BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1301
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608441|ref|NP_215817.1| hypothetical protein Rv1301 [Mycoba... 429 2e-118
gi|31792494|ref|NP_854987.1| hypothetical protein Mb1333 [Mycoba... 427 7e-118
gi|289753378|ref|ZP_06512756.1| Sua5/YciO/YrdC/YwlC family prote... 367 6e-100
gi|183984067|ref|YP_001852358.1| hypothetical protein MMAR_4096 ... 362 2e-98
gi|118619167|ref|YP_907499.1| hypothetical protein MUL_3963 [Myc... 361 5e-98
gi|240169513|ref|ZP_04748172.1| hypothetical protein MkanA1_0938... 355 3e-96
gi|15827567|ref|NP_301830.1| hypothetical protein ML1136 [Mycoba... 352 2e-95
gi|120405291|ref|YP_955120.1| Sua5/YciO/YrdC/YwlC family protein... 350 9e-95
gi|118462898|ref|YP_880757.1| Sua5/YciO/YrdC/YwlC family protein... 343 1e-92
gi|315443362|ref|YP_004076241.1| translation factor SUA5 [Mycoba... 342 2e-92
gi|296170242|ref|ZP_06851835.1| Sua5/YciO/YrdC/YwlC family prote... 341 4e-92
gi|342858038|ref|ZP_08714694.1| Sua5/YciO/YrdC/YwlC family prote... 340 7e-92
gi|145222897|ref|YP_001133575.1| Sua5/YciO/YrdC/YwlC family prot... 339 2e-91
gi|41408558|ref|NP_961394.1| hypothetical protein MAP2460c [Myco... 338 3e-91
gi|108800849|ref|YP_641046.1| translation factor SUA5 [Mycobacte... 334 4e-90
gi|254821300|ref|ZP_05226301.1| Sua5/YciO/YrdC/YwlC family prote... 332 3e-89
gi|118467540|ref|YP_889200.1| Sua5/YciO/YrdC/YwlC family protein... 330 1e-88
gi|262201850|ref|YP_003273058.1| sua5/YciO/YrdC/YwlC family prot... 303 1e-80
gi|343928061|ref|ZP_08767526.1| hypothetical protein GOALK_100_0... 298 5e-79
gi|111018482|ref|YP_701454.1| hypothetical protein RHA1_ro01481 ... 296 9e-79
gi|226360605|ref|YP_002778383.1| hypothetical protein ROP_11910 ... 295 3e-78
gi|169628535|ref|YP_001702184.1| hypothetical protein MAB_1444 [... 291 6e-77
gi|326382084|ref|ZP_08203777.1| hypothetical protein SCNU_04032 ... 289 2e-76
gi|54023023|ref|YP_117265.1| hypothetical protein nfa10560 [Noca... 287 9e-76
gi|312139169|ref|YP_004006505.1| hypothetical protein REQ_17520 ... 286 1e-75
gi|319948466|ref|ZP_08022602.1| hypothetical protein ES5_03818 [... 284 8e-75
gi|296138965|ref|YP_003646208.1| Sua5/YciO/YrdC/YwlC family prot... 281 5e-74
gi|226307402|ref|YP_002767362.1| hypothetical protein RER_39150 ... 277 8e-73
gi|38233637|ref|NP_939404.1| hypothetical protein DIP1043 [Coryn... 276 1e-72
gi|134102725|ref|YP_001108386.1| SUA5/YciO/YrdC/YwlC [Saccharopo... 275 3e-72
gi|25027862|ref|NP_737916.1| hypothetical protein CE1306 [Coryne... 273 1e-71
gi|19552426|ref|NP_600428.1| putative translation factor (SUA5) ... 272 2e-71
gi|337290512|ref|YP_004629533.1| hypothetical protein CULC22_009... 272 2e-71
gi|333989940|ref|YP_004522554.1| hypothetical protein JDM601_130... 272 2e-71
gi|334696625|gb|AEG81422.1| hypothetical protein CULC809_00886 [... 272 3e-71
gi|333920924|ref|YP_004494505.1| Sua5/YciO/YrdC/YwlC family prot... 272 3e-71
gi|257056937|ref|YP_003134769.1| translation factor SUA5 [Saccha... 271 6e-71
gi|306835873|ref|ZP_07468868.1| Sua5/YciO/YrdC/YwlC family prote... 270 9e-71
gi|227501696|ref|ZP_03931745.1| Sua5/YciO/YrdC/YwlC family prote... 270 1e-70
gi|145295341|ref|YP_001138162.1| hypothetical protein cgR_1281 [... 270 1e-70
gi|255324518|ref|ZP_05365635.1| Sua5/YciO/YrdC/YwlC family prote... 267 8e-70
gi|289569313|ref|ZP_06449540.1| conserved hypothetical protein [... 267 9e-70
gi|311740612|ref|ZP_07714439.1| Sua5/YciO/YrdC/YwlC family prote... 266 1e-69
gi|300789603|ref|YP_003769894.1| SUA5/YciO/YrdC/YwlC family prot... 266 2e-69
gi|325002822|ref|ZP_08123934.1| translation factor SUA5 [Pseudon... 266 2e-69
gi|227832891|ref|YP_002834598.1| hypothetical protein cauri_1065... 265 3e-69
gi|300858258|ref|YP_003783241.1| hypothetical protein cpfrc_0084... 265 3e-69
gi|227503860|ref|ZP_03933909.1| Sua5/YciO/YrdC/YwlC family prote... 264 5e-69
gi|296119523|ref|ZP_06838081.1| Sua5/YciO/YrdC/YwlC family prote... 262 2e-68
gi|237785866|ref|YP_002906571.1| hypothetical protein ckrop_1283... 261 4e-68
>gi|15608441|ref|NP_215817.1| hypothetical protein Rv1301 [Mycobacterium tuberculosis H37Rv]
gi|15840751|ref|NP_335788.1| hypothetical protein MT1340 [Mycobacterium tuberculosis CDC1551]
gi|148661089|ref|YP_001282612.1| hypothetical protein MRA_1309 [Mycobacterium tuberculosis H37Ra]
57 more sequence titles
Length=217
Score = 429 bits (1103), Expect = 2e-118, Method: Compositional matrix adjust.
Identities = 216/217 (99%), Positives = 217/217 (100%), Gaps = 0/217 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
+TETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG
Sbjct 1 MTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM
Sbjct 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG
Sbjct 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASLFG 217
STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASLFG
Sbjct 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASLFG 217
>gi|31792494|ref|NP_854987.1| hypothetical protein Mb1333 [Mycobacterium bovis AF2122/97]
gi|121637230|ref|YP_977453.1| hypothetical protein BCG_1361 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224989705|ref|YP_002644392.1| hypothetical protein JTY_1336 [Mycobacterium bovis BCG str. Tokyo
172]
16 more sequence titles
Length=217
Score = 427 bits (1097), Expect = 7e-118, Method: Compositional matrix adjust.
Identities = 215/217 (99%), Positives = 216/217 (99%), Gaps = 0/217 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
+TETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG
Sbjct 1 MTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM
Sbjct 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG
Sbjct 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASLFG 217
STIVDLTGATPRVLR GPVSTERIAEVLGVDAASLFG
Sbjct 181 STIVDLTGATPRVLRQGPVSTERIAEVLGVDAASLFG 217
>gi|289753378|ref|ZP_06512756.1| Sua5/YciO/YrdC/YwlC family protein [Mycobacterium tuberculosis
EAS054]
gi|289693965|gb|EFD61394.1| Sua5/YciO/YrdC/YwlC family protein [Mycobacterium tuberculosis
EAS054]
Length=188
Score = 367 bits (942), Expect = 6e-100, Method: Compositional matrix adjust.
