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALY AQYD RLVSR+S
Sbjct 327 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYDAQYDARLVSRLS 386
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
DAP AR+VGKHCESGDI+VRDTWVP D+RPGDL+ +AATGAYCYSLSSRYNM+ RPAV
Sbjct 387 DAPAELARVVGKHCESGDIVVRDTWVPGDLRPGDLIGIAATGAYCYSLSSRYNMICRPAV 446
Query 422 VAVHAGNARLVLRRETVDDLLSLEVR 447
VAV G ARLVLRRETVDDLLSLEVR
Sbjct 447 VAVRDGRARLVLRRETVDDLLSLEVR 472
>gi|254774332|ref|ZP_05215848.1| diaminopimelate decarboxylase [Mycobacterium avium subsp. avium
ATCC 25291]
Length=472
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/446 (85%), Positives = 401/446 (90%), Gaps = 0/446 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
ELL LAPNVWPRN TR+E GV IAG+ +T+LA+EYGTPLFV+DEDDFRSRCRE A+AF
Sbjct 27 EELLVLAPNVWPRNATRNEAGVATIAGVAVTELAREYGTPLFVVDEDDFRSRCREIASAF 86
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G G NVHYAAK FLCSEVARWI EEGL LDVCTGGELAVALHA FPPERIT HGNNKSV+
Sbjct 87 GGGNNVHYAAKVFLCSEVARWIDEEGLSLDVCTGGELAVALHADFPPERITFHGNNKSVA 146
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
ELTAAVKAGVGH+V+DSMTEIERLDAIA +AGIVQDV VRLTVGVEAHTHEFISTAHEDQ
Sbjct 147 ELTAAVKAGVGHVVLDSMTEIERLDAIAADAGIVQDVFVRLTVGVEAHTHEFISTAHEDQ 206
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFGLSVASGAA+AAV RVF T+HLRLVGLHSHIGSQIFDV GFELAA RVIGLL D V +
Sbjct 207 KFGLSVASGAALAAVGRVFDTEHLRLVGLHSHIGSQIFDVAGFELAARRVIGLLHDAVEQ 266
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
FG EKTAQIATVDLGGGLGISYL +D+PPP+ ELA KL IV ES AV LPTP+LVVEP
Sbjct 267 FGVEKTAQIATVDLGGGLGISYLAADEPPPMGELAGKLSAIVQHESAAVRLPTPRLVVEP 326
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALY AQYD RLVSRVS
Sbjct 327 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYDAQYDARLVSRVS 386
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
DAP AR+VGKHCESGDI+VRDTWVP D+RPGDL+ VAATGAYCYSLSSRYNMV RPAV
Sbjct 387 DAPAELARIVGKHCESGDIVVRDTWVPGDLRPGDLIGVAATGAYCYSLSSRYNMVCRPAV 446
Query 422 VAVHAGNARLVLRRETVDDLLSLEVR 447
VAV G ARLVLRRETVDDLLSLEVR
Sbjct 447 VAVRDGRARLVLRRETVDDLLSLEVR 472
>gi|296170234|ref|ZP_06851827.1| diaminopimelate decarboxylase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895110|gb|EFG74828.1| diaminopimelate decarboxylase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=472
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/446 (84%), Positives = 402/446 (91%), Gaps = 0/446 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
+ELL LAPNVWPRN RD+ GV IAGIPLTQLAQEYGTPLFV+DEDDFRSRCRE A AF
Sbjct 27 DELLRLAPNVWPRNIARDDTGVARIAGIPLTQLAQEYGTPLFVVDEDDFRSRCRELATAF 86
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G G NV YAAKAFLCSE+ARW+ EEGL LDV TGGELAVALHA FPPERIT HGNNKSV+
Sbjct 87 GGGHNVCYAAKAFLCSEIARWVDEEGLSLDVSTGGELAVALHAGFPPERITFHGNNKSVA 146
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
ELT+AVK GVG++V+DS+TEIERLDAIAGEAG+VQDV VRLTVGVEAHTHEFISTAHEDQ
Sbjct 147 ELTSAVKVGVGYVVLDSITEIERLDAIAGEAGVVQDVYVRLTVGVEAHTHEFISTAHEDQ 206
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFGLSVASGAAM AVRRVFATDHLRLVGLHSHIGSQIFDVDGFE+AAHRVIGLL + E
Sbjct 207 KFGLSVASGAAMDAVRRVFATDHLRLVGLHSHIGSQIFDVDGFEVAAHRVIGLLHHIADE 266
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
FG +K Q++TVDLGGGLGISYL +DDPPP+AELAAKL IV ES AVGLPTP+LVVEP
Sbjct 267 FGVDKAGQVSTVDLGGGLGISYLGTDDPPPVAELAAKLTAIVGSESAAVGLPTPRLVVEP 326
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGTITLYEVGTVKDVDVS+ A RRYVSVDGGMSDNIRTALY AQYD RLVSR S
Sbjct 327 GRAIAGPGTITLYEVGTVKDVDVSSIAQRRYVSVDGGMSDNIRTALYDAQYDARLVSRAS 386
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
DAP AR+VGKHCE+GDI+VRDTWVPDD+RPGDL+AVAATGAYCYSLSSRYNM+ RPAV
Sbjct 387 DAPATLARIVGKHCETGDIVVRDTWVPDDLRPGDLLAVAATGAYCYSLSSRYNMICRPAV 446
Query 422 VAVHAGNARLVLRRETVDDLLSLEVR 447
VAV G +RL+LRRETVDDLLSLEVR
Sbjct 447 VAVRDGRSRLILRRETVDDLLSLEVR 472
>gi|254821292|ref|ZP_05226293.1| LysA_2 [Mycobacterium intracellulare ATCC 13950]
Length=472
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/446 (85%), Positives = 403/446 (91%), Gaps = 0/446 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
ELL LAPNVWPRNTTRDE GV IAG+ +T LAQEYGTPLFV+DEDDFRSRCRE A+AF
Sbjct 27 EELLLLAPNVWPRNTTRDEGGVASIAGVAVTDLAQEYGTPLFVVDEDDFRSRCREIASAF 86
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G G NVHYAAKAFLCSE+ARWI EEGL LDVCTGGELAVALHA+FPPERIT HGNNKSV+
Sbjct 87 GGGKNVHYAAKAFLCSEIARWIDEEGLSLDVCTGGELAVALHANFPPERITFHGNNKSVA 146
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
ELTAAVKAGVGH+V+DSMTEIERL+ IAGEAGIVQDV VRLTVGVEAHTHEFISTAHEDQ
Sbjct 147 ELTAAVKAGVGHVVLDSMTEIERLNTIAGEAGIVQDVFVRLTVGVEAHTHEFISTAHEDQ 206
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFGLSVASGAA+AAV RVF +HLR+VGLHSHIGSQIFDV GFELAA RV+GLL + V +
Sbjct 207 KFGLSVASGAALAAVGRVFEAEHLRVVGLHSHIGSQIFDVAGFELAARRVLGLLHEAVEQ 266
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
FG EKTAQI+TVDLGGGLGISYL +DDPPP+ ELAAKL IV +ES AVGLPTP+LVVEP
Sbjct 267 FGVEKTAQISTVDLGGGLGISYLAADDPPPMGELAAKLSAIVKNESEAVGLPTPRLVVEP 326
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALY AQYD RLVSR+S
Sbjct 327 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYDAQYDARLVSRLS 386
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
DAP AR+VGKHCESGDI+VRDTWVP D+ PGDL+ VAATGAYCYSLSSRYNMV RPAV
Sbjct 387 DAPAELARVVGKHCESGDIVVRDTWVPGDLHPGDLIGVAATGAYCYSLSSRYNMVCRPAV 446
Query 422 VAVHAGNARLVLRRETVDDLLSLEVR 447
VAV ARL+LRRETVDDLLSLEVR
Sbjct 447 VAVRDRRARLLLRRETVDDLLSLEVR 472
>gi|118467936|ref|YP_889210.1| diaminopimelate decarboxylase [Mycobacterium smegmatis str. MC2
155]
gi|13124107|sp|Q9X5M1.1|DCDA_MYCS2 RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase;
Short=DAPDC
gi|4894689|gb|AAD32591.1|AF126720_2 meso-diaminopimelate decarboxylase [Mycobacterium smegmatis str.
