BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1298

Length=80
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15608438|ref|NP_215814.1|  50S ribosomal protein L31 [Mycobact...   165    2e-39
gi|294994855|ref|ZP_06800546.1|  50S ribosomal protein L31 [Mycob...   153    9e-36
gi|240169516|ref|ZP_04748175.1|  50S ribosomal protein L31 [Mycob...   152    2e-35
gi|15827564|ref|NP_301827.1|  50S ribosomal protein L31 [Mycobact...   149    2e-34
gi|118619170|ref|YP_907502.1|  50S ribosomal protein L31 [Mycobac...   147    5e-34
gi|41408561|ref|NP_961397.1|  50S ribosomal protein L31 [Mycobact...   147    6e-34
gi|254821297|ref|ZP_05226298.1|  50S ribosomal protein L31 [Mycob...   139    1e-31
gi|342858041|ref|ZP_08714697.1|  50S ribosomal protein L31 [Mycob...   139    2e-31
gi|296170239|ref|ZP_06851832.1|  50S ribosomal protein L31 [Mycob...   135    2e-30
gi|169628532|ref|YP_001702181.1|  50S ribosomal protein L31 [Myco...   131    3e-29
gi|108800852|ref|YP_641049.1|  50S ribosomal protein L31 [Mycobac...   128    3e-28
gi|120405294|ref|YP_955123.1|  50S ribosomal protein L31 [Mycobac...   127    6e-28
gi|333989937|ref|YP_004522551.1|  50S ribosomal protein L31 RpmE ...   125    1e-27
gi|54023020|ref|YP_117262.1|  50S ribosomal protein L31 [Nocardia...   125    3e-27
gi|262201847|ref|YP_003273055.1|  50S ribosomal protein L31 [Gord...   124    6e-27
gi|343928058|ref|ZP_08767523.1|  50S ribosomal protein L31 [Gordo...   122    2e-26
gi|118469064|ref|YP_889203.1|  ribosomal protein L31 [Mycobacteri...   121    4e-26
gi|111018485|ref|YP_701457.1|  50S ribosomal protein L31 [Rhodoco...   120    5e-26
gi|333920930|ref|YP_004494511.1|  50S ribosomal protein L31 [Amyc...   120    5e-26
gi|296138962|ref|YP_003646205.1|  50S ribosomal protein L31 [Tsuk...   120    7e-26
gi|226307405|ref|YP_002767365.1|  50S ribosomal protein L31 [Rhod...   120    7e-26
gi|145222894|ref|YP_001133572.1|  50S ribosomal protein L31 [Myco...   120    8e-26
gi|312139165|ref|YP_004006501.1|  50S ribosomal protein l31 rpme ...   119    1e-25
gi|284992529|ref|YP_003411083.1|  50S ribosomal protein L31 [Geod...   117    4e-25
gi|331695518|ref|YP_004331757.1|  50S ribosomal protein L31 [Pseu...   117    7e-25
gi|257056965|ref|YP_003134797.1|  50S ribosomal protein L31P [Sac...   117    7e-25
gi|326382081|ref|ZP_08203774.1|  50S ribosomal protein L31P [Gord...   115    2e-24
gi|312194809|ref|YP_004014870.1|  ribosomal protein L31 [Frankia ...   115    2e-24
gi|317506165|ref|ZP_07963986.1|  ribosomal protein L31 [Segnilipa...   115    3e-24
gi|302529801|ref|ZP_07282143.1|  ribosomal protein L31 [Streptomy...   114    3e-24
gi|296393115|ref|YP_003657999.1|  50S ribosomal protein L31 [Segn...   113    8e-24
gi|284032946|ref|YP_003382877.1|  50S ribosomal protein L31 [Krib...   113    8e-24
gi|256825644|ref|YP_003149604.1|  50S ribosomal protein L31P [Kyt...   113    8e-24
gi|117927848|ref|YP_872399.1|  50S ribosomal protein L31P [Acidot...   112    2e-23
gi|256390406|ref|YP_003111970.1|  50S ribosomal protein L31 [Cate...   112    2e-23
gi|134102729|ref|YP_001108390.1|  50S ribosomal protein L31 [Sacc...   112    2e-23
gi|158312863|ref|YP_001505371.1|  50S ribosomal protein L31 [Fran...   112    2e-23
gi|336179680|ref|YP_004585055.1|  50S ribosomal protein L31 [Fran...   112    3e-23
gi|313827398|gb|EFS65112.1|  ribosomal protein L31 [Propionibacte...   111    3e-23
gi|86742402|ref|YP_482802.1|  50S ribosomal protein L31 [Frankia ...   111    4e-23
gi|325002819|ref|ZP_08123931.1|  50S ribosomal protein L31 [Pseud...   111    4e-23
gi|256380144|ref|YP_003103804.1|  50S ribosomal protein L31 [Acti...   110    6e-23
gi|258652311|ref|YP_003201467.1|  50S ribosomal protein L31 [Naka...   110    7e-23
gi|257069076|ref|YP_003155331.1|  50S ribosomal protein L31P [Bra...   110    8e-23
gi|50842732|ref|YP_055959.1|  50S ribosomal protein L31 [Propioni...   110    9e-23
gi|111225295|ref|YP_716089.1|  50S ribosomal protein L31 [Frankia...   110    9e-23
gi|289178288|gb|ADC85534.1|  LSU ribosomal protein L31P [Bifidoba...   110    9e-23
gi|84494540|ref|ZP_00993659.1|  50S ribosomal protein L31 [Janiba...   110    9e-23
gi|288922981|ref|ZP_06417138.1|  ribosomal protein L31 [Frankia s...   109    1e-22
gi|326771966|ref|ZP_08231251.1|  ribosomal protein L31 [Actinomyc...   108    2e-22


>gi|15608438|ref|NP_215814.1| 50S ribosomal protein L31 [Mycobacterium tuberculosis H37Rv]
 gi|15840748|ref|NP_335785.1| 50S ribosomal protein L31 [Mycobacterium tuberculosis CDC1551]
 gi|31792491|ref|NP_854984.1| 50S ribosomal protein L31 [Mycobacterium bovis AF2122/97]
 82 more sequence titles
 Length=80