Identities = 186/188 (99%), Positives = 187/188 (99%), Gaps = 0/188 (0%)
Query 30 VVMPTDTVYGIGADAFDSSAVAALLSAKGRGRDMPVGVLVGSWHTIEGLVYSMPDGAREL 89
+VMPTDTVYGIGADAFDSSAVAALLSAKGRGRDMPVGVLVGSWHTIEGLVYSMPDGAREL
Sbjct 1 MVMPTDTVYGIGADAFDSSAVAALLSAKGRGRDMPVGVLVGSWHTIEGLVYSMPDGAREL 60
Query 90 IRAFWPGALSLVVVQAPSLQWDLGDAHGTVMLRMPLHPVAIELLREVGPMAVSSANISGH 149
IRAFWPGALSLVVVQAPSLQWDLGDAHGTVMLRMPLHPVAIELLREVGPMAVSSANISGH
Sbjct 61 IRAFWPGALSLVVVQAPSLQWDLGDAHGTVMLRMPLHPVAIELLREVGPMAVSSANISGH 120
Query 150 PPPVDAEQARSQLGDHVAVYLDAGPSEQQAGSTIVDLTGATPRVLRPGPVSTERIAEVLG 209
PPPVDAEQARSQLGDHVAVYLDAGPSEQQAGSTIVDLTGATPRVLR GPVSTERIAEVLG
Sbjct 121 PPPVDAEQARSQLGDHVAVYLDAGPSEQQAGSTIVDLTGATPRVLRQGPVSTERIAEVLG 180
Query 210 VDAASLFG 217
VDAASLFG
Sbjct 181 VDAASLFG 188
>gi|183984067|ref|YP_001852358.1| hypothetical protein MMAR_4096 [Mycobacterium marinum M]
gi|183177393|gb|ACC42503.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=216
Score = 362 bits (930), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 181/217 (84%), Positives = 196/217 (91%), Gaps = 1/217 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
++E FDCADP+QRS GI SA GA+KAG+LVVMPTDTVYGIGADAFDS+AV ALLSAKGRG
Sbjct 1 MSEVFDCADPDQRSNGIASAAGALKAGRLVVMPTDTVYGIGADAFDSAAVNALLSAKGRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
RDMPVGVLVGSWHTIEGLV+SMP GARELIRAFWPGALSLVVVQAPSLQWDLG+AHGTVM
Sbjct 61 RDMPVGVLVGSWHTIEGLVFSMPAGARELIRAFWPGALSLVVVQAPSLQWDLGNAHGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVAIELLR+VGPMAVSSAN+SG PP VD AR+Q GD V VYLD GP+ QQA
Sbjct 121 LRMPLHPVAIELLRQVGPMAVSSANVSGQPPAVDVADARNQFGDLVDVYLDGGPAAQQAA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASLFG 217
STIVDLTGA PR+LRPGPVS ERIA+VLGVDA +L G
Sbjct 181 STIVDLTGA-PRILRPGPVSAERIADVLGVDATTLTG 216
>gi|118619167|ref|YP_907499.1| hypothetical protein MUL_3963 [Mycobacterium ulcerans Agy99]
gi|118571277|gb|ABL06028.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=216
Score = 361 bits (926), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 180/215 (84%), Positives = 195/215 (91%), Gaps = 1/215 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
++E FDCADP+QRS GI SA GA+KAG+LVVMPTDTVYGIGADAFDS+AV ALLSAKGRG
Sbjct 1 MSEVFDCADPDQRSNGIASAAGALKAGRLVVMPTDTVYGIGADAFDSAAVNALLSAKGRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
RDMPVGVLVGSWHTIEGLV+SMP GARELIRAFWPGALSLVVVQAPSLQWDLG+AHGTVM
Sbjct 61 RDMPVGVLVGSWHTIEGLVFSMPAGARELIRAFWPGALSLVVVQAPSLQWDLGNAHGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVAIELLR+VGPMAVSSAN+SG PP VD AR+Q GD V VYLD GP+ QQA
Sbjct 121 LRMPLHPVAIELLRQVGPMAVSSANVSGQPPAVDVADARNQFGDLVDVYLDGGPAAQQAA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
STIVDLTGA PR+LRPGPVS ERIA+VLGVDA +L
Sbjct 181 STIVDLTGA-PRILRPGPVSAERIADVLGVDATTL 214
>gi|240169513|ref|ZP_04748172.1| hypothetical protein MkanA1_09381 [Mycobacterium kansasii ATCC
12478]
Length=219
Score = 355 bits (911), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 178/214 (84%), Positives = 191/214 (90%), Gaps = 0/214 (0%)
Query 3 ETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRGRD 62
E F+CADP QRS GI +AV A+KAG+LVVMPTDTVYG+ ADAFD SAV ALL+AKGRGRD
Sbjct 5 ELFNCADPGQRSSGITAAVAALKAGRLVVMPTDTVYGVAADAFDRSAVDALLAAKGRGRD 64
Query 63 MPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVMLR 122
MPVGVLVGSWHTIEGLVYS+P GARELIRAFWPGALSLVVVQAPSLQWDLGDA GTVMLR
Sbjct 65 MPVGVLVGSWHTIEGLVYSVPPGARELIRAFWPGALSLVVVQAPSLQWDLGDARGTVMLR 124
Query 123 MPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAGST 182
MPLHPVAIELLREVGP+AVSSAN+SG P VDA +AR QLGD V VYLD GP+ QQA ST
Sbjct 125 MPLHPVAIELLREVGPLAVSSANVSGQPAAVDAGEARRQLGDRVDVYLDGGPAAQQAAST 184
Query 183 IVDLTGATPRVLRPGPVSTERIAEVLGVDAASLF 216
IVDLTGATPR+LRPGPVS ERIAEVLGVD A+L
Sbjct 185 IVDLTGATPRILRPGPVSAERIAEVLGVDVATLI 218
>gi|15827567|ref|NP_301830.1| hypothetical protein ML1136 [Mycobacterium leprae TN]
gi|221230044|ref|YP_002503460.1| hypothetical protein MLBr_01136 [Mycobacterium leprae Br4923]
gi|1176863|sp|P45831.1|Y1136_MYCLE RecName: Full=Uncharacterized protein ML1136
gi|699330|gb|AAA63091.1| sua5 [Mycobacterium leprae]
gi|13093117|emb|CAC31517.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933151|emb|CAR71231.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=220
Score = 352 bits (904), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/216 (83%), Positives = 189/216 (88%), Gaps = 0/216 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
+ E FDCADP+QR+RGI SAV A+K G+LVVMPTDTVYGIGADAFD +AVAALLSAKGRG
Sbjct 4 MNEVFDCADPDQRARGIASAVAALKGGRLVVMPTDTVYGIGADAFDRAAVAALLSAKGRG 63
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
RDMPVGVLVGSWHTIEGLVY+MPDGARELIRAFWPGALSLVVV APSL WDLGDAHGTVM
Sbjct 64 RDMPVGVLVGSWHTIEGLVYTMPDGARELIRAFWPGALSLVVVHAPSLNWDLGDAHGTVM 123
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLH VAIELL EVGPMAVSSAN+SG P VD + AR QLG+ V VYLDAGPS QQA
Sbjct 124 LRMPLHSVAIELLCEVGPMAVSSANVSGQPAAVDVDGARGQLGELVGVYLDAGPSAQQAA 183
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASLF 216
STIVDLT ATPR+LR GPVS RIAEVLGV ASL
Sbjct 184 STIVDLTEATPRILRAGPVSVARIAEVLGVVPASLI 219
>gi|120405291|ref|YP_955120.1| Sua5/YciO/YrdC/YwlC family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958109|gb|ABM15114.1| translation factor SUA5 [Mycobacterium vanbaalenii PYR-1]
Length=220
Score = 350 bits (898), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 175/215 (82%), Positives = 191/215 (89%), Gaps = 0/215 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
+TETFDC DPEQR GI SA+ A+K G+LVVMPTDTVYGIGADAFD AVAALL+AKGRG
Sbjct 1 MTETFDCTDPEQRDTGIASAISALKGGRLVVMPTDTVYGIGADAFDGEAVAALLAAKGRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
R+MPV VLVGSWHTI+GLVYS+P+ A+ELIRAFWPGALSLVV QAPSLQWDLGDA+GTVM
Sbjct 61 RNMPVPVLVGSWHTIQGLVYSVPNSAKELIRAFWPGALSLVVRQAPSLQWDLGDANGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVAIELLREVGPMAVSSANISG PP V A QAR QLGD V VYLD GP+EQQA
Sbjct 121 LRMPLHPVAIELLREVGPMAVSSANISGRPPAVTAAQAREQLGDLVEVYLDGGPAEQQAA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
STIVDLTGA PRVLR GPV+ + IA+VLGVDAA+L
Sbjct 181 STIVDLTGAHPRVLREGPVTLDAIADVLGVDAATL 215
>gi|118462898|ref|YP_880757.1| Sua5/YciO/YrdC/YwlC family protein [Mycobacterium avium 104]
gi|254774340|ref|ZP_05215856.1| Sua5/YciO/YrdC/YwlC family protein [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118164185|gb|ABK65082.1| Sua5/YciO/YrdC/YwlC family protein [Mycobacterium avium 104]
Length=219
Score = 343 bits (879), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 177/215 (83%), Positives = 196/215 (92%), Gaps = 0/215 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
+++ FDCADP+QRSRGI +A A+K G+LVVMPTDTVYGIGADAF+S+AV+ALLSAKGRG
Sbjct 1 MSDVFDCADPDQRSRGIAAAAAAVKGGRLVVMPTDTVYGIGADAFNSAAVSALLSAKGRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
RDMPVGVLVGSWHTIEGLVY+MPDGAR+LIRAFWPGALSLVV QAPSLQWDLGDA GTVM
Sbjct 61 RDMPVGVLVGSWHTIEGLVYTMPDGARDLIRAFWPGALSLVVTQAPSLQWDLGDARGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVAIELLREVGPMAVSSANISGHP VDA++AR QLGD V VYL AG +E+ A
Sbjct 121 LRMPLHPVAIELLREVGPMAVSSANISGHPAAVDADEARGQLGDLVDVYLAAGRAERGAA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
STIVDLTGATPR+LRPGPVS +RIAEVLG+D SL
Sbjct 181 STIVDLTGATPRILRPGPVSAQRIAEVLGIDPESL 215
>gi|315443362|ref|YP_004076241.1| translation factor SUA5 [Mycobacterium sp. Spyr1]
gi|315261665|gb|ADT98406.1| translation factor SUA5 [Mycobacterium sp. Spyr1]
Length=221
Score = 342 bits (878), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 172/212 (82%), Positives = 186/212 (88%), Gaps = 0/212 (0%)