MC2 155]
gi|118169223|gb|ABK70119.1| diaminopimelate decarboxylase [Mycobacterium smegmatis str. MC2
155]
Length=474
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/446 (81%), Positives = 397/446 (90%), Gaps = 0/446 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
+E++ LAPNVWPRN R GVV IAG+P+T LA ++GTPLFVIDEDDFR+RCR+ AAAF
Sbjct 27 DEIMLLAPNVWPRNLVRGADGVVTIAGVPVTDLAAKFGTPLFVIDEDDFRTRCRDIAAAF 86
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G G VHYAAKAFLCSE+ARW+ EEGL LDV TGGELAVALHA FP RIT+HGNNKSV+
Sbjct 87 GGGQYVHYAAKAFLCSEIARWVDEEGLSLDVATGGELAVALHAGFPASRITVHGNNKSVA 146
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
ELTAAV+AGVGH+V+DS EIERLD IAG AG+VQDVLVR+TVGVEAHTHEFISTAHEDQ
Sbjct 147 ELTAAVQAGVGHVVLDSEIEIERLDQIAGAAGVVQDVLVRVTVGVEAHTHEFISTAHEDQ 206
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFGLS+A+GAAM A+RRVFATD+LRLVGLHSHIGSQIFDV GFE+AAHRVIGLLRDVV E
Sbjct 207 KFGLSLATGAAMNAIRRVFATDNLRLVGLHSHIGSQIFDVAGFEIAAHRVIGLLRDVVAE 266
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
FG EKT+Q++ VDLGGGLGISYLP DDPPP+ ELA KL IV ES AVGLPTPKLVVEP
Sbjct 267 FGVEKTSQMSIVDLGGGLGISYLPHDDPPPMKELADKLLEIVRTESAAVGLPTPKLVVEP 326
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGTITLYEVGTVKDV VS TAHRRYVSVDGGMSDNIRT+LY AQYD RLVSRVS
Sbjct 327 GRAIAGPGTITLYEVGTVKDVAVSQTAHRRYVSVDGGMSDNIRTSLYAAQYDARLVSRVS 386
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
DAPP AR+VGKHCESGDI+VRDTWV DDI PGDL+ VAATGAYCYS+SSRYN++ RPAV
Sbjct 387 DAPPALARIVGKHCESGDIVVRDTWVSDDIAPGDLIGVAATGAYCYSMSSRYNLLCRPAV 446
Query 422 VAVHAGNARLVLRRETVDDLLSLEVR 447
VAV G ARLVLRRETV+DLLSLEV+
Sbjct 447 VAVADGQARLVLRRETVEDLLSLEVK 472
>gi|333989932|ref|YP_004522546.1| diaminopimelate decarboxylase LysA [Mycobacterium sp. JDM601]
gi|333485900|gb|AEF35292.1| diaminopimelate decarboxylase LysA [Mycobacterium sp. JDM601]
Length=472
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/446 (81%), Positives = 390/446 (88%), Gaps = 0/446 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
ELL LAPNVWPRN RD+ G V IAG+ +T LA EYGTPLFV+DEDDFR RCRE A AF
Sbjct 27 QELLELAPNVWPRNAVRDDDGQVSIAGVKVTDLAAEYGTPLFVVDEDDFRGRCREIAQAF 86
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G G +VHYAAKAFLCSE+ARWI +EGL LDV TGGELAVALHA FP RIT+HGNNKSV+
Sbjct 87 GGGDHVHYAAKAFLCSEIARWIDQEGLGLDVATGGELAVALHAGFPGPRITMHGNNKSVA 146
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
EL AAV AGVGHIV+DS+ EIERL+A+A AGIVQDVLVR+TVGVEAHTHEFISTAHEDQ
Sbjct 147 ELQAAVDAGVGHIVLDSLIEIERLEAVAAAAGIVQDVLVRVTVGVEAHTHEFISTAHEDQ 206
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFGLS+ASGAAM A+R+VFATDHLRLVGLHSHIGSQIFDV GFELAAHRVIGLLRDVV E
Sbjct 207 KFGLSLASGAAMGAIRKVFATDHLRLVGLHSHIGSQIFDVAGFELAAHRVIGLLRDVVAE 266
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
FG AQ++ +DLGGGLGISYLP DDPPP+ ELA KL IV DES AVGLPTP+LVVEP
Sbjct 267 FGAALAAQLSVIDLGGGLGISYLPQDDPPPMDELAGKLAAIVRDESAAVGLPTPQLVVEP 326
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGTITLYEVGTVKDVDVSATA RRYVSVDGGMSDNIR ALY A YDVRLVSR
Sbjct 327 GRAIAGPGTITLYEVGTVKDVDVSATARRRYVSVDGGMSDNIRPALYDAHYDVRLVSRDG 386
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
A PV AR+VGKHCE+GDIIVRDTWV +D+ PGDLVAVAATGAYCYS+SSRYN++ RPAV
Sbjct 387 TAQPVAARIVGKHCETGDIIVRDTWVTEDLVPGDLVAVAATGAYCYSMSSRYNLLTRPAV 446
Query 422 VAVHAGNARLVLRRETVDDLLSLEVR 447
VAV G ARL+LRRETVDDL+SLEVR
Sbjct 447 VAVRDGKARLMLRRETVDDLISLEVR 472
>gi|108800861|ref|YP_641058.1| diaminopimelate decarboxylase [Mycobacterium sp. MCS]
gi|119870001|ref|YP_939953.1| diaminopimelate decarboxylase [Mycobacterium sp. KMS]
gi|108771280|gb|ABG10002.1| diaminopimelate decarboxylase [Mycobacterium sp. MCS]
gi|119696090|gb|ABL93163.1| diaminopimelate decarboxylase [Mycobacterium sp. KMS]
Length=474
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/445 (80%), Positives = 394/445 (89%), Gaps = 0/445 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
+E+L LAPNVWPRN R GVV IAG+P+T +A ++GTP+F+IDE DFRSRCRE +AAF
Sbjct 27 DEVLRLAPNVWPRNAVRGADGVVSIAGVPVTDIAAQFGTPVFIIDEADFRSRCREISAAF 86
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G G V YAAKAFLC+EVARWI EEGL LDV +GGELAVALHA FP ERI LHGNNKS
Sbjct 87 GGGEYVRYAAKAFLCTEVARWIDEEGLALDVASGGELAVALHAGFPAERIALHGNNKSPD 146
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
EL AVK+GVGH+VVDSM EIERLD IA AG+VQDVLVR+TVGVEAHTHEFISTAHEDQ
Sbjct 147 ELALAVKSGVGHVVVDSMIEIERLDEIAAAAGVVQDVLVRVTVGVEAHTHEFISTAHEDQ 206
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFGLS+ASGAAMAAVRRVF TD+LRLVGLHSHIGSQIFDV GFELAAHRVIGLLRDVV E
Sbjct 207 KFGLSLASGAAMAAVRRVFETDNLRLVGLHSHIGSQIFDVAGFELAAHRVIGLLRDVVAE 266
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
FG +KTAQ++TVDLGGGLGISYLP DDPPP+A+LAAKL IV +ES AVGLPTPKLVVEP
Sbjct 267 FGVDKTAQMSTVDLGGGLGISYLPQDDPPPVADLAAKLSAIVREESAAVGLPTPKLVVEP 326
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGTITLYEVGTVKDV V++ +RRYVSVDGGMSDNIRT+LYGA+YDVRLVSRVS
Sbjct 327 GRAIAGPGTITLYEVGTVKDVAVASDRYRRYVSVDGGMSDNIRTSLYGAEYDVRLVSRVS 386
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
DA P +R+VGKHCESGDI+VRD W+ D+ PGDL+ VAATGAYCYS+SSRYN++GRPAV
Sbjct 387 DADPALSRVVGKHCESGDIVVRDAWLSGDVAPGDLLGVAATGAYCYSMSSRYNLIGRPAV 446
Query 422 VAVHAGNARLVLRRETVDDLLSLEV 446
VAV G+ARL+LRRETVDDLLSLEV
Sbjct 447 VAVRDGHARLILRRETVDDLLSLEV 471
>gi|126436459|ref|YP_001072150.1| diaminopimelate decarboxylase [Mycobacterium sp. JLS]
gi|126236259|gb|ABN99659.1| diaminopimelate decarboxylase [Mycobacterium sp. JLS]
Length=474
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/445 (80%), Positives = 394/445 (89%), Gaps = 0/445 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
+E+L +APNVWPRN R GVV IAG+P+T +A ++GTP+F+IDE DFRSRCRE +AAF
Sbjct 27 DEVLRIAPNVWPRNAVRGADGVVSIAGVPVTDIAAQFGTPVFIIDEADFRSRCREISAAF 86
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G G V YAAKAFLC+EVARWI EEGL LDV +GGELAVALHA FP ERI LHGNNKS
Sbjct 87 GGGEYVRYAAKAFLCTEVARWIDEEGLALDVASGGELAVALHAGFPAERIALHGNNKSPD 146
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
EL AVK+GVGH+VVDSM EIERLD IA AG+VQDVLVR+TVGVEAHTHEFISTAHEDQ
Sbjct 147 ELALAVKSGVGHVVVDSMIEIERLDEIAAAAGVVQDVLVRVTVGVEAHTHEFISTAHEDQ 206
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFGLS+ASGAAMAAVRRVF TD+LRLVGLHSHIGSQIFDV GFELAAHRVIGLLRDVV E
Sbjct 207 KFGLSLASGAAMAAVRRVFETDNLRLVGLHSHIGSQIFDVAGFELAAHRVIGLLRDVVAE 266
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
FG +KTAQ++TVDLGGGLGISYLP DDPPP+A+LAAKL IV +ES AVGLPTPKLVVEP
Sbjct 267 FGVDKTAQMSTVDLGGGLGISYLPQDDPPPVADLAAKLSAIVREESAAVGLPTPKLVVEP 326
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGTITLYEVGTVKDV V++ +RRYVSVDGGMSDNIRT+LYGA+YDVRLVSRVS
Sbjct 327 GRAIAGPGTITLYEVGTVKDVAVASDRYRRYVSVDGGMSDNIRTSLYGAEYDVRLVSRVS 386
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
DA P +R+VGKHCESGDI+VRD W+ D+ PGDL+ VAATGAYCYS+SSRYN++GRPAV
Sbjct 387 DADPALSRVVGKHCESGDIVVRDAWLSGDVAPGDLLGVAATGAYCYSMSSRYNLIGRPAV 446
Query 422 VAVHAGNARLVLRRETVDDLLSLEV 446
VAV G+ARL+LRRETVDDLLSLEV
Sbjct 447 VAVRDGHARLILRRETVDDLLSLEV 471
>gi|120405303|ref|YP_955132.1| diaminopimelate decarboxylase [Mycobacterium vanbaalenii PYR-1]
gi|119958121|gb|ABM15126.1| diaminopimelate decarboxylase [Mycobacterium vanbaalenii PYR-1]
Length=476
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/444 (79%), Positives = 389/444 (88%), Gaps = 0/444 (0%)