 Score =  165 bits (418),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 80/80 (100%), Positives = 80/80 (100%), Gaps = 0/80 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60

Query  61  FEKRYGKRKVGADKAVSTGK  80
           FEKRYGKRKVGADKAVSTGK
Sbjct  61  FEKRYGKRKVGADKAVSTGK  80


>gi|294994855|ref|ZP_06800546.1| 50S ribosomal protein L31 [Mycobacterium tuberculosis 210]
Length=73

 Score =  153 bits (386),  Expect = 9e-36, Method: Compositional matrix adjust.
 Identities = 73/73 (100%), Positives = 73/73 (100%), Gaps = 0/73 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60

Query  61  FEKRYGKRKVGAD  73
           FEKRYGKRKVGAD
Sbjct  61  FEKRYGKRKVGAD  73


>gi|240169516|ref|ZP_04748175.1| 50S ribosomal protein L31 [Mycobacterium kansasii ATCC 12478]
Length=81

 Score =  152 bits (384),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 73/80 (92%), Positives = 75/80 (94%), Gaps = 0/80 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MKSDIHPAYEETTVVCGCGNTFQTRSTK GGRIVVEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKLGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60

Query  61  FEKRYGKRKVGADKAVSTGK  80
           FE+RYGKRKVGADK  +  K
Sbjct  61  FERRYGKRKVGADKDEAAAK  80


>gi|15827564|ref|NP_301827.1| 50S ribosomal protein L31 [Mycobacterium leprae TN]
 gi|221230041|ref|YP_002503457.1| 50S ribosomal protein L31 [Mycobacterium leprae Br4923]
 gi|1173026|sp|P45834.1|RL31_MYCLE RecName: Full=50S ribosomal protein L31
 gi|254801768|sp|B8ZR30.1|RL31_MYCLB RecName: Full=50S ribosomal protein L31
 gi|699331|gb|AAA63092.1| rpmE [Mycobacterium leprae]
 gi|13093114|emb|CAC31514.1| 50S ribosomal protein L31 [Mycobacterium leprae]
 gi|219933148|emb|CAR71228.1| 50S ribosomal protein L31 [Mycobacterium leprae Br4923]
Length=84

 Score =  149 bits (375),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 69/77 (90%), Positives = 73/77 (95%), Gaps = 0/77 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK++IHPAY ETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct  1   MKANIHPAYAETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60

Query  61  FEKRYGKRKVGADKAVS  77
           FEKRYGKRKVG D+  +
Sbjct  61  FEKRYGKRKVGVDQVAA  77


>gi|118619170|ref|YP_907502.1| 50S ribosomal protein L31 [Mycobacterium ulcerans Agy99]
 gi|183984070|ref|YP_001852361.1| 50S ribosomal protein L31 RpmE [Mycobacterium marinum M]
 gi|226708123|sp|B2HQL4.1|RL31_MYCMM RecName: Full=50S ribosomal protein L31
 gi|226708128|sp|A0PUL2.1|RL31_MYCUA RecName: Full=50S ribosomal protein L31
 gi|118571280|gb|ABL06031.1| 50S ribosomal protein L31 RpmE [Mycobacterium ulcerans Agy99]
 gi|183177396|gb|ACC42506.1| 50S ribosomal protein L31 RpmE [Mycobacterium marinum M]
Length=81

 Score =  147 bits (371),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 69/74 (94%), Positives = 70/74 (95%), Gaps = 0/74 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MKSDIHP YEETTVVCGCGNTFQTRSTK GGRIV EVCSQCHPFYTGKQKILDSGGRVAR
Sbjct  1   MKSDIHPTYEETTVVCGCGNTFQTRSTKQGGRIVAEVCSQCHPFYTGKQKILDSGGRVAR  60

Query  61  FEKRYGKRKVGADK  74
           FE+RYGKRK GADK
Sbjct  61  FERRYGKRKAGADK  74


>gi|41408561|ref|NP_961397.1| 50S ribosomal protein L31 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118465454|ref|YP_880754.1| 50S ribosomal protein L31 [Mycobacterium avium 104]
 gi|254774337|ref|ZP_05215853.1| 50S ribosomal protein L31 [Mycobacterium avium subsp. avium ATCC 
25291]
 gi|73621807|sp|Q73X47.1|RL31_MYCPA RecName: Full=50S ribosomal protein L31
 gi|226708118|sp|A0QCW6.1|RL31_MYCA1 RecName: Full=50S ribosomal protein L31
 gi|41396919|gb|AAS04780.1| RpmE [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118166741|gb|ABK67638.1| ribosomal protein L31 [Mycobacterium avium 104]
 gi|336460911|gb|EGO39794.1| ribosomal protein L31 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=80

 Score =  147 bits (371),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 70/80 (88%), Positives = 73/80 (92%), Gaps = 0/80 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK+DIHP Y ETTV+CGCGNTFQTRSTK GGRIVVEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct  1   MKADIHPTYAETTVLCGCGNTFQTRSTKDGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60

Query  61  FEKRYGKRKVGADKAVSTGK  80
           FEKRYGKRK GA+KA S  K
Sbjct  61  FEKRYGKRKAGAEKAESADK  80


>gi|254821297|ref|ZP_05226298.1| 50S ribosomal protein L31 [Mycobacterium intracellulare ATCC 
13950]
Length=76

 Score =  139 bits (351),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 65/72 (91%), Positives = 67/72 (94%), Gaps = 0/72 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK+DIHPAY ETTV+CGCGNTFQTRSTK GG I VEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct  1   MKADIHPAYAETTVLCGCGNTFQTRSTKEGGHITVEVCSQCHPFYTGKQKILDSGGRVAR  60

Query  61  FEKRYGKRKVGA  72
           FEKRYGKRK GA
Sbjct  61  FEKRYGKRKAGA  72


>gi|342858041|ref|ZP_08714697.1| 50S ribosomal protein L31 [Mycobacterium colombiense CECT 3035]
 gi|342135374|gb|EGT88540.1| 50S ribosomal protein L31 [Mycobacterium colombiense CECT 3035]
Length=76