Query 5 FDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRGRDMP 64
FDCADP QR+ GI SA+ A+K G+LVVMPTDTVYGIGADAFD AVAALL AKGRGRDMP
Sbjct 6 FDCADPAQRATGIASAISALKEGRLVVMPTDTVYGIGADAFDGEAVAALLDAKGRGRDMP 65
Query 65 VGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVMLRMP 124
V VLVGSWHTI+GLVY++P+ A+ELIRAFWPGALSLVV QAPSLQWDLGDA+GTVMLRMP
Sbjct 66 VPVLVGSWHTIQGLVYTVPNSAKELIRAFWPGALSLVVHQAPSLQWDLGDANGTVMLRMP 125
Query 125 LHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAGSTIV 184
LHPVAIELLREVGPMAVSSANISG PP V A QAR QLGD V VYLD GP+EQQA STIV
Sbjct 126 LHPVAIELLREVGPMAVSSANISGSPPAVTAAQAREQLGDRVEVYLDGGPAEQQAASTIV 185
Query 185 DLTGATPRVLRPGPVSTERIAEVLGVDAASLF 216
DLTGA PRVLR GPV+ E IA+VLGV+A SL
Sbjct 186 DLTGAHPRVLRQGPVTLEAIADVLGVEAQSLL 217
>gi|296170242|ref|ZP_06851835.1| Sua5/YciO/YrdC/YwlC family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895118|gb|EFG74836.1| Sua5/YciO/YrdC/YwlC family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=222
Score = 341 bits (874), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 179/215 (84%), Positives = 193/215 (90%), Gaps = 0/215 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
+TE FDCADP QRSRGI +A GA+K G+LVVMPTDTVYGIGADAF+S+AV ALLSAKGRG
Sbjct 4 MTEVFDCADPGQRSRGIAAAAGALKGGRLVVMPTDTVYGIGADAFNSAAVTALLSAKGRG 63
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
RDMPVGVLVGSWHTIEGLVY+MP GAR+LIRAFWPGALSLVV QAPSLQWDLGDA GTVM
Sbjct 64 RDMPVGVLVGSWHTIEGLVYTMPGGARDLIRAFWPGALSLVVTQAPSLQWDLGDARGTVM 123
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVAIELLREVGPMAVSSAN+SG P VDA +AR QLG+ V VYLDAG ++QQA
Sbjct 124 LRMPLHPVAIELLREVGPMAVSSANVSGRPAAVDAAEARDQLGELVDVYLDAGTAQQQAA 183
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
STIVDLTG PR+LRPGPVS ERIAEVLGVDA SL
Sbjct 184 STIVDLTGPAPRILRPGPVSAERIAEVLGVDAESL 218
>gi|342858038|ref|ZP_08714694.1| Sua5/YciO/YrdC/YwlC family protein [Mycobacterium colombiense
CECT 3035]
gi|342135371|gb|EGT88537.1| Sua5/YciO/YrdC/YwlC family protein [Mycobacterium colombiense
CECT 3035]
Length=219
Score = 340 bits (873), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 179/215 (84%), Positives = 195/215 (91%), Gaps = 0/215 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
++E FDCADP QRS GI +A GA+K G+LVVMPTDTVYGIGADAF+S+AV+ALLSAKGRG
Sbjct 1 MSEVFDCADPGQRSLGIAAAAGALKGGRLVVMPTDTVYGIGADAFNSAAVSALLSAKGRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
RDMPVGVLVGSWHTIEGLVY+MPDGAR+LIRAFWPGALSLVV QAPSLQWDLGDA GTVM
Sbjct 61 RDMPVGVLVGSWHTIEGLVYTMPDGARDLIRAFWPGALSLVVSQAPSLQWDLGDARGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVAIELLREVGP+AVSSAN+SGHP VDA +ARSQLGD V VYL+AGP+EQ A
Sbjct 121 LRMPLHPVAIELLREVGPLAVSSANVSGHPAAVDAGEARSQLGDLVDVYLEAGPAEQGAA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
STIVDLTGA PR+LRPGPVS ERIAEVL VD SL
Sbjct 181 STIVDLTGAAPRILRPGPVSAERIAEVLAVDPESL 215
>gi|145222897|ref|YP_001133575.1| Sua5/YciO/YrdC/YwlC family protein [Mycobacterium gilvum PYR-GCK]
gi|145215383|gb|ABP44787.1| translation factor SUA5 [Mycobacterium gilvum PYR-GCK]
Length=221
Score = 339 bits (869), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 171/212 (81%), Positives = 184/212 (87%), Gaps = 0/212 (0%)
Query 5 FDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRGRDMP 64
FDCADP QR+ GI SA+ A+K G+LVVMPTDTVYGIGADAFD AVAALL AKGRGRDMP
Sbjct 6 FDCADPAQRATGIASAISALKEGRLVVMPTDTVYGIGADAFDGEAVAALLDAKGRGRDMP 65
Query 65 VGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVMLRMP 124
V VLVGSWHTI GLVY++P+ A+ELIRAFWPGALSLVV QAPSLQWDLGDA+GTVMLRMP
Sbjct 66 VPVLVGSWHTISGLVYTVPNSAKELIRAFWPGALSLVVHQAPSLQWDLGDANGTVMLRMP 125
Query 125 LHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAGSTIV 184
LHPVAIELLREVGPMAVSSANISG P V A QAR QLGD V VYLD GP+EQQA STIV
Sbjct 126 LHPVAIELLREVGPMAVSSANISGSPAAVTAAQAREQLGDRVEVYLDGGPAEQQAASTIV 185
Query 185 DLTGATPRVLRPGPVSTERIAEVLGVDAASLF 216
DLTGA PRVLR GPV+ E IA+VLGV+A SL
Sbjct 186 DLTGAHPRVLRQGPVTLEAIADVLGVEAQSLL 217
>gi|41408558|ref|NP_961394.1| hypothetical protein MAP2460c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396916|gb|AAS04777.1| hypothetical protein MAP_2460c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336460908|gb|EGO39791.1| Sua5/YciO/YrdC/YwlC family protein [Mycobacterium avium subsp.
paratuberculosis S397]
Length=219
Score = 338 bits (868), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 176/215 (82%), Positives = 195/215 (91%), Gaps = 0/215 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
+++ FDCADP+QRSRGI +A A+K G+LVVMPTDTVYGIGADAF+S+AV+ALLSAKGRG
Sbjct 1 MSDFFDCADPDQRSRGIAAAAAAVKGGRLVVMPTDTVYGIGADAFNSAAVSALLSAKGRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
RDMPVGVLVGSWHTIEGLVY+MPDGAR+LIRAFWPGALSLVV QAPSLQWDLGDA GTVM
Sbjct 61 RDMPVGVLVGSWHTIEGLVYTMPDGARDLIRAFWPGALSLVVPQAPSLQWDLGDARGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVAIELLREVGPMAVSSANISGHP VDA++AR QLGD V VYL AG +E+ A
Sbjct 121 LRMPLHPVAIELLREVGPMAVSSANISGHPAAVDADEARGQLGDLVDVYLAAGRAERGAA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
STIVDLTGATPR+LRPGPVS +RIA VLG+D SL
Sbjct 181 STIVDLTGATPRILRPGPVSAQRIAAVLGIDPESL 215
>gi|108800849|ref|YP_641046.1| translation factor SUA5 [Mycobacterium sp. MCS]
gi|119869989|ref|YP_939941.1| translation factor SUA5 [Mycobacterium sp. KMS]
gi|126436447|ref|YP_001072138.1| translation factor SUA5 [Mycobacterium sp. JLS]
gi|108771268|gb|ABG09990.1| translation factor SUA5 [Mycobacterium sp. MCS]
gi|119696078|gb|ABL93151.1| translation factor SUA5 [Mycobacterium sp. KMS]
gi|126236247|gb|ABN99647.1| translation factor SUA5 [Mycobacterium sp. JLS]
Length=218
Score = 334 bits (857), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/216 (78%), Positives = 185/216 (86%), Gaps = 0/216 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
+T+ FDC DP+ R+ GI +AV A+K G LVV+PTDTVYGIGADAF++ AVAALL+AKGRG
Sbjct 1 MTQLFDCTDPDNRATGIAAAVSALKDGGLVVLPTDTVYGIGADAFNNEAVAALLAAKGRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
RDMPV VLVGSWHTIEGLVY++P ARELIRAFWPGALSLVV QAPSL WDLGDAHGTVM
Sbjct 61 RDMPVPVLVGSWHTIEGLVYTVPHTARELIRAFWPGALSLVVRQAPSLPWDLGDAHGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVAIELLREVGPMAVSSANISG P V A AR QLGD V VYLDAGPSEQQA
Sbjct 121 LRMPLHPVAIELLREVGPMAVSSANISGRPAAVSAADAREQLGDLVDVYLDAGPSEQQAA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASLF 216
STIVDL+GA PR+LR GPV+ E +AEVLGV+ SL
Sbjct 181 STIVDLSGAHPRILRTGPVTAEAVAEVLGVNTESLL 216
>gi|254821300|ref|ZP_05226301.1| Sua5/YciO/YrdC/YwlC family protein [Mycobacterium intracellulare
ATCC 13950]
Length=219
Score = 332 bits (850), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/215 (82%), Positives = 191/215 (89%), Gaps = 0/215 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
+T+ FDCADPEQR+ GI +A GA+K G+LVVMPTDTVYGIGADAF+S+AV+ LLSAKGRG
Sbjct 1 MTDVFDCADPEQRALGIAAAAGALKGGRLVVMPTDTVYGIGADAFNSAAVSVLLSAKGRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
RDMPVGVLVGSWHTIEGLVY+MPDGAR+LIRAFWPGALSLVV QAPSLQWDLGDA GTVM
Sbjct 61 RDMPVGVLVGSWHTIEGLVYTMPDGARDLIRAFWPGALSLVVTQAPSLQWDLGDARGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVAIELLREVGP+AVSSANISG VDA +AR QLGD V VYL+AGPSEQ A
Sbjct 121 LRMPLHPVAIELLREVGPLAVSSANISGRTAAVDAGEARDQLGDLVDVYLEAGPSEQGAA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
STIVDLTG TPR+LR GPVS ERIAEVLGVD L
Sbjct 181 STIVDLTGPTPRILRLGPVSAERIAEVLGVDPEGL 215
>gi|118467540|ref|YP_889200.1| Sua5/YciO/YrdC/YwlC family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118168827|gb|ABK69723.1| Sua5/YciO/YrdC/YwlC family protein [Mycobacterium smegmatis str.
