BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1299 Length=357 Score E Sequences producing significant alignments: (Bits) Value gi|15608439|ref|NP_215815.1| peptide chain release factor 1 [Myc... 720 0.0 gi|296170240|ref|ZP_06851833.1| peptide chain release factor RF1... 662 0.0 gi|15827565|ref|NP_301828.1| peptide chain release factor 1 [Myc... 652 0.0 gi|699334|gb|AAA63095.1| prfA [Mycobacterium leprae] 644 0.0 gi|333989938|ref|YP_004522552.1| peptide chain release factor 1 ... 632 3e-179 gi|240169515|ref|ZP_04748174.1| peptide chain release factor 1 [... 631 6e-179 gi|342858040|ref|ZP_08714696.1| peptide chain release factor 1 [... 628 6e-178 gi|254821298|ref|ZP_05226299.1| peptide chain release factor 1 [... 623 1e-176 gi|41408560|ref|NP_961396.1| peptide chain release factor 1 [Myc... 620 7e-176 gi|118619169|ref|YP_907501.1| peptide chain release factor 1 [My... 620 9e-176 gi|118464752|ref|YP_880755.1| peptide chain release factor 1 [My... 618 6e-175 gi|183984069|ref|YP_001852360.1| peptide chain release factor 1 ... 599 2e-169 gi|108800851|ref|YP_641048.1| peptide chain release factor 1 [My... 592 4e-167 gi|226307404|ref|YP_002767364.1| peptide chain release factor 1 ... 565 5e-159 gi|120405293|ref|YP_955122.1| peptide chain release factor 1 [My... 563 2e-158 gi|118469567|ref|YP_889202.1| peptide chain release factor 1 [My... 561 4e-158 gi|343928059|ref|ZP_08767524.1| peptide chain release factor 1 [... 535 5e-150 gi|145222895|ref|YP_001133573.1| peptide chain release factor 1 ... 533 2e-149 gi|111018484|ref|YP_701456.1| peptide chain release factor 1 [Rh... 527 9e-148 gi|333920929|ref|YP_004494510.1| peptide chain release factor 1 ... 526 3e-147 gi|226360607|ref|YP_002778385.1| peptide chain release factor 1 ... 523 2e-146 gi|169628533|ref|YP_001702182.1| peptide chain release factor 1 ... 521 5e-146 gi|54023021|ref|YP_117263.1| peptide chain release factor 1 [Noc... 520 1e-145 gi|326382082|ref|ZP_08203775.1| peptide chain release factor 1 [... 514 1e-143 gi|296138963|ref|YP_003646206.1| peptide chain release factor 1 ... 513 2e-143 gi|312139166|ref|YP_004006502.1| peptide chain release factor 1 ... 507 1e-141 gi|319948468|ref|ZP_08022604.1| peptide chain release factor 1 [... 498 5e-139 gi|262201848|ref|YP_003273056.1| peptide chain release factor 1 ... 498 8e-139 gi|256380143|ref|YP_003103803.1| peptide chain release factor 1 ... 496 2e-138 gi|336325979|ref|YP_004605945.1| peptide chain release factor RF... 480 2e-133 gi|331695519|ref|YP_004331758.1| peptide chain release factor 1 ... 477 2e-132 gi|227487967|ref|ZP_03918283.1| peptide chain release factor 1 [... 470 1e-130 gi|334564797|ref|ZP_08517788.1| peptide chain release factor 1 [... 468 6e-130 gi|213964464|ref|ZP_03392664.1| peptide chain release factor 1 [... 468 7e-130 gi|271963194|ref|YP_003337390.1| peptide chain release factor 1 ... 466 3e-129 gi|25027860|ref|NP_737914.1| peptide chain release factor 1 [Cor... 465 4e-129 gi|172040385|ref|YP_001800099.1| peptide chain release factor 1 ... 465 5e-129 gi|302529800|ref|ZP_07282142.1| peptide chain release factor 1 [... 465 5e-129 gi|260577564|ref|ZP_05845503.1| peptide chain release factor 1 [... 463 2e-128 gi|68536431|ref|YP_251136.1| peptide chain release factor 1 [Cor... 463 2e-128 gi|258652312|ref|YP_003201468.1| peptide chain release factor 1 ... 462 4e-128 gi|237785868|ref|YP_002906573.1| peptide chain release factor 1 ... 461 8e-128 gi|134102728|ref|YP_001108389.1| putative peptide chain release ... 456 3e-126 gi|300858256|ref|YP_003783239.1| peptide chain release factor RF... 453 2e-125 gi|340531265|gb|AEK46470.1| peptide chain release factor RF-1 [A... 452 4e-125 gi|296119521|ref|ZP_06838079.1| peptide chain release factor 1 [... 452 5e-125 gi|300789609|ref|YP_003769900.1| peptide chain release factor RF... 451 1e-124 gi|19552424|ref|NP_600426.1| peptide chain release factor 1 [Cor... 450 2e-124 gi|340794797|ref|YP_004760260.1| peptide chain release factor RF... 448 5e-124 gi|337290510|ref|YP_004629531.1| peptide chain release factor RF... 447 2e-123 >gi|15608439|ref|NP_215815.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Rv] gi|15840749|ref|NP_335786.1| peptide chain release factor 1 [Mycobacterium tuberculosis CDC1551] gi|31792492|ref|NP_854985.1| peptide chain release factor 1 [Mycobacterium bovis AF2122/97] 84 more sequence titles Length=357 Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/357 (100%), Positives = 357/357 (100%), Gaps = 0/357 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD Sbjct 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES Sbjct 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG Sbjct 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT Sbjct 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR Sbjct 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLRQS 357 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLRQS Sbjct 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLRQS 357 >gi|296170240|ref|ZP_06851833.1| peptide chain release factor RF1 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895116|gb|EFG74834.1| peptide chain release factor RF1 [Mycobacterium parascrofulaceum ATCC BAA-614] Length=357 Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/357 (92%), Positives = 337/357 (95%), Gaps = 0/357 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 MTQPVQTIDVLLAEHAELE LADP LHSNPAEAR+ GRRFARLAPIVAT+RKL SAR D Sbjct 1 MTQPVQTIDVLLAEHAELEQRLADPDLHSNPAEARKAGRRFARLAPIVATYRKLESARGD 60 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 LETAREL A DESFA EV L ARV ELD QLTDMLAPRDPHDADDIVLEVKSGEGGEES Sbjct 61 LETARELAADDESFADEVTELAARVAELDTQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFAADLARMYIRYAERHGW VTVLDETTSDLGGYKDATL+IASK D+ DGVWSRMKFEG Sbjct 121 ALFAADLARMYIRYAERHGWNVTVLDETTSDLGGYKDATLSIASKGDSADGVWSRMKFEG 180 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVG+V IDESDLRIDV+RSSGKGGQGVNT Sbjct 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGEVHIDESDLRIDVYRSSGKGGQGVNT 240 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVRITHLPTGIVVTCQNERSQLQNK RALQVLAARLQAMAEEQALADASADRASQIR Sbjct 241 TDSAVRITHLPTGIVVTCQNERSQLQNKARALQVLAARLQAMAEEQALADASADRASQIR 300 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLRQS 357 TVDRSERIRTYNFPENRITDHRIGYK+HNLDQVLDGDLDA+FDAL AADKQ+RL+Q+ Sbjct 301 TVDRSERIRTYNFPENRITDHRIGYKAHNLDQVLDGDLDAMFDALGAADKQARLQQA 357 >gi|15827565|ref|NP_301828.1| peptide chain release factor 1 [Mycobacterium leprae TN] gi|221230042|ref|YP_002503458.1| peptide chain release factor 1 [Mycobacterium leprae Br4923] gi|13432207|sp|P45833.2|RF1_MYCLE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790892|sp|B8ZR31.1|RF1_MYCLB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|13093115|emb|CAC31515.1| peptide chain release factor 1 [Mycobacterium leprae] gi|219933149|emb|CAR71229.1| peptide chain release factor 1 [Mycobacterium leprae Br4923] Length=361 Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/360 (90%), Positives = 335/360 (94%), Gaps = 4/360 (1%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 M QPVQ+IDVLL EHAELELALADP LHSNPAEAR+ GRRFARLAPIVATHRKL SARDD Sbjct 1 MAQPVQSIDVLLIEHAELELALADPELHSNPAEARKAGRRFARLAPIVATHRKLISARDD 60 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 L+TAREL A DESFA E+A LE+R+ EL QLTDMLAP DPH DDIVLEVKSGEGGEES Sbjct 61 LQTARELAAGDESFADEIAELESRIAELTTQLTDMLAPHDPHGPDDIVLEVKSGEGGEES 120 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAI----ASKADTPDGVWSRM 176 ALFAADLARMYIRYAERHGW VTVLDETTSDLGGYKDATLAI AS D DGVWSRM Sbjct 121 ALFAADLARMYIRYAERHGWTVTVLDETTSDLGGYKDATLAISHKGASDGDAVDGVWSRM 180 Query 177 KFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQ 236 KFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEE+G+V IDESDLRIDV+RSSGKGGQ Sbjct 181 KFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEIGEVHIDESDLRIDVYRSSGKGGQ 240 Query 237 GVNTTDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRA 296 GVNTTDSAVRITHLPTG+VVTCQNERSQLQNKTRALQVLAARLQAMAEEQALA+ASADRA Sbjct 241 GVNTTDSAVRITHLPTGVVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALANASADRA 300 Query 297 SQIRTVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLRQ 356 SQIRTVDRSERIRTYNFPENRITDHRIGYK+HNLDQVLDGDLDALFDALSAADKQSRL+Q Sbjct 301 SQIRTVDRSERIRTYNFPENRITDHRIGYKAHNLDQVLDGDLDALFDALSAADKQSRLQQ 360 >gi|699334|gb|AAA63095.1| prfA [Mycobacterium leprae] Length=357 Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust. Identities = 318/356 (90%), Positives = 332/356 (94%), Gaps = 4/356 (1%) Query 5 VQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLETA 64 +Q+IDVLL EHAELELALADP LHSNPAEAR+ GRRFARLAPIVATHRKL SARDDL+TA Sbjct 1 MQSIDVLLIEHAELELALADPELHSNPAEARKAGRRFARLAPIVATHRKLISARDDLQTA 60 Query 65 RELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFA 124 REL A DESFA E+A LE+R+ EL QLTDMLAP DPH DDIVLEVKSGEGGEESALFA Sbjct 61 RELAAGDESFADEIAELESRIAELTTQLTDMLAPHDPHGPDDIVLEVKSGEGGEESALFA 120 Query 125 ADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAI----ASKADTPDGVWSRMKFEG 180 ADLARMYIRYAERHGW VTVLDETTSDLGGYKDATLAI AS D DGVWSRMKFEG Sbjct 121 ADLARMYIRYAERHGWTVTVLDETTSDLGGYKDATLAISHKGASDGDAVDGVWSRMKFEG 180 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEE+G+V IDESDLRIDV+RSSGKGGQGVNT Sbjct 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEIGEVHIDESDLRIDVYRSSGKGGQGVNT 240 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVRITHLPTG+VVTCQNERSQLQNKTRALQVLAARLQAMAEEQALA+ASADRASQIR Sbjct 241 TDSAVRITHLPTGVVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALANASADRASQIR 300 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLRQ 356 TVDRSERIRTYNFPENRITDHRIGYK+HNLDQVLDGDLDALFDALSAADKQSRL+Q Sbjct 301 TVDRSERIRTYNFPENRITDHRIGYKAHNLDQVLDGDLDALFDALSAADKQSRLQQ 356 >gi|333989938|ref|YP_004522552.1| peptide chain release factor 1 [Mycobacterium sp. JDM601] gi|333485906|gb|AEF35298.1| peptide chain release factor 1 PrfA [Mycobacterium sp. JDM601] Length=358 Score = 632 bits (1630), Expect = 3e-179, Method: Compositional matrix adjust. Identities = 308/355 (87%), Positives = 327/355 (93%), Gaps = 0/355 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 MT+ +Q ID LLAEHA LE LADP LH++P EARR GRRFA+LAPI+ATHRKL SAR D Sbjct 1 MTRSMQAIDALLAEHAALETQLADPELHNDPVEARRAGRRFAQLAPIIATHRKLESARGD 60 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 LE AREL A D SFAAEV LEARV