Query 3 ELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFG 62
E+L LAPNVWP+N R GVV IAG+ + +A E+GTP+FVIDE DFR+RCR+ AAAFG
Sbjct 28 EVLQLAPNVWPQNAVRGADGVVSIAGVSVADIAAEFGTPVFVIDEADFRARCRDIAAAFG 87
Query 63 SGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSE 122
G +V YAAKAFLC+EVARWI EEGL LDV +GGELAVALHA FP ERI LHGNNKSV+E
Sbjct 88 GGEHVRYAAKAFLCTEVARWIDEEGLSLDVASGGELAVALHAGFPAERIALHGNNKSVAE 147
Query 123 LTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQK 182
LTAAV+AG+ H+VVDSMTEI+RLD IAGEAG+VQDVL+R+TVGVEAHTHEFISTAHEDQK
Sbjct 148 LTAAVEAGIEHVVVDSMTEIDRLDKIAGEAGVVQDVLIRVTVGVEAHTHEFISTAHEDQK 207
Query 183 FGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEF 242
FGLS+ASGAAM AVRRVF TDHLRLVGLHSHIGSQIFDV GFELAAHRVIGLLRD V EF
Sbjct 208 FGLSLASGAAMTAVRRVFETDHLRLVGLHSHIGSQIFDVAGFELAAHRVIGLLRDAVAEF 267
Query 243 GPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPG 302
G EKT+Q++ VDLGGGLGISYLP DDPPP+ ELA KL IV ES AVGLP P+LVVEPG
Sbjct 268 GVEKTSQMSIVDLGGGLGISYLPHDDPPPMGELADKLHAIVRHESAAVGLPAPRLVVEPG 327
Query 303 RAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVSD 362
RAIAGPGTITLYEVGTVKDV +S+ +RRYVSVDGGMSDNIRT+LY A+YDVRLVSR S+
Sbjct 328 RAIAGPGTITLYEVGTVKDVAISSDRNRRYVSVDGGMSDNIRTSLYDAEYDVRLVSRTSN 387
Query 363 APPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVV 422
A P +R+VGKHCESGDI+VRD W+PDD+ PGDL+ VAATGAYCYS+SSRYN++GRPAVV
Sbjct 388 AEPTLSRVVGKHCESGDIVVRDAWIPDDVGPGDLLGVAATGAYCYSMSSRYNLIGRPAVV 447
Query 423 AVHAGNARLVLRRETVDDLLSLEV 446
AV G ARL+LRRET DDLLSLEV
Sbjct 448 AVRDGRARLILRRETFDDLLSLEV 471
>gi|145222885|ref|YP_001133563.1| diaminopimelate decarboxylase [Mycobacterium gilvum PYR-GCK]
gi|145215371|gb|ABP44775.1| diaminopimelate decarboxylase [Mycobacterium gilvum PYR-GCK]
Length=472
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/441 (79%), Positives = 391/441 (89%), Gaps = 0/441 (0%)
Query 7 LAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFGSGAN 66
LAPNVWP+NT R + G V IAG+P+ +A E+GTP+FVIDE DFRSRCR+ ++AFG G
Sbjct 32 LAPNVWPQNTVRGDDGAVSIAGVPVADIAAEFGTPVFVIDEADFRSRCRDISSAFGGGEY 91
Query 67 VHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAA 126
VHYAAKAFLC E+ARW+ EEGL LDV TGGELAVALHA FP ERIT+HGNNKSV+ELTAA
Sbjct 92 VHYAAKAFLCGEIARWVDEEGLSLDVATGGELAVALHAGFPAERITVHGNNKSVAELTAA 151
Query 127 VKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLS 186
VK GVGH+VVDSM EIERLD IA + G+VQDVLVR+TVGVEAHTHEFISTAHEDQKFGLS
Sbjct 152 VKHGVGHVVVDSMIEIERLDRIAADNGVVQDVLVRVTVGVEAHTHEFISTAHEDQKFGLS 211
Query 187 VASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEK 246
+ASGAAM AVRRVF +LRLVGLHSHIGSQIFDV GFE+AAHRVIGLLRDVV EFG EK
Sbjct 212 LASGAAMEAVRRVFEAGNLRLVGLHSHIGSQIFDVAGFEIAAHRVIGLLRDVVAEFGVEK 271
Query 247 TAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIA 306
T+Q+ VDLGGGLGISYLP D+PPP++ELAAKL IV+ ES AVGLP PKLVVEPGRAIA
Sbjct 272 TSQMDIVDLGGGLGISYLPDDNPPPMSELAAKLRAIVARESAAVGLPAPKLVVEPGRAIA 331
Query 307 GPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVSDAPPV 366
GPGTITLYEVGTVKDV VS T+HRRYVSVDGGMSDNIRT+LYGA+YDVRL+SRVSDA P
Sbjct 332 GPGTITLYEVGTVKDVAVSPTSHRRYVSVDGGMSDNIRTSLYGAEYDVRLLSRVSDATPT 391
Query 367 PARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHA 426
+R+VGKHCESGDI+VRD W+ +D+RPGDL+ VAATGAYCYS+SSRYN++GRPAVVAV
Sbjct 392 LSRVVGKHCESGDIVVRDAWLSEDVRPGDLLGVAATGAYCYSMSSRYNLIGRPAVVAVRD 451
Query 427 GNARLVLRRETVDDLLSLEVR 447
G ARL+LRRETV+DLLSLEVR
Sbjct 452 GRARLILRRETVEDLLSLEVR 472
>gi|333920935|ref|YP_004494516.1| diaminopimelate decarboxylase [Amycolicicoccus subflavus DQS3-9A1]
gi|333483156|gb|AEF41716.1| Diaminopimelate decarboxylase [Amycolicicoccus subflavus DQS3-9A1]
Length=472
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/436 (77%), Positives = 382/436 (88%), Gaps = 0/436 (0%)
Query 11 VWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFGSGANVHYA 70
VWPRN RDE GVV IAG+ +T LA++YGTPLFV+DEDDFRSRCRE A+AFG+ VHYA
Sbjct 36 VWPRNAVRDESGVVAIAGVRITDLAKQYGTPLFVVDEDDFRSRCREIASAFGAPERVHYA 95
Query 71 AKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAG 130
+KAFL S VARW++EEGL +DVC+GGELAVALH FPPERI LHGNNKSV+EL AV++G
Sbjct 96 SKAFLSSHVARWVAEEGLSIDVCSGGELAVALHGGFPPERIALHGNNKSVAELEYAVRSG 155
Query 131 VGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASG 190
VGH+V+DS EI+RLD IA G+VQDVL+R+TVGVEAHTHEFI+TAHEDQKFG S+A G
Sbjct 156 VGHVVLDSAIEIDRLDRIAAGEGVVQDVLIRITVGVEAHTHEFIATAHEDQKFGFSLAGG 215
Query 191 AAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQI 250
AA+ AVRRVFATD+LRLVGLHSHIGSQIFDVDGFELAAHRVIGLLR+VV EFG EKT QI
Sbjct 216 AALDAVRRVFATDNLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLREVVSEFGVEKTQQI 275
Query 251 ATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGT 310
+ +DLGGGLGI+YLPSDDPPP+ ELAA L IV ES VGL P L VEPGRAIAGPGT
Sbjct 276 SMIDLGGGLGIAYLPSDDPPPVDELAASLLRIVESESERVGLSAPVLTVEPGRAIAGPGT 335
Query 311 ITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVSDAPPVPARL 370
+T+YEVGTVKDV + A A RRY+SVDGGMSDNIRT+LYGA+YDVRLVSR S+A PV AR+
Sbjct 336 VTVYEVGTVKDVKLGAHAQRRYLSVDGGMSDNIRTSLYGAEYDVRLVSRRSEAHPVVARI 395
Query 371 VGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHAGNAR 430
VGKHCE+GDI++RDTW+PDD+ PGDL+AVAATGAYCYS+SSRYNM+GRPAVVAV G AR
Sbjct 396 VGKHCETGDIVIRDTWMPDDVGPGDLLAVAATGAYCYSMSSRYNMLGRPAVVAVRDGKAR 455
Query 431 LVLRRETVDDLLSLEV 446
L+LRRE+VDDLLSLEV
Sbjct 456 LMLRRESVDDLLSLEV 471
>gi|111018490|ref|YP_701462.1| diaminopimelate decarboxylase [Rhodococcus jostii RHA1]
gi|110818020|gb|ABG93304.1| diaminopimelate decarboxylase [Rhodococcus jostii RHA1]
Length=473
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/441 (76%), Positives = 384/441 (88%), Gaps = 0/441 (0%)
Query 7 LAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFGSGAN 66
L+P VWPRN R GVV +AGIP+T+LA++YGTPLFV+DEDDFRSRCR+ A AFG A
Sbjct 32 LSPEVWPRNAHRGADGVVSLAGIPVTELAEKYGTPLFVVDEDDFRSRCRDMARAFGPTAK 91
Query 67 VHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAA 126
VHYA+KAFLC E+ARW+++EGL LDV +GGELAVALHA FP ERI +HGNNKSV+EL AA
Sbjct 92 VHYASKAFLCGEIARWVADEGLSLDVASGGELAVALHAGFPAERIAMHGNNKSVAELNAA 151
Query 127 VKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLS 186
V A VGHIV+DS TEI+RLD +A EAG+VQDVL+R+TVGVEAHTHEFISTAHEDQKFG S
Sbjct 152 VSARVGHIVLDSATEIDRLDKVAAEAGVVQDVLIRVTVGVEAHTHEFISTAHEDQKFGFS 211
Query 187 VASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEK 246
+A G A+ AVRRVFA +LRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVV EFG EK
Sbjct 212 LAGGKAIDAVRRVFAAGNLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVAEFGVEK 271
Query 247 TAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIA 306
TAQI+ +DLGGG+GISY+PSDDPPP+ +LAAKLG IV +ES GLP P L VEPGRAIA
Sbjct 272 TAQISIIDLGGGMGISYVPSDDPPPVDQLAAKLGDIVRNESALAGLPEPTLAVEPGRAIA 331
Query 307 GPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVSDAPPV 366
GPGT+TLYEVGT+KDV V A RRYVSVDGGMSDNIRTALY A+Y+ +LVSRVSDA PV
Sbjct 332 GPGTVTLYEVGTIKDVTVGANLTRRYVSVDGGMSDNIRTALYQAEYEAKLVSRVSDAAPV 391
Query 367 PARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHA 426
+R+VGKHCESGD+++RDTW+P+DI GDL+AVAATGAYCYS+SSRYN++ RPAVVAV
Sbjct 392 VSRVVGKHCESGDVVIRDTWMPEDIDAGDLLAVAATGAYCYSMSSRYNLLARPAVVAVRD 451
Query 427 GNARLVLRRETVDDLLSLEVR 447
G +R++LRRETV+DLLSLEV+
Sbjct 452 GQSRVILRRETVEDLLSLEVQ 472
>gi|226360613|ref|YP_002778391.1| diaminopimelate decarboxylase [Rhodococcus opacus B4]
