BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1298
Length=80
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608438|ref|NP_215814.1| 50S ribosomal protein L31 [Mycobact... 165 2e-39
gi|294994855|ref|ZP_06800546.1| 50S ribosomal protein L31 [Mycob... 153 9e-36
gi|240169516|ref|ZP_04748175.1| 50S ribosomal protein L31 [Mycob... 152 2e-35
gi|15827564|ref|NP_301827.1| 50S ribosomal protein L31 [Mycobact... 149 2e-34
gi|118619170|ref|YP_907502.1| 50S ribosomal protein L31 [Mycobac... 147 5e-34
gi|41408561|ref|NP_961397.1| 50S ribosomal protein L31 [Mycobact... 147 6e-34
gi|254821297|ref|ZP_05226298.1| 50S ribosomal protein L31 [Mycob... 139 1e-31
gi|342858041|ref|ZP_08714697.1| 50S ribosomal protein L31 [Mycob... 139 2e-31
gi|296170239|ref|ZP_06851832.1| 50S ribosomal protein L31 [Mycob... 135 2e-30
gi|169628532|ref|YP_001702181.1| 50S ribosomal protein L31 [Myco... 131 3e-29
gi|108800852|ref|YP_641049.1| 50S ribosomal protein L31 [Mycobac... 128 3e-28
gi|120405294|ref|YP_955123.1| 50S ribosomal protein L31 [Mycobac... 127 6e-28
gi|333989937|ref|YP_004522551.1| 50S ribosomal protein L31 RpmE ... 125 1e-27
gi|54023020|ref|YP_117262.1| 50S ribosomal protein L31 [Nocardia... 125 3e-27
gi|262201847|ref|YP_003273055.1| 50S ribosomal protein L31 [Gord... 124 6e-27
gi|343928058|ref|ZP_08767523.1| 50S ribosomal protein L31 [Gordo... 122 2e-26
gi|118469064|ref|YP_889203.1| ribosomal protein L31 [Mycobacteri... 121 4e-26
gi|111018485|ref|YP_701457.1| 50S ribosomal protein L31 [Rhodoco... 120 5e-26
gi|333920930|ref|YP_004494511.1| 50S ribosomal protein L31 [Amyc... 120 5e-26
gi|296138962|ref|YP_003646205.1| 50S ribosomal protein L31 [Tsuk... 120 7e-26
gi|226307405|ref|YP_002767365.1| 50S ribosomal protein L31 [Rhod... 120 7e-26
gi|145222894|ref|YP_001133572.1| 50S ribosomal protein L31 [Myco... 120 8e-26
gi|312139165|ref|YP_004006501.1| 50S ribosomal protein l31 rpme ... 119 1e-25
gi|284992529|ref|YP_003411083.1| 50S ribosomal protein L31 [Geod... 117 4e-25
gi|331695518|ref|YP_004331757.1| 50S ribosomal protein L31 [Pseu... 117 7e-25
gi|257056965|ref|YP_003134797.1| 50S ribosomal protein L31P [Sac... 117 7e-25
gi|326382081|ref|ZP_08203774.1| 50S ribosomal protein L31P [Gord... 115 2e-24
gi|312194809|ref|YP_004014870.1| ribosomal protein L31 [Frankia ... 115 2e-24
gi|317506165|ref|ZP_07963986.1| ribosomal protein L31 [Segnilipa... 115 3e-24
gi|302529801|ref|ZP_07282143.1| ribosomal protein L31 [Streptomy... 114 3e-24
gi|296393115|ref|YP_003657999.1| 50S ribosomal protein L31 [Segn... 113 8e-24
gi|284032946|ref|YP_003382877.1| 50S ribosomal protein L31 [Krib... 113 8e-24
gi|256825644|ref|YP_003149604.1| 50S ribosomal protein L31P [Kyt... 113 8e-24
gi|117927848|ref|YP_872399.1| 50S ribosomal protein L31P [Acidot... 112 2e-23
gi|256390406|ref|YP_003111970.1| 50S ribosomal protein L31 [Cate... 112 2e-23
gi|134102729|ref|YP_001108390.1| 50S ribosomal protein L31 [Sacc... 112 2e-23
gi|158312863|ref|YP_001505371.1| 50S ribosomal protein L31 [Fran... 112 2e-23
gi|336179680|ref|YP_004585055.1| 50S ribosomal protein L31 [Fran... 112 3e-23
gi|313827398|gb|EFS65112.1| ribosomal protein L31 [Propionibacte... 111 3e-23
gi|86742402|ref|YP_482802.1| 50S ribosomal protein L31 [Frankia ... 111 4e-23
gi|325002819|ref|ZP_08123931.1| 50S ribosomal protein L31 [Pseud... 111 4e-23
gi|256380144|ref|YP_003103804.1| 50S ribosomal protein L31 [Acti... 110 6e-23
gi|258652311|ref|YP_003201467.1| 50S ribosomal protein L31 [Naka... 110 7e-23
gi|257069076|ref|YP_003155331.1| 50S ribosomal protein L31P [Bra... 110 8e-23
gi|50842732|ref|YP_055959.1| 50S ribosomal protein L31 [Propioni... 110 9e-23
gi|111225295|ref|YP_716089.1| 50S ribosomal protein L31 [Frankia... 110 9e-23
gi|289178288|gb|ADC85534.1| LSU ribosomal protein L31P [Bifidoba... 110 9e-23
gi|84494540|ref|ZP_00993659.1| 50S ribosomal protein L31 [Janiba... 110 9e-23
gi|288922981|ref|ZP_06417138.1| ribosomal protein L31 [Frankia s... 109 1e-22
gi|326771966|ref|ZP_08231251.1| ribosomal protein L31 [Actinomyc... 108 2e-22
>gi|15608438|ref|NP_215814.1| 50S ribosomal protein L31 [Mycobacterium tuberculosis H37Rv]
gi|15840748|ref|NP_335785.1| 50S ribosomal protein L31 [Mycobacterium tuberculosis CDC1551]