ELD LTDMLAPRDPHDADDIVLEVKSGEGGEES Sbjct 61 LEAARELAADDASFAAEVPELEARVAELDTTLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFAADLARMYIRYAERHGW VTVLDETTSDLGGYKDAT+ IASK DT DGVWS+MKFEG Sbjct 121 ALFAADLARMYIRYAERHGWKVTVLDETTSDLGGYKDATITIASKGDTADGVWSKMKFEG 180 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEV +V IDESDLR+DV+RSSGKGGQGVNT Sbjct 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVAEVAIDESDLRVDVYRSSGKGGQGVNT 240 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVR+THLPTGIVVTCQNERSQLQNK RALQVLAARLQA+AEEQA ADASADRASQIR Sbjct 241 TDSAVRLTHLPTGIVVTCQNERSQLQNKARALQVLAARLQALAEEQAQADASADRASQIR 300 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLR 355 TVDRSERIRTYNFPENRITDHRIGYK+HNLDQVLDGDLDA+FDAL+AADK++RL+ Sbjct 301 TVDRSERIRTYNFPENRITDHRIGYKAHNLDQVLDGDLDAMFDALAAADKETRLQ 355 >gi|240169515|ref|ZP_04748174.1| peptide chain release factor 1 [Mycobacterium kansasii ATCC 12478] Length=357 Score = 631 bits (1627), Expect = 6e-179, Method: Compositional matrix adjust. Identities = 324/357 (91%), Positives = 340/357 (96%), Gaps = 0/357 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 MTQPV TIDVLLAEHA+LE AL+DP LHSNP AR+ GRRFA LAPIVATHRKL +AR+D Sbjct 1 MTQPVHTIDVLLAEHADLEHALSDPELHSNPGAARKAGRRFALLAPIVATHRKLVAARED 60 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 LETAREL ASD+SF AE A LEARV ELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES Sbjct 61 LETARELAASDDSFVAEAAELEARVAELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFAADLARMYIRYAER GW VTVLDETTSDLGGYKDATLAIASK D+ DGVWSRMKFEG Sbjct 121 ALFAADLARMYIRYAERRGWTVTVLDETTSDLGGYKDATLAIASKGDSVDGVWSRMKFEG 180 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVG+VQIDESDLRIDV+RSSGKGGQGVNT Sbjct 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGEVQIDESDLRIDVYRSSGKGGQGVNT 240 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQ+MAEEQALADASADRASQIR Sbjct 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQSMAEEQALADASADRASQIR 300 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLRQS 357 TVDRSERIRTYNFPENRITDHRIGYK++NLDQVLDGDLDALFDAL+AADKQ+RL++S Sbjct 301 TVDRSERIRTYNFPENRITDHRIGYKAYNLDQVLDGDLDALFDALAAADKQARLQRS 357 >gi|342858040|ref|ZP_08714696.1| peptide chain release factor 1 [Mycobacterium colombiense CECT 3035] gi|342135373|gb|EGT88539.1| peptide chain release factor 1 [Mycobacterium colombiense CECT 3035] Length=357 Score = 628 bits (1619), Expect = 6e-178, Method: Compositional matrix adjust. Identities = 322/357 (91%), Positives = 336/357 (95%), Gaps = 0/357 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 MT+PVQTIDVLLAEHA+LE LADP LHSNP EAR+ GRRFARLAPIV T+RKL +ARDD Sbjct 1 MTKPVQTIDVLLAEHADLERRLADPELHSNPDEARKAGRRFARLAPIVGTYRKLVAARDD 60 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 LETAREL A D SFAAEV LE +V ELD QLTDMLAPRDPHDADDIVLEVKSGEGGEES Sbjct 61 LETARELAADDASFAAEVTDLETQVAELDTQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFAADLARMYIRYAERHGW VTVLDETTSDLGGYKDATLAIASK DT DGVWSRMKFEG Sbjct 121 ALFAADLARMYIRYAERHGWTVTVLDETTSDLGGYKDATLAIASKGDTADGVWSRMKFEG 180 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVG+VQIDESDLRIDV+RSSGKGGQGVNT Sbjct 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGEVQIDESDLRIDVYRSSGKGGQGVNT 240 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVRITHLPTGIVVTCQNERSQLQNK RALQVLAARLQA+AEEQALADASADRASQIR Sbjct 241 TDSAVRITHLPTGIVVTCQNERSQLQNKARALQVLAARLQALAEEQALADASADRASQIR 300 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLRQS 357 TVDRSERIRTYNFPENRI DHRI +K+HNLDQVLDGDLDALFDAL+AADKQSRL+Q+ Sbjct 301 TVDRSERIRTYNFPENRIADHRINFKAHNLDQVLDGDLDALFDALAAADKQSRLQQA 357 >gi|254821298|ref|ZP_05226299.1| peptide chain release factor 1 [Mycobacterium intracellulare ATCC 13950] Length=357 Score = 623 bits (1607), Expect = 1e-176, Method: Compositional matrix adjust. Identities = 317/357 (89%), Positives = 337/357 (95%), Gaps = 0/357 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 MT+PVQTIDVLLAEHA+LE LADP LHSNP EAR+ GRRFARLAPIV T+RKL +AR+D Sbjct 1 MTKPVQTIDVLLAEHADLERRLADPELHSNPDEARKAGRRFARLAPIVGTYRKLMAARED 60 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 LE AREL A D+SFAAE + LE+RV ELD QLTDMLAPRDPHDADDIVLEVKSGEGGEES Sbjct 61 LEAARELAADDDSFAAEASDLESRVAELDTQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFAADLARMYIRYAERHGW VTVLDETTSDLGGYKDATL+IASK D+ DGVWSRMKFEG Sbjct 121 ALFAADLARMYIRYAERHGWTVTVLDETTSDLGGYKDATLSIASKGDSADGVWSRMKFEG 180 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEE+G+VQIDESDLRIDV+RSSGKGGQGVNT Sbjct 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEIGEVQIDESDLRIDVYRSSGKGGQGVNT 240 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVRITHLPTGIVVTCQNERSQLQNK RALQVLAARLQ++AEEQALADASADRASQIR Sbjct 241 TDSAVRITHLPTGIVVTCQNERSQLQNKARALQVLAARLQSLAEEQALADASADRASQIR 300 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLRQS 357 TVDRSERIRTYNFPENRI DHRI +KSHNLDQVLDGDLDALFDAL+AADKQSRL+Q+ Sbjct 301 TVDRSERIRTYNFPENRIADHRINFKSHNLDQVLDGDLDALFDALAAADKQSRLQQA 357 >gi|41408560|ref|NP_961396.1| peptide chain release factor 1 [Mycobacterium avium subsp. paratuberculosis K-10] gi|254774338|ref|ZP_05215854.1| peptide chain release factor 1 [Mycobacterium avium subsp. avium ATCC 25291] gi|61214644|sp|Q73X48.1|RF1_MYCPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|41396918|gb|AAS04779.1| PrfA [Mycobacterium avium subsp. paratuberculosis K-10] gi|336460910|gb|EGO39793.1| peptide chain release factor 1 [Mycobacterium avium subsp. paratuberculosis S397] Length=357 Score = 620 bits (1600), Expect = 7e-176, Method: Compositional matrix adjust. Identities = 317/357 (89%), Positives = 336/357 (95%), Gaps = 0/357 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 MTQPVQTIDVLLAEHA+LE L+DP LHSNP EAR+ GRRFARLAPIV T+RKL +AR+D Sbjct 1 MTQPVQTIDVLLAEHADLERRLSDPDLHSNPDEARKAGRRFARLAPIVGTYRKLMAARED 60 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 LETAREL A D+SF AEVA LE+RV +LD QLTDMLAPRDPHDADDIVLEVKSGEGGEES Sbjct 61 LETARELAADDDSFTAEVADLESRVAQLDTQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFAADLARMYIRYAERHGW VTVLDE TSDLGGYKDATL+I SK D+ DGVWSRMKFEG Sbjct 121 ALFAADLARMYIRYAERHGWTVTVLDEITSDLGGYKDATLSIRSKGDSADGVWSRMKFEG 180 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEV +VQIDESDLRIDVFRSSGKGGQGVNT Sbjct 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVAEVQIDESDLRIDVFRSSGKGGQGVNT 240 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVRITHLPTG+VVTCQNERSQLQNK RALQVLAARLQAMAEEQA A+ASADRASQIR Sbjct 241 TDSAVRITHLPTGVVVTCQNERSQLQNKARALQVLAARLQAMAEEQASAEASADRASQIR 300 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLRQS 357 TVDRSERIRTYNFPENRITDHRIG+K+HNLDQVLDGDLDALFDAL+AADKQSRL+Q+ Sbjct 301 TVDRSERIRTYNFPENRITDHRIGFKAHNLDQVLDGDLDALFDALAAADKQSRLQQA 357 >gi|118619169|ref|YP_907501.1| peptide chain release factor 1 [Mycobacterium ulcerans Agy99] gi|166223575|sp|A0PUL1.1|RF1_MYCUA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|118571279|gb|ABL06030.1| peptide chain release factor 1 PrfA [Mycobacterium ulcerans Agy99] Length=357 Score = 620 bits (1600), Expect = 9e-176, Method: Compositional matrix adjust. Identities = 318/357 (90%), Positives = 336/357 (95%), Gaps = 0/357 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 M PVQTIDVLLAEHA+LE ALADP LHS P EAR+ GRRFARLA IVAT+RKL +AR+D Sbjct 1 MAAPVQTIDVLLAEHADLERALADPELHSRPDEARKAGRRFARLARIVATYRKLVAARED 60 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 LETA EL A+DESF AE A LEARV ELD+QLTDMLAPRDPHDADDIVLEVKSGEGGEES Sbjct 61 LETAHELAATDESFVAEAAELEARVAELDSQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFAADLARMYIRYAERHGW VTVL ETTSDLGGY+DATLAIASK DT DGVWSRMKFEG Sbjct 121 ALFAADLARMYIRYAERHGWTVTVLGETTSDLGGYRDATLAIASKGDTADGVWSRMKFEG 180 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVG+VQIDESDLRIDV+RSSGKGGQGVNT Sbjct 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGEVQIDESDLRIDVYRSSGKGGQGVNT 240 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVRITHLPTGIVVTCQNERSQLQNK RA+QVL ARLQA+AEE+A+ADASADRASQIR Sbjct 241 TDSAVRITHLPTGIVVTCQNERSQLQNKIRAMQVLGARLQAIAEERAMADASADRASQIR 300 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLRQS 357 TVDRSERIRTYNFPENR+TDHRIGYKSHNLDQVLDGDLDALFDAL+AADKQ+RL+QS Sbjct 301 TVDRSERIRTYNFPENRVTDHRIGYKSHNLDQVLDGDLDALFDALAAADKQARLQQS 357 >gi|118464752|ref|YP_880755.1| peptide chain release factor 1 [Mycobacterium avium 104] gi|166223570|sp|A0QCW7.1|RF1_MYCA1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|118166039|gb|ABK66936.1| peptide chain release factor 1 [Mycobacterium avium 104] Length=357 Score = 618 bits (1593), Expect = 6e-175, Method: Compositional matrix adjust. Identities = 316/357 (89%), Positives = 335/357 (94%), Gaps = 0/357 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 MTQPVQTIDVLLAEHA+LE L+DP LHSNP EAR+ GRRFARLAPIV T+RKL +AR+D Sbjct 1 MTQPVQTIDVLLAEHADLERRLSDPDLHSNPDEARKAGRRFARLAPIVGTYRKLMAARED 60 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 LETAREL A D+SF AEVA LE+RV +LD QLTDMLAPRD HDADDIVLEVKSGEGGEES Sbjct 61 LETARELAADDDSFTAEVADLESRVAQLDTQLTDMLAPRDSHDADDIVLEVKSGEGGEES 120 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFAADLARMYIRYAERHGW VTVLDE TSDLGGYKDATL+I SK D+ DGVWSRMKFEG Sbjct 121 ALFAADLARMYIRYAERHGWTVTVLDEITSDLGGYKDATLSIRSKGDSADGVWSRMKFEG 180 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEV +VQIDESDLRIDVFRSSGKGGQGVNT Sbjct 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVAEVQIDESDLRIDVFRSSGKGGQGVNT 240 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVRITHLPTG+VVTCQNERSQLQNK RALQVLAARLQAMAEEQA A+ASADRASQIR Sbjct 241 TDSAVRITHLPTGVVVTCQNERSQLQNKARALQVLAARLQAMAEEQASAEASADRASQIR 300 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLRQS 357 TVDRSERIRTYNFPENRITDHRIG+K+HNLDQVLDGDLDALFDAL+AADKQSRL+Q+ Sbjct 301 TVDRSERIRTYNFPENRITDHRIGFKAHNLDQVLDGDLDALFDALAAADKQSRLQQA 357 >gi|183984069|ref|YP_001852360.1| peptide chain release factor 1 PrfA [Mycobacterium marinum M] gi|238690952|sp|B2HQL3.1|RF1_MYCMM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|183177395|gb|ACC42505.1| peptide chain release factor 1 PrfA [Mycobacterium marinum M] Length=357 Score = 599 bits (1545), Expect = 2e-169, Method: Compositional matrix adjust. Identities = 322/356 (91%), Positives = 337/356 (95%), Gaps = 0/356 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 M PVQTIDVLLAEHA+LE ALADP LHS P EAR+ GRRFARLAPIVAT+RKL +AR+D Sbjct 1 MAAPVQTIDVLLAEHADLERALADPELHSRPDEARKAGRRFARLAPIVATYRKLVAARED 