gi|226239098|dbj|BAH49446.1| diaminopimelate decarboxylase [Rhodococcus opacus B4]
Length=473
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/441 (75%), Positives = 386/441 (88%), Gaps = 0/441 (0%)
Query 7 LAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFGSGAN 66
L+P+VWPRN R + GVV +AGIP+T+LA++YGTPLFV+DEDDFRSRCR+ A AFG A
Sbjct 32 LSPDVWPRNARRADDGVVSLAGIPVTELAEKYGTPLFVVDEDDFRSRCRDMARAFGPAAK 91
Query 67 VHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAA 126
VHYA+KAFLC E+ARW+++EGL LDV +GGELAVALHA FP RI +HGNNKSV+EL AA
Sbjct 92 VHYASKAFLCGEIARWVADEGLSLDVASGGELAVALHAGFPAGRIAMHGNNKSVAELNAA 151
Query 127 VKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLS 186
V AGVGHIV+DS TEI+RLD +A EAG+VQDVL+R+TVGVEAHTHEFISTAHEDQKFG S
Sbjct 152 VSAGVGHIVLDSATEIDRLDKVAAEAGVVQDVLIRVTVGVEAHTHEFISTAHEDQKFGFS 211
Query 187 VASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEK 246
+A G A+ AVRRVFA D+LRLVGLHSHIGSQIFDVDGFE+AAHRVIGLLRDVV EFG +K
Sbjct 212 LAGGKAIDAVRRVFAADNLRLVGLHSHIGSQIFDVDGFEVAAHRVIGLLRDVVAEFGVDK 271
Query 247 TAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIA 306
TAQI+ +DLGGG+GISY+P+DDPPP+ +LAAKLG IV ES GLP P L VEPGRAIA
Sbjct 272 TAQISIIDLGGGMGISYVPTDDPPPVDQLAAKLGDIVRHESALAGLPEPTLAVEPGRAIA 331
Query 307 GPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVSDAPPV 366
GPGT+TLYEVGT+KDV V + RRYVSVDGGMSDNIRTALY A+Y+ +LVSRVSDA PV
Sbjct 332 GPGTVTLYEVGTIKDVTVGSNLTRRYVSVDGGMSDNIRTALYQAEYEAKLVSRVSDAAPV 391
Query 367 PARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHA 426
+R+VGKHCESGDI++RDTW+P+DI GDL+AVAATGAYCYS+SSRYN++ RPAVVAV
Sbjct 392 VSRVVGKHCESGDIVIRDTWMPEDIDAGDLLAVAATGAYCYSMSSRYNLLARPAVVAVRD 451
Query 427 GNARLVLRRETVDDLLSLEVR 447
G +R++LRRETV+DLLSLEV+
Sbjct 452 GQSRVILRRETVEDLLSLEVQ 472
>gi|315443350|ref|YP_004076229.1| diaminopimelate decarboxylase [Mycobacterium sp. Spyr1]
gi|315261653|gb|ADT98394.1| diaminopimelate decarboxylase [Mycobacterium sp. Spyr1]
Length=472
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/441 (79%), Positives = 389/441 (89%), Gaps = 0/441 (0%)
Query 7 LAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFGSGAN 66
LAPNVWP+NT R G V IAG+P+ ++A E+GTP+FVIDE DFRSRCR+ ++AFG G
Sbjct 32 LAPNVWPQNTVRGNDGAVSIAGVPVAEIAAEFGTPVFVIDEADFRSRCRDISSAFGGGEY 91
Query 67 VHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAA 126
VHYAAKAFLC E+ARW+ EEGL LDV TGGELA+ALHA FP RIT+HGNNKSV+ELTAA
Sbjct 92 VHYAAKAFLCGEIARWVDEEGLSLDVATGGELAIALHAGFPAGRITVHGNNKSVAELTAA 151
Query 127 VKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLS 186
VK GVGH+VVDS+ EIERLD IA + G+VQDVLVR+TVGVEAHTHEFISTAHEDQKFGLS
Sbjct 152 VKHGVGHVVVDSIIEIERLDRIAADNGVVQDVLVRVTVGVEAHTHEFISTAHEDQKFGLS 211
Query 187 VASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEK 246
+ASGAAM AVRRVF +LRLVGLHSHIGSQIFDV GFE+AAHRVIGLLRDVV EFG EK
Sbjct 212 LASGAAMEAVRRVFEAGNLRLVGLHSHIGSQIFDVAGFEIAAHRVIGLLRDVVAEFGVEK 271
Query 247 TAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIA 306
T+Q+ VDLGGGLGISYLP D+PPP++ELAAKL IV+ ES AVGLP PKLVVEPGRAIA
Sbjct 272 TSQMDIVDLGGGLGISYLPDDNPPPMSELAAKLKAIVARESAAVGLPAPKLVVEPGRAIA 331
Query 307 GPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVSDAPPV 366
GPGTITLYEVGTVKDV VS T+HRRYVSVDGGMSDNIRT+LYGA+YDVRL+SRVSDA P
Sbjct 332 GPGTITLYEVGTVKDVAVSPTSHRRYVSVDGGMSDNIRTSLYGAEYDVRLLSRVSDATPT 391
Query 367 PARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHA 426
+R+VGKHCESGDI+VRD W+ +D+ PGDL+ VAATGAYCYS+SSRYN++GRPAVVAV
Sbjct 392 LSRVVGKHCESGDIVVRDAWLSEDVTPGDLLGVAATGAYCYSMSSRYNLIGRPAVVAVRD 451
Query 427 GNARLVLRRETVDDLLSLEVR 447
G ARL+LRRETV+DLLSLEVR
Sbjct 452 GRARLILRRETVEDLLSLEVR 472
>gi|229490040|ref|ZP_04383893.1| diaminopimelate decarboxylase [Rhodococcus erythropolis SK121]
gi|229323141|gb|EEN88909.1| diaminopimelate decarboxylase [Rhodococcus erythropolis SK121]
Length=473
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/441 (74%), Positives = 386/441 (88%), Gaps = 0/441 (0%)
Query 6 HLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFGSGA 65
L+P VWPRN +R + G V +AG+ + +LA++YGTPLFVIDEDDFRSRCR+ A AFG A
Sbjct 31 ELSPQVWPRNASRGDDGEVTLAGVKVGELAEKYGTPLFVIDEDDFRSRCRDMARAFGPDA 90
Query 66 NVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTA 125
VHYA+KAFLC E+ARW+++EGL LDVC+GGELA+ALHA FP ERI +HGNNKSV+EL A
Sbjct 91 KVHYASKAFLCGEIARWVADEGLSLDVCSGGELAIALHADFPAERIAMHGNNKSVAELAA 150
Query 126 AVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGL 185
V AGVGH+V+DS EI+RLD +AGEAG+VQDVL+RLTVGVEAHTHEFISTAHEDQKFG
Sbjct 151 GVAAGVGHVVLDSSIEIDRLDRVAGEAGVVQDVLIRLTVGVEAHTHEFISTAHEDQKFGF 210
Query 186 SVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPE 245
S+A GAA+ AVRRVFA D+LRLVGLHSHIGSQIFDVDGFE+AAHRVIGLLRDVV EFG E
Sbjct 211 SLAGGAAIDAVRRVFAADNLRLVGLHSHIGSQIFDVDGFEVAAHRVIGLLRDVVTEFGVE 270
Query 246 KTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAI 305
KT QI+ +DLGGG+GISY+PSDDPPP+ ELAAKLG IV +ES GLP P L VEPGRAI
Sbjct 271 KTKQISIIDLGGGMGISYIPSDDPPPVDELAAKLGHIVRNESALAGLPEPTLAVEPGRAI 330
Query 306 AGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVSDAPP 365
AGPGT+TLYEVGT+KDV V ++ RRY+SVDGGMSDNIRT+LYGA+Y+ +LVSR S+A P
Sbjct 331 AGPGTVTLYEVGTIKDVTVGSSLTRRYISVDGGMSDNIRTSLYGAEYEAKLVSRTSEADP 390
Query 366 VPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVH 425
V AR+VGKHCESGD+++RDTW+P+D+ PGDL+AVAATGAYCYS+SSRYN++ RPAVVAV
Sbjct 391 VVARIVGKHCESGDVVIRDTWMPEDVGPGDLLAVAATGAYCYSMSSRYNLLTRPAVVAVR 450
Query 426 AGNARLVLRRETVDDLLSLEV 446
G +R++LRRETV+DLLSLEV
Sbjct 451 DGVSRVILRRETVEDLLSLEV 471
>gi|226307410|ref|YP_002767370.1| diaminopimelate decarboxylase [Rhodococcus erythropolis PR4]
gi|226186527|dbj|BAH34631.1| diaminopimelate decarboxylase [Rhodococcus erythropolis PR4]
Length=473
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/441 (74%), Positives = 386/441 (88%), Gaps = 0/441 (0%)
Query 6 HLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFGSGA 65
L+P VWPRN +R + G V +AG+ + +LA++YGTPLFVIDEDDFRSRCR+ A AFG A
Sbjct 31 ELSPQVWPRNASRGDDGEVTLAGVKVGELAEKYGTPLFVIDEDDFRSRCRDMARAFGPDA 90
Query 66 NVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTA 125
VHYA+KAFLC E+ARW+++EGL LDVC+GGELA+ALHA FP ERI +HGNNKSV+EL A
Sbjct 91 KVHYASKAFLCGEIARWVADEGLSLDVCSGGELAIALHADFPAERIAMHGNNKSVAELAA 150
Query 126 AVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGL 185
V AGVGH+V+DS EI+RLD +AGEAG+VQDVL+RLTVGVEAHTHEFISTAHEDQKFG
Sbjct 151 GVAAGVGHVVLDSAIEIDRLDRVAGEAGVVQDVLIRLTVGVEAHTHEFISTAHEDQKFGF 210
Query 186 SVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPE 245
S+A GAA+ AVRRVFA D+LRLVGLHSHIGSQIFDVDGFE+AAHRVIGLLRDVV EFG E
Sbjct 211 SLAGGAAIDAVRRVFAADNLRLVGLHSHIGSQIFDVDGFEVAAHRVIGLLRDVVTEFGVE 270
Query 246 KTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAI 305
KT QI+ +DLGGG+GISY+PSDDPPP+ ELAAKLG IV +ES GLP P L VEPGRAI
Sbjct 271 KTKQISIIDLGGGMGISYIPSDDPPPVDELAAKLGHIVRNESALAGLPEPTLAVEPGRAI 330
Query 306 AGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVSDAPP 365
AGPGT+TLYEVGT+KDV V ++ RRY+SVDGGMSDNIRT+LYGA+Y+ +LVSR S+A P
Sbjct 331 AGPGTVTLYEVGTIKDVTVGSSLTRRYISVDGGMSDNIRTSLYGAEYEAKLVSRTSEADP 390
Query 366 VPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVH 425
V AR+VGKHCESGD+++RDTW+P+D+ PGDL+AVAATGAYCYS+SSRYN++ RPAVVAV
Sbjct 391 VVARIVGKHCESGDVVIRDTWMPEDVGPGDLLAVAATGAYCYSMSSRYNLLTRPAVVAVR 450
Query 426 AGNARLVLRRETVDDLLSLEV 446
G +R++LRRETV+DLLSLEV