MC2 155]
Length=221
Score = 330 bits (845), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 166/215 (78%), Positives = 183/215 (86%), Gaps = 0/215 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
+T+ FDCAD EQR+ GI SAV A+K G+LVVMPTDTVYGIGADAFDS AV ALL+AKGRG
Sbjct 1 MTQLFDCADAEQRAIGIASAVSAVKGGRLVVMPTDTVYGIGADAFDSGAVGALLAAKGRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
RDMPVGVLVGSW TI+GLVYS+P ARELIRAFWPGALSLVV QAPSLQWDLGD G+VM
Sbjct 61 RDMPVGVLVGSWTTIDGLVYSVPRAARELIRAFWPGALSLVVHQAPSLQWDLGDTRGSVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVAIELLREVGPMAVSSANISG P A +AR QLGD V VYLD GP+EQQA
Sbjct 121 LRMPLHPVAIELLREVGPMAVSSANISGRPAAGTATEAREQLGDLVEVYLDGGPAEQQAA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
STIVDLTG+ PR+LR GP+S E +A VL V+ A+L
Sbjct 181 STIVDLTGSDPRILRTGPISAEDVARVLDVEVATL 215
>gi|262201850|ref|YP_003273058.1| sua5/YciO/YrdC/YwlC family protein [Gordonia bronchialis DSM
43247]
gi|262085197|gb|ACY21165.1| Sua5/YciO/YrdC/YwlC family protein [Gordonia bronchialis DSM
43247]
Length=219
Score = 303 bits (776), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 152/216 (71%), Positives = 176/216 (82%), Gaps = 0/216 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
++ FDC DPE RS GI +AVGAIKAG+LVVMPTDT+YG+G DAFDS AV+ALL+AK RG
Sbjct 1 MSIVFDCNDPESRSAGIRAAVGAIKAGRLVVMPTDTLYGLGCDAFDSDAVSALLAAKNRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
RDMPV VLVGSWHTI+GLV ++ AR+L+ AFWPG LSLVV QAPSL WDLGD GTVM
Sbjct 61 RDMPVPVLVGSWHTIDGLVLTVSQAARDLVEAFWPGGLSLVVEQAPSLAWDLGDTDGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVAIE+LREVGPMAVSSAN+SG P A+ AR+QLG+ VAVYLD GP+
Sbjct 121 LRMPLHPVAIEVLREVGPMAVSSANVSGQRPATTADDARAQLGEDVAVYLDGGPAPAAQA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASLF 216
STIVD+TG PR+LR G V+TE++AEVL VD ASL
Sbjct 181 STIVDVTGPVPRILRVGAVTTEQVAEVLDVDPASLL 216
>gi|343928061|ref|ZP_08767526.1| hypothetical protein GOALK_100_00650 [Gordonia alkanivorans NBRC
16433]
gi|343762069|dbj|GAA14452.1| hypothetical protein GOALK_100_00650 [Gordonia alkanivorans NBRC
16433]
Length=217
Score = 298 bits (762), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 149/217 (69%), Positives = 174/217 (81%), Gaps = 0/217 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
++ FDC DP+ RS GI +AVGA KAG+LVV+PTDT+YG+G DAFDS AV +LL+AK RG
Sbjct 1 MSIVFDCNDPQSRSAGIRAAVGAAKAGRLVVIPTDTLYGVGCDAFDSDAVGSLLAAKHRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
RDMPV VLVGSWH+I+GLV S+P AR+LI AFWPG LSLVV QAPSL WDLGD GTVM
Sbjct 61 RDMPVPVLVGSWHSIDGLVLSVPQAARDLIEAFWPGGLSLVVRQAPSLAWDLGDTDGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVAIELLREVGPMAVSSAN+SG PP ++AR QLGD ++VYLD GP+
Sbjct 121 LRMPLHPVAIELLREVGPMAVSSANVSGRPPATTVDEAREQLGDEISVYLDGGPAPVAQA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASLFG 217
STIVD++GA PRVLR G ++ E +AEVL VD SL G
Sbjct 181 STIVDVSGAQPRVLREGAITIEAVAEVLDVDPDSLRG 217
>gi|111018482|ref|YP_701454.1| hypothetical protein RHA1_ro01481 [Rhodococcus jostii RHA1]
gi|110818012|gb|ABG93296.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=218
Score = 296 bits (759), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 150/215 (70%), Positives = 173/215 (81%), Gaps = 0/215 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
++ +DC P+ RS G+ +A A+KAG+LVV+PTDT+YGIGADAFDS AVAALL AKGRG
Sbjct 1 MSTVYDCGLPDSRSAGMSAAKNALKAGRLVVLPTDTLYGIGADAFDSEAVAALLRAKGRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
RDMPV VLVGSW+TI+GLVYS+ R+LIRAFWPG LSLVV QAPSL WDLGD GTVM
Sbjct 61 RDMPVPVLVGSWNTIDGLVYSVRPQTRDLIRAFWPGGLSLVVEQAPSLAWDLGDTRGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVA+ELLREVGP+AVSSAN+SG PP E+AR QLG +VYLD G +EQ
Sbjct 121 LRMPLHPVALELLREVGPLAVSSANVSGQPPATTVEEAREQLGGSASVYLDGGRAEQGQA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
STIVDLTGATPR+LR G V T +A+VLGV A SL
Sbjct 181 STIVDLTGATPRILREGAVPTGDVADVLGVTAESL 215
>gi|226360605|ref|YP_002778383.1| hypothetical protein ROP_11910 [Rhodococcus opacus B4]
gi|226239090|dbj|BAH49438.1| hypothetical protein [Rhodococcus opacus B4]
Length=218
Score = 295 bits (755), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 150/215 (70%), Positives = 173/215 (81%), Gaps = 0/215 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
++ +DC P+ RS G+ +A A+KAG+LVV+PTDT+YGIGADAFDS AVAALL AKGRG
Sbjct 1 MSTVYDCGLPDSRSAGLSAAKNALKAGRLVVLPTDTLYGIGADAFDSEAVAALLRAKGRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
RDMPV VLVGSW+TI+GLVYS+ AR+LIRAFWPG LSLVV QAPSL WDLGD GTVM
Sbjct 61 RDMPVPVLVGSWNTIDGLVYSVRPQARDLIRAFWPGGLSLVVEQAPSLAWDLGDTRGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVA+ELLREVGP+AVSSAN+SG PP E+AR QLG +VYLD G +EQ
Sbjct 121 LRMPLHPVALELLREVGPLAVSSANVSGRPPATTVEEAREQLGGSASVYLDGGRAEQGQA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
STIVDLTGA PR+LR G V T +A+VLGV A SL
Sbjct 181 STIVDLTGAAPRILRVGAVPTGDVADVLGVTAESL 215
>gi|169628535|ref|YP_001702184.1| hypothetical protein MAB_1444 [Mycobacterium abscessus ATCC 19977]
gi|169240502|emb|CAM61530.1| Conserved hypothetical protein (Sua5/YciO/YRDC/ YwlC family protein?)