60 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 LETA EL A+DESFAAE A LEARV ELD+QLTDMLAPRDPHDADDIVLEVKSGEGGEES Sbjct 61 LETAHELAATDESFAAEAAELEARVAELDSQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFAADLARMYIRYAERHGW VTVL ETTSDLGGYKDATLAIASK DT DGVWSRMKFEG Sbjct 121 ALFAADLARMYIRYAERHGWTVTVLGETTSDLGGYKDATLAIASKGDTADGVWSRMKFEG 180 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVG+VQIDESDLRIDV+RSSGKGGQGVNT Sbjct 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGEVQIDESDLRIDVYRSSGKGGQGVNT 240 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVRITHLPTGIVVTCQNERSQLQNK RA+QVL ARLQA+AEEQA+ADASADRASQIR Sbjct 241 TDSAVRITHLPTGIVVTCQNERSQLQNKIRAMQVLGARLQAIAEEQAMADASADRASQIR 300 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLRQ 356 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDAL+AADKQ+RL+Q Sbjct 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALAAADKQARLQQ 356 >gi|108800851|ref|YP_641048.1| peptide chain release factor 1 [Mycobacterium sp. MCS] gi|119869991|ref|YP_939943.1| peptide chain release factor 1 [Mycobacterium sp. KMS] gi|126436449|ref|YP_001072140.1| peptide chain release factor 1 [Mycobacterium sp. JLS] 6 more sequence titles Length=357 Score = 592 bits (1525), Expect = 4e-167, Method: Compositional matrix adjust. Identities = 299/357 (84%), Positives = 326/357 (92%), Gaps = 0/357 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 M+ P ID LLAEHA+LE LADPALH++ +AR+ GRRFA+LAPIVAT+RKL +AR D Sbjct 1 MSAPTTAIDALLAEHADLERQLADPALHADAGKARKAGRRFAQLAPIVATYRKLEAARGD 60 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 LE AREL A D SFAAEV LEA V +L+ QL+D+LAPRDPHDADDIVLEVKSGEGGEES Sbjct 61 LEAARELGADDASFAAEVPELEATVDQLETQLSDLLAPRDPHDADDIVLEVKSGEGGEES 120 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFAADLARMYIRYAERHGW+VT+LDETTSDLGGYKDATL+I SK D+ DGVWSR+KFEG Sbjct 121 ALFAADLARMYIRYAERHGWSVTILDETTSDLGGYKDATLSIRSKGDSADGVWSRLKFEG 180 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEV QVQIDESDLRIDV+RSSGKGGQGVNT Sbjct 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVEQVQIDESDLRIDVYRSSGKGGQGVNT 240 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVRITHLPTGIVVTCQNERSQLQNK RA+QVLAARLQ++AEEQA ADASADRASQIR Sbjct 241 TDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQSLAEEQASADASADRASQIR 300 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLRQS 357 TVDRSERIRTYNFPENRI DHRI +K+HNLDQVLDGDLD LFDAL+AADKQ+RL+ S Sbjct 301 TVDRSERIRTYNFPENRIADHRINFKAHNLDQVLDGDLDPLFDALAAADKQARLQSS 357 >gi|226307404|ref|YP_002767364.1| peptide chain release factor 1 [Rhodococcus erythropolis PR4] gi|229489997|ref|ZP_04383850.1| peptide chain release factor 1 [Rhodococcus erythropolis SK121] gi|226186521|dbj|BAH34625.1| peptide chain release factor 1 [Rhodococcus erythropolis PR4] gi|229323098|gb|EEN88866.1| peptide chain release factor 1 [Rhodococcus erythropolis SK121] Length=359 Score = 565 bits (1455), Expect = 5e-159, Method: Compositional matrix adjust. Identities = 281/353 (80%), Positives = 315/353 (90%), Gaps = 1/353 (0%) Query 2 TQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDL 61 TQP ID +LAEHA LE ++DPALH++PA ARRVG+RF+ L+PI++T+ KLT+A+DDL Sbjct 5 TQP-SAIDDILAEHAGLEAQMSDPALHNDPAAARRVGKRFSELSPIMSTYNKLTAAQDDL 63 Query 62 ETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESA 121 E AREL A D SFAAE+ LEA V +L+ LTD LAPRDPHD DDIVLEVKSGEGGEESA Sbjct 64 EAARELAADDSSFAAEIPDLEAEVAQLEQTLTDQLAPRDPHDGDDIVLEVKSGEGGEESA 123 Query 122 LFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGG 181 LFA+DLARMY+RYAERHGW V +LD T SDLGGYK+ATL+I SK+DTPDGVW+R+KFEGG Sbjct 124 LFASDLARMYVRYAERHGWRVEILDATVSDLGGYKEATLSIKSKSDTPDGVWARLKFEGG 183 Query 182 VHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTT 241 VHRVQRVPVTESQGRVHTSAAGVLVYPEPEEV QVQIDESDLRIDV+RSSGKGGQGVNTT Sbjct 184 VHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVEQVQIDESDLRIDVYRSSGKGGQGVNTT 243 Query 242 DSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRT 301 DSAVRITHLPTGIVVTCQNERSQLQNK RA+QVLAARLQ +AEE A A+ASA R SQ+RT Sbjct 244 DSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQVVAEEAADAEASAGRQSQVRT 303 Query 302 VDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 VDRSERIRTYNFPENRITDHRIG+KSHNLD VLDG+LDAL DAL AD+++RL Sbjct 304 VDRSERIRTYNFPENRITDHRIGFKSHNLDAVLDGELDALLDALGKADREARL 356 >gi|120405293|ref|YP_955122.1| peptide chain release factor 1 [Mycobacterium vanbaalenii PYR-1] gi|166223576|sp|A1TD66.1|RF1_MYCVP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119958111|gb|ABM15116.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium vanbaalenii PYR-1] Length=357 Score = 563 bits (1450), Expect = 2e-158, Method: Compositional matrix adjust. Identities = 291/357 (82%), Positives = 322/357 (91%), Gaps = 0/357 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 MT+ I+ +LAE+ ELE LADP LH++PA A++VGRRFA+++PIV+T+ KL +AR D Sbjct 1 MTETAPAIEAILAEYGELEQRLADPELHADPAAAKKVGRRFAQISPIVSTYHKLEAARGD 60 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 LE AREL A D SFAAEV L +V +LD +LTD+LAPRDPHDADDIVLEVKSGEGGEES Sbjct 61 LEAARELAADDASFAAEVDELTTKVADLDDRLTDLLAPRDPHDADDIVLEVKSGEGGEES 120 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFAADLARMYIRYAERHGW VT+L ETTSDLGGYKDATL+IA K D+ DGVWSR+KFEG Sbjct 121 ALFAADLARMYIRYAERHGWTVTMLGETTSDLGGYKDATLSIAGKGDSADGVWSRLKFEG 180 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQRVPVTESQGRVHTSAAGVLVYPEP+EV QVQIDESDLRIDV+RSSGKGGQGVNT Sbjct 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPDEVEQVQIDESDLRIDVYRSSGKGGQGVNT 240 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVRITHLPTGIVVTCQNERSQLQNK RA+QVLAARLQA+AEEQA ADASADRASQIR Sbjct 241 TDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQASADASADRASQIR 300 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLRQS 357 TVDRSERIRTYN+PENRI DHRI YKSHNLDQVLDGDLD LFDAL+AADKQ+RL+ + Sbjct 301 TVDRSERIRTYNYPENRIADHRINYKSHNLDQVLDGDLDPLFDALAAADKQARLQNT 357 >gi|118469567|ref|YP_889202.1| peptide chain release factor 1 [Mycobacterium smegmatis str. MC2 155] gi|118170854|gb|ABK71750.1| peptide chain release factor 1 [Mycobacterium smegmatis str. MC2 155] Length=359 Score = 561 bits (1447), Expect = 4e-158, Method: Compositional matrix adjust. Identities = 294/356 (83%), Positives = 322/356 (91%), Gaps = 0/356 (0%) Query 2 TQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDL 61 T I+ LLAEHA+LE LADPALH++ AR+VGRRFA+++PIVA +RKL +AR DL Sbjct 4 TDTAPAIEALLAEHADLERQLADPALHADAGAARKVGRRFAQVSPIVACYRKLEAARGDL 63 Query 62 ETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESA 121 E AREL A D SFA EV L A+V ELD QLTD+LAPRDPHDADDIVLEVKSGEGGEESA Sbjct 64 EAARELAADDASFADEVEELTAKVAELDNQLTDLLAPRDPHDADDIVLEVKSGEGGEESA 123 Query 122 LFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGG 181 LFAADLARMYIRYAERHGW VT+LDETTSDLGGYKDATL+I S+ D+ DGVW+R+KFEGG Sbjct 124 LFAADLARMYIRYAERHGWTVTLLDETTSDLGGYKDATLSIRSRGDSADGVWARLKFEGG 183 Query 182 VHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTT 241 VHRVQRVPVTESQGRVHTSAAGVLVYPEPEEV +VQIDESDLRIDV+RSSGKGGQGVNTT Sbjct 184 VHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVEEVQIDESDLRIDVYRSSGKGGQGVNTT 243 Query 242 DSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRT 301 DSAVRITHLPTGIVVTCQNERSQLQNK RA+QVLAARLQA+AEEQA ADASADRASQIRT Sbjct 244 DSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQAEADASADRASQIRT 303 Query 302 VDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLRQS 357 VDRSERIRTYNFPENRI DHRI +K+HNLDQVLDGD+DAL DAL+AADKQSRL+Q+ Sbjct 304 VDRSERIRTYNFPENRIADHRINFKAHNLDQVLDGDMDALLDALAAADKQSRLQQA 359 >gi|343928059|ref|ZP_08767524.1| peptide chain release factor 1 [Gordonia alkanivorans NBRC 16433] gi|343762067|dbj|GAA14450.1| peptide chain release factor 1 [Gordonia alkanivorans NBRC 16433] Length=358 Score = 535 bits (1378), Expect = 5e-150, Method: Compositional matrix adjust. Identities = 266/353 (76%), Positives = 303/353 (86%), Gaps = 0/353 (0%) Query 2 TQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDL 61 TQ ID +LAEH+ LE LADP+LH +P ARRVG+RFA LAP+++T+ KL +AR+DL Sbjct 3 TQSPSAIDDILAEHSGLERQLADPSLHDDPTAARRVGKRFAELAPVMSTYNKLKAAREDL 62 Query 62 ETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESA 121 E AREL A D SFAAE+ ALE V ELDA LTD+LAPRDPHD+DD+VLE+KSG GGEESA Sbjct 63 EAARELAADDPSFAAEIPALETTVEELDATLTDLLAPRDPHDSDDVVLEIKSGAGGEESA 122 Query 122 LFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGG 181 LFAADLARMY++Y ERHGW V L T SDLGGYK+AT +I SK DGVWSR+KFEGG Sbjct 123 LFAADLARMYLKYCERHGWKVQTLGVTESDLGGYKEATFSIKSKETVRDGVWSRLKFEGG 182 Query 182 VHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTT 241 VHRVQRVPVTESQGR+HTSAAGVL+YPEPEEV +V IDESDLRIDV+RSSGKGGQGVNTT Sbjct 183 VHRVQRVPVTESQGRIHTSAAGVLIYPEPEEVAEVAIDESDLRIDVYRSSGKGGQGVNTT 242 Query 242 DSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRT 301 DSAVRITHLPTGIVVTCQNERSQLQNK RA+QVLAARLQ+ AEE+A A A+ RA+QIRT Sbjct 243 DSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQSAAEEEAEAAAAEGRAAQIRT 302 Query 302 VDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 VDRSERIRTYNFPENRITDHRIGYK++NLD VL GD+D L DAL AA++Q+R+ Sbjct 303 VDRSERIRTYNFPENRITDHRIGYKANNLDAVLAGDMDNLLDALVAAERQARM 355 >gi|145222895|ref|YP_001133573.1| peptide chain release factor 1 [Mycobacterium gilvum PYR-GCK] gi|315443360|ref|YP_004076239.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp. Spyr1] gi|189039980|sp|A4T8L3.1|RF1_MYCGI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|145215381|gb|ABP44785.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium gilvum PYR-GCK] gi|315261663|gb|ADT98404.