gi|31792491|ref|NP_854984.1| 50S ribosomal protein L31 [Mycobacterium bovis AF2122/97]
82 more sequence titles
Length=80
Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/80 (100%), Positives = 80/80 (100%), Gaps = 0/80 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
Query 61 FEKRYGKRKVGADKAVSTGK 80
FEKRYGKRKVGADKAVSTGK
Sbjct 61 FEKRYGKRKVGADKAVSTGK 80
>gi|294994855|ref|ZP_06800546.1| 50S ribosomal protein L31 [Mycobacterium tuberculosis 210]
Length=73
Score = 153 bits (386), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 73/73 (100%), Positives = 73/73 (100%), Gaps = 0/73 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
Query 61 FEKRYGKRKVGAD 73
FEKRYGKRKVGAD
Sbjct 61 FEKRYGKRKVGAD 73
>gi|240169516|ref|ZP_04748175.1| 50S ribosomal protein L31 [Mycobacterium kansasii ATCC 12478]
Length=81
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/80 (92%), Positives = 75/80 (94%), Gaps = 0/80 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MKSDIHPAYEETTVVCGCGNTFQTRSTK GGRIVVEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKLGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
Query 61 FEKRYGKRKVGADKAVSTGK 80
FE+RYGKRKVGADK + K
Sbjct 61 FERRYGKRKVGADKDEAAAK 80
>gi|15827564|ref|NP_301827.1| 50S ribosomal protein L31 [Mycobacterium leprae TN]
gi|221230041|ref|YP_002503457.1| 50S ribosomal protein L31 [Mycobacterium leprae Br4923]
gi|1173026|sp|P45834.1|RL31_MYCLE RecName: Full=50S ribosomal protein L31
gi|254801768|sp|B8ZR30.1|RL31_MYCLB RecName: Full=50S ribosomal protein L31
gi|699331|gb|AAA63092.1| rpmE [Mycobacterium leprae]
gi|13093114|emb|CAC31514.1| 50S ribosomal protein L31 [Mycobacterium leprae]
gi|219933148|emb|CAR71228.1| 50S ribosomal protein L31 [Mycobacterium leprae Br4923]
Length=84
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/77 (90%), Positives = 73/77 (95%), Gaps = 0/77 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK++IHPAY ETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct 1 MKANIHPAYAETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
Query 61 FEKRYGKRKVGADKAVS 77
FEKRYGKRKVG D+ +
Sbjct 61 FEKRYGKRKVGVDQVAA 77
>gi|118619170|ref|YP_907502.1| 50S ribosomal protein L31 [Mycobacterium ulcerans Agy99]
gi|183984070|ref|YP_001852361.1| 50S ribosomal protein L31 RpmE [Mycobacterium marinum M]
gi|226708123|sp|B2HQL4.1|RL31_MYCMM RecName: Full=50S ribosomal protein L31
gi|226708128|sp|A0PUL2.1|RL31_MYCUA RecName: Full=50S ribosomal protein L31
gi|118571280|gb|ABL06031.1| 50S ribosomal protein L31 RpmE [Mycobacterium ulcerans Agy99]
gi|183177396|gb|ACC42506.1| 50S ribosomal protein L31 RpmE [Mycobacterium marinum M]
Length=81
Score = 147 bits (371), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/74 (94%), Positives = 70/74 (95%), Gaps = 0/74 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MKSDIHP YEETTVVCGCGNTFQTRSTK GGRIV EVCSQCHPFYTGKQKILDSGGRVAR
Sbjct 1 MKSDIHPTYEETTVVCGCGNTFQTRSTKQGGRIVAEVCSQCHPFYTGKQKILDSGGRVAR 60
Query 61 FEKRYGKRKVGADK 74
FE+RYGKRK GADK
Sbjct 61 FERRYGKRKAGADK 74
>gi|41408561|ref|NP_961397.1| 50S ribosomal protein L31 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118465454|ref|YP_880754.1| 50S ribosomal protein L31 [Mycobacterium avium 104]
gi|254774337|ref|ZP_05215853.1| 50S ribosomal protein L31 [Mycobacterium avium subsp. avium ATCC
25291]
gi|73621807|sp|Q73X47.1|RL31_MYCPA RecName: Full=50S ribosomal protein L31
gi|226708118|sp|A0QCW6.1|RL31_MYCA1 RecName: Full=50S ribosomal protein L31
gi|41396919|gb|AAS04780.1| RpmE [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118166741|gb|ABK67638.1| ribosomal protein L31 [Mycobacterium avium 104]
gi|336460911|gb|EGO39794.1| ribosomal protein L31 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=80
Score = 147 bits (371), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 70/80 (88%), Positives = 73/80 (92%), Gaps = 0/80 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK+DIHP Y ETTV+CGCGNTFQTRSTK GGRIVVEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct 1 MKADIHPTYAETTVLCGCGNTFQTRSTKDGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
Query 61 FEKRYGKRKVGADKAVSTGK 80
FEKRYGKRK GA+KA S K
Sbjct 61 FEKRYGKRKAGAEKAESADK 80
>gi|254821297|ref|ZP_05226298.1| 50S ribosomal protein L31 [Mycobacterium intracellulare ATCC