 Score =  139 bits (349),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 65/72 (91%), Positives = 67/72 (94%), Gaps = 0/72 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK+DIHPAY ETTV+CGCGNTFQTRSTK GG IVVEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct  1   MKADIHPAYGETTVLCGCGNTFQTRSTKDGGHIVVEVCSQCHPFYTGKQKILDSGGRVAR  60

Query  61  FEKRYGKRKVGA  72
           FEKRYGKR  GA
Sbjct  61  FEKRYGKRNAGA  72


>gi|296170239|ref|ZP_06851832.1| 50S ribosomal protein L31 [Mycobacterium parascrofulaceum ATCC 
BAA-614]
 gi|295895115|gb|EFG74833.1| 50S ribosomal protein L31 [Mycobacterium parascrofulaceum ATCC 
BAA-614]
Length=78

 Score =  135 bits (340),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 65/72 (91%), Positives = 66/72 (92%), Gaps = 0/72 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK+DIHPAY ETTV CGCGNTF TRSTKPGG IVVEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct  1   MKTDIHPAYGETTVHCGCGNTFTTRSTKPGGNIVVEVCSQCHPFYTGKQKILDSGGRVAR  60

Query  61  FEKRYGKRKVGA  72
           FEKRYGKRK  A
Sbjct  61  FEKRYGKRKGAA  72


>gi|169628532|ref|YP_001702181.1| 50S ribosomal protein L31 [Mycobacterium abscessus ATCC 19977]
 gi|226708120|sp|B1MLV0.1|RL31_MYCA9 RecName: Full=50S ribosomal protein L31
 gi|169240499|emb|CAM61527.1| 50S ribosomal protein L31 [Mycobacterium abscessus]
Length=74

 Score =  131 bits (330),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 63/74 (86%), Positives = 63/74 (86%), Gaps = 0/74 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MKS IHP Y ET VVCGCGNTF TRSTK  G IVVEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct  1   MKSGIHPNYVETNVVCGCGNTFTTRSTKESGHIVVEVCSQCHPFYTGKQKILDSGGRVAR  60

Query  61  FEKRYGKRKVGADK  74
           FE RYGKRK  ADK
Sbjct  61  FEARYGKRKAAADK  74


>gi|108800852|ref|YP_641049.1| 50S ribosomal protein L31 [Mycobacterium sp. MCS]
 gi|119869992|ref|YP_939944.1| 50S ribosomal protein L31 [Mycobacterium sp. KMS]
 gi|126436450|ref|YP_001072141.1| 50S ribosomal protein L31 [Mycobacterium sp. JLS]
 6 more sequence titles
 Length=81

 Score =  128 bits (321),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 64/78 (83%), Positives = 67/78 (86%), Gaps = 2/78 (2%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK+ IHP Y ETTV CGCGNTF TRSTK  G IVVEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct  1   MKTGIHPDYVETTVQCGCGNTFTTRSTKKTGNIVVEVCSQCHPFYTGKQKILDSGGRVAR  60

Query  61  FEKRYGKRKVGADKAVST  78
           FEKRYGKR  GA+KA +T
Sbjct  61  FEKRYGKR--GANKAANT  76


>gi|120405294|ref|YP_955123.1| 50S ribosomal protein L31 [Mycobacterium vanbaalenii PYR-1]
 gi|226708129|sp|A1TD67.1|RL31_MYCVP RecName: Full=50S ribosomal protein L31
 gi|119958112|gb|ABM15117.1| LSU ribosomal protein L31P [Mycobacterium vanbaalenii PYR-1]
Length=74

 Score =  127 bits (319),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 61/74 (83%), Positives = 64/74 (87%), Gaps = 0/74 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MKS IHP Y ETTV+CGCG +F TRSTK  G+I VEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct  1   MKSGIHPDYVETTVLCGCGASFTTRSTKQSGQITVEVCSQCHPFYTGKQKILDSGGRVAR  60

Query  61  FEKRYGKRKVGADK  74
           FEKRYGKRK  ADK
Sbjct  61  FEKRYGKRKTTADK  74


>gi|333989937|ref|YP_004522551.1| 50S ribosomal protein L31 RpmE [Mycobacterium sp. JDM601]
 gi|333485905|gb|AEF35297.1| 50S ribosomal protein L31 RpmE [Mycobacterium sp. JDM601]
Length=80

 Score =  125 bits (315),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 60/69 (87%), Positives = 62/69 (90%), Gaps = 0/69 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK+ IHP Y ETTVVCGCGN+F TRSTK  G IVVEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct  1   MKTGIHPTYGETTVVCGCGNSFTTRSTKESGHIVVEVCSQCHPFYTGKQKILDSGGRVAR  60

Query  61  FEKRYGKRK  69
           FEKRYGKRK
Sbjct  61  FEKRYGKRK  69


>gi|54023020|ref|YP_117262.1| 50S ribosomal protein L31 [Nocardia farcinica IFM 10152]
 gi|73621810|sp|Q5Z0Z3.1|RL31_NOCFA RecName: Full=50S ribosomal protein L31
 gi|54014528|dbj|BAD55898.1| putative ribosomal protein L31 [Nocardia farcinica IFM 10152]
Length=76

 Score =  125 bits (313),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 58/68 (86%), Positives = 61/68 (90%), Gaps = 0/68 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK+ IHPAY +TTVVCGCGNTFQTRSTK  G I VEVCSQCHPFYTGKQKILD+GGRVAR
Sbjct  1   MKAGIHPAYVDTTVVCGCGNTFQTRSTKESGHITVEVCSQCHPFYTGKQKILDTGGRVAR  60

Query  61  FEKRYGKR  68
           FE RYGKR
Sbjct  61  FEARYGKR  68


>gi|262201847|ref|YP_003273055.1| 50S ribosomal protein L31 [Gordonia bronchialis DSM 43247]
 gi|262085194|gb|ACY21162.1| ribosomal protein L31 [Gordonia bronchialis DSM 43247]
Length=75

 Score =  124 bits (310),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 58/73 (80%), Positives = 61/73 (84%), Gaps = 0/73 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK  IHP Y  TTVVCGCGNTF+TRST   GRI VEVCSQCHPFYTGKQKILD+GGRVA+
Sbjct  1   MKQGIHPEYATTTVVCGCGNTFETRSTAANGRINVEVCSQCHPFYTGKQKILDTGGRVAK  60