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp. Spyr1] Length=357 Score = 533 bits (1372), Expect = 2e-149, Method: Compositional matrix adjust. Identities = 285/346 (83%), Positives = 315/346 (92%), Gaps = 0/346 (0%) Query 12 LAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLETARELVASD 71 LAE+ ELE LADP LH++ AR+VGRRFA+++PIVAT+RKL +AR DLE AREL A D Sbjct 12 LAEYGELEQRLADPDLHADAGAARKVGRRFAQISPIVATYRKLEAARGDLEAARELAADD 71 Query 72 ESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFAADLARMY 131 SFAAEV L ++G+LD LTD+LAPRDPHDADDIVLEVKSGEGGEESALFAADLARMY Sbjct 72 ASFAAEVDELTDQIGDLDRALTDLLAPRDPHDADDIVLEVKSGEGGEESALFAADLARMY 131 Query 132 IRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGGVHRVQRVPVT 191 IRYAERHGW VT+L ETTSDLGGYKDATL+IASK D+ DGVW+R+KFEGGVHRVQRVPVT Sbjct 132 IRYAERHGWTVTMLGETTSDLGGYKDATLSIASKGDSADGVWARLKFEGGVHRVQRVPVT 191 Query 192 ESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLP 251 ESQGRVHTSAAGVLVYPEP+EV QVQIDESDLR+DV+RSSGKGGQGVNTTDSAVRITHLP Sbjct 192 ESQGRVHTSAAGVLVYPEPDEVEQVQIDESDLRVDVYRSSGKGGQGVNTTDSAVRITHLP 251 Query 252 TGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDRSERIRTY 311 TGIVVTCQNERSQLQNK RA+QVLAARLQA+AEEQA ADASADRASQIRTVDRSERIRTY Sbjct 252 TGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQASADASADRASQIRTVDRSERIRTY 311 Query 312 NFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLRQS 357 NFPENRI DHRI +K+HNLDQVLDGDLD L DAL+AAD+Q+RL+ + Sbjct 312 NFPENRIADHRINFKAHNLDQVLDGDLDPLLDALAAADRQARLQNT 357 >gi|111018484|ref|YP_701456.1| peptide chain release factor 1 [Rhodococcus jostii RHA1] gi|119361595|sp|Q0SGN8.1|RF1_RHOSR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|110818014|gb|ABG93298.1| peptide chain release factor RF1 [Rhodococcus jostii RHA1] Length=359 Score = 527 bits (1358), Expect = 9e-148, Method: Compositional matrix adjust. Identities = 280/353 (80%), Positives = 312/353 (89%), Gaps = 1/353 (0%) Query 2 TQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDL 61 TQP ID +LAEHA LE LADPALH++P+ AR+ G+RFA LAPI+AT+ KL SA+DDL Sbjct 5 TQP-SAIDDILAEHAGLEQQLADPALHNDPSAARKAGKRFAELAPIMATYAKLKSAQDDL 63 Query 62 ETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESA 121 + AREL A D SFAAEV LEA+V ELD LTD+LAPRDPHD DD+VLEVKSGEGGEESA Sbjct 64 DAARELAADDSSFAAEVPELEAQVLELDKALTDLLAPRDPHDGDDVVLEVKSGEGGEESA 123 Query 122 LFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGG 181 LFA+DLARMY+RYAERHGW V +LD T SDLGGYKDATL+I SK D DGVW+R+KFEGG Sbjct 124 LFASDLARMYVRYAERHGWRVEILDATVSDLGGYKDATLSIKSKGDVRDGVWARLKFEGG 183 Query 182 VHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTT 241 VHRVQRVPVTESQGRVHTSAAGVL+YPEPEEV +VQIDE+DLRIDV+RSSGKGGQGVNTT Sbjct 184 VHRVQRVPVTESQGRVHTSAAGVLIYPEPEEVEEVQIDETDLRIDVYRSSGKGGQGVNTT 243 Query 242 DSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRT 301 DSAVRITHLPTGIVVTCQNERSQLQNK RA+QVLAARLQA AEE A A+ASA R SQ+RT Sbjct 244 DSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEAADAEASAGRQSQVRT 303 Query 302 VDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 VDRSERIRTYNFPENRITDHRIG+KSHNLD VLDG+LDAL DAL +D+++RL Sbjct 304 VDRSERIRTYNFPENRITDHRIGFKSHNLDAVLDGELDALLDALGKSDREARL 356 >gi|333920929|ref|YP_004494510.1| peptide chain release factor 1 [Amycolicicoccus subflavus DQS3-9A1] gi|333483150|gb|AEF41710.1| Peptide chain release factor 1 [Amycolicicoccus subflavus DQS3-9A1] Length=356 Score = 526 bits (1354), Expect = 3e-147, Method: Compositional matrix adjust. Identities = 262/354 (75%), Positives = 305/354 (87%), Gaps = 1/354 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 M P ID LLAE++ LE LADP LH++PA AR+ G+RFA+L+PI+AT+RKL +AR+D Sbjct 1 MDSP-SAIDDLLAEYSGLEQQLADPELHADPAAARKAGKRFAQLSPIMATYRKLKTARED 59 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 L A+EL D SFA +VAALE V EL+ LTD+LAPRDPHD DD+VLEVKSGEGGEES Sbjct 60 LVVAKELAEDDASFAGDVAALETEVSELNLTLTDLLAPRDPHDGDDVVLEVKSGEGGEES 119 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFAADLARMY+RYAER GW VLD SDLGGYKDAT+++ S+ D PDGVW+R+KFEG Sbjct 120 ALFAADLARMYLRYAERRGWKAEVLDSVISDLGGYKDATISLKSREDGPDGVWARLKFEG 179 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQRVPVTESQGR+HTSAAGV V+PE EE +VQID++DLRIDVFRSSGKGGQGVNT Sbjct 180 GVHRVQRVPVTESQGRIHTSAAGVYVFPESEEAEEVQIDDNDLRIDVFRSSGKGGQGVNT 239 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVRITHLPTGIVV+CQNERSQLQNK RA+QVLAARLQA+AE++A A+ASA R SQ+R Sbjct 240 TDSAVRITHLPTGIVVSCQNERSQLQNKARAMQVLAARLQAIAEDEAEAEASAGRRSQVR 299 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 TVDRSERIRTYNFPENRI DHRIG+K+HNLD VL G+LDA+ DAL+ AD+Q+RL Sbjct 300 TVDRSERIRTYNFPENRIADHRIGFKAHNLDAVLGGELDAMLDALAEADRQARL 353 >gi|226360607|ref|YP_002778385.1| peptide chain release factor 1 [Rhodococcus opacus B4] gi|226239092|dbj|BAH49440.1| peptide chain release factor 1 [Rhodococcus opacus B4] Length=359 Score = 523 bits (1347), Expect = 2e-146, Method: Compositional matrix adjust. Identities = 278/353 (79%), Positives = 311/353 (89%), Gaps = 1/353 (0%) Query 2 TQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDL 61 TQP ID +LAEHA LE LADPALH++ + AR+ G+RFA LAPI+AT+ +L SA+DDL Sbjct 5 TQP-SAIDDILAEHAGLEQQLADPALHNDASAARKAGKRFAELAPIMATYTRLKSAQDDL 63 Query 62 ETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESA 121 + AREL A D SFAAEV ALE +V ELD LTD+LAPRDPHD DD+VLEVKSGEGGEESA Sbjct 64 DAARELAADDSSFAAEVPALEEQVLELDKTLTDLLAPRDPHDGDDVVLEVKSGEGGEESA 123 Query 122 LFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGG 181 LFA+DLARMY+RYAERHGW V +LD T SDLGGYKDATL+I SK D DGVW+R+KFEGG Sbjct 124 LFASDLARMYVRYAERHGWRVEILDATVSDLGGYKDATLSIKSKGDVRDGVWARLKFEGG 183 Query 182 VHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTT 241 VHRVQRVPVTESQGRVHTSAAGVL+YPEPEEV +VQIDE+DLRIDV+RSSGKGGQGVNTT Sbjct 184 VHRVQRVPVTESQGRVHTSAAGVLIYPEPEEVEEVQIDETDLRIDVYRSSGKGGQGVNTT 243 Query 242 DSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRT 301 DSAVRITHLPTGIVVTCQNERSQLQNK RA+QVLAARLQA AEE A A+ASA R SQ+RT Sbjct 244 DSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEAADAEASAGRQSQVRT 303 Query 302 VDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 VDRSERIRTYNFPENRITDHRIG+KSHNLD VLDG+LDAL DAL +D+++RL Sbjct 304 VDRSERIRTYNFPENRITDHRIGFKSHNLDAVLDGELDALLDALGKSDREARL 356 >gi|169628533|ref|YP_001702182.1| peptide chain release factor 1 [Mycobacterium abscessus ATCC 19977] gi|238688924|sp|B1MLV1.1|RF1_MYCA9 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|169240500|emb|CAM61528.1| Probable peptide chain release factor 1 (RF-1) [Mycobacterium abscessus] Length=356 Score = 521 bits (1343), Expect = 5e-146, Method: Compositional matrix adjust. Identities = 295/350 (85%), Positives = 323/350 (93%), Gaps = 0/350 (0%) Query 8 IDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLETAREL 67 ID +LAEHAELE LADPALH++ A AR+ GRRFA L+PIVATHRKL +ARDDL TAREL Sbjct 7 IDAMLAEHAELEKQLADPALHADAAAARKAGRRFAMLSPIVATHRKLATARDDLATAREL 66 Query 68 VASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFAADL 127 A D SFA EV LE+ + EL+ QL+DMLAPRDPHD DDI+LEVKSGEGGEESALFAADL Sbjct 67 SADDPSFADEVTELESSIAELETQLSDMLAPRDPHDGDDILLEVKSGEGGEESALFAADL 126 Query 128 ARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGGVHRVQR 187 ARMYIRYAERHGW VTVLDET SDLGGYKDATLAIASK D+ DGVWSR+KFEGGVHRVQR Sbjct 127 ARMYIRYAERHGWKVTVLDETESDLGGYKDATLAIASKGDSADGVWSRLKFEGGVHRVQR 186 Query 188 VPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSAVRI 247 VPVTESQGRVHTSAAGVLVYPEPEEV ++QIDESDLRIDV+RSSGKGGQGVNTTDSAVRI Sbjct 187 VPVTESQGRVHTSAAGVLVYPEPEEVEEIQIDESDLRIDVYRSSGKGGQGVNTTDSAVRI 246 Query 248 THLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDRSER 307 THLPTGIVVTCQNERSQLQNK RA+QVLAARLQA+AEEQA ADASA RASQIRTVDRSER Sbjct 247 THLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQAQADASAGRASQIRTVDRSER 306 Query 308 IRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLRQS 357 IRTYNFPENRITDHR+G+K+HNLDQVLDGDLDALFDAL+AAD+++RL+++ Sbjct 307 IRTYNFPENRITDHRVGFKAHNLDQVLDGDLDALFDALAAADRKARLQEA 356 >gi|54023021|ref|YP_117263.1| peptide chain release factor 1 [Nocardia farcinica IFM 10152] gi|61214587|sp|Q5Z0Z2.1|RF1_NOCFA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|54014529|dbj|BAD55899.1| putative peptide chain release factor 1 [Nocardia farcinica IFM 10152] Length=356 Score = 520 bits (1340), Expect = 1e-145, Method: Compositional matrix adjust. Identities = 281/354 (80%), Positives = 309/354 (88%), Gaps = 1/354 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 MTQP ID +LAEHA LE LADP LH++P+ ARRVG+RFA LAPI+AT+RKL SAR D Sbjct 1 MTQP-SAIDDILAEHAGLETQLADPTLHNDPSAARRVGKRFAELAPIMATYRKLESARAD 59 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 L AREL A D SFAAEV LE +V EL+ L D+LAPRDPHD DD+VLEVKSGEGGEES Sbjct 60 LTAARELAADDASFAAEVPELERQVDELEQALADLLAPRDPHDGDDVVLEVKSGEGGEES 119 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFAADLARMY+RYAER GW V VLD T SDLGGYK+ATL+I S+ DGVWSR KFEG Sbjct 120 ALFAADLARMYMRYAERRGWRVEVLDATVSDLGGYKEATLSIKSRDAARDGVWSRFKFEG 179 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQRVPVTESQGR+HTSAAGVL+YPEP+EV +VQIDESDLRIDV+RSSGKGGQGVNT Sbjct 180 GVHRVQRVPVTESQGRIHTSAAGVLIYPEPDEVAEVQIDESDLRIDVYRSSGKGGQGVNT 239 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVRITHLPTGIVVTCQNERSQLQNK RA+QVLAARLQA+AEEQA +A+A RASQIR Sbjct 240 TDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQAEQEAAAGRASQIR 299 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 TVDRSERIRTYNFPENRITDHRIGYKSHNLD VLDGDLDAL DAL AD+++R+ Sbjct 300 TVDRSERIRTYNFPENRITDHRIGYKSHNLDAVLDGDLDALLDALGKADREARM 353 >gi|326382082|ref|ZP_08203775.1| peptide chain release factor 1 [Gordonia neofelifaecis NRRL B-59395] gi|326199508|gb|EGD56689.1| peptide chain release factor 1 [Gordonia neofelifaecis NRRL B-59395] Length=364 Score = 514 bits (1323), Expect = 1e-143, Method: Compositional matrix adjust. Identities = 268/355 (76%), Positives = 308/355 (87%), Gaps = 0/355 (0%) Query 2 TQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDL 61 TQ ID +LAEHA L+ L+DPALH +PA ARRVG+RFA LAP++ T+ KLT+ARDDL Sbjct 10 TQEPSAIDDILAEHAGLQAQLSDPALHDDPANARRVGKRFAELAPVMTTYTKLTAARDDL 69 Query 62 ETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESA 121 E AREL +D +FA E+ ALEA V ELDA LTD+LAPRDPHD+DD+VLEVKSG GGEESA Sbjct 70 EAARELAEADAAFAEEIPALEATVTELDATLTDLLAPRDPHDSDDVVLEVKSGAGGEESA 129 Query 122 LFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGG 181 LFA+DL RMY++Y ERHGW TVL T SDLGGYK+ATL+I ++ DGVWSR+KFEGG Sbjct 130 LFASDLVRMYLKYCERHGWKATVLGATESDLGGYKEATLSIKARETVRDGVWSRLKFEGG 189 Query 182 VHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTT 241 VHRVQRVPVTESQGR+HTSAAGVL+YPEP+EV ++QIDESDLRIDV+RSSGKGGQGVNTT Sbjct 190 VHRVQRVPVTESQGRIHTSAAGVLIYPEPDEVEEIQIDESDLRIDVYRSSGKGGQGVNTT 249 Query 242 DSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRT 301 DSAVRITHLPT IVVTCQNERSQLQNK RA+QVLAARL+A AEE+A A+ASA R +QIRT Sbjct 250 DSAVRITHLPTNIVVTCQNERSQLQNKARAMQVLAARLKAAAEEEAEAEASAGRQAQIRT 309 Query 302 VDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLRQ 356 VDRSERIRTYNFPENRITDHRIGYK++NLD VL G++DAL DAL ADKQ+RL+Q Sbjct 310 VDRSERIRTYNFPENRITDHRIGYKANNLDSVLGGEMDALLDALVEADKQARLQQ 364 >gi|296138963|ref|YP_003646206.1| peptide chain release factor 1 [Tsukamurella paurometabola DSM 20162] gi|296027097|gb|ADG77867.1| peptide chain release