13950]
Length=76
Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/72 (91%), Positives = 67/72 (94%), Gaps = 0/72 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK+DIHPAY ETTV+CGCGNTFQTRSTK GG I VEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct 1 MKADIHPAYAETTVLCGCGNTFQTRSTKEGGHITVEVCSQCHPFYTGKQKILDSGGRVAR 60
Query 61 FEKRYGKRKVGA 72
FEKRYGKRK GA
Sbjct 61 FEKRYGKRKAGA 72
>gi|342858041|ref|ZP_08714697.1| 50S ribosomal protein L31 [Mycobacterium colombiense CECT 3035]
gi|342135374|gb|EGT88540.1| 50S ribosomal protein L31 [Mycobacterium colombiense CECT 3035]
Length=76
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/72 (91%), Positives = 67/72 (94%), Gaps = 0/72 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK+DIHPAY ETTV+CGCGNTFQTRSTK GG IVVEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct 1 MKADIHPAYGETTVLCGCGNTFQTRSTKDGGHIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
Query 61 FEKRYGKRKVGA 72
FEKRYGKR GA
Sbjct 61 FEKRYGKRNAGA 72
>gi|296170239|ref|ZP_06851832.1| 50S ribosomal protein L31 [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295895115|gb|EFG74833.1| 50S ribosomal protein L31 [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=78
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/72 (91%), Positives = 66/72 (92%), Gaps = 0/72 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK+DIHPAY ETTV CGCGNTF TRSTKPGG IVVEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct 1 MKTDIHPAYGETTVHCGCGNTFTTRSTKPGGNIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
Query 61 FEKRYGKRKVGA 72
FEKRYGKRK A
Sbjct 61 FEKRYGKRKGAA 72
>gi|169628532|ref|YP_001702181.1| 50S ribosomal protein L31 [Mycobacterium abscessus ATCC 19977]
gi|226708120|sp|B1MLV0.1|RL31_MYCA9 RecName: Full=50S ribosomal protein L31
gi|169240499|emb|CAM61527.1| 50S ribosomal protein L31 [Mycobacterium abscessus]
Length=74
Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/74 (86%), Positives = 63/74 (86%), Gaps = 0/74 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MKS IHP Y ET VVCGCGNTF TRSTK G IVVEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct 1 MKSGIHPNYVETNVVCGCGNTFTTRSTKESGHIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
Query 61 FEKRYGKRKVGADK 74
FE RYGKRK ADK
Sbjct 61 FEARYGKRKAAADK 74
>gi|108800852|ref|YP_641049.1| 50S ribosomal protein L31 [Mycobacterium sp. MCS]
gi|119869992|ref|YP_939944.1| 50S ribosomal protein L31 [Mycobacterium sp. KMS]
gi|126436450|ref|YP_001072141.1| 50S ribosomal protein L31 [Mycobacterium sp. JLS]
6 more sequence titles
Length=81
Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/78 (83%), Positives = 67/78 (86%), Gaps = 2/78 (2%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK+ IHP Y ETTV CGCGNTF TRSTK G IVVEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct 1 MKTGIHPDYVETTVQCGCGNTFTTRSTKKTGNIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
Query 61 FEKRYGKRKVGADKAVST 78
FEKRYGKR GA+KA +T
Sbjct 61 FEKRYGKR--GANKAANT 76
>gi|120405294|ref|YP_955123.1| 50S ribosomal protein L31 [Mycobacterium vanbaalenii PYR-1]
gi|226708129|sp|A1TD67.1|RL31_MYCVP RecName: Full=50S ribosomal protein L31
gi|119958112|gb|ABM15117.1| LSU ribosomal protein L31P [Mycobacterium vanbaalenii PYR-1]
Length=74
Score = 127 bits (319), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/74 (83%), Positives = 64/74 (87%), Gaps = 0/74 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MKS IHP Y ETTV+CGCG +F TRSTK G+I VEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct 1 MKSGIHPDYVETTVLCGCGASFTTRSTKQSGQITVEVCSQCHPFYTGKQKILDSGGRVAR 60
Query 61 FEKRYGKRKVGADK 74
FEKRYGKRK ADK
Sbjct 61 FEKRYGKRKTTADK 74
>gi|333989937|ref|YP_004522551.1| 50S ribosomal protein L31 RpmE [Mycobacterium sp. JDM601]
gi|333485905|gb|AEF35297.1| 50S ribosomal protein L31 RpmE [Mycobacterium sp. JDM601]
Length=80
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/69 (87%), Positives = 62/69 (90%), Gaps = 0/69 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK+ IHP Y ETTVVCGCGN+F TRSTK G IVVEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct 1 MKTGIHPTYGETTVVCGCGNSFTTRSTKESGHIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