Query  61  FEKRYGKRKVGAD  73
           FEKRYGKR   AD
Sbjct  61  FEKRYGKRTKNAD  73


>gi|343928058|ref|ZP_08767523.1| 50S ribosomal protein L31 [Gordonia alkanivorans NBRC 16433]
 gi|343762066|dbj|GAA14449.1| 50S ribosomal protein L31 [Gordonia alkanivorans NBRC 16433]
Length=70

 Score =  122 bits (305),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 57/68 (84%), Positives = 59/68 (87%), Gaps = 0/68 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK  IHP Y  TTVVCGCGNTF+TRST   GRI VEVCSQCHPFYTGKQKILD+GGRVAR
Sbjct  1   MKQGIHPEYAATTVVCGCGNTFETRSTAANGRINVEVCSQCHPFYTGKQKILDTGGRVAR  60

Query  61  FEKRYGKR  68
           FEKRYGKR
Sbjct  61  FEKRYGKR  68


>gi|118469064|ref|YP_889203.1| ribosomal protein L31 [Mycobacterium smegmatis str. MC2 155]
 gi|226708124|sp|A0R215.1|RL31_MYCS2 RecName: Full=50S ribosomal protein L31
 gi|118170351|gb|ABK71247.1| ribosomal protein L31 [Mycobacterium smegmatis str. MC2 155]
Length=75

 Score =  121 bits (303),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 60/75 (80%), Positives = 64/75 (86%), Gaps = 1/75 (1%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK+ IHP Y +TTV CGCG++F TRSTK  G IVVEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct  1   MKTGIHPEYVDTTVQCGCGHSFTTRSTKQSGTIVVEVCSQCHPFYTGKQKILDSGGRVAR  60

Query  61  FEKRYGKR-KVGADK  74
           FEKRYGKR K  ADK
Sbjct  61  FEKRYGKRNKAAADK  75


>gi|111018485|ref|YP_701457.1| 50S ribosomal protein L31 [Rhodococcus jostii RHA1]
 gi|226360608|ref|YP_002778386.1| 50S ribosomal protein L31 [Rhodococcus opacus B4]
 gi|118572994|sp|Q0SGN7.1|RL31_RHOSR RecName: Full=50S ribosomal protein L31
 gi|110818015|gb|ABG93299.1| 50S ribosomal protein L31 type B [Rhodococcus jostii RHA1]
 gi|226239093|dbj|BAH49441.1| 50S ribosomal protein L31 [Rhodococcus opacus B4]
Length=80

 Score =  120 bits (302),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 57/68 (84%), Positives = 59/68 (87%), Gaps = 0/68 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MKS IHP Y  TTVVCGCGNTF+T STK  GRI VEVCSQCHPFYTGKQKILD+GGRVAR
Sbjct  1   MKSGIHPNYVATTVVCGCGNTFETHSTKETGRINVEVCSQCHPFYTGKQKILDTGGRVAR  60

Query  61  FEKRYGKR  68
           FE RYGKR
Sbjct  61  FEARYGKR  68


>gi|333920930|ref|YP_004494511.1| 50S ribosomal protein L31 [Amycolicicoccus subflavus DQS3-9A1]
 gi|333483151|gb|AEF41711.1| 50S ribosomal protein L31 [Amycolicicoccus subflavus DQS3-9A1]
Length=76

 Score =  120 bits (302),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 55/69 (80%), Positives = 59/69 (86%), Gaps = 0/69 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK DIHP Y  TTVVCGCGN+F+TRS    GRI VEVCSQCHPFYTGKQKILD+GGRVAR
Sbjct  1   MKKDIHPDYVATTVVCGCGNSFETRSAAANGRISVEVCSQCHPFYTGKQKILDTGGRVAR  60

Query  61  FEKRYGKRK  69
           FE RYGKR+
Sbjct  61  FEARYGKRQ  69


>gi|296138962|ref|YP_003646205.1| 50S ribosomal protein L31 [Tsukamurella paurometabola DSM 20162]
 gi|296027096|gb|ADG77866.1| ribosomal protein L31 [Tsukamurella paurometabola DSM 20162]
Length=76

 Score =  120 bits (301),  Expect = 7e-26, Method: Compositional matrix adjust.
 Identities = 57/68 (84%), Positives = 59/68 (87%), Gaps = 0/68 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK  IHP Y  TTVVCGCGNTF+T STK  GRI VEVCSQCHPFYTGKQKILD+GGRVAR
Sbjct  1   MKQGIHPDYVATTVVCGCGNTFETHSTKADGRINVEVCSQCHPFYTGKQKILDTGGRVAR  60

Query  61  FEKRYGKR  68
           FEKRYGKR
Sbjct  61  FEKRYGKR  68


>gi|226307405|ref|YP_002767365.1| 50S ribosomal protein L31 [Rhodococcus erythropolis PR4]
 gi|229489966|ref|ZP_04383819.1| ribosomal protein L31 [Rhodococcus erythropolis SK121]
 gi|226186522|dbj|BAH34626.1| 50S ribosomal protein L31 [Rhodococcus erythropolis PR4]
 gi|229323067|gb|EEN88835.1| ribosomal protein L31 [Rhodococcus erythropolis SK121]
Length=78

 Score =  120 bits (301),  Expect = 7e-26, Method: Compositional matrix adjust.
 Identities = 56/68 (83%), Positives = 59/68 (87%), Gaps = 0/68 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK+ IHP Y  TTVVCGCGNTF+T STK  GRI VEVCSQCHPFYTGKQKILD+GGRVAR
Sbjct  1   MKAGIHPTYVATTVVCGCGNTFETHSTKESGRINVEVCSQCHPFYTGKQKILDTGGRVAR  60