[Mycobacterium abscessus]
Length=226
Score = 291 bits (744), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 144/209 (69%), Positives = 168/209 (81%), Gaps = 0/209 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
+T +DC D R GI +AV A+KAG+LVVMPTDTVYG+G DAFDS AV ALL+AKGRG
Sbjct 1 MTVVYDCQDAATRQSGIDAAVSALKAGELVVMPTDTVYGLGCDAFDSGAVTALLAAKGRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
RDMPVGVLVGSWHTI+GLV+++P ARELI AFWPG LS++V APSL WDLGDA G+VM
Sbjct 61 RDMPVGVLVGSWHTIDGLVFAVPAAARELIEAFWPGPLSIIVRHAPSLSWDLGDAQGSVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMP+HPVAIELLR VGPMAVSSAN+SG P + A +AR QL D VAVYLD G +E A
Sbjct 121 LRMPMHPVAIELLRAVGPMAVSSANVSGRPAALTAAEARGQLDDKVAVYLDGGQAELGAA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLG 209
STIVDLTG P ++R GP+S E+I EV+G
Sbjct 181 STIVDLTGPAPVIVREGPISREQIVEVIG 209
>gi|326382084|ref|ZP_08203777.1| hypothetical protein SCNU_04032 [Gordonia neofelifaecis NRRL
B-59395]
gi|326199510|gb|EGD56691.1| hypothetical protein SCNU_04032 [Gordonia neofelifaecis NRRL
B-59395]
Length=219
Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/215 (70%), Positives = 176/215 (82%), Gaps = 0/215 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
++ FDC+DP++R GI +AVGA +AG+LVVMPTDTVYG+G DAFDS AVA+LL+AKGRG
Sbjct 1 MSAVFDCSDPDEREAGIRAAVGAARAGRLVVMPTDTVYGLGCDAFDSEAVASLLAAKGRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
RDMPV VLVGSWHT++GLV S+ AREL++AFWPG LSLVV QAPSL WDLGD G+VM
Sbjct 61 RDMPVPVLVGSWHTVDGLVRSVSPQARELVQAFWPGGLSLVVEQAPSLAWDLGDTSGSVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
+RMPLHPVAIELLREVGPMAVSSANISGHPP A +AR QL D V+VYLD GP++
Sbjct 121 IRMPLHPVAIELLREVGPMAVSSANISGHPPATTAPEARDQLQDKVSVYLDGGPADHAVA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
STIVDLTG P++LR G ++ E +AEVL VDA L
Sbjct 181 STIVDLTGPEPKILREGAITAEHLAEVLDVDAEEL 215
>gi|54023023|ref|YP_117265.1| hypothetical protein nfa10560 [Nocardia farcinica IFM 10152]
gi|54014531|dbj|BAD55901.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=234
Score = 287 bits (734), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 142/217 (66%), Positives = 171/217 (79%), Gaps = 0/217 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
++ +DCADP+ R+ G+ +A A+K+G+LVVMPTDT+YG+ ADAFDS+AVA LL+AK RG
Sbjct 14 VSTVYDCADPDSRAAGLTAATSALKSGRLVVMPTDTLYGLAADAFDSTAVAELLAAKRRG 73
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
RDMPV VLVGSW+TI+GLV+S+ AR+LIRAFWPG LSLVV QAPSL WDLGD GTVM
Sbjct 74 RDMPVPVLVGSWNTIDGLVFSVRPQARDLIRAFWPGGLSLVVQQAPSLAWDLGDTRGTVM 133
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVA++LLR+VGP+AVSSAN+SG PP A +AR QLG V+VYLD GP+
Sbjct 134 LRMPLHPVALDLLRDVGPLAVSSANVSGQPPATTAAEAREQLGSLVSVYLDGGPAAHAVA 193
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASLFG 217
STIVDLT PR+LR G VS IAEVLG+ L G
Sbjct 194 STIVDLTADRPRILREGAVSAAEIAEVLGMSPDELTG 230
>gi|312139169|ref|YP_004006505.1| hypothetical protein REQ_17520 [Rhodococcus equi 103S]
gi|325673526|ref|ZP_08153217.1| Sua5/YciO/YrdC/YwlC family protein [Rhodococcus equi ATCC 33707]
gi|311888508|emb|CBH47820.1| conserved hypothetical protein [Rhodococcus equi 103S]
gi|325555547|gb|EGD25218.1| Sua5/YciO/YrdC/YwlC family protein [Rhodococcus equi ATCC 33707]
Length=219
Score = 286 bits (733), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/217 (66%), Positives = 169/217 (78%), Gaps = 0/217 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
++ +DC P+ R G+ +A ++KAG+LVV+PTDTVYG+GADAFD AVA+LL AKGRG
Sbjct 1 MSTVYDCKQPDNREAGLTAAKNSLKAGRLVVLPTDTVYGLGADAFDGDAVASLLRAKGRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
RDMPV VLVGSW+TI+GLVYS+ ARELI+AFWPG LS+VV QAPSL WDLGD+ GTVM
Sbjct 61 RDMPVPVLVGSWNTIDGLVYSVRPQARELIKAFWPGGLSIVVQQAPSLAWDLGDSRGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVA+ELLR+VGPMAVSSANISG PP ++AR QLG +VYLD GP+
Sbjct 121 LRMPLHPVALELLRDVGPMAVSSANISGRPPATTVDEARDQLGGAASVYLDGGPATHAVA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASLFG 217
STIVDLTG R+LR G V T +AEVLGV SL G
Sbjct 181 STIVDLTGDEIRILREGAVPTADVAEVLGVTPESLLG 217
>gi|319948466|ref|ZP_08022602.1| hypothetical protein ES5_03818 [Dietzia cinnamea P4]
gi|319437886|gb|EFV92870.1| hypothetical protein ES5_03818 [Dietzia cinnamea P4]
Length=217
Score = 284 bits (726), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 146/217 (68%), Positives = 167/217 (77%), Gaps = 0/217 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
+T T+DC + R G+ SA GA++AG+LVV PTDT+YGI ADAFD AV LLSAK RG
Sbjct 1 MTITYDCTEDTGREVGLSSAAGALRAGRLVVTPTDTLYGIAADAFDPDAVNLLLSAKHRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
DMPV VLVGSW TI+GLV S P AR+LIRAFWPG LSL+V QAPSL W+LG GTVM
Sbjct 61 PDMPVPVLVGSWETIDGLVVSTPAPARDLIRAFWPGGLSLIVHQAPSLNWNLGHTRGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVAIELLREVGP+AVSSAN+SG PP QAR QLGD VAVYLD GP A
Sbjct 121 LRMPLHPVAIELLREVGPLAVSSANVSGQPPATTVAQAREQLGDSVAVYLDGGPCAIGAP 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASLFG 217
STIVD+TGA PR++R G V+ ER+ EVLG+D A+L G
Sbjct 181 STIVDITGAAPRIVREGAVTAERVGEVLGIDPAALRG 217
>gi|296138965|ref|YP_003646208.1| Sua5/YciO/YrdC/YwlC family protein [Tsukamurella paurometabola
DSM 20162]
gi|296027099|gb|ADG77869.1| Sua5/YciO/YrdC/YwlC family protein [Tsukamurella paurometabola
DSM 20162]
Length=216
Score = 281 bits (719), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 148/211 (71%), Positives = 164/211 (78%), Gaps = 0/211 (0%)
Query 5 FDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRGRDMP 64
+DC DP+ RS GI +A A+K G LVVMPTDT+YGIG DAFD+ AV LL+AK RG DMP
Sbjct 5 YDCTDPDSRSAGIAAARAALKGGHLVVMPTDTLYGIGCDAFDNRAVGDLLAAKHRGPDMP 64
Query 65 VGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVMLRMP 124
VGVLVGSW TI+GLV + AREL AFWPGA+SLVV QAPSL W+LGD GTVMLRMP
Sbjct 65 VGVLVGSWDTIDGLVSRVSPAARELTHAFWPGAVSLVVEQAPSLAWNLGDTRGTVMLRMP 124
Query 125 LHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAGSTIV 184
LHPVAIELLREVGPMAVSSAN+SG PP AR QLGD V VYLD GP+E STIV
Sbjct 125 LHPVAIELLREVGPMAVSSANVSGKPPAATMTDARDQLGDSVEVYLDGGPAEHAVASTIV 184
Query 185 DLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
DL+G PRVLR G V++ RIAEVLGVDA SL
Sbjct 185 DLSGPQPRVLREGAVTSARIAEVLGVDAQSL 215
>gi|226307402|ref|YP_002767362.1| hypothetical protein RER_39150 [Rhodococcus erythropolis PR4]
gi|229490001|ref|ZP_04383854.1| Sua5/YciO/YrdC/YwlC family protein [Rhodococcus erythropolis
SK121]
gi|226186519|dbj|BAH34623.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
gi|229323102|gb|EEN88870.1| Sua5/YciO/YrdC/YwlC family protein [Rhodococcus erythropolis
SK121]
Length=220
Score = 277 bits (708), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 143/215 (67%), Positives = 169/215 (79%), Gaps = 0/215 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
++ +DC+ + R+ G+ +A A+KAG+LVV+PTDT+YG+ ADAFDS AV +LL AKGRG
Sbjct 1 MSTVYDCSQTDSRTAGLAAAKNALKAGRLVVLPTDTLYGLAADAFDSEAVTSLLRAKGRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
RDMPV VLVGSW+TI+GLVYS+ AR+LIRAFWPG LSLVV QAPSL WDLGD GTVM
Sbjct 61 RDMPVPVLVGSWNTIDGLVYSVRPQARDLIRAFWPGGLSLVVEQAPSLAWDLGDTRGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVA+ELLR+VGP+AVSSANISG PP E+AR QLG +VYLD G +E