Sbjct 451 DGVSRVILRRETVEDLLSLEV 471
>gi|169628525|ref|YP_001702174.1| diaminopimelate decarboxylase [Mycobacterium abscessus ATCC 19977]
gi|169240492|emb|CAM61520.1| Probable diaminopimelate decarboxylase [Mycobacterium abscessus]
Length=470
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/440 (76%), Positives = 382/440 (87%), Gaps = 1/440 (0%)
Query 7 LAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFGSGAN 66
LA NVWPRN +R G V +AG+ +++LA++YGTPLFVIDEDDFRSRCR+ AAAFG A
Sbjct 30 LASNVWPRNASRGADGEVTLAGLAVSELAEQYGTPLFVIDEDDFRSRCRDMAAAFGGAAR 89
Query 67 VHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAA 126
VHYA+KAFLC+EVARWI +EGL LDVC+ GELAVAL A FPPERI LHGNNKS +EL A
Sbjct 90 VHYASKAFLCTEVARWIKDEGLGLDVCSAGELAVALRAEFPPERIALHGNNKSEAELAQA 149
Query 127 VKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLS 186
V+AGVGHIVVDSM EI+RLDAIAG AG+VQDVLVR+TVGVEAHTHEFISTAHEDQKFGLS
Sbjct 150 VQAGVGHIVVDSMIEIDRLDAIAGRAGVVQDVLVRVTVGVEAHTHEFISTAHEDQKFGLS 209
Query 187 VASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEK 246
+A G A+ AVRRVFATD+LRLVGLHSHIGSQIFDVDGFE+AAHRVIGLLRDVV EFG +K
Sbjct 210 LAGGQALEAVRRVFATDNLRLVGLHSHIGSQIFDVDGFEVAAHRVIGLLRDVVAEFGTDK 269
Query 247 TAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIA 306
TAQ+ +DLGGGLGISY+PSDDPPPI +LAAKLG IV ES GLP P+LV+EPGRAIA
Sbjct 270 TAQLNIIDLGGGLGISYVPSDDPPPIEDLAAKLGVIVRTESALAGLPGPRLVIEPGRAIA 329
Query 307 GPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVSDAPPV 366
GPGT+TLY VGT KDV +S RRYVSVDGGMSDNIRT+LY A+Y +LVSR SD PV
Sbjct 330 GPGTVTLYRVGTTKDVILS-NGQRRYVSVDGGMSDNIRTSLYQAEYHPQLVSRDSDVAPV 388
Query 367 PARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHA 426
+R+VGKHCESGDI+VRD W+P+D+ PGDL+AVAATGAYCYS+SSRYN++ RPAV+AV
Sbjct 389 LSRVVGKHCESGDIVVRDAWLPEDVAPGDLLAVAATGAYCYSMSSRYNLLTRPAVIAVKD 448
Query 427 GNARLVLRRETVDDLLSLEV 446
G ARL+LRRETV+DL+SLEV
Sbjct 449 GRARLILRRETVEDLVSLEV 468
>gi|312139160|ref|YP_004006496.1| diaminopimelate decarboxylase lysa [Rhodococcus equi 103S]
gi|311888499|emb|CBH47811.1| diaminopimelate decarboxylase LysA [Rhodococcus equi 103S]
Length=473
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/445 (74%), Positives = 382/445 (86%), Gaps = 0/445 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
+E+ L VWPR+ R GVV IAG+P+T+LA++YGTPLFV+DEDDFRSRCRE A AF
Sbjct 27 SEMTALPEQVWPRSAERGADGVVRIAGVPVTELAEKYGTPLFVVDEDDFRSRCREMARAF 86
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G VHYA+KAFL +E+ARW+ +EGL +DV +GGELAVALHA FP ERIT+HGNNKSV+
Sbjct 87 GGAERVHYASKAFLSAEIARWVRDEGLSMDVASGGELAVALHAGFPAERITMHGNNKSVA 146
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
EL AAV AGVGHIV+DSM EIERLD +A G+VQDVL+R+TVGVEAHTHEFI+TAHEDQ
Sbjct 147 ELDAAVAAGVGHIVLDSMVEIERLDEVAARRGVVQDVLIRITVGVEAHTHEFIATAHEDQ 206
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFG S++ G AMAAV RVF T +LRLVGLHSHIGSQIF+VDGFELAAHRVIGL+R++V
Sbjct 207 KFGFSLSGGKAMAAVARVFETGNLRLVGLHSHIGSQIFEVDGFELAAHRVIGLMREIVDR 266
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
FG EKT+Q++ VDLGGGLGISYLPSD+PPP+AELAAKL IV+ ES A GLP P L+VEP
Sbjct 267 FGAEKTSQLSMVDLGGGLGISYLPSDNPPPVAELAAKLAHIVATESAAAGLPVPTLMVEP 326
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGT+TLYEVGT+KDV + A A RRYVSVDGGMSDNIRT+LY A+YD RLVSR S
Sbjct 327 GRAIAGPGTVTLYEVGTIKDVTLDAGATRRYVSVDGGMSDNIRTSLYQAEYDARLVSRDS 386
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
D PV AR+VGKHCESGDI++RD W+PDD+ PGDL+AVAATGAYCYS+SSRYN++ RPAV
Sbjct 387 DGAPVVARVVGKHCESGDIVIRDAWMPDDLGPGDLLAVAATGAYCYSMSSRYNLLTRPAV 446
Query 422 VAVHAGNARLVLRRETVDDLLSLEV 446
VAV G +RL+LRRETV+DLLSLEV
Sbjct 447 VAVRDGASRLILRRETVEDLLSLEV 471
>gi|325673535|ref|ZP_08153226.1| diaminopimelate decarboxylase [Rhodococcus equi ATCC 33707]
gi|325555556|gb|EGD25227.1| diaminopimelate decarboxylase [Rhodococcus equi ATCC 33707]
Length=473
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/445 (74%), Positives = 382/445 (86%), Gaps = 0/445 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
+E+ L VWPR+ R GVV IAG+P+T+LA++YGTPLFV+DEDDFRSRCRE A AF
Sbjct 27 SEMTTLPEQVWPRSAERGADGVVRIAGVPVTELAEKYGTPLFVVDEDDFRSRCREMARAF 86
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G VHYA+KAFL +E+ARW+ +EGL +DV +GGELAVALHA FP ERIT+HGNNKSV+
Sbjct 87 GGAERVHYASKAFLSAEIARWVRDEGLSMDVASGGELAVALHAGFPAERITMHGNNKSVA 146
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
EL AAV AGVGHIV+DSM EIERLD +A G+VQDVL+R+TVGVEAHTHEFI+TAHEDQ
Sbjct 147 ELDAAVAAGVGHIVLDSMVEIERLDEVAARRGVVQDVLIRITVGVEAHTHEFIATAHEDQ 206
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFG S++ G AMAAV RVF T +LRLVGLHSHIGSQIF+VDGFELAAHRVIGL+R++V
Sbjct 207 KFGFSLSGGKAMAAVARVFETGNLRLVGLHSHIGSQIFEVDGFELAAHRVIGLMREIVDR 266
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
FG EKT+Q++ VDLGGGLGISYLPSD+PPP+AELAAKL IV+ ES A GLP P L+VEP
Sbjct 267 FGAEKTSQLSMVDLGGGLGISYLPSDNPPPVAELAAKLAHIVATESAAAGLPVPTLMVEP 326
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGT+TLYEVGT+KDV + A A RRYVSVDGGMSDNIRT+LY A+YD RLVSR S
Sbjct 327 GRAIAGPGTVTLYEVGTIKDVTLDAGATRRYVSVDGGMSDNIRTSLYQAEYDARLVSRDS 386
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
D PV AR+VGKHCESGDI++RD W+PDD+ PGDL+AVAATGAYCYS+SSRYN++ RPAV
Sbjct 387 DGAPVVARVVGKHCESGDIVIRDAWMPDDLGPGDLLAVAATGAYCYSMSSRYNLLTRPAV 446
Query 422 VAVHAGNARLVLRRETVDDLLSLEV 446
VAV G +RL+LRRETV+DLLSLEV
Sbjct 447 VAVRDGASRLILRRETVEDLLSLEV 471
>gi|343928051|ref|ZP_08767516.1| diaminopimelate decarboxylase [Gordonia alkanivorans NBRC 16433]
gi|343762059|dbj|GAA14442.1| diaminopimelate decarboxylase [Gordonia alkanivorans NBRC 16433]
Length=473
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/443 (73%), Positives = 371/443 (84%), Gaps = 0/443 (0%)
Query 4 LLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFGS 63
L L P VWPRN RDE G + IAG+P+++LA E+GTP F++DE DFRSRCR+ AAFG
Sbjct 29 LAALPPQVWPRNAARDESGELRIAGVPVSELAAEFGTPAFIVDEADFRSRCRDMMAAFGP 88
Query 64 GANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSEL 123
VHYA+KAFLCSEVARW++EEGL LDVC+GGELA+ALHA FP ERI LHGNNKS EL
Sbjct 89 FGRVHYASKAFLCSEVARWVNEEGLSLDVCSGGELAIALHAGFPAERIALHGNNKSPEEL 148
Query 124 TAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKF 183
AAV AG+GH+V+DSM EI+RLDAI+GE G+V DVLVR+TVGVEAHTHEFISTAHEDQKF
Sbjct 149 AAAVDAGIGHVVLDSMIEIDRLDAISGERGVVTDVLVRVTVGVEAHTHEFISTAHEDQKF 208
Query 184 GLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFG 243
G ++A G AM A+RRVFATD+LRLVGLHSHIGSQIFD+DGFELAAHRV+GLL DVV EFG
Sbjct 209 GFALAGGVAMQAIRRVFATDNLRLVGLHSHIGSQIFDMDGFELAAHRVLGLLHDVVDEFG 268
Query 244 PEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGR 303
EKT+Q++ VDLGGGLGISYL + P P+ ++A L IV ES AVGLP P + +EPGR
Sbjct 269 VEKTSQMSIVDLGGGLGISYLEEERPLPVQKVAETLAHIVRRESEAVGLPMPIIAIEPGR 328
Query 304 AIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVSDA 363
AIAGPGT+TLY VGTVKDV++ A RRY+SVDGGMSDNIRT LY A+YDVRLVSRVSDA
Sbjct 329 AIAGPGTVTLYRVGTVKDVELGGGATRRYISVDGGMSDNIRTVLYQAEYDVRLVSRVSDA 388
Query 364 PPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVA 423
V R+VGKHCESGDI+++D W+P+D+ PGDL+AVAATGAYCYS+SSRYNM RP VVA
Sbjct 389 RAVVCRVVGKHCESGDIVIKDCWLPEDLGPGDLIAVAATGAYCYSMSSRYNMTMRPPVVA 448
Query 424 VHAGNARLVLRRETVDDLLSLEV 446
V G ARL+LRRET+DD LSLEV
Sbjct 449 VADGAARLMLRRETIDDFLSLEV 471
>gi|319948887|ref|ZP_08022999.1| diaminopimelate decarboxylase [Dietzia cinnamea P4]