Query  61  FEKRYGKR  68
           FE RYGKR
Sbjct  61  FEARYGKR  68


>gi|145222894|ref|YP_001133572.1| 50S ribosomal protein L31 [Mycobacterium gilvum PYR-GCK]
 gi|315443359|ref|YP_004076238.1| 50S ribosomal protein L31P [Mycobacterium sp. Spyr1]
 gi|226708122|sp|A4T8L2.1|RL31_MYCGI RecName: Full=50S ribosomal protein L31
 gi|145215380|gb|ABP44784.1| LSU ribosomal protein L31P [Mycobacterium gilvum PYR-GCK]
 gi|315261662|gb|ADT98403.1| LSU ribosomal protein L31P [Mycobacterium sp. Spyr1]
Length=70

 Score =  120 bits (300),  Expect = 8e-26, Method: Compositional matrix adjust.
 Identities = 57/68 (84%), Positives = 59/68 (87%), Gaps = 0/68 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MKS IHP Y ETTV+CGCG +F TRSTK  G I VEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct  1   MKSGIHPDYVETTVLCGCGASFTTRSTKKSGNITVEVCSQCHPFYTGKQKILDSGGRVAR  60

Query  61  FEKRYGKR  68
           FEKRYGKR
Sbjct  61  FEKRYGKR  68


>gi|312139165|ref|YP_004006501.1| 50S ribosomal protein l31 rpme [Rhodococcus equi 103S]
 gi|325673530|ref|ZP_08153221.1| 50S ribosomal protein L31 [Rhodococcus equi ATCC 33707]
 gi|311888504|emb|CBH47816.1| 50S ribosomal protein L31 RpmE [Rhodococcus equi 103S]
 gi|325555551|gb|EGD25222.1| 50S ribosomal protein L31 [Rhodococcus equi ATCC 33707]
Length=77

 Score =  119 bits (298),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 58/77 (76%), Positives = 62/77 (81%), Gaps = 3/77 (3%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK+ IHP Y  TTVVCGCGNTF+T ST   GRI VEVCSQCHPFYTGKQKILD+GGRVAR
Sbjct  1   MKAGIHPEYVATTVVCGCGNTFETHSTATSGRINVEVCSQCHPFYTGKQKILDTGGRVAR  60

Query  61  FEKRYGKR---KVGADK  74
           FE RYGKR   K  AD+
Sbjct  61  FEARYGKRAGKKAAADQ  77


>gi|284992529|ref|YP_003411083.1| 50S ribosomal protein L31 [Geodermatophilus obscurus DSM 43160]
 gi|284065774|gb|ADB76712.1| ribosomal protein L31 [Geodermatophilus obscurus DSM 43160]
Length=74

 Score =  117 bits (294),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 53/74 (72%), Positives = 58/74 (79%), Gaps = 0/74 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK  IHP Y  TTV CGCGNTF TRST PGG + VE CS CHPFYTGKQ+ILD+GGRVAR
Sbjct  1   MKPGIHPEYHTTTVTCGCGNTFTTRSTAPGGTLTVETCSACHPFYTGKQRILDTGGRVAR  60

Query  61  FEKRYGKRKVGADK  74
           FEKR+GKR   A +
Sbjct  61  FEKRFGKRNANAGQ  74


>gi|331695518|ref|YP_004331757.1| 50S ribosomal protein L31 [Pseudonocardia dioxanivorans CB1190]
 gi|326950207|gb|AEA23904.1| 50S ribosomal protein L31 [Pseudonocardia dioxanivorans CB1190]
Length=73

 Score =  117 bits (292),  Expect = 7e-25, Method: Compositional matrix adjust.
 Identities = 55/68 (81%), Positives = 56/68 (83%), Gaps = 0/68 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MKS IHP Y ETTV CGCGNTF TRSTK  G I  E CSQCHPFYTGKQ+ILDSGGRVAR
Sbjct  1   MKSGIHPEYVETTVTCGCGNTFTTRSTKTSGSIHAETCSQCHPFYTGKQRILDSGGRVAR  60

Query  61  FEKRYGKR  68
           FE RYGKR
Sbjct  61  FEARYGKR  68


>gi|257056965|ref|YP_003134797.1| 50S ribosomal protein L31P [Saccharomonospora viridis DSM 43017]
 gi|256586837|gb|ACU97970.1| LSU ribosomal protein L31P [Saccharomonospora viridis DSM 43017]
Length=70

 Score =  117 bits (292),  Expect = 7e-25, Method: Compositional matrix adjust.
 Identities = 55/69 (80%), Positives = 57/69 (83%), Gaps = 0/69 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MKS IHP Y  TTVVCGCGNTF TRST P   I VE+CS CHPFYTGKQKILD+GGRVAR
Sbjct  1   MKSGIHPDYHVTTVVCGCGNTFTTRSTAPSDTIHVEICSNCHPFYTGKQKILDTGGRVAR  60

Query  61  FEKRYGKRK  69
           FE RYGKRK
Sbjct  61  FEARYGKRK  69


>gi|326382081|ref|ZP_08203774.1| 50S ribosomal protein L31P [Gordonia neofelifaecis NRRL B-59395]
 gi|326199507|gb|EGD56688.1| 50S ribosomal protein L31P [Gordonia neofelifaecis NRRL B-59395]
Length=70

 Score =  115 bits (289),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 55/68 (81%), Positives = 56/68 (83%), Gaps = 0/68 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK  IHP YE TTV CGCGN F TRST  GG I VEVCS CHPFYTGKQKILD+GGRVAR
Sbjct  1   MKQGIHPDYEVTTVNCGCGNEFTTRSTAKGGHITVEVCSNCHPFYTGKQKILDTGGRVAR  60

Query  61  FEKRYGKR  68
           FEKRYGKR
Sbjct  61  FEKRYGKR  68


>gi|312194809|ref|YP_004014870.1| ribosomal protein L31 [Frankia sp. EuI1c]
 gi|311226145|gb|ADP79000.1| ribosomal protein L31 [Frankia sp. EuI1c]
Length=78

 Score =  115 bits (288),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 52/71 (74%), Positives = 61/71 (86%), Gaps = 0/71 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           M++DIHP YE+TTVVC CG+TF T+STK GG I  EVCSQCHPFYTGKQKILD GGRV +
Sbjct  1   MRADIHPTYEDTTVVCSCGSTFTTKSTKAGGTIHAEVCSQCHPFYTGKQKILDVGGRVEK  60