Query 61 FEKRYGKRK 69
FEKRYGKRK
Sbjct 61 FEKRYGKRK 69
>gi|54023020|ref|YP_117262.1| 50S ribosomal protein L31 [Nocardia farcinica IFM 10152]
gi|73621810|sp|Q5Z0Z3.1|RL31_NOCFA RecName: Full=50S ribosomal protein L31
gi|54014528|dbj|BAD55898.1| putative ribosomal protein L31 [Nocardia farcinica IFM 10152]
Length=76
Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/68 (86%), Positives = 61/68 (90%), Gaps = 0/68 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK+ IHPAY +TTVVCGCGNTFQTRSTK G I VEVCSQCHPFYTGKQKILD+GGRVAR
Sbjct 1 MKAGIHPAYVDTTVVCGCGNTFQTRSTKESGHITVEVCSQCHPFYTGKQKILDTGGRVAR 60
Query 61 FEKRYGKR 68
FE RYGKR
Sbjct 61 FEARYGKR 68
>gi|262201847|ref|YP_003273055.1| 50S ribosomal protein L31 [Gordonia bronchialis DSM 43247]
gi|262085194|gb|ACY21162.1| ribosomal protein L31 [Gordonia bronchialis DSM 43247]
Length=75
Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/73 (80%), Positives = 61/73 (84%), Gaps = 0/73 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK IHP Y TTVVCGCGNTF+TRST GRI VEVCSQCHPFYTGKQKILD+GGRVA+
Sbjct 1 MKQGIHPEYATTTVVCGCGNTFETRSTAANGRINVEVCSQCHPFYTGKQKILDTGGRVAK 60
Query 61 FEKRYGKRKVGAD 73
FEKRYGKR AD
Sbjct 61 FEKRYGKRTKNAD 73
>gi|343928058|ref|ZP_08767523.1| 50S ribosomal protein L31 [Gordonia alkanivorans NBRC 16433]
gi|343762066|dbj|GAA14449.1| 50S ribosomal protein L31 [Gordonia alkanivorans NBRC 16433]
Length=70
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/68 (84%), Positives = 59/68 (87%), Gaps = 0/68 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK IHP Y TTVVCGCGNTF+TRST GRI VEVCSQCHPFYTGKQKILD+GGRVAR
Sbjct 1 MKQGIHPEYAATTVVCGCGNTFETRSTAANGRINVEVCSQCHPFYTGKQKILDTGGRVAR 60
Query 61 FEKRYGKR 68
FEKRYGKR
Sbjct 61 FEKRYGKR 68
>gi|118469064|ref|YP_889203.1| ribosomal protein L31 [Mycobacterium smegmatis str. MC2 155]
gi|226708124|sp|A0R215.1|RL31_MYCS2 RecName: Full=50S ribosomal protein L31
gi|118170351|gb|ABK71247.1| ribosomal protein L31 [Mycobacterium smegmatis str. MC2 155]
Length=75
Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/75 (80%), Positives = 64/75 (86%), Gaps = 1/75 (1%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK+ IHP Y +TTV CGCG++F TRSTK G IVVEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct 1 MKTGIHPEYVDTTVQCGCGHSFTTRSTKQSGTIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
Query 61 FEKRYGKR-KVGADK 74
FEKRYGKR K ADK
Sbjct 61 FEKRYGKRNKAAADK 75
>gi|111018485|ref|YP_701457.1| 50S ribosomal protein L31 [Rhodococcus jostii RHA1]
gi|226360608|ref|YP_002778386.1| 50S ribosomal protein L31 [Rhodococcus opacus B4]
gi|118572994|sp|Q0SGN7.1|RL31_RHOSR RecName: Full=50S ribosomal protein L31
gi|110818015|gb|ABG93299.1| 50S ribosomal protein L31 type B [Rhodococcus jostii RHA1]
gi|226239093|dbj|BAH49441.1| 50S ribosomal protein L31 [Rhodococcus opacus B4]
Length=80
Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/68 (84%), Positives = 59/68 (87%), Gaps = 0/68 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MKS IHP Y TTVVCGCGNTF+T STK GRI VEVCSQCHPFYTGKQKILD+GGRVAR
Sbjct 1 MKSGIHPNYVATTVVCGCGNTFETHSTKETGRINVEVCSQCHPFYTGKQKILDTGGRVAR 60
Query 61 FEKRYGKR 68
FE RYGKR
Sbjct 61 FEARYGKR 68
>gi|333920930|ref|YP_004494511.1| 50S ribosomal protein L31 [Amycolicicoccus subflavus DQS3-9A1]
gi|333483151|gb|AEF41711.1| 50S ribosomal protein L31 [Amycolicicoccus subflavus DQS3-9A1]
Length=76
Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/69 (80%), Positives = 59/69 (86%), Gaps = 0/69 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK DIHP Y TTVVCGCGN+F+TRS GRI VEVCSQCHPFYTGKQKILD+GGRVAR
Sbjct 1 MKKDIHPDYVATTVVCGCGNSFETRSAAANGRISVEVCSQCHPFYTGKQKILDTGGRVAR 60
Query 61 FEKRYGKRK 69
FE RYGKR+
Sbjct 61 FEARYGKRQ 69
>gi|296138962|ref|YP_003646205.1| 50S ribosomal protein L31 [Tsukamurella paurometabola DSM 20162]
gi|296027096|gb|ADG77866.1| ribosomal protein L31 [Tsukamurella paurometabola DSM 20162]
Length=76
Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/68 (84%), Positives = 59/68 (87%), Gaps = 0/68 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK IHP Y TTVVCGCGNTF+T STK GRI VEVCSQCHPFYTGKQKILD+GGRVAR
Sbjct 1 MKQGIHPDYVATTVVCGCGNTFETHSTKADGRINVEVCSQCHPFYTGKQKILDTGGRVAR 60
Query 61 FEKRYGKR 68
FEKRYGKR
Sbjct 61 FEKRYGKR 68