Sbjct 121 LRMPLHPVALELLRDVGPLAVSSANISGRPPATTVEEARDQLGGSASVYLDGGKAEHAVA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
STIVDLTG +PR+LR G VS E IAEVLG SL
Sbjct 181 STIVDLTGNSPRILRVGAVSAESIAEVLGTSPESL 215
>gi|38233637|ref|NP_939404.1| hypothetical protein DIP1043 [Corynebacterium diphtheriae NCTC
13129]
gi|38199897|emb|CAE49563.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length=216
Score = 276 bits (707), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/211 (65%), Positives = 161/211 (77%), Gaps = 0/211 (0%)
Query 5 FDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRGRDMP 64
FDC+D E R G+ A+ +K G+LVV+PTDT+YGIG DAFD++AVA LL K RG DMP
Sbjct 5 FDCSDAETREAGLQQAISTVKDGRLVVIPTDTLYGIGCDAFDNTAVAKLLETKHRGPDMP 64
Query 65 VGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVMLRMP 124
V VLVGSW T GLV+S D R LI AFWPG LS+VV QAPSLQW+LGD GTVMLRMP
Sbjct 65 VPVLVGSWDTARGLVHSYSDQLRTLIEAFWPGGLSIVVEQAPSLQWNLGDTRGTVMLRMP 124
Query 125 LHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAGSTIV 184
LHPVAIELLRE GPMAVSSANISG P A++A+ QLGD+V+VYLDAG + STI+
Sbjct 125 LHPVAIELLRETGPMAVSSANISGQTPATTAQEAQRQLGDNVSVYLDAGETPVGTASTII 184
Query 185 DLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
DL+G PR+LR G +S ER+AEVL VD +L
Sbjct 185 DLSGDHPRILREGAISAERVAEVLEVDVETL 215
>gi|134102725|ref|YP_001108386.1| SUA5/YciO/YrdC/YwlC [Saccharopolyspora erythraea NRRL 2338]
gi|291007818|ref|ZP_06565791.1| SUA5/YciO/YrdC/YwlC [Saccharopolyspora erythraea NRRL 2338]
gi|133915348|emb|CAM05461.1| SUA5/YciO/YrdC/YwlC [Saccharopolyspora erythraea NRRL 2338]
Length=216
Score = 275 bits (703), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 143/215 (67%), Positives = 171/215 (80%), Gaps = 0/215 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
++ +DC+ P+ R G+ +A A++AG LVV+PTDTVYGIGADAFDS+AVA+LL+AKGRG
Sbjct 1 MSTVYDCSRPDSRESGLAAAANAVRAGGLVVLPTDTVYGIGADAFDSNAVASLLAAKGRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
DMPV VLVGSW T++GLV S+P AR LI AFWPG LS+V+ QAPSL WDLG+ GTV
Sbjct 61 PDMPVPVLVGSWSTVDGLVMSVPQQARALIEAFWPGGLSIVLPQAPSLSWDLGNTRGTVN 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVA++LLREVGPMAVSSAN +GHPP A +AR QLGD V+VYLD GPS +
Sbjct 121 LRMPLHPVALDLLREVGPMAVSSANRTGHPPASTATEAREQLGDSVSVYLDGGPSGEPVA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
STIVDLT A PRVLR G V + +A+VLGVDA SL
Sbjct 181 STIVDLTQAQPRVLREGAVGLDDLADVLGVDAESL 215
>gi|25027862|ref|NP_737916.1| hypothetical protein CE1306 [Corynebacterium efficiens YS-314]
gi|259506253|ref|ZP_05749155.1| Sua5/YciO/YrdC/YwlC family protein [Corynebacterium efficiens
YS-314]
gi|23493145|dbj|BAC18116.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259166157|gb|EEW50711.1| Sua5/YciO/YrdC/YwlC family protein [Corynebacterium efficiens
YS-314]
Length=216
Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/215 (63%), Positives = 164/215 (77%), Gaps = 0/215 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
++ +DCADPE R G+ +AV A+KAGQLVV+PTDT+YG+G DAF++ AVA LL+ K RG
Sbjct 1 MSRVYDCADPESRVAGLKAAVDAVKAGQLVVLPTDTLYGLGCDAFNNQAVANLLATKHRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
DMPV VLVGSW TI+GLV + AR L++AFWPG LS++V QAPSL W+LGD GTVM
Sbjct 61 PDMPVPVLVGSWDTIQGLVQHYSEQARTLVQAFWPGGLSIIVPQAPSLPWNLGDTRGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVAIELLRE GPMAVSSANISGH PP +AR QL +V+VYLD G
Sbjct 121 LRMPLHPVAIELLRETGPMAVSSANISGHTPPSTVTEARQQLNQNVSVYLDGGECAIGKP 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
S+I+D++G P++LR G +S ERI EVLGV A SL
Sbjct 181 SSIIDISGPHPKLLREGAISAERIGEVLGVTAESL 215
>gi|19552426|ref|NP_600428.1| putative translation factor (SUA5) [Corynebacterium glutamicum
ATCC 13032]
gi|62390090|ref|YP_225492.1| translation factor (SUA5) [Corynebacterium glutamicum ATCC 13032]
gi|21323969|dbj|BAB98595.1| Putative translation factor (SUA5) [Corynebacterium glutamicum
ATCC 13032]
gi|41325426|emb|CAF19906.1| Putative translation factor (SUA5) [Corynebacterium glutamicum
ATCC 13032]
Length=216
Score = 272 bits (696), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/215 (63%), Positives = 164/215 (77%), Gaps = 0/215 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
++ +DCAD + R+ G+ +AV A+KAGQLVV+PTDT+YG+G DAF++ AVA LL+ K RG
Sbjct 1 MSRIYDCADQDSRAAGLKAAVDAVKAGQLVVLPTDTLYGLGCDAFNNEAVANLLATKHRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
DMPV VLVGSW TI+GLV+S A+ L+ AFWPG LS++V QAPSL W+LGD GTVM
Sbjct 61 PDMPVPVLVGSWDTIQGLVHSYSAQAKALVEAFWPGGLSIIVPQAPSLPWNLGDTRGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVAIELLR+ GPMAVSSANISGH PP +AR QL +VAVYLD G
Sbjct 121 LRMPLHPVAIELLRQTGPMAVSSANISGHTPPTTVLEARQQLNQNVAVYLDGGECALATP 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
STIVD++G P++LR G +S ER+ EVLGV A SL
Sbjct 181 STIVDISGPAPKILREGAISAERVGEVLGVSAESL 215
>gi|337290512|ref|YP_004629533.1| hypothetical protein CULC22_00901 [Corynebacterium ulcerans BR-AD22]
gi|334698818|gb|AEG83614.1| hypothetical protein CULC22_00901 [Corynebacterium ulcerans BR-AD22]
Length=216
Score = 272 bits (696), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/215 (64%), Positives = 161/215 (75%), Gaps = 0/215 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
++ +DC+D R+ + A A+K G+LVVMPTDT+YGIG DAFD++AVA LL+ K RG
Sbjct 1 MSRIYDCSDANIRNAALKVASDAVKDGRLVVMPTDTLYGIGCDAFDNNAVAKLLATKHRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
DMPV VLVGSW T GLV+S + R LI AFWPGALS+VV QAPSLQW+LGD GTVM
Sbjct 61 PDMPVPVLVGSWDTARGLVHSYSEQMRTLIEAFWPGALSIVVAQAPSLQWNLGDTRGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVAIELLRE GPMAVSSANISG PP A A+ QLGD V+ YLD G +
Sbjct 121 LRMPLHPVAIELLRETGPMAVSSANISGQKPPTTALAAQEQLGDAVSAYLDGGATPVGTA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
STI+DL+G TPR+LR G +S ERIAEVL +D +L
Sbjct 181 STIIDLSGPTPRILREGAISAERIAEVLNLDVETL 215
>gi|333989940|ref|YP_004522554.1| hypothetical protein JDM601_1300 [Mycobacterium sp. JDM601]
gi|333485908|gb|AEF35300.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=219
Score = 272 bits (696), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/217 (70%), Positives = 177/217 (82%), Gaps = 0/217 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
+TE FDCAD QR+ GI +A+ A++ G+L V+PTDTVYG+GADAF+ + V ALL+AK RG
Sbjct 1 MTEVFDCADAAQRAAGIAAAIDAVRGGRLAVLPTDTVYGVGADAFNVAGVTALLAAKRRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
RDMPVGVLVGSW++I+GL +PD ARELIRAFWPGALS++V QAPSLQWDLGDA GTVM
Sbjct 61 RDMPVGVLVGSWNSIDGLALVVPDTARELIRAFWPGALSVIVNQAPSLQWDLGDARGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
+RMPLHPVA+E+L VGPMAVSSANISG P VDA A QLG+ V VYLDAGP+EQ A
Sbjct 121 VRMPLHPVALEVLTAVGPMAVSSANISGGAPAVDAAAAHRQLGETVDVYLDAGPAEQGAA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASLFG 217
STIVDLTG PR++R GPVS E+I VLG D A+L G
Sbjct 181 STIVDLTGPAPRIVRTGPVSAEQIGAVLGQDPAALTG 217
>gi|334696625|gb|AEG81422.1| hypothetical protein CULC809_00886 [Corynebacterium ulcerans
809]
Length=216
Score = 272 bits (695), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 136/215 (64%), Positives = 161/215 (75%), Gaps = 0/215 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