gi|319437446|gb|EFV92454.1| diaminopimelate decarboxylase [Dietzia cinnamea P4]
Length=472
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/445 (72%), Positives = 370/445 (84%), Gaps = 0/445 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
++L+ LAP+VWPR R + GVV IAG+P+T+LA E+GTPLFVIDEDDFRSRCRE A AF
Sbjct 26 DDLMALAPSVWPRGARRRDDGVVEIAGVPVTELAAEFGTPLFVIDEDDFRSRCREMADAF 85
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G VHYA+KAFL +E ARW++EEGL LDV +GGELA+AL A FPPERIT+HGNNKS
Sbjct 86 GGAERVHYASKAFLTTETARWVAEEGLSLDVASGGELAIALRAGFPPERITVHGNNKSAD 145
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
EL AV++GV H+V+D+M+EIE LD IA E G+VQDV +R+TVGVEAHTHEFI+TAHEDQ
Sbjct 146 ELRYAVRSGVAHVVIDAMSEIELLDRIAREEGVVQDVFIRVTVGVEAHTHEFIATAHEDQ 205
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFG S+A GAAM AVR VFA H+RL GLHSHIGSQIFD+DGFELAA RVIGLLRD+V E
Sbjct 206 KFGFSLAGGAAMEAVRAVFAASHIRLTGLHSHIGSQIFDIDGFELAARRVIGLLRDIVDE 265
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
FG E+TAQ+ +DLGGGLGISY+PSDDPPP+A LAA L IV + GL P LVVEP
Sbjct 266 FGTERTAQLDHLDLGGGLGISYVPSDDPPPVARLAASLREIVEGFARDAGLTPPTLVVEP 325
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGT+T+YEVG VKDVD++ RRY+SVDGGMSDNIRTALY A YD RLV R S
Sbjct 326 GRAIAGPGTVTVYEVGVVKDVDLAGGEQRRYISVDGGMSDNIRTALYDAVYDARLVGRAS 385
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
A PV +RLVGKHCESGD++VRD W+P+D PGDLVAVAATGAYCYS+SSRYN++GRPAV
Sbjct 386 GAEPVVSRLVGKHCESGDVVVRDLWMPEDAGPGDLVAVAATGAYCYSMSSRYNLIGRPAV 445
Query 422 VAVHAGNARLVLRRETVDDLLSLEV 446
VAV G ARL+LRRET+DDL SLEV
Sbjct 446 VAVRDGRARLMLRRETLDDLTSLEV 470
>gi|262201840|ref|YP_003273048.1| diaminopimelate decarboxylase [Gordonia bronchialis DSM 43247]
gi|262085187|gb|ACY21155.1| diaminopimelate decarboxylase [Gordonia bronchialis DSM 43247]
Length=473
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/443 (70%), Positives = 369/443 (84%), Gaps = 0/443 (0%)
Query 4 LLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFGS 63
L + NV+PRN R+ G + IAG+ +++LA +YGTP+F++DE DFRSRC + +AFG
Sbjct 29 LAEIPANVFPRNAARNADGELEIAGVGVSELADKYGTPVFLVDEADFRSRCADMMSAFGP 88
Query 64 GANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSEL 123
VHYA+KAFLC+EVARW++EEGL LDVC+GGELA+AL A FPPERI LHGNNKSV+EL
Sbjct 89 YGRVHYASKAFLCTEVARWVNEEGLSLDVCSGGELAIALRAGFPPERIALHGNNKSVAEL 148
Query 124 TAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKF 183
TAA+ AGVGH+V+DS EIERLDA+AGE G+V DVLVR+TVGVEAHTHEFISTAHEDQKF
Sbjct 149 TAALDAGVGHVVLDSFVEIERLDALAGERGVVADVLVRVTVGVEAHTHEFISTAHEDQKF 208
Query 184 GLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFG 243
G ++A G AM AVRRVFATD+LRLVGLHSHIGSQIFD+DGFELAAHRV+GLL DVV EFG
Sbjct 209 GFALAGGVAMDAVRRVFATDNLRLVGLHSHIGSQIFDMDGFELAAHRVLGLLHDVVAEFG 268
Query 244 PEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGR 303
+KTAQ++ VDLGGGLGISYLP + P P+ +A KL IV ES+AVGLP P + VEPGR
Sbjct 269 VDKTAQMSIVDLGGGLGISYLPEERPLPVGTVAEKLAEIVRRESSAVGLPMPTIAVEPGR 328
Query 304 AIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVSDA 363
AIAGPGT+TLY VGT+KDV + + RRYVSVDGGMSDNIRT LY A+YDVRLVSRVS A
Sbjct 329 AIAGPGTVTLYRVGTIKDVALGGGSVRRYVSVDGGMSDNIRTVLYQAEYDVRLVSRVSTA 388
Query 364 PPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVA 423
V +R+VGKHCESGDI+++D W+P+D+ PGDL+AVAATGAYCYS+SSRYNM RP VVA
Sbjct 389 RAVVSRVVGKHCESGDIVIKDCWLPEDLEPGDLIAVAATGAYCYSMSSRYNMAMRPPVVA 448
Query 424 VHAGNARLVLRRETVDDLLSLEV 446
+ G R++LRRE +DD SLEV
Sbjct 449 IADGADRMLLRRENIDDFFSLEV 471
>gi|54023015|ref|YP_117257.1| putative diaminopimelate decarboxylase [Nocardia farcinica IFM
10152]
gi|54014523|dbj|BAD55893.1| putative diaminopimelate decarboxylase [Nocardia farcinica IFM
10152]
Length=473
Score = 632 bits (1631), Expect = 3e-179, Method: Compositional matrix adjust.
Identities = 316/445 (72%), Positives = 374/445 (85%), Gaps = 0/445 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
+++ L NVWPRN TRDE G V +AG+P+ +LA+++GTPLFV+DEDDFRSRCR+ AF
Sbjct 27 KQMIELPANVWPRNATRDEAGQVRLAGVPVRELAEQFGTPLFVVDEDDFRSRCRDMVRAF 86
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G A VHYA+KAFLC E+ARW+ +EGL LDVC+GGELA+ALHA FP ERI LHGNNKSV+
Sbjct 87 GPDARVHYASKAFLCGEIARWLRDEGLSLDVCSGGELAIALHAGFPAERIALHGNNKSVA 146
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
EL AAV AGVGH+VVDS+ EIERL+A+A AG+VQDVLVR+TVGVEAHTHE+ISTAHEDQ
Sbjct 147 ELEAAVAAGVGHVVVDSLIEIERLEAVAERAGVVQDVLVRVTVGVEAHTHEYISTAHEDQ 206
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFG S+A G AM A+ RVF +LRLVGLHSHIGSQIF++DGFE+AA R++GLLR +
Sbjct 207 KFGFSIAGGDAMEALARVFEASNLRLVGLHSHIGSQIFEIDGFEIAARRMLGLLRAAIDT 266
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
FG E+TAQI+T+DLGGGLGISYLP D+PPP+ E AAKL IV++E+ GLP P + VEP
Sbjct 267 FGVERTAQISTLDLGGGLGISYLPEDNPPPLDEFAAKLRAIVAEEAARAGLPEPTIAVEP 326
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGT+T+YEVGT+KDV + A RRYVSVDGGMSDNIR ALY A YD RLVSR S
Sbjct 327 GRAIAGPGTVTVYEVGTIKDVSLDAGLRRRYVSVDGGMSDNIRPALYQADYDCRLVSRPS 386
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
+A V AR+VGKHCESGDI++RDTW+P D+ PGDL+AVAATGAYCYS+SSRYN + RPAV
Sbjct 387 EAEAVLARVVGKHCESGDIVIRDTWMPADVGPGDLIAVAATGAYCYSMSSRYNQLTRPAV 446
Query 422 VAVHAGNARLVLRRETVDDLLSLEV 446
VAV G+ARLVLRRETV DLLSLEV
Sbjct 447 VAVRDGSARLVLRRETVADLLSLEV 471
>gi|326382075|ref|ZP_08203768.1| diaminopimelate decarboxylase [Gordonia neofelifaecis NRRL B-59395]
gi|326199501|gb|EGD56682.1| diaminopimelate decarboxylase [Gordonia neofelifaecis NRRL B-59395]
Length=473
Score = 620 bits (1600), Expect = 1e-175, Method: Compositional matrix adjust.
Identities = 307/445 (69%), Positives = 354/445 (80%), Gaps = 0/445 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
EL + NV+PR T RD+ GVV I G+ + QLA+EYGTPLFV DE DFRSRC + +AF
Sbjct 26 EELSRIPDNVYPRGTDRDDAGVVTIGGVSVEQLAEEYGTPLFVYDEADFRSRCADMQSAF 85
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G VHYA+KAFL ++VA+WI EGL LDVC+GGELA+AL A FPPERI LHGNNK+ S
Sbjct 86 GPYGRVHYASKAFLSTQVAKWIESEGLSLDVCSGGELAIALRAGFPPERIALHGNNKAES 145
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
EL AA+ AGVG IV+DSM EIERLD +AGE G+V DVLVR+T GVEAHTHEFISTAHEDQ
Sbjct 146 ELAAALDAGVGDIVLDSMVEIERLDRLAGERGVVADVLVRVTPGVEAHTHEFISTAHEDQ 205
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFG ++A G A+ AVR VFA D+LRLVGLHSHIGSQIF++DGFELAA RVIGLL DVV E
Sbjct 206 KFGFALAGGVALDAVRAVFAADNLRLVGLHSHIGSQIFEIDGFELAARRVIGLLADVVAE 265
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
FG EKT QI +DLGGGLGISYL SDDPPP++ LA L IV ES ++ LP P + VEP
Sbjct 266 FGVEKTKQIKVLDLGGGLGISYLESDDPPPVSVLAEALVEIVRRESESLNLPMPMIAVEP 325
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GR IAGP +TLY VGTVKDV + RRYVSVDGGMSDNIRT LY A+YDVRL SRVS
Sbjct 326 GRGIAGPAGVTLYRVGTVKDVALDGNTVRRYVSVDGGMSDNIRTVLYDAEYDVRLASRVS 385
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
+A V R+VGKHCESGDI++RD W+P+D+ PGDL+ V ATGAYCYS+SSRYNMV R AV
Sbjct 386 EAKAVVCRVVGKHCESGDIVIRDCWLPEDLAPGDLLVVGATGAYCYSMSSRYNMVPRAAV 445
Query 422 VAVHAGNARLVLRRETVDDLLSLEV 446
V+ G ARL+LRRETV+D LSLEV
Sbjct 446 ATVNDGRARLMLRRETVEDFLSLEV 470
>gi|296138956|ref|YP_003646199.1| diaminopimelate decarboxylase [Tsukamurella paurometabola DSM
20162]
gi|296027090|gb|ADG77860.1| diaminopimelate decarboxylase [Tsukamurella paurometabola DSM
20162]
Length=453
Score = 611 bits (1575), Expect = 9e-173, Method: Compositional matrix adjust.