>gi|226307405|ref|YP_002767365.1| 50S ribosomal protein L31 [Rhodococcus erythropolis PR4]
gi|229489966|ref|ZP_04383819.1| ribosomal protein L31 [Rhodococcus erythropolis SK121]
gi|226186522|dbj|BAH34626.1| 50S ribosomal protein L31 [Rhodococcus erythropolis PR4]
gi|229323067|gb|EEN88835.1| ribosomal protein L31 [Rhodococcus erythropolis SK121]
Length=78
Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/68 (83%), Positives = 59/68 (87%), Gaps = 0/68 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK+ IHP Y TTVVCGCGNTF+T STK GRI VEVCSQCHPFYTGKQKILD+GGRVAR
Sbjct 1 MKAGIHPTYVATTVVCGCGNTFETHSTKESGRINVEVCSQCHPFYTGKQKILDTGGRVAR 60
Query 61 FEKRYGKR 68
FE RYGKR
Sbjct 61 FEARYGKR 68
>gi|145222894|ref|YP_001133572.1| 50S ribosomal protein L31 [Mycobacterium gilvum PYR-GCK]
gi|315443359|ref|YP_004076238.1| 50S ribosomal protein L31P [Mycobacterium sp. Spyr1]
gi|226708122|sp|A4T8L2.1|RL31_MYCGI RecName: Full=50S ribosomal protein L31
gi|145215380|gb|ABP44784.1| LSU ribosomal protein L31P [Mycobacterium gilvum PYR-GCK]
gi|315261662|gb|ADT98403.1| LSU ribosomal protein L31P [Mycobacterium sp. Spyr1]
Length=70
Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/68 (84%), Positives = 59/68 (87%), Gaps = 0/68 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MKS IHP Y ETTV+CGCG +F TRSTK G I VEVCSQCHPFYTGKQKILDSGGRVAR
Sbjct 1 MKSGIHPDYVETTVLCGCGASFTTRSTKKSGNITVEVCSQCHPFYTGKQKILDSGGRVAR 60
Query 61 FEKRYGKR 68
FEKRYGKR
Sbjct 61 FEKRYGKR 68
>gi|312139165|ref|YP_004006501.1| 50S ribosomal protein l31 rpme [Rhodococcus equi 103S]
gi|325673530|ref|ZP_08153221.1| 50S ribosomal protein L31 [Rhodococcus equi ATCC 33707]
gi|311888504|emb|CBH47816.1| 50S ribosomal protein L31 RpmE [Rhodococcus equi 103S]
gi|325555551|gb|EGD25222.1| 50S ribosomal protein L31 [Rhodococcus equi ATCC 33707]
Length=77
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/77 (76%), Positives = 62/77 (81%), Gaps = 3/77 (3%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK+ IHP Y TTVVCGCGNTF+T ST GRI VEVCSQCHPFYTGKQKILD+GGRVAR
Sbjct 1 MKAGIHPEYVATTVVCGCGNTFETHSTATSGRINVEVCSQCHPFYTGKQKILDTGGRVAR 60
Query 61 FEKRYGKR---KVGADK 74
FE RYGKR K AD+
Sbjct 61 FEARYGKRAGKKAAADQ 77
>gi|284992529|ref|YP_003411083.1| 50S ribosomal protein L31 [Geodermatophilus obscurus DSM 43160]
gi|284065774|gb|ADB76712.1| ribosomal protein L31 [Geodermatophilus obscurus DSM 43160]
Length=74
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/74 (72%), Positives = 58/74 (79%), Gaps = 0/74 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK IHP Y TTV CGCGNTF TRST PGG + VE CS CHPFYTGKQ+ILD+GGRVAR
Sbjct 1 MKPGIHPEYHTTTVTCGCGNTFTTRSTAPGGTLTVETCSACHPFYTGKQRILDTGGRVAR 60
Query 61 FEKRYGKRKVGADK 74
FEKR+GKR A +
Sbjct 61 FEKRFGKRNANAGQ 74
>gi|331695518|ref|YP_004331757.1| 50S ribosomal protein L31 [Pseudonocardia dioxanivorans CB1190]
gi|326950207|gb|AEA23904.1| 50S ribosomal protein L31 [Pseudonocardia dioxanivorans CB1190]
Length=73
Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/68 (81%), Positives = 56/68 (83%), Gaps = 0/68 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MKS IHP Y ETTV CGCGNTF TRSTK G I E CSQCHPFYTGKQ+ILDSGGRVAR
Sbjct 1 MKSGIHPEYVETTVTCGCGNTFTTRSTKTSGSIHAETCSQCHPFYTGKQRILDSGGRVAR 60
Query 61 FEKRYGKR 68
FE RYGKR
Sbjct 61 FEARYGKR 68
>gi|257056965|ref|YP_003134797.1| 50S ribosomal protein L31P [Saccharomonospora viridis DSM 43017]
gi|256586837|gb|ACU97970.1| LSU ribosomal protein L31P [Saccharomonospora viridis DSM 43017]
Length=70
Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/69 (80%), Positives = 57/69 (83%), Gaps = 0/69 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MKS IHP Y TTVVCGCGNTF TRST P I VE+CS CHPFYTGKQKILD+GGRVAR
Sbjct 1 MKSGIHPDYHVTTVVCGCGNTFTTRSTAPSDTIHVEICSNCHPFYTGKQKILDTGGRVAR 60
Query 61 FEKRYGKRK 69
FE RYGKRK
Sbjct 61 FEARYGKRK 69
>gi|326382081|ref|ZP_08203774.1| 50S ribosomal protein L31P [Gordonia neofelifaecis NRRL B-59395]
gi|326199507|gb|EGD56688.1| 50S ribosomal protein L31P [Gordonia neofelifaecis NRRL B-59395]
Length=70
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/68 (81%), Positives = 56/68 (83%), Gaps = 0/68 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK IHP YE TTV CGCGN F TRST GG I VEVCS CHPFYTGKQKILD+GGRVAR