Query  61  FEKRYGKRKVG  71
           FE+R+GKR+ G
Sbjct  61  FERRFGKRQPG  71


>gi|317506165|ref|ZP_07963986.1| ribosomal protein L31 [Segniliparus rugosus ATCC BAA-974]
 gi|316255510|gb|EFV14759.1| ribosomal protein L31 [Segniliparus rugosus ATCC BAA-974]
Length=70

 Score =  115 bits (287),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 55/69 (80%), Positives = 58/69 (85%), Gaps = 0/69 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK+ IHP Y  TTV CGCG+TFQTRST+  G I VEVCS CHPFYTGKQKILDSGGRVAR
Sbjct  1   MKAGIHPDYVLTTVTCGCGSTFQTRSTETKGAITVEVCSACHPFYTGKQKILDSGGRVAR  60

Query  61  FEKRYGKRK  69
           FE RYGKRK
Sbjct  61  FEARYGKRK  69


>gi|302529801|ref|ZP_07282143.1| ribosomal protein L31 [Streptomyces sp. AA4]
 gi|302438696|gb|EFL10512.1| ribosomal protein L31 [Streptomyces sp. AA4]
Length=75

 Score =  114 bits (286),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 53/73 (73%), Positives = 59/73 (81%), Gaps = 0/73 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MKS IHP Y  TTV C CGN+F TRSTK  G+I VE+CS CHPFYTGKQKI+D+GGRVAR
Sbjct  1   MKSGIHPEYVTTTVTCNCGNSFVTRSTKESGQIHVEICSNCHPFYTGKQKIMDTGGRVAR  60

Query  61  FEKRYGKRKVGAD  73
           FEKRYGKR+   D
Sbjct  61  FEKRYGKRQQKTD  73


>gi|296393115|ref|YP_003657999.1| 50S ribosomal protein L31 [Segniliparus rotundus DSM 44985]
 gi|296180262|gb|ADG97168.1| ribosomal protein L31 [Segniliparus rotundus DSM 44985]
Length=70

 Score =  113 bits (283),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 53/69 (77%), Positives = 59/69 (86%), Gaps = 0/69 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           M++ IHP Y  TTV+CGCGNTFQTRST+  G I VEVCS CHPFYTGKQK+LDSGGRVAR
Sbjct  1   MQAGIHPKYVLTTVMCGCGNTFQTRSTETKGAISVEVCSGCHPFYTGKQKMLDSGGRVAR  60

Query  61  FEKRYGKRK  69
           FE RYGKR+
Sbjct  61  FESRYGKRR  69


>gi|284032946|ref|YP_003382877.1| 50S ribosomal protein L31 [Kribbella flavida DSM 17836]
 gi|283812239|gb|ADB34078.1| ribosomal protein L31 [Kribbella flavida DSM 17836]
Length=68

 Score =  113 bits (283),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 52/68 (77%), Positives = 56/68 (83%), Gaps = 0/68 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MKSDIHP Y +TTV C CG TFQTRST   G I  +VCSQCHPFYTGKQKILD+GGRVAR
Sbjct  1   MKSDIHPTYVDTTVTCTCGATFQTRSTAESGSIHADVCSQCHPFYTGKQKILDTGGRVAR  60

Query  61  FEKRYGKR  68
           FEKRY K+
Sbjct  61  FEKRYAKK  68


>gi|256825644|ref|YP_003149604.1| 50S ribosomal protein L31P [Kytococcus sedentarius DSM 20547]
 gi|256689037|gb|ACV06839.1| LSU ribosomal protein L31P [Kytococcus sedentarius DSM 20547]
Length=71

 Score =  113 bits (283),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 50/68 (74%), Positives = 59/68 (87%), Gaps = 0/68 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           M+ DIHPAY+ T VVC CG+TF TRST  GGR+ V+VCSQCHPFYTGKQKILD+GGRVAR
Sbjct  1   MRKDIHPAYDTTEVVCTCGSTFTTRSTADGGRMSVDVCSQCHPFYTGKQKILDTGGRVAR  60

Query  61  FEKRYGKR  68
           F++RYG +
Sbjct  61  FQQRYGNK  68


>gi|117927848|ref|YP_872399.1| 50S ribosomal protein L31P [Acidothermus cellulolyticus 11B]
 gi|226705337|sp|A0LSK3.1|RL31_ACIC1 RecName: Full=50S ribosomal protein L31
 gi|117648311|gb|ABK52413.1| LSU ribosomal protein L31P [Acidothermus cellulolyticus 11B]
Length=86

 Score =  112 bits (281),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 55/80 (69%), Positives = 59/80 (74%), Gaps = 0/80 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK DIHP Y ETTV+C CGNTF TRST   G I  EVCS CHPFYTGKQKILD GGRV +
Sbjct  1   MKPDIHPEYRETTVICSCGNTFTTRSTAKSGVIHAEVCSNCHPFYTGKQKILDVGGRVQK  60

Query  61  FEKRYGKRKVGADKAVSTGK  80
           FEKR+G+    A  A STGK
Sbjct  61  FEKRFGQLTGAARVARSTGK  80


>gi|256390406|ref|YP_003111970.1| 50S ribosomal protein L31 [Catenulispora acidiphila DSM 44928]
 gi|256356632|gb|ACU70129.1| ribosomal protein L31 [Catenulispora acidiphila DSM 44928]
Length=72

 Score =  112 bits (280),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 50/68 (74%), Positives = 57/68 (84%), Gaps = 0/68 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK DIHP+Y+ TTV CGCG +F+T ST P G I  EVCSQCHPFYTGKQKILD+GGRVAR
Sbjct  1   MKPDIHPSYQVTTVTCGCGASFETHSTAPNGVIHAEVCSQCHPFYTGKQKILDTGGRVAR  60

Query  61  FEKRYGKR  68
           FE R+GK+
Sbjct  61  FEARFGKK  68


>gi|134102729|ref|YP_001108390.1| 50S ribosomal protein L31 [Saccharopolyspora erythraea NRRL 2338]
 gi|226708170|sp|A4FN40.1|RL31_SACEN RecName: Full=50S ribosomal protein L31
 gi|133915352|emb|CAM05465.1| 50S ribosomal protein L31 [Saccharopolyspora erythraea NRRL 2338]
Length=70