factor 1 [Tsukamurella paurometabola DSM 20162] Length=362 Score = 513 bits (1321), Expect = 2e-143, Method: Compositional matrix adjust. Identities = 261/351 (75%), Positives = 298/351 (85%), Gaps = 4/351 (1%) Query 8 IDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLETAREL 67 ID +LAE++ LE ++DPALH++ + AR+VG+RFA LAPI+ATHRKL +AR+D A+EL Sbjct 9 IDDILAEYSGLEQQMSDPALHNDASAARKVGKRFAELAPIMATHRKLEAAREDRAAAQEL 68 Query 68 VASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFAADL 127 A D SFA EV L ++ L+ QLTD+LAPRDPHD+DD+VLEVKSGEGGEESALFA DL Sbjct 69 AADDSSFADEVTVLTEQIDALEQQLTDLLAPRDPHDSDDVVLEVKSGEGGEESALFAGDL 128 Query 128 ARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDG----VWSRMKFEGGVH 183 ARMY+RYAE+ GW V L T SDLGGYKDAT AI S+ DG VW+RMKFEGGVH Sbjct 129 ARMYLRYAEQRGWKVETLGATYSDLGGYKDATFAIKSRGPGADGAIDGVWARMKFEGGVH 188 Query 184 RVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTTDS 243 RVQRVP TESQGR+HTSAAGVLVYPEP+EV +VQIDESDLRIDV+RSSGKGGQGVNTTDS Sbjct 189 RVQRVPATESQGRIHTSAAGVLVYPEPDEVEEVQIDESDLRIDVYRSSGKGGQGVNTTDS 248 Query 244 AVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVD 303 AVRITHLPT IVVTCQNERSQLQNK RA+QVLAARLQA+ EE+A A AS RA+QIRTVD Sbjct 249 AVRITHLPTNIVVTCQNERSQLQNKARAMQVLAARLQALREEEAEAAASDSRAAQIRTVD 308 Query 304 RSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 RSERIRTYNFPENRI DHRIG+K+HNLDQVLDG+LD L DAL AAD+Q+RL Sbjct 309 RSERIRTYNFPENRIADHRIGFKAHNLDQVLDGELDPLLDALQAADRQARL 359 >gi|312139166|ref|YP_004006502.1| peptide chain release factor 1 prfa [Rhodococcus equi 103S] gi|325673529|ref|ZP_08153220.1| peptide chain release factor RF1 [Rhodococcus equi ATCC 33707] gi|311888505|emb|CBH47817.1| peptide chain release factor 1 PrfA [Rhodococcus equi 103S] gi|325555550|gb|EGD25221.1| peptide chain release factor RF1 [Rhodococcus equi ATCC 33707] Length=359 Score = 507 bits (1306), Expect = 1e-141, Method: Compositional matrix adjust. Identities = 274/353 (78%), Positives = 310/353 (88%), Gaps = 1/353 (0%) Query 2 TQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDL 61 TQP ID +LAEHA LE LADPALH++P+ AR+ G+RFA LAP++AT+ KL SA+DDL Sbjct 5 TQP-SAIDDILAEHAGLEQQLADPALHNDPSAARKAGKRFAELAPVMATYAKLKSAQDDL 63 Query 62 ETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESA 121 + AREL A D +FAAE+ ALE V ELD LTD+LAPRDPHD DD+VLE+KSGEGGEESA Sbjct 64 DAARELAADDAAFAAEIPALEETVTELDKTLTDLLAPRDPHDGDDVVLELKSGEGGEESA 123 Query 122 LFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGG 181 LFA+DLARMY+RYAER GW V +LD T SDLGGYKDAT++I SK D DGVWSR+KFEGG Sbjct 124 LFASDLARMYVRYAERAGWRVEILDATVSDLGGYKDATISIKSKGDVRDGVWSRLKFEGG 183 Query 182 VHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTT 241 VHRVQRVPVTESQGRVHTSAAGVL+YPEPEEV +VQIDE+DLRIDV+RSSGKGGQGVNTT Sbjct 184 VHRVQRVPVTESQGRVHTSAAGVLIYPEPEEVEEVQIDETDLRIDVYRSSGKGGQGVNTT 243 Query 242 DSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRT 301 DSAVRITHLPTGIVVTCQNERSQLQNK RA+QVLAARLQA AEE A A+ASA R SQ+RT Sbjct 244 DSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEAADAEASAGRQSQVRT 303 Query 302 VDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 VDRSERIRTYNFPENRITDHRIG+K+HNLD VLDGD++AL DAL AD+++RL Sbjct 304 VDRSERIRTYNFPENRITDHRIGFKAHNLDAVLDGDMEALLDALGKADREARL 356 >gi|319948468|ref|ZP_08022604.1| peptide chain release factor 1 [Dietzia cinnamea P4] gi|319437888|gb|EFV92872.1| peptide chain release factor 1 [Dietzia cinnamea P4] Length=361 Score = 498 bits (1282), Expect = 5e-139, Method: Compositional matrix adjust. Identities = 257/351 (74%), Positives = 295/351 (85%), Gaps = 0/351 (0%) Query 7 TIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLETARE 66 +ID +L+E+ LE L+DP LH + A ARRVG+RFA L PIV HR L S RDD ARE Sbjct 11 SIDDVLSEYGGLEAQLSDPTLHEDAAAARRVGKRFAELTPIVQCHRALVSTRDDAAAARE 70 Query 67 LVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFAAD 126 L D SFA E L+A EL+A+L D+LAPRDPHDADD+V+E+KSGEGGEESALFAAD Sbjct 71 LAGDDPSFAEEADRLDAEAAELEARLADLLAPRDPHDADDVVMEIKSGEGGEESALFAAD 130 Query 127 LARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGGVHRVQ 186 LARMY RYAE+HGW V VL T SDLGGYKDA+ +I S+ + DGVWSR+KFEGGVHRVQ Sbjct 131 LARMYTRYAEKHGWIVEVLGVTESDLGGYKDASFSIRSRQPSRDGVWSRLKFEGGVHRVQ 190 Query 187 RVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSAVR 246 RVPVTESQGRVHTSAAGVLV+PEPE+VG V+IDESDLRIDV+RSSGKGGQGVNTTDSAVR Sbjct 191 RVPVTESQGRVHTSAAGVLVFPEPEDVGPVEIDESDLRIDVYRSSGKGGQGVNTTDSAVR 250 Query 247 ITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDRSE 306 ITHLPTG VVTCQNERSQLQNK RALQVLAARLQA AEE A A+A+ RASQ+RTVDRSE Sbjct 251 ITHLPTGTVVTCQNERSQLQNKQRALQVLAARLQAAAEEAAGAEAAEGRASQVRTVDRSE 310 Query 307 RIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLRQS 357 RIRTYN+PENRI DHR+G+K+HNLD VLDGDLDA+ DAL+A +++ R+ Q+ Sbjct 311 RIRTYNYPENRIADHRVGFKAHNLDAVLDGDLDAVLDALAAEERRRRMEQA 361 >gi|262201848|ref|YP_003273056.1| peptide chain release factor 1 [Gordonia bronchialis DSM 43247] gi|262085195|gb|ACY21163.1| peptide chain release factor 1 [Gordonia bronchialis DSM 43247] Length=364 Score = 498 bits (1281), Expect = 8e-139, Method: Compositional matrix adjust. Identities = 266/353 (76%), Positives = 301/353 (86%), Gaps = 0/353 (0%) Query 2 TQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDL 61 T ID +LAEHA LE L+DPALH +PA ARRVG+RFA LAP++ATH +L +ARDDL Sbjct 9 TSSPSAIDDILAEHAGLEQQLSDPALHDDPAAARRVGKRFAELAPVMATHARLVAARDDL 68 Query 62 ETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESA 121 AREL A D +FA E+ ALE+ V ELDA LTD+LAPRDPHD DD+VLE+KSG GGEESA Sbjct 69 AAARELAADDPAFAEEIPALESTVAELDATLTDLLAPRDPHDGDDVVLEIKSGAGGEESA 128 Query 122 LFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGG 181 LFAADLARMY++Y ERHGW VL T SDLGGYK+ATL+I +K +GVWSR+KFEGG Sbjct 129 LFAADLARMYLKYCERHGWKAQVLGVTESDLGGYKEATLSIKAKEAVREGVWSRLKFEGG 188 Query 182 VHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTT 241 VHRVQRVPVTESQGR+HTSAAGVL+YPEPEE+ QV IDESDLRIDV+RSSGKGGQGVNTT Sbjct 189 VHRVQRVPVTESQGRIHTSAAGVLIYPEPEELEQVAIDESDLRIDVYRSSGKGGQGVNTT 248 Query 242 DSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRT 301 DSAVRITHLPTGIVVTCQNERSQLQNK RA+QVLAARLQA AEE+A A A+ RA+QIRT Sbjct 249 DSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEEAQAAAAQGRAAQIRT 308 Query 302 VDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 VDRSERIRTYNFPENRI DHRIGYK++NLD VL G++D L DAL AAD+Q+RL Sbjct 309 VDRSERIRTYNFPENRIADHRIGYKANNLDAVLGGEMDGLLDALVAADRQARL 361 >gi|256380143|ref|YP_003103803.1| peptide chain release factor 1 [Actinosynnema mirum DSM 43827] gi|255924446|gb|ACU39957.1| peptide chain release factor 1 [Actinosynnema mirum DSM 43827] Length=354 Score = 496 bits (1278), Expect = 2e-138, Method: Compositional matrix adjust. Identities = 242/354 (69%), Positives = 292/354 (83%), Gaps = 3/354 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 MT P +D L+AEH ELE LADP++H++ A AR++G+R+A L PIV R+L R+D Sbjct 1 MTAP---LDALIAEHGELETKLADPSVHADQAGARKLGKRYAELTPIVRAARELEQTRND 57 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 L AREL D +FA E L AR+ +L+ +LT++L PRDPHD+ D+V+E+KSGEGGEES Sbjct 58 LGAARELAGEDPAFAEEADELSARIPQLEERLTELLLPRDPHDSSDVVMEIKSGEGGEES 117 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFA DL RMY+RYAER GW VLD T SDLGG+KD T+AI S+ D PDGVWSR+K+EG Sbjct 118 ALFAGDLLRMYLRYAERQGWKAEVLDGTDSDLGGFKDVTVAIKSRGDGPDGVWSRLKYEG 177 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQRVPVTESQGR+HTSAAGVLV PE E+V ++ID+ DLR+DVFRSSGKGGQ VNT Sbjct 178 GVHRVQRVPVTESQGRIHTSAAGVLVIPETEDVASIEIDDKDLRVDVFRSSGKGGQSVNT 237 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVRITHLPTGIVV+CQNERSQLQNK RA+QVL ARLQA+AEE+A +AS R +Q+R Sbjct 238 TDSAVRITHLPTGIVVSCQNERSQLQNKARAMQVLQARLQALAEEKAQQEASDARRTQVR 297 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 TVDRSER+RTYNFPE+RI+DHR+GYK+HNLD VLDG+LDA+ DALSAAD+ RL Sbjct 298 TVDRSERVRTYNFPESRISDHRVGYKAHNLDAVLDGELDAVLDALSAADRAERL 351 >gi|336325979|ref|YP_004605945.1| peptide chain release factor RF-1 [Corynebacterium resistens DSM 45100] gi|336101961|gb|AEI09781.1| peptide chain release factor RF-1 [Corynebacterium resistens DSM 45100] Length=359 Score = 480 bits (1235), Expect = 2e-133, Method: Compositional matrix adjust. Identities = 236/354 (67%), Positives = 285/354 (81%), Gaps = 0/354 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 M+ +D +LAE+ LE L DP LH++PA AR+VG+RF+ L PI+ TH++L AR+D Sbjct 1 MSNSPSMVDDILAEYQGLEAQLGDPELHNDPAAARKVGKRFSELQPIIQTHQQLEQARED 60 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 E A E+ + D FA E LE + EL+ +LTD+LAPRDPHD DDIV+E+KSG GGEE+ Sbjct 61 HEAAAEMASEDAEFAEEAKRLETEIAELEEKLTDLLAPRDPHDGDDIVMEIKSGAGGEEA 120 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFA +LARMY RYAERHG+A VLD +DLGG KD T++I SK + DG W+ KFEG Sbjct 121 ALFAGELARMYQRYAERHGFATEVLDLNETDLGGVKDMTMSIRSKQPSRDGAWAEFKFEG 180 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQR+PVTESQGR+ TSAAGVLVYPEP+EV VQIDE DLRIDV+RSSGKGGQGVNT Sbjct 181 GVHRVQRIPVTESQGRIQTSAAGVLVYPEPDEVEDVQIDEKDLRIDVYRSSGKGGQGVNT 240 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVRITHLPTG+VVTCQ ERSQ+QNK RA+QVLAARLQ M EE+A A+A+ RA+QIR Sbjct 241 TDSAVRITHLPTGVVVTCQKERSQIQNKARAMQVLAARLQQMEEEKAEAEAAEGRAAQIR 300 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 T+DRSERIRTYNFPE+R++DHRIGYK++NLD VL GDL++LF AL AD+ RL Sbjct 301 TMDRSERIRTYNFPESRVSDHRIGYKANNLDAVLGGDLESLFAALKDADRARRL 354 >gi|331695519|ref|YP_004331758.1| peptide chain release factor 1 [Pseudonocardia dioxanivorans CB1190] gi|326950208|gb|AEA23905.1| Peptide chain release factor 1 [Pseudonocardia dioxanivorans CB1190] Length=366 Score = 477 bits (1227), Expect = 2e-132, Method: Compositional matrix adjust. Identities = 242/351 (69%), Positives = 287/351 (82%), Gaps = 3/351 (0%) Query 2 TQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDL 61 T QT D LLAEHA+LEL LADPA+H++PA ARR+GRR+A + P+VA ++L S RDDL Sbjct 6 TTAPQTADALLAEHADLELMLADPAVHADPARARRLGRRYAEIGPVVAVAKELASVRDDL 65 Query 62 ETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESA 121 AREL A D +F AE L ARV L+A+L ++L PRDPHDADD+VLEVKSGEGGEESA Sbjct 66 AAARELAADDPTFGAEADDLAARVPALEARLAELLVPRDPHDADDVVLEVKSGEGGEESA 125 Query 122 LFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGG 181 LFA DL RMY R+AE GW+ +LD TTSDLGGYKD TL++ ++ DGVWS +KFEGG Sbjct 126 LFAGDLVRMYTRFAESRGWSTEILDATTSDLGGYKDVTLSVRARVPAADGVWSALKFEGG 185 Query 182 VHRVQRVPVTESQGRVHTSAAGVLVYPE--PEEVGQVQIDESDLRIDVFRSSGKGGQGVN 239 VHRVQRVPVTESQGR+HTSAAGVLVYP+ ++ G ++ID++DLR+DVFRSSG GGQ VN Sbjct 186 VHRVQRVPVTESQGRIHTSAAGVLVYPDTGADDAG-IEIDDNDLRVDVFRSSGHGGQSVN 244 Query 240 TTDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQI 299 TTDSAVRITHLPTGIVV+CQNERSQLQN+ RA++VL +RLQA+AEE+A A AS R SQ+ Sbjct 245 TTDSAVRITHLPTGIVVSCQNERSQLQNRARAMEVLRSRLQALAEEEAAARASDARRSQV 304 Query 300 RTVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADK 350 RTVDRSERIRTYNFPENRI DHR+GYK+HNL VLDGDL + AL AAD+ Sbjct 305 RTVDRSERIRTYNFPENRIADHRVGYKAHNLSAVLDGDLGDVIAALVAADR 355 >gi|227487967|ref|ZP_03918283.