Sbjct 1 MKQGIHPDYEVTTVNCGCGNEFTTRSTAKGGHITVEVCSNCHPFYTGKQKILDTGGRVAR 60
Query 61 FEKRYGKR 68
FEKRYGKR
Sbjct 61 FEKRYGKR 68
>gi|312194809|ref|YP_004014870.1| ribosomal protein L31 [Frankia sp. EuI1c]
gi|311226145|gb|ADP79000.1| ribosomal protein L31 [Frankia sp. EuI1c]
Length=78
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/71 (74%), Positives = 61/71 (86%), Gaps = 0/71 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
M++DIHP YE+TTVVC CG+TF T+STK GG I EVCSQCHPFYTGKQKILD GGRV +
Sbjct 1 MRADIHPTYEDTTVVCSCGSTFTTKSTKAGGTIHAEVCSQCHPFYTGKQKILDVGGRVEK 60
Query 61 FEKRYGKRKVG 71
FE+R+GKR+ G
Sbjct 61 FERRFGKRQPG 71
>gi|317506165|ref|ZP_07963986.1| ribosomal protein L31 [Segniliparus rugosus ATCC BAA-974]
gi|316255510|gb|EFV14759.1| ribosomal protein L31 [Segniliparus rugosus ATCC BAA-974]
Length=70
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/69 (80%), Positives = 58/69 (85%), Gaps = 0/69 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK+ IHP Y TTV CGCG+TFQTRST+ G I VEVCS CHPFYTGKQKILDSGGRVAR
Sbjct 1 MKAGIHPDYVLTTVTCGCGSTFQTRSTETKGAITVEVCSACHPFYTGKQKILDSGGRVAR 60
Query 61 FEKRYGKRK 69
FE RYGKRK
Sbjct 61 FEARYGKRK 69
>gi|302529801|ref|ZP_07282143.1| ribosomal protein L31 [Streptomyces sp. AA4]
gi|302438696|gb|EFL10512.1| ribosomal protein L31 [Streptomyces sp. AA4]
Length=75
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/73 (73%), Positives = 59/73 (81%), Gaps = 0/73 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MKS IHP Y TTV C CGN+F TRSTK G+I VE+CS CHPFYTGKQKI+D+GGRVAR
Sbjct 1 MKSGIHPEYVTTTVTCNCGNSFVTRSTKESGQIHVEICSNCHPFYTGKQKIMDTGGRVAR 60
Query 61 FEKRYGKRKVGAD 73
FEKRYGKR+ D
Sbjct 61 FEKRYGKRQQKTD 73
>gi|296393115|ref|YP_003657999.1| 50S ribosomal protein L31 [Segniliparus rotundus DSM 44985]
gi|296180262|gb|ADG97168.1| ribosomal protein L31 [Segniliparus rotundus DSM 44985]
Length=70
Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/69 (77%), Positives = 59/69 (86%), Gaps = 0/69 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
M++ IHP Y TTV+CGCGNTFQTRST+ G I VEVCS CHPFYTGKQK+LDSGGRVAR
Sbjct 1 MQAGIHPKYVLTTVMCGCGNTFQTRSTETKGAISVEVCSGCHPFYTGKQKMLDSGGRVAR 60
Query 61 FEKRYGKRK 69
FE RYGKR+
Sbjct 61 FESRYGKRR 69
>gi|284032946|ref|YP_003382877.1| 50S ribosomal protein L31 [Kribbella flavida DSM 17836]
gi|283812239|gb|ADB34078.1| ribosomal protein L31 [Kribbella flavida DSM 17836]
Length=68
Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/68 (77%), Positives = 56/68 (83%), Gaps = 0/68 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MKSDIHP Y +TTV C CG TFQTRST G I +VCSQCHPFYTGKQKILD+GGRVAR
Sbjct 1 MKSDIHPTYVDTTVTCTCGATFQTRSTAESGSIHADVCSQCHPFYTGKQKILDTGGRVAR 60
Query 61 FEKRYGKR 68
FEKRY K+
Sbjct 61 FEKRYAKK 68
>gi|256825644|ref|YP_003149604.1| 50S ribosomal protein L31P [Kytococcus sedentarius DSM 20547]
gi|256689037|gb|ACV06839.1| LSU ribosomal protein L31P [Kytococcus sedentarius DSM 20547]
Length=71
Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 50/68 (74%), Positives = 59/68 (87%), Gaps = 0/68 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
M+ DIHPAY+ T VVC CG+TF TRST GGR+ V+VCSQCHPFYTGKQKILD+GGRVAR
Sbjct 1 MRKDIHPAYDTTEVVCTCGSTFTTRSTADGGRMSVDVCSQCHPFYTGKQKILDTGGRVAR 60
Query 61 FEKRYGKR 68
F++RYG +
Sbjct 61 FQQRYGNK 68
>gi|117927848|ref|YP_872399.1| 50S ribosomal protein L31P [Acidothermus cellulolyticus 11B]
gi|226705337|sp|A0LSK3.1|RL31_ACIC1 RecName: Full=50S ribosomal protein L31
gi|117648311|gb|ABK52413.1| LSU ribosomal protein L31P [Acidothermus cellulolyticus 11B]
Length=86
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/80 (69%), Positives = 59/80 (74%), Gaps = 0/80 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK DIHP Y ETTV+C CGNTF TRST G I EVCS CHPFYTGKQKILD GGRV +
Sbjct 1 MKPDIHPEYRETTVICSCGNTFTTRSTAKSGVIHAEVCSNCHPFYTGKQKILDVGGRVQK 60
Query 61 FEKRYGKRKVGADKAVSTGK 80
FEKR+G+ A A STGK
Sbjct 61 FEKRFGQLTGAARVARSTGK 80
>gi|256390406|ref|YP_003111970.1| 50S ribosomal protein L31 [Catenulispora acidiphila DSM 44928]
gi|256356632|gb|ACU70129.1| ribosomal protein L31 [Catenulispora acidiphila DSM 44928]
Length=72
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/68 (74%), Positives = 57/68 (84%), Gaps = 0/68 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK DIHP+Y+ TTV CGCG +F+T ST P G I EVCSQCHPFYTGKQKILD+GGRVAR