Identities = 309/452 (69%), Positives = 356/452 (79%), Gaps = 9/452 (1%)
Query 4 LLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFGS 63
+ LAP VWP + R+ G V +AG+ LA+E+GTPLFVIDEDDFR RCR AFG
Sbjct 1 MSELAPGVWPTHARREADGGVSVAGVSARALAEEFGTPLFVIDEDDFRDRCRAMRDAFGD 60
Query 64 GANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSEL 123
A VHYA+KAFL E+ARW+ +EGL LDVC+GGELA+AL A FP +RI LHGNNKSV+EL
Sbjct 61 DAAVHYASKAFLSMEIARWVRDEGLNLDVCSGGELAIALRAGFPADRIALHGNNKSVAEL 120
Query 124 TAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKF 183
AV +G+GHIV+DS++EI RLDAIAGE G VQDVL+RLT GVEAHTHEFISTAHEDQKF
Sbjct 121 DYAVASGIGHIVIDSLSEIARLDAIAGERGSVQDVLIRLTPGVEAHTHEFISTAHEDQKF 180
Query 184 GLSVASGA----AMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVV 239
G S+AS AM AV VF D++RLVGLHSHIGSQIFDVDGFE+AA RV+ LLRD+V
Sbjct 181 GFSLASNEGDSPAMRAVTAVFEADNIRLVGLHSHIGSQIFDVDGFEIAARRVLELLRDIV 240
Query 240 GEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVV 299
FG EKTAQ+ T+DLGGGLGI+Y +DDPPP+A+LAAKL IV ES A+GL TP L V
Sbjct 241 TRFGAEKTAQLNTIDLGGGLGIAYTAADDPPPVADLAAKLRNIVETESAALGLQTPHLAV 300
Query 300 EPGRAIAGPGTITLYEVGTVKDV-----DVSATAHRRYVSVDGGMSDNIRTALYGAQYDV 354
EPGRAIAGP ITLYEVGT+KDV D A RRYVSVDGGMSDNIR ALYGA+Y V
Sbjct 301 EPGRAIAGPPGITLYEVGTIKDVVLDGKDERDPAFRRYVSVDGGMSDNIRPALYGAEYTV 360
Query 355 RLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYN 414
+ R + PVP+R+VGKHCE+GDI+VRDT PD + GDL+AVAATGAYCYS+SSRYN
Sbjct 361 AIADRDPEGAPVPSRIVGKHCETGDILVRDTTTPDGLAEGDLLAVAATGAYCYSMSSRYN 420
Query 415 MVGRPAVVAVHAGNARLVLRRETVDDLLSLEV 446
M RPAVVAV G ARL+LRRETVDDL+SLEV
Sbjct 421 MQPRPAVVAVKDGAARLILRRETVDDLVSLEV 452
>gi|134102735|ref|YP_001108396.1| diaminopimelate decarboxylase [Saccharopolyspora erythraea NRRL
2338]
gi|291007808|ref|ZP_06565781.1| diaminopimelate decarboxylase [Saccharopolyspora erythraea NRRL
2338]
gi|133915358|emb|CAM05471.1| diaminopimelate decarboxylase [Saccharopolyspora erythraea NRRL
2338]
Length=472
Score = 601 bits (1549), Expect = 9e-170, Method: Compositional matrix adjust.
Identities = 300/445 (68%), Positives = 351/445 (79%), Gaps = 0/445 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
++L L P+VWPRN R G AG+ + LA+EYGTPLFV+DEDDFRSRC + A AF
Sbjct 28 DDLDRLHPHVWPRNAARAADGSTGFAGVDVRDLAEEYGTPLFVLDEDDFRSRCADYAGAF 87
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G A+VHYA+KAFLC+EVARW++EEGL LDVC+GGEL VAL A FPPERITLHGNNKSV
Sbjct 88 GDPASVHYASKAFLCTEVARWVAEEGLSLDVCSGGELNVALRAEFPPERITLHGNNKSVP 147
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
ELTAAV+AGVG +V+DS EI RL+ IA E G+ QDV++R+TVGVEAHTHEFI+TAHEDQ
Sbjct 148 ELTAAVEAGVGSVVLDSFHEIARLEHIARERGVRQDVMIRVTVGVEAHTHEFIATAHEDQ 207
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFG S+ SG A AV RV + LRLVGLHSHIGSQIFD DGFELAAHRVI LL + E
Sbjct 208 KFGFSLTSGQAAEAVGRVLKAESLRLVGLHSHIGSQIFDDDGFELAAHRVIRLLAKMQEE 267
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
G E + ++TVDLGGGLGI+Y DDP P AELAA+L IV E GL P++ VEP
Sbjct 268 HGAEALSTVSTVDLGGGLGIAYTAEDDPLPPAELAARLNEIVRKECENAGLAAPRIAVEP 327
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGT+T+YEVGT+KDV + RRYVSVDGGMSDNIRT+LY A YD RLVSR +
Sbjct 328 GRAIAGPGTVTVYEVGTIKDVALDGGLQRRYVSVDGGMSDNIRTSLYDAVYDCRLVSRRA 387
Query 362 DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAV 421
+A V +R+VGKHCESGD++VRD W+P+DI PGDLVAVAATGAYCY ++S YN + +PAV
Sbjct 388 EARAVLSRIVGKHCESGDVVVRDCWLPEDIAPGDLVAVAATGAYCYVMASNYNRLPKPAV 447
Query 422 VAVHAGNARLVLRRETVDDLLSLEV 446
VAV G ARL+LRRET DDLL LEV
Sbjct 448 VAVRDGQARLLLRRETEDDLLRLEV 472
>gi|257056970|ref|YP_003134802.1| diaminopimelate decarboxylase [Saccharomonospora viridis DSM
43017]
gi|256586842|gb|ACU97975.1| diaminopimelate decarboxylase [Saccharomonospora viridis DSM
43017]
Length=479
Score = 582 bits (1499), Expect = 6e-164, Method: Compositional matrix adjust.
Identities = 293/451 (65%), Positives = 344/451 (77%), Gaps = 6/451 (1%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
EL L P VWPRNT R GVV IAG+ + +LA+ YGTPLFVIDE DF++RC E A AF
Sbjct 28 EELDRLYPKVWPRNTYRAPDGVVRIAGVDVRELARTYGTPLFVIDEVDFKARCAEYAEAF 87
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
A VHYAAKAFLC+EVARW++E+GL LDVC+GGELAVA A FPPERIT HGNNKS++
Sbjct 88 EDPALVHYAAKAFLCTEVARWVAEKGLSLDVCSGGELAVAQRAQFPPERITFHGNNKSLA 147
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
EL AAV+AGVG +V+DS EI RL IA G+VQ VLVR+TVGVEAHTHEFI+TAHEDQ
Sbjct 148 ELEAAVEAGVGLVVLDSYYEIARLAEIAQRHGVVQQVLVRVTVGVEAHTHEFIATAHEDQ 207
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFG S+ASG A AVRRV + L+LVGLHSHIGSQIFD DGFE+AA RV+GLL ++ E
Sbjct 208 KFGFSLASGDAAEAVRRVLNSPSLKLVGLHSHIGSQIFDTDGFEVAARRVVGLLAELRKE 267
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
GPE Q++ +DLGGG GISY D+PPP A++ ++ IV E LP P++ EP
Sbjct 268 HGPELIEQLSVIDLGGGFGISYTDRDNPPPPAQMITQIREIVRKECAFADLPVPRIAGEP 327
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAIAGPGT+TLYEVGT+KDV + RRYVSVDGGMSDNIRTALY A YD RLVSR S
Sbjct 328 GRAIAGPGTVTLYEVGTIKDVTLGEGTSRRYVSVDGGMSDNIRTALYDAAYDCRLVSRSS 387
Query 362 D------APPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNM 415
D V +R+VGKHCESGDI+VRD W+PD + PGDL+AVAATGAYCYS++S YN
Sbjct 388 DDGQPGEVKAVLSRVVGKHCESGDIVVRDCWLPDTLAPGDLLAVAATGAYCYSMASNYNK 447
Query 416 VGRPAVVAVHAGNARLVLRRETVDDLLSLEV 446
+PAVVAV GN RL+LRRET +D+ LEV
Sbjct 448 QPKPAVVAVRNGNHRLLLRRETNEDMFRLEV 478
>gi|302529808|ref|ZP_07282150.1| diaminopimelate decarboxylase [Streptomyces sp. AA4]
gi|302438703|gb|EFL10519.1| diaminopimelate decarboxylase [Streptomyces sp. AA4]
Length=479
Score = 567 bits (1461), Expect = 2e-159, Method: Compositional matrix adjust.