 Score =  112 bits (280),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 51/69 (74%), Positives = 57/69 (83%), Gaps = 0/69 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MKS IHP Y  T V CGCGN+F TRST+  G+I VE+CS CHPFYTGKQKILD+GGRVAR
Sbjct  1   MKSGIHPEYVTTQVNCGCGNSFTTRSTRTSGQITVEICSNCHPFYTGKQKILDTGGRVAR  60

Query  61  FEKRYGKRK  69
           FE RYG+RK
Sbjct  61  FEARYGRRK  69


>gi|158312863|ref|YP_001505371.1| 50S ribosomal protein L31 [Frankia sp. EAN1pec]
 gi|226705275|sp|A8L3V0.1|RL31_FRASN RecName: Full=50S ribosomal protein L31
 gi|158108268|gb|ABW10465.1| ribosomal protein L31 [Frankia sp. EAN1pec]
Length=78

 Score =  112 bits (279),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 51/71 (72%), Positives = 58/71 (82%), Gaps = 0/71 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK+DIHP Y ETTV C CG+TF TRSTK  G I  EVCSQCHPFYTGKQKILD GGRV +
Sbjct  1   MKADIHPQYHETTVTCTCGSTFTTRSTKENGAISAEVCSQCHPFYTGKQKILDVGGRVEK  60

Query  61  FEKRYGKRKVG  71
           FE+R+G+R+ G
Sbjct  61  FERRFGRRQPG  71


>gi|336179680|ref|YP_004585055.1| 50S ribosomal protein L31 [Frankia symbiont of Datisca glomerata]
 gi|334860660|gb|AEH11134.1| 50S ribosomal protein L31 [Frankia symbiont of Datisca glomerata]
Length=79

 Score =  112 bits (279),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 54/80 (68%), Positives = 63/80 (79%), Gaps = 1/80 (1%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           M++DIHP Y ETTVVC CG+TF TRSTK    I  EVCSQCHPFYTGKQKILD GGRV +
Sbjct  1   MRADIHPTYHETTVVCTCGSTFTTRSTKSDAVIHAEVCSQCHPFYTGKQKILDVGGRVEK  60

Query  61  FEKRYGKRKVGADKAVSTGK  80
           FE+R+G+R+ G DK  +T K
Sbjct  61  FERRFGRRRPG-DKPGTTAK  79


>gi|313827398|gb|EFS65112.1| ribosomal protein L31 [Propionibacterium acnes HL063PA2]
Length=69

 Score =  111 bits (278),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 50/69 (73%), Positives = 57/69 (83%), Gaps = 0/69 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK +IHP Y ETTVVC CGNTF TRST   G +  +VCS+CHPFYTGKQKILD+GGRVAR
Sbjct  1   MKQEIHPDYRETTVVCTCGNTFTTRSTSQSGTLNADVCSKCHPFYTGKQKILDAGGRVAR  60

Query  61  FEKRYGKRK  69
           FE+RYGK+ 
Sbjct  61  FERRYGKKN  69


>gi|86742402|ref|YP_482802.1| 50S ribosomal protein L31 [Frankia sp. CcI3]
 gi|124056500|sp|Q2J6L9.1|RL31_FRASC RecName: Full=50S ribosomal protein L31
 gi|86569264|gb|ABD13073.1| LSU ribosomal protein L31P [Frankia sp. CcI3]
Length=78

 Score =  111 bits (277),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 50/71 (71%), Positives = 57/71 (81%), Gaps = 0/71 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK D+HP Y ETTV C CGNTF TRSTK  G +  EVCSQCHPFYTGKQKILD GGRV +
Sbjct  1   MKPDVHPTYHETTVTCTCGNTFTTRSTKENGVVNAEVCSQCHPFYTGKQKILDVGGRVEK  60

Query  61  FEKRYGKRKVG  71
           FE+R+G+R+ G
Sbjct  61  FERRFGRRRPG  71


>gi|325002819|ref|ZP_08123931.1| 50S ribosomal protein L31 [Pseudonocardia sp. P1]
Length=74

 Score =  111 bits (277),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 54/68 (80%), Gaps = 0/68 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           M+  +HP Y +T V CGCGN F TRSTK  G I VEVCS CHPFYTGKQKILDSGGRVAR
Sbjct  1   MREGVHPQYVDTQVTCGCGNQFTTRSTKANGAITVEVCSACHPFYTGKQKILDSGGRVAR  60

Query  61  FEKRYGKR  68
           FE RYGKR
Sbjct  61  FEARYGKR  68


>gi|256380144|ref|YP_003103804.1| 50S ribosomal protein L31 [Actinosynnema mirum DSM 43827]
 gi|255924447|gb|ACU39958.1| ribosomal protein L31 [Actinosynnema mirum DSM 43827]
Length=70

 Score =  110 bits (276),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 52/68 (77%), Positives = 55/68 (81%), Gaps = 0/68 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK+ IHP Y +T V CGCGNTF T STK  G I VEVCS CHPFYTGKQKILD+GGRVAR
Sbjct  1   MKTGIHPEYVKTEVTCGCGNTFTTHSTKTSGAIHVEVCSNCHPFYTGKQKILDTGGRVAR  60

Query  61  FEKRYGKR  68
           FE RYGKR
Sbjct  61  FEARYGKR  68


>gi|258652311|ref|YP_003201467.1| 50S ribosomal protein L31 [Nakamurella multipartita DSM 44233]
 gi|258555536|gb|ACV78478.1| ribosomal protein L31 [Nakamurella multipartita DSM 44233]
Length=70

 Score =  110 bits (275),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 52/68 (77%), Positives = 56/68 (83%), Gaps = 0/68 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK+ IHP Y  T V CGCGNTF TRST+  G+I VEVCS CHPFYTGKQKILD+GGRVAR
Sbjct  1   MKTGIHPTYVTTEVHCGCGNTFTTRSTETSGQIHVEVCSNCHPFYTGKQKILDTGGRVAR  60