Sbjct 1 MKPDIHPSYQVTTVTCGCGASFETHSTAPNGVIHAEVCSQCHPFYTGKQKILDTGGRVAR 60
Query 61 FEKRYGKR 68
FE R+GK+
Sbjct 61 FEARFGKK 68
>gi|134102729|ref|YP_001108390.1| 50S ribosomal protein L31 [Saccharopolyspora erythraea NRRL 2338]
gi|226708170|sp|A4FN40.1|RL31_SACEN RecName: Full=50S ribosomal protein L31
gi|133915352|emb|CAM05465.1| 50S ribosomal protein L31 [Saccharopolyspora erythraea NRRL 2338]
Length=70
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/69 (74%), Positives = 57/69 (83%), Gaps = 0/69 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MKS IHP Y T V CGCGN+F TRST+ G+I VE+CS CHPFYTGKQKILD+GGRVAR
Sbjct 1 MKSGIHPEYVTTQVNCGCGNSFTTRSTRTSGQITVEICSNCHPFYTGKQKILDTGGRVAR 60
Query 61 FEKRYGKRK 69
FE RYG+RK
Sbjct 61 FEARYGRRK 69
>gi|158312863|ref|YP_001505371.1| 50S ribosomal protein L31 [Frankia sp. EAN1pec]
gi|226705275|sp|A8L3V0.1|RL31_FRASN RecName: Full=50S ribosomal protein L31
gi|158108268|gb|ABW10465.1| ribosomal protein L31 [Frankia sp. EAN1pec]
Length=78
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/71 (72%), Positives = 58/71 (82%), Gaps = 0/71 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK+DIHP Y ETTV C CG+TF TRSTK G I EVCSQCHPFYTGKQKILD GGRV +
Sbjct 1 MKADIHPQYHETTVTCTCGSTFTTRSTKENGAISAEVCSQCHPFYTGKQKILDVGGRVEK 60
Query 61 FEKRYGKRKVG 71
FE+R+G+R+ G
Sbjct 61 FERRFGRRQPG 71
>gi|336179680|ref|YP_004585055.1| 50S ribosomal protein L31 [Frankia symbiont of Datisca glomerata]
gi|334860660|gb|AEH11134.1| 50S ribosomal protein L31 [Frankia symbiont of Datisca glomerata]
Length=79
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/80 (68%), Positives = 63/80 (79%), Gaps = 1/80 (1%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
M++DIHP Y ETTVVC CG+TF TRSTK I EVCSQCHPFYTGKQKILD GGRV +
Sbjct 1 MRADIHPTYHETTVVCTCGSTFTTRSTKSDAVIHAEVCSQCHPFYTGKQKILDVGGRVEK 60
Query 61 FEKRYGKRKVGADKAVSTGK 80
FE+R+G+R+ G DK +T K
Sbjct 61 FERRFGRRRPG-DKPGTTAK 79
>gi|313827398|gb|EFS65112.1| ribosomal protein L31 [Propionibacterium acnes HL063PA2]
Length=69
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/69 (73%), Positives = 57/69 (83%), Gaps = 0/69 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK +IHP Y ETTVVC CGNTF TRST G + +VCS+CHPFYTGKQKILD+GGRVAR
Sbjct 1 MKQEIHPDYRETTVVCTCGNTFTTRSTSQSGTLNADVCSKCHPFYTGKQKILDAGGRVAR 60
Query 61 FEKRYGKRK 69
FE+RYGK+
Sbjct 61 FERRYGKKN 69
>gi|86742402|ref|YP_482802.1| 50S ribosomal protein L31 [Frankia sp. CcI3]
gi|124056500|sp|Q2J6L9.1|RL31_FRASC RecName: Full=50S ribosomal protein L31
gi|86569264|gb|ABD13073.1| LSU ribosomal protein L31P [Frankia sp. CcI3]
Length=78
Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/71 (71%), Positives = 57/71 (81%), Gaps = 0/71 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK D+HP Y ETTV C CGNTF TRSTK G + EVCSQCHPFYTGKQKILD GGRV +
Sbjct 1 MKPDVHPTYHETTVTCTCGNTFTTRSTKENGVVNAEVCSQCHPFYTGKQKILDVGGRVEK 60
Query 61 FEKRYGKRKVG 71
FE+R+G+R+ G
Sbjct 61 FERRFGRRRPG 71
>gi|325002819|ref|ZP_08123931.1| 50S ribosomal protein L31 [Pseudonocardia sp. P1]
Length=74
Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (80%), Gaps = 0/68 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
M+ +HP Y +T V CGCGN F TRSTK G I VEVCS CHPFYTGKQKILDSGGRVAR
Sbjct 1 MREGVHPQYVDTQVTCGCGNQFTTRSTKANGAITVEVCSACHPFYTGKQKILDSGGRVAR 60
Query 61 FEKRYGKR 68
FE RYGKR
Sbjct 61 FEARYGKR 68
>gi|256380144|ref|YP_003103804.1| 50S ribosomal protein L31 [Actinosynnema mirum DSM 43827]
gi|255924447|gb|ACU39958.1| ribosomal protein L31 [Actinosynnema mirum DSM 43827]
Length=70
Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/68 (77%), Positives = 55/68 (81%), Gaps = 0/68 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK+ IHP Y +T V CGCGNTF T STK G I VEVCS CHPFYTGKQKILD+GGRVAR
Sbjct 1 MKTGIHPEYVKTEVTCGCGNTFTTHSTKTSGAIHVEVCSNCHPFYTGKQKILDTGGRVAR 60
Query 61 FEKRYGKR 68
FE RYGKR
Sbjct 61 FEARYGKR 68
>gi|258652311|ref|YP_003201467.1| 50S ribosomal protein L31 [Nakamurella multipartita DSM 44233]
gi|258555536|gb|ACV78478.1| ribosomal protein L31 [Nakamurella multipartita DSM 44233]
Length=70
Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/68 (77%), Positives = 56/68 (83%), Gaps = 0/68 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK+ IHP Y T V CGCGNTF TRST+ G+I VEVCS CHPFYTGKQKILD+GGRVAR
Sbjct 1 MKTGIHPTYVTTEVHCGCGNTFTTRSTETSGQIHVEVCSNCHPFYTGKQKILDTGGRVAR 60
Query 61 FEKRYGKR 68
FE RYGKR
Sbjct 61 FEARYGKR 68
>gi|257069076|ref|YP_003155331.1| 50S ribosomal protein L31P [Brachybacterium faecium DSM 4810]
gi|256559894|gb|ACU85741.1| LSU ribosomal protein L31P [Brachybacterium faecium DSM 4810]
Length=71
Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 50/68 (74%), Positives = 56/68 (83%), Gaps = 0/68 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK++IHPAY ET V C CGN+F TRSTK G I EVCS CHPFYTGKQKILD+GGRVAR
Sbjct 1 MKAEIHPAYVETQVTCTCGNSFTTRSTKSDGVISTEVCSACHPFYTGKQKILDTGGRVAR 60
Query 61 FEKRYGKR 68
F+ RYGK+
Sbjct 61 FQARYGKK 68
>gi|50842732|ref|YP_055959.1| 50S ribosomal protein L31 [Propionibacterium acnes KPA171202]
gi|282853789|ref|ZP_06263126.1| ribosomal protein L31 [Propionibacterium acnes J139]
gi|289425204|ref|ZP_06426981.1| ribosomal protein L31 [Propionibacterium acnes SK187]
79 more sequence titles
Length=69
Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/69 (73%), Positives = 56/69 (82%), Gaps = 0/69 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK IHP Y ETTVVC CGNTF TRST G + +VCS+CHPFYTGKQKILD+GGRVAR
Sbjct 1 MKQGIHPDYRETTVVCTCGNTFTTRSTSQSGTLNADVCSKCHPFYTGKQKILDAGGRVAR 60
Query 61 FEKRYGKRK 69
FE+RYGK+
Sbjct 61 FERRYGKKN 69
>gi|111225295|ref|YP_716089.1| 50S ribosomal protein L31 [Frankia alni ACN14a]
gi|123142638|sp|Q0RD99.1|RL31_FRAAA RecName: Full=50S ribosomal protein L31
gi|111152827|emb|CAJ64572.1| 50S ribosomal subunit protein L31 [Frankia alni ACN14a]
Length=78
Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/71 (71%), Positives = 58/71 (82%), Gaps = 0/71 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK+DIHP Y ETTV C CG+TF TRSTK G + EVCSQCHPFYTGKQKILD GGRV +
Sbjct 1 MKADIHPTYHETTVNCTCGSTFTTRSTKENGVVNAEVCSQCHPFYTGKQKILDVGGRVEK 60
Query 61 FEKRYGKRKVG 71
FE+R+G+R+ G
Sbjct 61 FERRFGRRRPG 71
>gi|289178288|gb|ADC85534.1| LSU ribosomal protein L31P [Bifidobacterium animalis subsp. lactis
BB-12]
gi|340364678|gb|AEK29969.1| LSU ribosomal protein L31P [Bifidobacterium animalis subsp. lactis
CNCM I-2494]
Length=117
Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 48/69 (70%), Positives = 56/69 (82%), Gaps = 0/69 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
M+ IHP Y + TV C CGNTF+TRST G + V+VCS+CHPFYTGKQKILD+GGRVAR
Sbjct 49 MQQGIHPDYHKVTVTCSCGNTFETRSTAKGDHMTVDVCSKCHPFYTGKQKILDTGGRVAR 108
Query 61 FEKRYGKRK 69
FEKRYGK+
Sbjct 109 FEKRYGKKN 117
>gi|84494540|ref|ZP_00993659.1| 50S ribosomal protein L31 [Janibacter sp. HTCC2649]
gi|84384033|gb|EAP99913.1| 50S ribosomal protein L31 [Janibacter sp. HTCC2649]
Length=71
Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/68 (74%), Positives = 54/68 (80%), Gaps = 0/68 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK DIHP Y ETTV C CG +F TRST G I EVCSQCHPFYTGKQKILD+GGRVAR
Sbjct 1 MKKDIHPNYAETTVTCTCGASFTTRSTAESGAIHAEVCSQCHPFYTGKQKILDTGGRVAR 60
Query 61 FEKRYGKR 68
F+ RYGK+
Sbjct 61 FQARYGKK 68
>gi|288922981|ref|ZP_06417138.1| ribosomal protein L31 [Frankia sp. EUN1f]
gi|288345657|gb|EFC80029.1| ribosomal protein L31 [Frankia sp. EUN1f]
Length=78
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 59/75 (79%), Gaps = 1/75 (1%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK+DIHP Y ET V C CG+TF TRSTK I EVCSQCHPFYTGKQKI+D GGRV +
Sbjct 1 MKADIHPTYHETVVTCTCGSTFTTRSTKDNAAISAEVCSQCHPFYTGKQKIMDVGGRVEK 60
Query 61 FEKRYGKRKVGADKA 75
FE+R+G+R+ G DKA
Sbjct 61 FERRFGRRRPG-DKA 74
>gi|326771966|ref|ZP_08231251.1| ribosomal protein L31 [Actinomyces viscosus C505]
gi|326638099|gb|EGE39000.1| ribosomal protein L31 [Actinomyces viscosus C505]
Length=100
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (80%), Gaps = 0/68 (0%)
Query 1 MKSDIHPAYEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVAR 60
MK IHP Y TTV C CGNTF+TRST G I V+VCS CHPFYTGKQKILD+GGRVAR
Sbjct 31 MKQGIHPDYVATTVTCTCGNTFETRSTVTSGEIRVDVCSACHPFYTGKQKILDTGGRVAR 90
Query 61 FEKRYGKR 68
FE RYGKR
Sbjct 91 FEARYGKR 98
Lambda K H
0.318 0.135 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128850890930
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40