++ +DC+D R+ + A A+K G+LVVMPTDT+YGIG DAFD++AVA LL+ K RG
Sbjct 1 MSRIYDCSDANIRNAALKVASDAVKDGRLVVMPTDTLYGIGCDAFDNNAVAKLLATKHRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
DMPV VLVGSW T GLV+S + R LI AFWPGALS+VV QAPSLQW+LGD GTVM
Sbjct 61 PDMPVPVLVGSWDTARGLVHSYSEQMRTLIEAFWPGALSIVVAQAPSLQWNLGDTRGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVAIELLRE GPMAVSSANISG PP A A+ QLGD V+ YLD G +
Sbjct 121 LRMPLHPVAIELLRETGPMAVSSANISGQKPPTTALAAQEQLGDAVSAYLDGGATPVGTA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
STI+DL+G TPR+LR G +S ERIAEVL +D +L
Sbjct 181 STIIDLSGPTPRILREGAISAERIAEVLSLDVETL 215
>gi|333920924|ref|YP_004494505.1| Sua5/YciO/YrdC/YwlC family protein [Amycolicicoccus subflavus
DQS3-9A1]
gi|333483145|gb|AEF41705.1| Sua5/YciO/YrdC/YwlC family protein [Amycolicicoccus subflavus
DQS3-9A1]
Length=220
Score = 272 bits (695), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 140/216 (65%), Positives = 159/216 (74%), Gaps = 0/216 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
++ +DC E R GI +AV A++AG+LVV+PTDTVYGIG DAFDS AV ALL+AKGRG
Sbjct 1 MSTVYDCTSSESRETGIAAAVQAVRAGRLVVLPTDTVYGIGCDAFDSHAVGALLAAKGRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
R+MPV VLVGSW TI+GLV S+P R L+ AFWPG LS+VV APSL WDLG GTVM
Sbjct 61 REMPVPVLVGSWTTIDGLVLSVPTRTRALVEAFWPGGLSIVVEHAPSLSWDLGYTRGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHP+A+E+LREVGPM VSSAN SGH P A A QLGD VAVYLD G S+
Sbjct 121 LRMPLHPIALEVLREVGPMGVSSANKSGHRPATSAADAEGQLGDSVAVYLDGGESQFGVA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASLF 216
STIVDLTG TPRVLR G V IAEVLG+ L
Sbjct 181 STIVDLTGETPRVLREGAVQLGAIAEVLGMQPDELL 216
>gi|257056937|ref|YP_003134769.1| translation factor SUA5 [Saccharomonospora viridis DSM 43017]
gi|256586809|gb|ACU97942.1| translation factor SUA5 [Saccharomonospora viridis DSM 43017]
Length=216
Score = 271 bits (692), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 132/211 (63%), Positives = 164/211 (78%), Gaps = 0/211 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
++ +DC+DP R+ G+ +A+ A+++G+LVV+PTDTVYGIGADAFD++AV ALL AK RG
Sbjct 1 MSAVYDCSDPHARADGLKAAISAVRSGRLVVLPTDTVYGIGADAFDATAVRALLQAKNRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
DMPVGVLVGSW T++GLV + AR LI AFWPG LS+VV APSL W+LG GTVM
Sbjct 61 PDMPVGVLVGSWSTVDGLVLGLSQEARTLIEAFWPGDLSIVVSHAPSLHWNLGTTRGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVA+E+LREVGPMAVSSAN+SG PP ++A+ QLG+ VAVYLD GPS
Sbjct 121 LRMPLHPVALEVLREVGPMAVSSANVSGQPPASTMQEAKEQLGESVAVYLDGGPSGDPVP 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVD 211
STIVDLTG P +LR G VS E ++E LG++
Sbjct 181 STIVDLTGEKPSLLREGAVSAEAVSEALGME 211
>gi|306835873|ref|ZP_07468868.1| Sua5/YciO/YrdC/YwlC family protein [Corynebacterium accolens
ATCC 49726]
gi|304568238|gb|EFM43808.1| Sua5/YciO/YrdC/YwlC family protein [Corynebacterium accolens
ATCC 49726]
Length=222
Score = 270 bits (691), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 135/213 (64%), Positives = 161/213 (76%), Gaps = 0/213 (0%)
Query 3 ETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRGRD 62
+ ++CAD +R G+ A A K+G+LVVMPTDT+YG+G DAFD+ AVA LL+ K RG D
Sbjct 4 KIYNCADDTEREEGVSIATKAAKSGRLVVMPTDTLYGLGCDAFDNDAVANLLATKQRGPD 63
Query 63 MPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVMLR 122
MPV VLVGSW+T+ GLV S PD R+L+ AFWPG LS+VV QAPSL W+LGD GTVMLR
Sbjct 64 MPVPVLVGSWNTVRGLVASYPDSTRDLVEAFWPGGLSIVVPQAPSLPWNLGDTRGTVMLR 123
Query 123 MPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAGST 182
MPLHP+AIELLREVGPMAVSSANISGH PP A+ A+ QLG V VYLD G ++ ST
Sbjct 124 MPLHPIAIELLREVGPMAVSSANISGHQPPTTAQMAKDQLGKAVTVYLDGGETDIGKPST 183
Query 183 IVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
I+DL+G P +LR G +S E I EVLGV A SL
Sbjct 184 IIDLSGDHPYLLREGALSAEEIGEVLGVSADSL 216
>gi|227501696|ref|ZP_03931745.1| Sua5/YciO/YrdC/YwlC family protein [Corynebacterium accolens
ATCC 49725]
gi|227077721|gb|EEI15684.1| Sua5/YciO/YrdC/YwlC family protein [Corynebacterium accolens
ATCC 49725]
Length=222
Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 135/213 (64%), Positives = 161/213 (76%), Gaps = 0/213 (0%)
Query 3 ETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRGRD 62
+ ++CAD +R G+ A A K+G+LVVMPTDT+YG+G DAFD+ AVA LL+ K RG D
Sbjct 4 KIYNCADDAEREEGVSIATKAAKSGRLVVMPTDTLYGLGCDAFDNDAVANLLATKQRGPD 63
Query 63 MPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVMLR 122
MPV VLVGSW+T+ GLV S PD R+L+ AFWPG LS+VV QAPSL W+LGD GTVMLR
Sbjct 64 MPVPVLVGSWNTVRGLVASYPDSTRDLVEAFWPGGLSIVVPQAPSLPWNLGDTRGTVMLR 123
Query 123 MPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAGST 182
MPLHP+AIELLREVGPMAVSSANISGH PP A+ A+ QLG V VYLD G ++ ST
Sbjct 124 MPLHPIAIELLREVGPMAVSSANISGHQPPTTAQMAKDQLGKAVTVYLDGGETDIGKPST 183
Query 183 IVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
I+DL+G P +LR G +S E I EVLGV A SL
Sbjct 184 IIDLSGDHPYLLREGALSAEEIGEVLGVSADSL 216
>gi|145295341|ref|YP_001138162.1| hypothetical protein cgR_1281 [Corynebacterium glutamicum R]
gi|140845261|dbj|BAF54260.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344045686|gb|EGV41356.1| hypothetical protein CgS9114_03178 [Corynebacterium glutamicum
S9114]
Length=216
Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/215 (62%), Positives = 164/215 (77%), Gaps = 0/215 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
++ +DCAD + R+ G+ +AV A+KAGQLVV+PTDT+YG+G DAF++ AVA LL+ K RG
Sbjct 1 MSRIYDCADQDSRAAGLKAAVDAVKAGQLVVLPTDTLYGLGCDAFNNEAVANLLATKHRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
DMPV VLVGSW TI+GLV+S A+ L+ AFWPG LS++V QAPSL W+LGD GTVM
Sbjct 61 PDMPVPVLVGSWDTIQGLVHSYSAQAKALVEAFWPGGLSIIVPQAPSLPWNLGDTRGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVAIELLR+ GPMAVSSANISGH PP +AR QL +V+VYLD G
Sbjct 121 LRMPLHPVAIELLRQTGPMAVSSANISGHTPPSTVLEARQQLNQNVSVYLDGGECAIGKP 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
STIVD++G P++LR G +S ER+ EVLGV A SL
Sbjct 181 STIVDISGPAPKILREGAISAERVGEVLGVSAESL 215
>gi|255324518|ref|ZP_05365635.1| Sua5/YciO/YrdC/YwlC family protein [Corynebacterium tuberculostearicum
SK141]
gi|255298424|gb|EET77724.1| Sua5/YciO/YrdC/YwlC family protein [Corynebacterium tuberculostearicum
SK141]
Length=222
Score = 267 bits (682), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 135/213 (64%), Positives = 160/213 (76%), Gaps = 0/213 (0%)
Query 3 ETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRGRD 62
+ F+CAD +R G+ AV A ++G+LVVMPTDT+YG+G DAFD+ AVA LL+ K RG D
Sbjct 4 KIFNCADDAEREEGMNIAVKAAQSGRLVVMPTDTLYGLGCDAFDNDAVANLLATKQRGPD 63
Query 63 MPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVMLR 122
MPV VLVGSW T+ GLV S D AR+L+ AFWPG LS+VV QAPSL W+LGD GTVMLR
Sbjct 64 MPVPVLVGSWDTVRGLVASYTDTARDLVEAFWPGGLSIVVPQAPSLPWNLGDTRGTVMLR 123
Query 123 MPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAGST 182
MPLHP+AIELLREVGPMAVSSANISGH PP A A+ QLG V VYLD G + ST
Sbjct 124 MPLHPIAIELLREVGPMAVSSANISGHQPPTTALMAKQQLGKAVTVYLDGGETAVGKPST 183
Query 183 IVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
I+DL+G P +LR G +S E I EV+GVDA +L
Sbjct 184 IIDLSGERPYLLREGALSAEEIGEVIGVDAQTL 216