Identities = 291/452 (65%), Positives = 339/452 (75%), Gaps = 8/452 (1%)
Query 3 ELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFG 62
EL L VWPRN R GVV IAG+ + LAQ YGTPLFV+DE DF+SRC + A AF
Sbjct 28 ELDQLPAKVWPRNVYRAADGVVRIAGVDVRDLAQTYGTPLFVVDEADFKSRCADYAEAFD 87
Query 63 SGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSE 122
A VHYA+KAFL EVARW++E+GL LDVC+GGELAVAL A+FP ERIT HGNNKSV+E
Sbjct 88 DPALVHYASKAFLSVEVARWVAEQGLSLDVCSGGELAVALRANFPVERITFHGNNKSVAE 147
Query 123 LTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQK 182
L AAV+AGVG +VVDS EI RL IA I Q VLVR+TVGVEAHTHEFI+TAHEDQK
Sbjct 148 LDAAVEAGVGTVVVDSYYEIARLAEIAAAHEIEQKVLVRVTVGVEAHTHEFIATAHEDQK 207
Query 183 FGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEF 242
FG S+ASG A AVRRV L+LVGLHSHIGSQIFD DGFE+AA RV+GLL D+ E
Sbjct 208 FGFSLASGDAAEAVRRVLNAPSLKLVGLHSHIGSQIFDADGFEVAARRVVGLLADLAKEH 267
Query 243 GPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPG 302
GPE Q+ VDLGGG GI+Y D+PPP +++ ++ IV E LP P++ EPG
Sbjct 268 GPELLEQMNVVDLGGGFGIAYTEKDNPPPPSQMITQIREIVRKECAYAELPVPRIAGEPG 327
Query 303 RAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS- 361
RAIAGPGT TLYEVGT+KDV + RRYVSVDGGMSDNIRTALY A YD R+VSR +
Sbjct 328 RAIAGPGTFTLYEVGTIKDVALGDETARRYVSVDGGMSDNIRTALYDAVYDCRVVSRSAS 387
Query 362 -----DAPPVP--ARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYN 414
D P P +R+VGKHCESGDI+VRD W+PD + PGDL+AVAATGAYCY+++S YN
Sbjct 388 DTADGDDPATPTLSRVVGKHCESGDIVVRDCWLPDTLAPGDLLAVAATGAYCYAMASGYN 447
Query 415 MVGRPAVVAVHAGNARLVLRRETVDDLLSLEV 446
+ RPAVVAV G+ARL+LRRET DD+L LEV
Sbjct 448 RLPRPAVVAVRNGSARLLLRRETTDDMLRLEV 479
>gi|300789615|ref|YP_003769906.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32]
gi|299799129|gb|ADJ49504.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32]
gi|340531271|gb|AEK46476.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei S699]
Length=476
Score = 558 bits (1437), Expect = 9e-157, Method: Compositional matrix adjust.
Identities = 291/451 (65%), Positives = 346/451 (77%), Gaps = 5/451 (1%)
Query 1 VNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAA 60
V EL L VWPRNT R GVV IAG+ + +LA+++GTPLFV+DE DF+SRC + A A
Sbjct 26 VEELDKLPAKVWPRNTFRAADGVVRIAGVDVRELAEQHGTPLFVVDEADFKSRCADYAEA 85
Query 61 FGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSV 120
F + VHYA+KAFL E+ARW++E+GL LDVC+GGELAVA A FP ERIT HGNNKS
Sbjct 86 FDDPSLVHYASKAFLSIEIARWVAEQGLSLDVCSGGELAVAQRADFPAERITFHGNNKSP 145
Query 121 SELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHED 180
+EL AAV AGVG +V+DS EI RL IA +VQ VL+R+TVGVEAHTHEFI+TAHED
Sbjct 146 AELEAAVVAGVGTVVLDSYFEIARLADIAARHDVVQSVLIRVTVGVEAHTHEFIATAHED 205
Query 181 QKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVG 240
QKFG S+ASG A AVRRV L+LVGLHSHIGSQIFD DGFE+AA RV+GLL D+
Sbjct 206 QKFGFSLASGDAAEAVRRVLNARSLKLVGLHSHIGSQIFDADGFEVAARRVVGLLADLAK 265
Query 241 EFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVE 300
E GPE Q++ VDLGGG GI+Y D+PPP A++ ++ IV E GLP P++ E
Sbjct 266 EHGPELLDQLSLVDLGGGFGIAYTEKDNPPPPAQMITQIREIVRKECAYAGLPVPRIAGE 325
Query 301 PGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV 360
PGRAIAGPGTITLYEVGT+KDV + + RRYVSVDGGMSDNIRTALY A YDVRLVSR
Sbjct 326 PGRAIAGPGTITLYEVGTIKDVSLGDESARRYVSVDGGMSDNIRTALYDAVYDVRLVSRS 385
Query 361 S--DAPPVPA---RLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNM 415
+ + PVPA R+VGKHCESGDI+VRD W+PD + PGDL+AVAATGAYCYS++S YN
Sbjct 386 AGDNEQPVPAVLSRVVGKHCESGDIVVRDCWLPDTLAPGDLLAVAATGAYCYSMASTYNR 445
Query 416 VGRPAVVAVHAGNARLVLRRETVDDLLSLEV 446
+ RPAVVAV G++RL+LRRET DD+L LEV
Sbjct 446 MPRPAVVAVRNGSSRLLLRRETTDDMLRLEV 476
>gi|256380150|ref|YP_003103810.1| diaminopimelate decarboxylase [Actinosynnema mirum DSM 43827]
gi|255924453|gb|ACU39964.1| diaminopimelate decarboxylase [Actinosynnema mirum DSM 43827]
Length=474
Score = 546 bits (1408), Expect = 2e-153, Method: Compositional matrix adjust.
Identities = 289/447 (65%), Positives = 343/447 (77%), Gaps = 2/447 (0%)
Query 2 NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF 61
+EL L VWPRN R GVV + G+ + LA+E+GTPLFV+DE DFRSRC E AAAF
Sbjct 28 SELDALPERVWPRNAERRADGVVTLGGVDVRALAEEHGTPLFVMDEADFRSRCAEHAAAF 87
Query 62 GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVS 121
G + VHYA+KAFL VARW++EEGL +DVC+GGELA+AL A FPPERI LHGNNKSV+
Sbjct 88 GDPSLVHYASKAFLSVAVARWVAEEGLSIDVCSGGELAIALRAEFPPERIALHGNNKSVA 147
Query 122 ELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQ 181
EL AAV AGVG +V+DS EI RLD +A E G VQ V++R+TVGVEAHTHEFI+TAHEDQ
Sbjct 148 ELAAAVDAGVGVVVLDSFQEIARLDQVARERGRVQQVMIRVTVGVEAHTHEFIATAHEDQ 207
Query 182 KFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGE 241
KFG S++SG A A RRV + L LVGLHSHIGSQIFD GFE+AA RV+ LL ++ E
Sbjct 208 KFGFSLSSGDAAEAARRVVKAEGLSLVGLHSHIGSQIFDASGFEVAARRVVSLLAELRVE 267
Query 242 FGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEP 301
GP ++ T+DLGGGLGI+Y DDPPP A LAA+L IV+ E GLP PKL VEP
Sbjct 268 HGPALLDELTTLDLGGGLGIAYTADDDPPPPAVLAAQLRDIVAQECGRAGLPVPKLAVEP 327
Query 302 GRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVS 361
GRAI GPGT+TLYEVGT+KDV + A A RRYVSVDGGMSDNIRTALY A YD RLVSR +
Sbjct 328 GRAIVGPGTVTLYEVGTIKDVQLDAGATRRYVSVDGGMSDNIRTALYDAVYDCRLVSRAA 387
Query 362 D--APPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRP 419
+ + V R+VGKHCE+GD++VRD W+P D+ PGDLVAVAATGAYCYS++S YN + RP
Sbjct 388 EEGSEAVLCRVVGKHCEAGDVVVRDCWLPADLAPGDLVAVAATGAYCYSMASGYNRLPRP 447
Query 420 AVVAVHAGNARLVLRRETVDDLLSLEV 446
A+ AV G +RL+LRRET +DL LEV
Sbjct 448 ALAAVDGGRSRLLLRRETEEDLFRLEV 474
>gi|331695513|ref|YP_004331752.1| diaminopimelate decarboxylase [Pseudonocardia dioxanivorans CB1190]
gi|326950202|gb|AEA23899.1| diaminopimelate decarboxylase [Pseudonocardia dioxanivorans CB1190]
Length=499
Score = 536 bits (1382), Expect = 2e-150, Method: Compositional matrix adjust.
Identities = 288/454 (64%), Positives = 336/454 (75%), Gaps = 12/454 (2%)
Query 3 ELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFG 62
EL LA VWPRN R GVV IA + + LAQ YGTPLFV+DE DFRSR E AA+FG
Sbjct 30 ELDGLATAVWPRNAVRGADGVVRIADVDVRDLAQTYGTPLFVVDEADFRSRAAEFAASFG 89
Query 63 SGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSE 122
+ A VHYAAKAFL +E+ARW+++EGL +DV +GGELAVAL A FP ERI +HGNNKS +E
Sbjct 90 AEA-VHYAAKAFLSTEIARWVADEGLSMDVASGGELAVALRAGFPAERIAVHGNNKSATE 148
Query 123 LTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQK 182
L AV AGVG IVVDS EI RLDA+A +V V++R+TVGVEAHTHEFI+TAHEDQK
Sbjct 149 LDEAVAAGVGRIVVDSFHEIARLDAVARARDVVVPVMIRVTVGVEAHTHEFIATAHEDQK 208
Query 183 FGLSVASG---AAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVV 239
FG S++ G A A RRV A LRLVGLHSHIGSQIFD +GFE+AAHRV+ L +
Sbjct 209 FGFSISGGDTSPAAEAARRVLAARGLRLVGLHSHIGSQIFDTEGFEVAAHRVVRFLARLH 268
Query 240 GEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVV 299
E G + + T+DLGGG GI+Y + P +AELAA+L IV E A L P + V
Sbjct 269 AEHGADALEDLTTLDLGGGFGIAYRAEESPLDVAELAAQLRDIVKRECHAEDLDVPAIAV 328
Query 300 EPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSR 359
EPGRAIAGPGT+TLYEVGT+KDV + + A RRYVSVDGGMSDNIRTALY A YD RLVSR
Sbjct 329 EPGRAIAGPGTVTLYEVGTLKDVPLGSGA-RRYVSVDGGMSDNIRTALYDAVYDCRLVSR 387
Query 360 VS--DAPPVPA-----RLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSR 412
S D+P A R+VGKHCESGDI+VRD W+P D+ PGDL+AVAATGAYCYS++S
Sbjct 388 SSAADSPDGSADAALSRVVGKHCESGDIVVRDCWLPADLGPGDLLAVAATGAYCYSMASS 447
Query 413 YNMVGRPAVVAVHAGNARLVLRRETVDDLLSLEV 446
YN + RPAVVAV G ARL+LRRETVDD LEV
Sbjct 448 YNRLPRPAVVAVRDGRARLILRRETVDDQFRLEV 481
Lambda K H
0.319 0.136 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 924779221856
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40