Query  61  FEKRYGKR  68
           FE RYGKR
Sbjct  61  FEARYGKR  68


>gi|257069076|ref|YP_003155331.1| 50S ribosomal protein L31P [Brachybacterium faecium DSM 4810]
 gi|256559894|gb|ACU85741.1| LSU ribosomal protein L31P [Brachybacterium faecium DSM 4810]
Length=71

 Score =  110 bits (274),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 50/68 (74%), Positives = 56/68 (83%), Gaps = 0/68 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK++IHPAY ET V C CGN+F TRSTK  G I  EVCS CHPFYTGKQKILD+GGRVAR
Sbjct  1   MKAEIHPAYVETQVTCTCGNSFTTRSTKSDGVISTEVCSACHPFYTGKQKILDTGGRVAR  60

Query  61  FEKRYGKR  68
           F+ RYGK+
Sbjct  61  FQARYGKK  68


>gi|50842732|ref|YP_055959.1| 50S ribosomal protein L31 [Propionibacterium acnes KPA171202]
 gi|282853789|ref|ZP_06263126.1| ribosomal protein L31 [Propionibacterium acnes J139]
 gi|289425204|ref|ZP_06426981.1| ribosomal protein L31 [Propionibacterium acnes SK187]
 79 more sequence titles
 Length=69

 Score =  110 bits (274),  Expect = 9e-23, Method: Compositional matrix adjust.
 Identities = 50/69 (73%), Positives = 56/69 (82%), Gaps = 0/69 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK  IHP Y ETTVVC CGNTF TRST   G +  +VCS+CHPFYTGKQKILD+GGRVAR
Sbjct  1   MKQGIHPDYRETTVVCTCGNTFTTRSTSQSGTLNADVCSKCHPFYTGKQKILDAGGRVAR  60

Query  61  FEKRYGKRK  69
           FE+RYGK+ 
Sbjct  61  FERRYGKKN  69


>gi|111225295|ref|YP_716089.1| 50S ribosomal protein L31 [Frankia alni ACN14a]
 gi|123142638|sp|Q0RD99.1|RL31_FRAAA RecName: Full=50S ribosomal protein L31
 gi|111152827|emb|CAJ64572.1| 50S ribosomal subunit protein L31 [Frankia alni ACN14a]
Length=78

 Score =  110 bits (274),  Expect = 9e-23, Method: Compositional matrix adjust.
 Identities = 50/71 (71%), Positives = 58/71 (82%), Gaps = 0/71 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK+DIHP Y ETTV C CG+TF TRSTK  G +  EVCSQCHPFYTGKQKILD GGRV +
Sbjct  1   MKADIHPTYHETTVNCTCGSTFTTRSTKENGVVNAEVCSQCHPFYTGKQKILDVGGRVEK  60

Query  61  FEKRYGKRKVG  71
           FE+R+G+R+ G
Sbjct  61  FERRFGRRRPG  71


>gi|289178288|gb|ADC85534.1| LSU ribosomal protein L31P [Bifidobacterium animalis subsp. lactis 
BB-12]
 gi|340364678|gb|AEK29969.1| LSU ribosomal protein L31P [Bifidobacterium animalis subsp. lactis 
CNCM I-2494]
Length=117

 Score =  110 bits (274),  Expect = 9e-23, Method: Compositional matrix adjust.
 Identities = 48/69 (70%), Positives = 56/69 (82%), Gaps = 0/69 (0%)

Query  1    MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
            M+  IHP Y + TV C CGNTF+TRST  G  + V+VCS+CHPFYTGKQKILD+GGRVAR
Sbjct  49   MQQGIHPDYHKVTVTCSCGNTFETRSTAKGDHMTVDVCSKCHPFYTGKQKILDTGGRVAR  108

Query  61   FEKRYGKRK  69
            FEKRYGK+ 
Sbjct  109  FEKRYGKKN  117


>gi|84494540|ref|ZP_00993659.1| 50S ribosomal protein L31 [Janibacter sp. HTCC2649]
 gi|84384033|gb|EAP99913.1| 50S ribosomal protein L31 [Janibacter sp. HTCC2649]
Length=71

 Score =  110 bits (274),  Expect = 9e-23, Method: Compositional matrix adjust.
 Identities = 50/68 (74%), Positives = 54/68 (80%), Gaps = 0/68 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK DIHP Y ETTV C CG +F TRST   G I  EVCSQCHPFYTGKQKILD+GGRVAR
Sbjct  1   MKKDIHPNYAETTVTCTCGASFTTRSTAESGAIHAEVCSQCHPFYTGKQKILDTGGRVAR  60

Query  61  FEKRYGKR  68
           F+ RYGK+
Sbjct  61  FQARYGKK  68


>gi|288922981|ref|ZP_06417138.1| ribosomal protein L31 [Frankia sp. EUN1f]
 gi|288345657|gb|EFC80029.1| ribosomal protein L31 [Frankia sp. EUN1f]
Length=78

 Score =  109 bits (272),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 51/75 (68%), Positives = 59/75 (79%), Gaps = 1/75 (1%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK+DIHP Y ET V C CG+TF TRSTK    I  EVCSQCHPFYTGKQKI+D GGRV +
Sbjct  1   MKADIHPTYHETVVTCTCGSTFTTRSTKDNAAISAEVCSQCHPFYTGKQKIMDVGGRVEK  60

Query  61  FEKRYGKRKVGADKA  75
           FE+R+G+R+ G DKA
Sbjct  61  FERRFGRRRPG-DKA  74


>gi|326771966|ref|ZP_08231251.1| ribosomal protein L31 [Actinomyces viscosus C505]
 gi|326638099|gb|EGE39000.1| ribosomal protein L31 [Actinomyces viscosus C505]
Length=100

 Score =  108 bits (271),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 54/68 (80%), Gaps = 0/68 (0%)

Query  1   MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR  60
           MK  IHP Y  TTV C CGNTF+TRST   G I V+VCS CHPFYTGKQKILD+GGRVAR
Sbjct  31  MKQGIHPDYVATTVTCTCGNTFETRSTVTSGEIRVDVCSACHPFYTGKQKILDTGGRVAR  90

Query  61  FEKRYGKR  68
           FE RYGKR
Sbjct  91  FEARYGKR  98



Lambda     K      H
   0.318    0.135    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 128850890930


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40