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum ATCC 51867] gi|227542608|ref|ZP_03972657.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum ATCC 51866] gi|227092058|gb|EEI27370.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum ATCC 51867] gi|227181806|gb|EEI62778.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum ATCC 51866] Length=358 Score = 470 bits (1210), Expect = 1e-130, Method: Compositional matrix adjust. Identities = 229/354 (65%), Positives = 282/354 (80%), Gaps = 0/354 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 M V +D +LAE+ LE +ADP ++P R+ G+R+++L PIV + +L AR D Sbjct 1 MASHVSAVDDILAEYQGLEAQMADPEFANDPDNVRKAGKRYSQLQPIVNLNTQLEQARAD 60 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 L A+EL D +F AEV LE +V EL+ +L DMLAPRDPHD DD+V+E+K+G GGEE+ Sbjct 61 LADAKELAYEDSAFTAEVERLEPKVVELEEKLADMLAPRDPHDPDDMVMEIKAGAGGEEA 120 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFA +L RMY RYAE+HG+ VLDE+ SDLGG KD TL+I SK + DG WS KFEG Sbjct 121 ALFAGELVRMYQRYAEKHGFITEVLDESESDLGGVKDMTLSIRSKNPSQDGAWSVFKFEG 180 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQR+PVTES GR+ TSAAGVLVYPEP+EVGQV+IDE D+R+DV+RSSGKGGQGVNT Sbjct 181 GVHRVQRIPVTESNGRIQTSAAGVLVYPEPDEVGQVEIDEKDIRVDVYRSSGKGGQGVNT 240 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVR+THLPTGI+VTCQ ERSQ+QNK RA+QVL ARLQ + EE+A A+A+ R +Q+R Sbjct 241 TDSAVRLTHLPTGIIVTCQKERSQIQNKARAMQVLQARLQQIEEEKAEAEAAEGRHAQVR 300 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 T+DRSERIRTYN+PENRITDHRIGYK++NLD VLDGD+DAL AL AD+Q+RL Sbjct 301 TMDRSERIRTYNWPENRITDHRIGYKANNLDSVLDGDMDALLMALQDADRQARL 354 >gi|334564797|ref|ZP_08517788.1| peptide chain release factor 1 [Corynebacterium bovis DSM 20582] Length=360 Score = 468 bits (1205), Expect = 6e-130, Method: Compositional matrix adjust. Identities = 233/347 (68%), Positives = 278/347 (81%), Gaps = 0/347 (0%) Query 8 IDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLETAREL 67 +D +LAE+ LE L+DP LH++PA ARRVG+RF+ L P++ T +L A+DD E ARE+ Sbjct 10 VDDILAEYQGLEAQLSDPDLHNDPAAARRVGKRFSELQPVIQTWNRLAEAKDDHEAAREM 69 Query 68 VASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFAADL 127 D FA E L + EL+ +L D+L PRDPHD DDIV+EVKSG GGEE+ALFA +L Sbjct 70 AREDAEFAEEADRLGTEIAELEEKLADLLTPRDPHDGDDIVMEVKSGAGGEEAALFAGEL 129 Query 128 ARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGGVHRVQR 187 ARMY RYAERHG+ V VLD SDLGG KD TL+I +K + DG WS KFEGGVHRVQR Sbjct 130 ARMYQRYAERHGFTVEVLDLAESDLGGVKDMTLSIRAKQPSRDGAWSVFKFEGGVHRVQR 189 Query 188 VPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSAVRI 247 VPVTESQGR+ TSAAGVLVYPEP+E+ V+ID+ D+R+DV+RSSGKGGQGVNTTDSAVRI Sbjct 190 VPVTESQGRIQTSAAGVLVYPEPDEIEDVEIDDKDIRVDVYRSSGKGGQGVNTTDSAVRI 249 Query 248 THLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDRSER 307 THLPTGIVVTCQ ERSQ+QNK RA+QVLAARLQ M EE A +A+ RA+QIRT+DRSER Sbjct 250 THLPTGIVVTCQKERSQIQNKARAMQVLAARLQQMREEAAEQEAAEGRAAQIRTMDRSER 309 Query 308 IRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 IRTYNFPE+R++DHRIGYK++NLD VL GDLDALF AL A++ SRL Sbjct 310 IRTYNFPESRVSDHRIGYKANNLDAVLGGDLDALFTALREAERASRL 356 >gi|213964464|ref|ZP_03392664.1| peptide chain release factor 1 [Corynebacterium amycolatum SK46] gi|213952657|gb|EEB64039.1| peptide chain release factor 1 [Corynebacterium amycolatum SK46] Length=357 Score = 468 bits (1204), Expect = 7e-130, Method: Compositional matrix adjust. Identities = 230/354 (65%), Positives = 277/354 (79%), Gaps = 0/354 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 M V +D +L+E+ LE LADP LH++P AR+VG+RF L P++ TH+KLT +DD Sbjct 1 MANQVSAVDDILSEYHGLEAQLADPELHNDPKAARKVGKRFNELQPVIQTHKKLTEVQDD 60 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 LE ARE+ D FAAE L A EL+ +L D+LAPRDPHD+DDIV+E+KSG GGEE+ Sbjct 61 LEAAREMAYEDSEFAAEAERLAAEAEELEEKLADLLAPRDPHDSDDIVMELKSGAGGEEA 120 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFA +LARMY RYAE+HG+ +L + SDLGG KD T++I +K + DG WS KFEG Sbjct 121 ALFAGELARMYQRYAEKHGFTTEILGLSESDLGGVKDMTMSIRAKTPSRDGAWSVFKFEG 180 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQRVPVTESQGR+ TSAAGVLVYPEP+EV +QIDE DLR+DV+RSSGKGGQGVNT Sbjct 181 GVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVEDIQIDEKDLRVDVYRSSGKGGQGVNT 240 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVR+THLPTG+VVTCQ ERSQ+QNK RA+QVLAARLQ M EE+ AS R SQ+R Sbjct 241 TDSAVRLTHLPTGLVVTCQKERSQIQNKARAMQVLAARLQQMKEEEIAEAASDQRKSQVR 300 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 +DRSERIRTYNFPENR++DHRIGYK+HNLD VL GD+D L AL A++ RL Sbjct 301 NMDRSERIRTYNFPENRVSDHRIGYKAHNLDSVLGGDMDDLLKALHDAERAERL 354 >gi|271963194|ref|YP_003337390.1| peptide chain release factor 1 [Streptosporangium roseum DSM 43021] gi|270506369|gb|ACZ84647.1| peptide chain release factor 1 [Streptosporangium roseum DSM 43021] Length=350 Score = 466 bits (1199), Expect = 3e-129, Method: Compositional matrix adjust. Identities = 231/348 (67%), Positives = 287/348 (83%), Gaps = 3/348 (0%) Query 7 TIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLETARE 66 +D LL+E+AELEL LADP +H++PA+AR GRR+A L PI+ T+R+L ++DL+TARE Sbjct 2 NLDELLSEYAELELKLADPTVHAHPAQARTFGRRYAELTPIITTYRELEGVQNDLDTARE 61 Query 67 LVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFAAD 126 L + DE+FA E LE RV EL+ +L +L PRDP+D DI++E+K+GEGGEESALFA D Sbjct 62 LASEDEAFAEEAKELEGRVPELEDKLRHLLIPRDPNDDKDIIMEIKAGEGGEESALFAGD 121 Query 127 LARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGGVHRVQ 186 L RMY+RYAER GW ++D T SDLGGYKD T+A+ ++ D +GVWSR+KFEGGVHRVQ Sbjct 122 LLRMYLRYAERVGWKTELIDATHSDLGGYKDVTVALKARGD--EGVWSRLKFEGGVHRVQ 179 Query 187 RVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSAVR 246 RVPVTESQGR+HTSAAGVLVYPE EEV VQ+D +DLRIDV+RSSG GGQ VNTTDSAVR Sbjct 180 RVPVTESQGRIHTSAAGVLVYPEAEEV-DVQVDPNDLRIDVYRSSGPGGQSVNTTDSAVR 238 Query 247 ITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDRSE 306 ITH+PTG+V +CQNE+SQLQNK A+++L ARLQA+AEE+A A A A+R SQIRTVDRSE Sbjct 239 ITHIPTGVVASCQNEKSQLQNKESAMRILRARLQAIAEEEANAAAMAERKSQIRTVDRSE 298 Query 307 RIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 RIRTYNFPENRI+DHR+G+K++NLDQVLDGDL A+ +L A+ +L Sbjct 299 RIRTYNFPENRISDHRVGFKAYNLDQVLDGDLTAVIQSLLDAEMAEKL 346 >gi|25027860|ref|NP_737914.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314] gi|259506251|ref|ZP_05749153.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314] gi|81749553|sp|Q8FQ31.1|RF1_COREF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|23493143|dbj|BAC18114.1| putative peptide chain release factor 1 [Corynebacterium efficiens YS-314] gi|259166155|gb|EEW50709.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314] Length=358 Score = 465 bits (1197), Expect = 4e-129, Method: Compositional matrix adjust. Identities = 233/354 (66%), Positives = 287/354 (82%), Gaps = 0/354 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 M V +D +LAE+ LE +ADPALH++PA ARRVG+R++ L PI+ HR+L RDD Sbjct 1 MAGHVSAVDDILAEYHGLEEQMADPALHNDPAAARRVGKRYSELQPIINVHRQLVQVRDD 60 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 LE ARE+ D FAAE LE + EL+ +L D+LAPRD HD DDIV+E+K+G GGEE+ Sbjct 61 LEAAREMAHEDHEFAAEAERLEVELVELEEKLADLLAPRDEHDGDDIVMEIKAGAGGEEA 120 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFA DL RMY +YA++HG+ + VLD SDLGG KD TL+I S+ + DG WS+ KFEG Sbjct 121 ALFAGDLLRMYQKYADKHGFIIEVLDSAESDLGGVKDITLSIRSRQPSRDGAWSQFKFEG 180 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQRVPVTESQGR+ TSAAGVLVYPEP+EV V+IDE ++R+DV+RSSGKGGQGVNT Sbjct 181 GVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVEDVEIDEKEIRVDVYRSSGKGGQGVNT 240 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVRITHLPTGIVVTCQ ERSQ+QN+ RA+QVLAARLQA+ +E+A A+A+ RASQIR Sbjct 241 TDSAVRITHLPTGIVVTCQKERSQIQNRARAMQVLAARLQALQKEEADAEAAEGRASQIR 300 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 T+DRSERIRTYN+PENRI+DHRIG+K++NLD VL+G+LD LF AL AA++ RL Sbjct 301 TMDRSERIRTYNWPENRISDHRIGFKANNLDAVLNGELDDLFTALRAAERAERL 354 >gi|172040385|ref|YP_001800099.1| peptide chain release factor 1 [Corynebacterium urealyticum DSM 7109] gi|171851689|emb|CAQ04665.1| peptide chain release factor RF-1 [Corynebacterium urealyticum DSM 7109] Length=371 Score = 465 bits (1196), Expect = 5e-129, Method: Compositional matrix adjust. Identities = 227/347 (66%), Positives = 281/347 (81%), Gaps = 0/347 (0%) Query 8 IDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLETAREL 67 +D +L+E+ LE LADP LH++P ARRVG+RF L P++ T+ +L +AR+D E A E+ Sbjct 21 MDDILSEYQGLEAQLADPELHNDPKAARRVGKRFQELQPVIQTYERLNTAREDHEAAAEM 80 Query 68 VASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFAADL 127 + D FA E LEA + EL +LTD+LAPRDP + DDI++E+KSG GGEE+ALFA +L Sbjct 81 ASEDAEFAEEATRLEAEIEELQEKLTDLLAPRDPKNGDDIIMEIKSGAGGEEAALFAGEL 140 Query 128 ARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGGVHRVQR 187 ARMY RYAERHG+A VL +DLGG KD T++I SK + DG W+ KFEGGVHRVQR Sbjct 141 ARMYQRYAERHGFATEVLGLNETDLGGVKDMTMSIRSKQPSRDGAWADFKFEGGVHRVQR 200 Query 188 VPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSAVRI 247 VPVTESQGR+ TSAAGVLVYPEP+EV V+IDE D+R+DV+RSSGKGGQGVNTTDSAVRI Sbjct 201 VPVTESQGRIQTSAAGVLVYPEPDEVEDVEIDEKDIRVDVYRSSGKGGQGVNTTDSAVRI 260 Query 248 THLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDRSER 307 THLPTG+VVTCQ ERSQ+QN+ RA+QVLAARLQ M EE+A A+A+ RA+QIRT+DRSER Sbjct 261 THLPTGVVVTCQKERSQIQNRARAMQVLAARLQQMKEEEAEAEAAEGRAAQIRTMDRSER 320 Query 308 IRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 IRTYNFPE+R++DHRIGYK++NLD VLDGDL++LF AL A++ RL Sbjct 321 IRTYNFPESRVSDHRIGYKANNLDSVLDGDLESLFAALKEAERIERL 367 >gi|302529800|ref|ZP_07282142.1| peptide chain release factor 1 [Streptomyces sp. AA4] gi|302438695|gb|EFL10511.1| peptide chain release factor 1 [Streptomyces sp. AA4] Length=356 Score = 465 bits (1196), Expect = 5e-129, Method: Compositional matrix adjust. Identities = 238/344 (70%), Positives = 289/344 (85%), Gaps = 1/344 (0%) Query 11 LLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLETARELVAS 70 LL EHA LE LADPA+H++ A AR++GRR+A L+P+V R+L ARDDL A+EL A Sbjct 9 LLDEHARLEQELADPAVHADQARARKLGRRYAELSPVVRAVRELDQARDDLSAAKELSAE 68 Query 71 DESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFAADLARM 130 D +FAAE L A++ +L+A+LT++L PRDP+D D+V+E+KSGEGGEESALFA DL RM Sbjct 69 DATFAAEADELTAKIPQLEAKLTELLLPRDPYDGSDVVMEIKSGEGGEESALFAGDLLRM 128 Query 131 YIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGGVHRVQRVPV 190 Y+RYAERH W VLD T SDLGGYKD TL++ SK +GVW+R+KFEGGVHRVQRVP Sbjct 129 YLRYAERHNWKAEVLDSTESDLGGYKDVTLSLKSKTADVEGVWARLKFEGGVHRVQRVPA 188 Query 191 TESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHL 250 TESQGR+HTSA+GVL+YPEPEEV +V+ID +DLRIDVFRSSG GGQ VNTTDSAVRITHL Sbjct 189 TESQGRIHTSASGVLIYPEPEEV-EVEIDPNDLRIDVFRSSGPGGQSVNTTDSAVRITHL 247 Query 251 PTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDRSERIRT 310 PTGIVV+CQNE+SQ+QN+ RALQVL ARLQA+AEE+A A AS R SQ+RTVDRSER+RT Sbjct 248 PTGIVVSCQNEKSQIQNRARALQVLQARLQAIAEEEAAAKASDARRSQVRTVDRSERVRT 307 Query 311 YNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 YNFPENRI+DHR+ YK++NLDQVLDG+LD + DAL+AAD++ RL Sbjct 308 YNFPENRISDHRVNYKAYNLDQVLDGELDGVLDALAAADREERL 351 >gi|260577564|ref|ZP_05845503.1| peptide chain release factor 1 [Corynebacterium jeikeium ATCC 43734] gi|258604288|gb|EEW17526.1| peptide chain release factor 1 [Corynebacterium jeikeium ATCC 43734] Length=358 Score = 463 bits (1192), Expect = 2e-128, Method: Compositional matrix adjust. Identities = 236/354 (67%), Positives = 287/354 (82%), Gaps = 0/354 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 M+Q ID +LAE+ LE+ L+DP LH++PA AR+VG+RF+ L PI+ TH+KL AR+D Sbjct 1 MSQSPSVIDDILAEYQGLEMQLSDPELHNDPAAARKVGKRFSELQPIIQTHQKLEQARED 60 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 E A E+ A D+ FA E LE +GEL+ QLTD+LAPRDPHD DDIV+E+KSG GGEE+ Sbjct 61 HEAASEMAAEDKEFAEEAKRLEEEIGELEEQLTDLLAPRDPHDGDDIVMEIKSGAGGEEA 120 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFA +LARMY RYAERHG++ +L +DLGG KD TL+I SK + DG WS KFEG Sbjct 121 ALFAGELARMYQRYAERHGFSTEILGLNETDLGGVKDMTLSIRSKQPSRDGAWSEFKFEG 180 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQR+PVTESQGR+ TSAAGVLVYPEP+EV V ID+ D+R+DV+RSSGKGGQGVNT Sbjct 181 GVHRVQRIPVTESQGRIQTSAAGVLVYPEPDEVEDVHIDDKDIRVDVYRSSGKGGQGVNT 240 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVRITHLPT IVVTCQ ERSQ+QN+ RA+QVLAARLQ + EE+A A+A+ RA+QIR Sbjct 241 TDSAVRITHLPTNIVVTCQKERSQIQNRARAMQVLAARLQQLKEEEAEAEAAEGRAAQIR 300 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 T+DRSERIRTYNFPE+R++DHRIGYK++NLD VLDGDL+AL AL AD+ RL Sbjct 301 TMDRSERIRTYNFPESRVSDHRIGYKANNLDSVLDGDLEALLAALKEADRARRL 354 >gi|68536431|ref|YP_251136.1| peptide chain release factor 1 [Corynebacterium jeikeium K411] gi|119361528|sp|Q4JUI9.1|RF1_CORJK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|68264030|emb|CAI37518.1| peptide chain release factor RF-1 [Corynebacterium jeikeium K411] Length=358 Score = 463 bits (1191), Expect = 2e-128, Method: Compositional matrix adjust. Identities = 234/354 (67%), Positives = 286/354 (81%), Gaps = 0/354 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 M+Q ID +LAE+ LE+ L+DP LH++PA AR+VG+RF+ L PI+ TH+KL AR+D Sbjct 1 MSQSPSVIDDILAEYQGLEMQLSDPELHNDPAAARKVGKRFSELQPIIQTHQKLEQARED 60 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 E A E+ + D+ FA E LE + EL+ QLTD+LAPRDPHD DDIV+E+KSG GGEE+ Sbjct 61 QEAASEMASEDKEFAEEAKRLEEEISELEEQLTDLLAPRDPHDGDDIVMEIKSGAGGEEA 120 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFA +LARMY RYAERHG++ +L +DLGG KD TL+I SK + DG WS KFEG Sbjct 121 ALFAGELARMYQRYAERHGFSTEILGLNETDLGGVKDMTLSIRSKQPSRDGAWSEFKFEG 180 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQR+PVTESQGR+ TSAAGVLVYPEP+EV V ID+ D+R+DV+RSSGKGGQGVNT Sbjct 181 GVHRVQRIPVTESQGRIQTSAAGVLVYPEPDEVEDVHIDDKDIRVDVYRSSGKGGQGVNT 240 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVRITHLPT IVVTCQ ERSQ+QN+ RA+QVLAARLQ + EE+A A+A+ RA+QIR Sbjct 241 TDSAVRITHLPTNIVVTCQKERSQIQNRARAMQVLAARLQQLKEEEAEAEAAEGRAAQIR 300 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 T+DRSERIRTYNFPE+R++DHRIGYK++NLD VLDGDL+AL AL AD+ RL Sbjct 301 TMDRSERIRTYNFPESRVSDHRIGYKANNLDSVLDGDLEALLAALKEADRARRL 354 >gi|258652312|ref|YP_003201468.1| peptide chain release factor 1 [Nakamurella multipartita DSM 44233] gi|258555537|gb|ACV78479.1| peptide chain release factor 1 [Nakamurella multipartita DSM 44233] Length=361 Score = 462 bits (1189), Expect = 4e-128, Method: Compositional matrix adjust. Identities = 231/353 (66%), Positives = 282/353 (80%), Gaps = 0/353 (0%) Query 2 TQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDL 61 TQ +D L+AE+ +L++ L+DPA+H++ A +R++GRR+A L PIV T R L + R DL Sbjct 3 TQSAPAVDALVAEYEDLQVKLSDPAVHADQAVSRKLGRRYAELTPIVTTARDLAATRGDL 62 Query 62 ETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESA 121 + A+EL A D FA E L RV EL+ +L+++LAPRDP D D+++EVK+GEGGEESA Sbjct 63 QAAQELGAEDAGFAEEARTLAGRVDELEQRLSELLAPRDPDDGKDVLVEVKAGEGGEESA 122 Query 122 LFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGG 181 LFA DL RMY+RYAER GW VL T SDLGGYKD T+A+ S A TPDGVW+R+KFEGG Sbjct 123 LFAGDLLRMYLRYAERRGWKTEVLSATESDLGGYKDVTVAVKSPAATPDGVWARLKFEGG 182 Query 182 VHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTT 241 VHRVQRVPVTESQGRVHTSAAGV V PE E+V V+I ++DLRIDVFRSSG GGQ VNTT Sbjct 183 VHRVQRVPVTESQGRVHTSAAGVFVAPEVEDVNDVEIADADLRIDVFRSSGPGGQSVNTT 242 Query 242 DSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRT 301 DSAVRITHLPTGIVV+CQNE+SQLQNK +A+++L AR+ A A A A A+ R SQ+RT Sbjct 243 DSAVRITHLPTGIVVSCQNEKSQLQNKEQAMRILRARMLAAARATADAAAADARRSQVRT 302 Query 302 VDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 VDRSER+RTYN+PENRI DHR+GYK++NLD VLDGDLDA+ DALSAAD+ RL Sbjct 303 VDRSERVRTYNYPENRIADHRVGYKAYNLDAVLDGDLDAVLDALSAADRAERL 355 >gi|237785868|ref|YP_002906573.1| peptide chain release factor 1 [Corynebacterium kroppenstedtii DSM 44385] gi|259585217|sp|C4LJM5.1|RF1_CORK4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|237758780|gb|ACR18030.1| peptide chain release factor RF-1 [Corynebacterium kroppenstedtii DSM 44385] Length=357 Score = 461 bits (1186), Expect = 8e-128, Method: Compositional matrix adjust. Identities = 233/354 (66%), Positives = 284/354 (81%), Gaps = 0/354 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 M V +D +++E+ LE LADP LH++ A AR+VG+RF+ L PI+ T+ +L + DD Sbjct 1 MATHVSAVDDIVSEYQGLEAQLADPDLHNDAARARKVGKRFSELQPIIQTNDRLNAVTDD 60 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 LE A E+ D+ FAAE L EL +L D+LAPRDPHD DDIV+EVKSG GGEE+ Sbjct 61 LEAAEEMAHEDQEFAAEAERLREEKEELSDKLADLLAPRDPHDGDDIVMEVKSGAGGEEA 120 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFA +L RMY RYA++HG+A+ VLD+ +DLGG KD T++I SK + DG WS KFEG Sbjct 121 ALFAGELVRMYQRYADKHGFAIDVLDDAPTDLGGIKDITMSIRSKKPSRDGAWSVFKFEG 180 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQRVPVTESQGR+ TSAAGVLVYPEP+E+ V+ID+ D+R+DV+RSSGKGGQGVNT Sbjct 181 GVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEIEDVEIDDKDIRVDVYRSSGKGGQGVNT 240 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVRITHLPTG++VTCQ ERSQ+QNK RA+QVLAARLQ M EE+A A ASADRA+Q+R Sbjct 241 TDSAVRITHLPTGLIVTCQKERSQIQNKARAMQVLAARLQQMKEEEAEAAASADRAAQVR 300 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 T+DRSERIRTYNFPENRI+DHRI YK+HNLDQVLDGDLD LF AL +A++ RL Sbjct 301 TMDRSERIRTYNFPENRISDHRINYKAHNLDQVLDGDLDDLFSALQSAERAERL 354 >gi|134102728|ref|YP_001108389.1| putative peptide chain release factor 1 [Saccharopolyspora erythraea NRRL 2338] gi|291007815|ref|ZP_06565788.1| putative peptide chain release factor 1 [Saccharopolyspora erythraea NRRL 2338] gi|133915351|emb|CAM05464.1| putative peptide chain release factor 1 [Saccharopolyspora erythraea NRRL 2338] Length=357 Score = 456 bits (1172), Expect = 3e-126, Method: Compositional matrix adjust. Identities = 245/349 (71%), Positives = 288/349 (83%), Gaps = 3/349 (0%) Query 8 IDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLETAREL 67 +D LLAE+AELE LADP +H++ A AR++GRR+A L P+V ++L AR DL TAREL Sbjct 6 LDGLLAEYAELERRLADPEVHADQAGARKLGRRYAELTPVVRCSKELDQARSDLATAREL 65 Query 68 VASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFAADL 127 D +FA E +L V L+A+LT++L PRDPHDA D++LEVKSGEGGEESALFA DL Sbjct 66 ADEDPAFAEEAESLAESVPALEAKLTELLLPRDPHDASDVLLEVKSGEGGEESALFAGDL 125 Query 128 ARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKA-DT-PDGVWSRMKFEGGVHRV 185 RMY+R+AER GW +LD T SDLGGYKDAT+A+ +KA DT PDGVWS++KFEGGVHRV Sbjct 126 LRMYLRFAERQGWRTEILDATESDLGGYKDATVAVKTKAGDTGPDGVWSKLKFEGGVHRV 185 Query 186 QRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSAV 245 QRVPVTESQGRVHTSAAGVLVYPEPEEV ++ DLRIDV+RSSG GGQ VNTTDSAV Sbjct 186 QRVPVTESQGRVHTSAAGVLVYPEPEEVEVEVDEK-DLRIDVYRSSGPGGQSVNTTDSAV 244 Query 246 RITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDRS 305 RITHLPTGIVV+CQNE+SQLQNK RA+QVL ARLQA+AEE+A +AS R SQ+RTVDRS Sbjct 245 RITHLPTGIVVSCQNEKSQLQNKIRAIQVLRARLQALAEEEAEREASETRRSQVRTVDRS 304 Query 306 ERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 ERIRTYNFPENRI+DHR+ YK++NLDQVLDGDLD + AL AAD+Q RL Sbjct 305 ERIRTYNFPENRISDHRVNYKAYNLDQVLDGDLDGVLGALVAADRQERL 353 >gi|300858256|ref|YP_003783239.1| peptide chain release factor RF-1 [Corynebacterium pseudotuberculosis FRC41] gi|300685710|gb|ADK28632.1| peptide chain release factor RF-1 [Corynebacterium pseudotuberculosis FRC41] gi|302205977|gb|ADL10319.1| Peptide chain release factor 1 [Corynebacterium pseudotuberculosis C231] gi|302330530|gb|ADL20724.1| Peptide chain release factor 1 [Corynebacterium pseudotuberculosis 1002] gi|308276212|gb|ADO26111.1| Peptide chain release factor RF-1 [Corynebacterium pseudotuberculosis I19] gi|341824646|gb|AEK92167.1| Peptide chain release factor 1 [Corynebacterium pseudotuberculosis PAT10] Length=356 Score = 453 bits (1166), Expect = 2e-125, Method: Compositional matrix adjust. Identities = 225/350 (65%), Positives = 279/350 (80%), Gaps = 0/350 (0%) Query 5 VQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLETA 64 V +D +++E+ +E +ADP + R++ +R++ L PI+ + KL ARDD E A Sbjct 4 VSAVDDIVSEYQGIEAQMADPETMGDQMLFRKLSKRYSELQPIINVNNKLVQARDDYEVA 63 Query 65 RELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFA 124 +E+ D F E A LE V L+ QL D+LAPRDPHD DDIV+EVK+G GGEE+ALFA Sbjct 64 KEMAHEDHEFQEEAARLETEVVVLEEQLADLLAPRDPHDGDDIVMEVKAGAGGEEAALFA 123 Query 125 ADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGGVHR 184 +L RMY RYA++HG+A+ VLD + SDLGG KD TL+I SK + DG WS KFEGGVHR Sbjct 124 GELVRMYQRYADKHGFAIEVLDSSESDLGGVKDMTLSIRSKTPSRDGAWSVFKFEGGVHR 183 Query 185 VQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSA 244 VQRVPVTESQGR+ TSAAGVLVYPEP+EV +++ID+ DLRIDV+RSSGKGGQGVNTTDSA Sbjct 184 VQRVPVTESQGRIQTSAAGVLVYPEPDEVAEIEIDDKDLRIDVYRSSGKGGQGVNTTDSA 243 Query 245 VRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDR 304 VRITHLPTG+VVTCQ ERSQ+QNK RA+QVLAARLQ+MAEEQA A+A+ RA+QIRT+DR Sbjct 244 VRITHLPTGLVVTCQKERSQIQNKARAMQVLAARLQSMAEEQAEAEAAEGRAAQIRTMDR 303 Query 305 SERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 SERIRTYN+PENRI+DHRIG+K++NLD VL+G+LD LF AL AA++ RL Sbjct 304 SERIRTYNWPENRISDHRIGFKANNLDSVLNGELDDLFTALRAAERAERL 353 >gi|340531265|gb|AEK46470.1| peptide chain release factor RF-1 [Amycolatopsis mediterranei S699] Length=356 Score = 452 bits (1163), Expect = 4e-125, Method: Compositional matrix adjust. Identities = 240/344 (70%), Positives = 287/344 (84%), Gaps = 1/344 (0%) Query 11 LLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLETARELVAS 70 LLAEHAELE LADPA+H++ A AR++GRR+A L P+V L + RDDL ARE+ + Sbjct 9 LLAEHAELETQLADPAVHADQARARKLGRRYAELTPVVRAVHDLDTVRDDLAAAREMASE 68 Query 71 DESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFAADLARM 130 D FAAE L AR+ +L+++LT++L PRDP+D D+V+E+KSGEGGEESALFA DL RM Sbjct 69 DAEFAAEAEELAARIPDLESRLTELLLPRDPYDGSDVVMEIKSGEGGEESALFAGDLLRM 128 Query 131 YIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGGVHRVQRVPV 190 Y+RYAERHGW VLD SDLGG+KD TL+I SKA DGVWSR+KFEGGVHRVQRVP Sbjct 129 YLRYAERHGWKAEVLDSVDSDLGGFKDVTLSIKSKAAAVDGVWSRLKFEGGVHRVQRVPA 188 Query 191 TESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHL 250 TESQGR+HTSA+GVL+YPEPEEV +V+ID +DLRIDVFRSSG GGQ VNTTDSAVRITHL Sbjct 189 TESQGRIHTSASGVLIYPEPEEV-EVEIDPNDLRIDVFRSSGPGGQSVNTTDSAVRITHL 247 Query 251 PTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDRSERIRT 310 PTGIVV+CQNE+SQ+QN+ RALQVL ARLQA+AEE+A A AS R SQ+RTVDRSER+RT Sbjct 248 PTGIVVSCQNEKSQIQNRARALQVLQARLQAVAEEEAAAKASDARRSQVRTVDRSERVRT 307 Query 311 YNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 YNFPENRI+DHR+ YK++NLDQVLDGDLD + DAL+ AD++ RL Sbjct 308 YNFPENRISDHRVNYKAYNLDQVLDGDLDGVLDALATADREERL 351 >gi|296119521|ref|ZP_06838079.1| peptide chain release factor 1 [Corynebacterium ammoniagenes DSM 20306] gi|295967404|gb|EFG80671.1| peptide chain release factor 1 [Corynebacterium ammoniagenes DSM 20306] Length=358 Score = 452 bits (1162), Expect = 5e-125, Method: Compositional matrix adjust. Identities = 214/354 (61%), Positives = 272/354 (77%), Gaps = 0/354 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 M V +D +++E+ +E+ +ADP + S+ + R++ +R+A L PI+ H +LT A++D Sbjct 1 MANEVSLVDDIVSEYQGIEMQMADPEVASDQNQFRKLSKRYAELRPIIVVHTQLTQAKED 60 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 L A+E+ D F E LE V EL+ QL D+LAPRD HD++DI++E+K+G GGEE+ Sbjct 61 LSDAKEMAYEDHDFQDEAERLEGVVLELEEQLADLLAPRDEHDSEDIIMEIKAGAGGEEA 120 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFAADLARMY RYA++ G++ V+ SDLGG KD T+ SK + DG WS KFEG Sbjct 121 ALFAADLARMYERYADKSGFSWEVIGINESDLGGVKDMTITFKSKTPSRDGAWSVFKFEG 180 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQRVPVTESQGR+ TSAAGVLVYPEP+EV +V IDE DLR+DV+RSSGKGGQGVNT Sbjct 181 GVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVAEVHIDEKDLRVDVYRSSGKGGQGVNT 240 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVR+THLPTG+VVTCQ ERSQ+QNK RA+QVL ARL+ M E A+A RASQ+R Sbjct 241 TDSAVRLTHLPTGLVVTCQRERSQIQNKARAMQVLQARLEQMEREAREAEAGEQRASQVR 300 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 T+DRSERIRTYN+PENRITDHRIGYK++NLD VLDGD+ +L DAL A ++ R+ Sbjct 301 TMDRSERIRTYNWPENRITDHRIGYKANNLDSVLDGDMGSLIDALQAQERAERM 354 >gi|300789609|ref|YP_003769900.1| peptide chain release factor RF-1 [Amycolatopsis mediterranei U32] gi|299799123|gb|ADJ49498.1| peptide chain release factor RF-1 [Amycolatopsis mediterranei U32] Length=356 Score = 451 bits (1159), Expect = 1e-124, Method: Compositional matrix adjust. Identities = 239/344 (70%), Positives = 286/344 (84%), Gaps = 1/344 (0%) Query 11 LLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLETARELVAS 70 LLAEHAELE LADPA+H++ A AR++GRR+A L P+V L + RDDL RE+ + Sbjct 9 LLAEHAELETQLADPAVHADQARARKLGRRYAELTPVVRAVHDLDTVRDDLAATREMASE 68 Query 71 DESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFAADLARM 130 D FAAE L AR+ +L+++LT++L PRDP+D D+V+E+KSGEGGEESALFA DL RM Sbjct 69 DAEFAAEAEELAARIPDLESRLTELLLPRDPYDGSDVVMEIKSGEGGEESALFAGDLLRM 128 Query 131 YIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGGVHRVQRVPV 190 Y+RYAERHGW VLD SDLGG+KD TL+I SKA DGVWSR+KFEGGVHRVQRVP Sbjct 129 YLRYAERHGWKAEVLDSVDSDLGGFKDVTLSIKSKAAAVDGVWSRLKFEGGVHRVQRVPA 188 Query 191 TESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHL 250 TESQGR+HTSA+GVL+YPEPEEV +V+ID +DLRIDVFRSSG GGQ VNTTDSAVRITHL Sbjct 189 TESQGRIHTSASGVLIYPEPEEV-EVEIDPNDLRIDVFRSSGPGGQSVNTTDSAVRITHL 247 Query 251 PTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDRSERIRT 310 PTGIVV+CQNE+SQ+QN+ RALQVL ARLQA+AEE+A A AS R SQ+RTVDRSER+RT Sbjct 248 PTGIVVSCQNEKSQIQNRARALQVLQARLQAVAEEEAAAKASDARRSQVRTVDRSERVRT 307 Query 311 YNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 YNFPENRI+DHR+ YK++NLDQVLDGDLD + DAL+ AD++ RL Sbjct 308 YNFPENRISDHRVNYKAYNLDQVLDGDLDGVLDALATADREERL 351 >gi|19552424|ref|NP_600426.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC 13032] gi|62390088|ref|YP_225490.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC 13032] gi|145295339|ref|YP_001138160.1| peptide chain release factor 1 [Corynebacterium glutamicum R] 6 more sequence titles Length=358 Score = 450 bits (1158), Expect = 2e-124, Method: Compositional matrix adjust. Identities = 232/354 (66%), Positives = 286/354 (81%), Gaps = 0/354 (0%) Query 1 MTQPVQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDD 60 M V +D +L+E+ LE +ADP LH++ A ARRVG+R++ L PI+ HR L SA++D Sbjct 1 MASQVSAVDDILSEYHGLEQQMADPELHNDAAAARRVGKRYSELQPIINVHRDLVSAQED 60 Query 61 LETARELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEES 120 LE ARE+ D F AE LE V EL+ +L D+LAPRDPHD +DIV+E+K+G GGEE+ Sbjct 61 LEAAREMAHEDHEFQAEAERLEVEVVELEEKLADLLAPRDPHDGEDIVMEIKAGAGGEEA 120 Query 121 ALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEG 180 ALFA DL RMY ++A++HG+ V VLD SDLGG KD TL+I S+ + DG WS+ KFEG Sbjct 121 ALFAGDLLRMYQKFADKHGFVVEVLDSAESDLGGVKDITLSIRSRQPSRDGAWSQFKFEG 180 Query 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNT 240 GVHRVQRVPVTESQGR+ TSAAGVLVYPEP+EV V+IDE D+R+DV+RSSGKGGQGVNT Sbjct 181 GVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVENVEIDEKDIRVDVYRSSGKGGQGVNT 240 Query 241 TDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIR 300 TDSAVRITHLPTG+VVTCQ ERSQ+QN+ RA+QVLAARLQAM EE+A A+A+ RA+QIR Sbjct 241 TDSAVRITHLPTGLVVTCQKERSQIQNRARAMQVLAARLQAMKEEEAAAEAATGRAAQIR 300 Query 301 TVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 T+DRSERIRTYN+PENRI+DHRIG+K++NLD VLDG+LD LF AL AA++ RL Sbjct 301 TMDRSERIRTYNWPENRISDHRIGFKANNLDSVLDGELDDLFTALQAAERAERL 354 >gi|340794797|ref|YP_004760260.1| peptide chain release factor RF-1 [Corynebacterium variabile DSM 44702] gi|340534707|gb|AEK37187.1| peptide chain release factor RF-1 [Corynebacterium variabile DSM 44702] Length=339 Score = 448 bits (1153), Expect = 5e-124, Method: Compositional matrix adjust. Identities = 226/335 (68%), Positives = 273/335 (82%), Gaps = 0/335 (0%) Query 20 LALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLETARELVASDESFAAEVA 79 + L+DP LH++ A ARRV +RF+ L P++ T+ +LT AR+D E A E+ + D FAAE Sbjct 1 MQLSDPVLHNDAAAARRVAKRFSELQPVIQTYNRLTQAREDHEAAAEMASEDAEFAAEAD 60 Query 80 ALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFAADLARMYIRYAERHG 139 L A + L+ +LTD+LAPRDPHD+DD+V+EVKSG GGEE+ALFA +L RMY RYAE+HG Sbjct 61 RLAAEIPALEEKLTDLLAPRDPHDSDDVVMEVKSGAGGEEAALFAGELVRMYQRYAEKHG 120 Query 140 WAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGGVHRVQRVPVTESQGRVHT 199 + VLD +DLGG KD T++I SK T DG WS KFEGGVHRVQR+PVTESQGR+ T Sbjct 121 FTCEVLDTNETDLGGVKDLTMSIRSKQPTRDGAWSVFKFEGGVHRVQRIPVTESQGRIQT 180 Query 200 SAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQ 259 SAAGVLVYPEP+EV VQID+ DLR+DV+RSSGKGGQGVNTTDSAVRITHLPTGIVVTCQ Sbjct 181 SAAGVLVYPEPDEVEDVQIDDKDLRVDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQ 240 Query 260 NERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDRSERIRTYNFPENRIT 319 ERSQ+QNK RA+QVLAARLQ M EE+A A A+ R +QIRT+DRSERIRTYNFPE+R++ Sbjct 241 KERSQIQNKARAMQVLAARLQQMKEEEADAAAAEGRHAQIRTMDRSERIRTYNFPESRVS 300 Query 320 DHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 DHRIGYK++NLD VLDGDL+ALF AL AD+ +RL Sbjct 301 DHRIGYKANNLDAVLDGDLEALFGALHDADRAARL 335 >gi|337290510|ref|YP_004629531.1| peptide chain release factor RF-1 [Corynebacterium ulcerans BR-AD22] gi|334696623|gb|AEG81420.1| peptide chain release factor RF-1 [Corynebacterium ulcerans 809] gi|334698816|gb|AEG83612.1| peptide chain release factor RF-1 [Corynebacterium ulcerans BR-AD22] Length=356 Score = 447 bits (1149), Expect = 2e-123, Method: Compositional matrix adjust. Identities = 227/350 (65%), Positives = 282/350 (81%), Gaps = 0/350 (0%) Query 5 VQTIDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLETA 64 V +D +++E+ +E +ADP + R++ +R++ L PI+ + KL ARDDLE A Sbjct 4 VSAVDDIVSEYQGIEAQMADPETMGDQMLFRKLSKRYSELQPIINVNNKLVQARDDLEVA 63 Query 65 RELVASDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFA 124 +E+ D F E A LE+ V L+ QL D+LAPRDPHD DDIV+EVK+G GGEE+ALFA Sbjct 64 KEMAHEDHEFQDEAARLESEVVVLEEQLADLLAPRDPHDGDDIVMEVKAGAGGEEAALFA 123 Query 125 ADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGGVHR 184 +++ RMY RYA++HG+AV VLD + SDLGG KD TL+I SK + DG WS KFEGGVHR Sbjct 124 SEIVRMYQRYADKHGFAVEVLDSSESDLGGVKDMTLSIRSKTPSRDGAWSVFKFEGGVHR 183 Query 185 VQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSA 244 VQRVPVTESQGR+ TSAAGVLVYPEP+EV +++ID+ DLRIDV+RSSGKGGQGVNTTDSA Sbjct 184 VQRVPVTESQGRIQTSAAGVLVYPEPDEVAEIEIDDKDLRIDVYRSSGKGGQGVNTTDSA 243 Query 245 VRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDR 304 VRITHLPTG+VVTCQ ERSQ+QNK RA+QVLAARLQAMAEEQA A+A+ RA+QIRT+DR Sbjct 244 VRITHLPTGLVVTCQKERSQIQNKARAMQVLAARLQAMAEEQAEAEAAEGRAAQIRTMDR 303 Query 305 SERIRTYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRL 354 SERIRTYN+PENRI+DHRIG+K++NLD VL+G+LD LF AL AA++ RL Sbjct 304 SERIRTYNWPENRISDHRIGFKANNLDSVLNGELDDLFTALRAAERAERL 353 Lambda K H 0.315 0.130 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 670036296356 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40