>gi|289569313|ref|ZP_06449540.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289543067|gb|EFD46715.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=136
Score = 267 bits (682), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 135/136 (99%), Positives = 135/136 (99%), Gaps = 0/136 (0%)
Query 82 MPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVMLRMPLHPVAIELLREVGPMAV 141
MPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVMLRMPLHPVAIELLREVGPMAV
Sbjct 1 MPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVMLRMPLHPVAIELLREVGPMAV 60
Query 142 SSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAGSTIVDLTGATPRVLRPGPVST 201
SSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAGSTIVDLTGATPRVLR GPVST
Sbjct 61 SSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAGSTIVDLTGATPRVLRQGPVST 120
Query 202 ERIAEVLGVDAASLFG 217
ERIAEVLGVDAASLFG
Sbjct 121 ERIAEVLGVDAASLFG 136
>gi|311740612|ref|ZP_07714439.1| Sua5/YciO/YrdC/YwlC family protein [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311304132|gb|EFQ80208.1| Sua5/YciO/YrdC/YwlC family protein [Corynebacterium pseudogenitalium
ATCC 33035]
Length=223
Score = 266 bits (681), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/213 (63%), Positives = 160/213 (76%), Gaps = 0/213 (0%)
Query 3 ETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRGRD 62
+ F+CA+ +R G+ AV A ++G+LVVMPTDT+YG+G DAFD+ AVA LL+ K RG D
Sbjct 5 KIFNCANDAEREEGMNIAVKAAQSGRLVVMPTDTLYGLGCDAFDNDAVANLLATKQRGPD 64
Query 63 MPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVMLR 122
MPV VLVGSW T+ GLV S D AR+L+ AFWPG LS+VV QAPSL W+LGD GTVMLR
Sbjct 65 MPVPVLVGSWDTVRGLVASYTDTARDLVEAFWPGGLSIVVPQAPSLPWNLGDTRGTVMLR 124
Query 123 MPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAGST 182
MPLHP+AIELLREVGPMAVSSANISGH PP A A+ QLG V VYLD G + ST
Sbjct 125 MPLHPIAIELLREVGPMAVSSANISGHQPPTTALMAKQQLGKAVTVYLDGGETAVGKPST 184
Query 183 IVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
I+DL+G P +LR G +S E I EV+GVDA +L
Sbjct 185 IIDLSGECPYLLREGALSAEEIGEVIGVDAQTL 217
>gi|300789603|ref|YP_003769894.1| SUA5/YciO/YrdC/YwlC family protein [Amycolatopsis mediterranei
U32]
gi|299799117|gb|ADJ49492.1| SUA5/YciO/YrdC/YwlC family protein [Amycolatopsis mediterranei
U32]
gi|340531259|gb|AEK46464.1| SUA5/YciO/YrdC/YwlC family protein [Amycolatopsis mediterranei
S699]
Length=216
Score = 266 bits (680), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/215 (66%), Positives = 168/215 (79%), Gaps = 0/215 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
++ +DC+ E R+ G+ +A GA+++ +LVV+PTDTVYGIGADAFD+ AV ALL AK RG
Sbjct 1 MSVVYDCSKRETRADGLAAAAGAVRSSRLVVLPTDTVYGIGADAFDAGAVQALLRAKNRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
DMPVGVLVGSW T++GLV +P AR LI AFWPG LS+V+ APSLQW+LGDA GTVM
Sbjct 61 PDMPVGVLVGSWSTVDGLVLGVPPQARALIEAFWPGDLSIVLPHAPSLQWNLGDARGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVA+ELLR+VGPMAVSSAN+SG PP A++A+ QLGD VAVYLD G S +
Sbjct 121 LRMPLHPVALELLRDVGPMAVSSANVSGRPPASTAQEAQEQLGDSVAVYLDGGSSGEAVA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
S+IVDLTG P VLR G V E IAEVLGV A SL
Sbjct 181 SSIVDLTGTEPVVLREGAVGKEAIAEVLGVPAESL 215
>gi|325002822|ref|ZP_08123934.1| translation factor SUA5 [Pseudonocardia sp. P1]
Length=220
Score = 266 bits (680), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/205 (66%), Positives = 156/205 (77%), Gaps = 0/205 (0%)
Query 5 FDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRGRDMP 64
FDC P +R RG+ +A A+++G+LVV+PTDTVYGIG DAF +AV LLSAK RG DMP
Sbjct 10 FDCGRPAERQRGLTAAARAVRSGELVVLPTDTVYGIGCDAFSGTAVRNLLSAKRRGPDMP 69
Query 65 VGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVMLRMP 124
VGVLVGSW TI+GLV S+P AR LI AFWPG +SLV+ APSL WDLG GTVMLRMP
Sbjct 70 VGVLVGSWTTIDGLVTSVPPSARALIEAFWPGEVSLVLEHAPSLAWDLGSTRGTVMLRMP 129
Query 125 LHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAGSTIV 184
LHPVA+ELLREVGPMAVSSAN SG+PP +A +QL V VYLD GPS STIV
Sbjct 130 LHPVALELLREVGPMAVSSANTSGNPPASTVTEAITQLASSVQVYLDGGPSGDPVASTIV 189
Query 185 DLTGATPRVLRPGPVSTERIAEVLG 209
DLTG PR+LR G VS E++AEV+G
Sbjct 190 DLTGVRPRLLREGGVSAEQVAEVVG 214
>gi|227832891|ref|YP_002834598.1| hypothetical protein cauri_1065 [Corynebacterium aurimucosum
ATCC 700975]
gi|262182620|ref|ZP_06042041.1| hypothetical protein CaurA7_01395 [Corynebacterium aurimucosum
ATCC 700975]
gi|227453907|gb|ACP32660.1| hypothetical protein cauri_1065 [Corynebacterium aurimucosum
ATCC 700975]
Length=225
Score = 265 bits (678), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 135/213 (64%), Positives = 162/213 (77%), Gaps = 0/213 (0%)
Query 3 ETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRGRD 62
+ ++CAD +R G+ AV A K+G+LVVMPTDT+YG+G DAFD+ AVA+LL+ K RG D
Sbjct 4 QIYNCADAAEREEGMALAVKAAKSGRLVVMPTDTLYGLGCDAFDNDAVASLLATKHRGPD 63
Query 63 MPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVMLR 122
MPV VLVGSW T++GLV S+ D A+ LI AFWPG LS+VV QAPSL W+LGD GTVMLR
Sbjct 64 MPVPVLVGSWDTVKGLVASLDDTAQTLIEAFWPGGLSIVVPQAPSLPWNLGDTRGTVMLR 123
Query 123 MPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAGST 182
MPLHP+AIELLREVGPMAVSSANISG PP A A+ QLG V VYLD G +E ST
Sbjct 124 MPLHPIAIELLREVGPMAVSSANISGQTPPTTAIAAKQQLGKAVTVYLDGGEAEVGKPST 183
Query 183 IVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
I+DL+G P +LR G +S E+I EV+GV A SL
Sbjct 184 IIDLSGPHPYLLREGALSAEQIGEVIGVSAESL 216
>gi|300858258|ref|YP_003783241.1| hypothetical protein cpfrc_00840 [Corynebacterium pseudotuberculosis
FRC41]
gi|300685712|gb|ADK28634.1| hypothetical protein cpfrc_00840 [Corynebacterium pseudotuberculosis
FRC41]
gi|302205979|gb|ADL10321.1| tRNA threonylcarbamoyladenosine biosynthesis protein YwlC [Corynebacterium
pseudotuberculosis C231]
gi|302330532|gb|ADL20726.1| tRNA threonylcarbamoyladenosine biosynthesis protein YwlC [Corynebacterium
pseudotuberculosis 1002]
gi|308276214|gb|ADO26113.1| Putative translation factor SUA5 [Corynebacterium pseudotuberculosis
I19]
gi|341824648|gb|AEK92169.1| tRNA threonylcarbamoyladenosine biosynthesis protein YwlC [Corynebacterium
pseudotuberculosis PAT10]
Length=216
Score = 265 bits (678), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 132/211 (63%), Positives = 158/211 (75%), Gaps = 0/211 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
++ +DC+D R+ + A A+K G+LVVMPTDT+YGIG DAFD++AVA LL+ K RG
Sbjct 1 MSRIYDCSDASIRNAALKVASDAVKDGRLVVMPTDTLYGIGCDAFDNNAVAKLLTTKQRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
DMPV VLVGSW T GLV+S + R LI AFWPGALS+VV QAPSLQW+LGD GTVM
Sbjct 61 PDMPVPVLVGSWDTARGLVHSYSEQMRTLIEAFWPGALSIVVAQAPSLQWNLGDTRGTVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPLHPVAIELLRE GPMAVSSAN+SG P A A+ QLGD V+ YLD G +
Sbjct 121 LRMPLHPVAIELLRETGPMAVSSANVSGQKPATTALAAQEQLGDAVSAYLDGGATPVGTA 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVD 211
STI+DL+G +PR+LR G +S ERIAEVL +D
Sbjct 181 STIIDLSGPSPRILREGAISAERIAEVLDLD 211
>gi|227503860|ref|ZP_03933909.1| Sua5/YciO/YrdC/YwlC family protein [Corynebacterium striatum
ATCC 6940]
gi|227199483|gb|EEI79531.1| Sua5/YciO/YrdC/YwlC family protein [Corynebacterium striatum
ATCC 6940]
Length=222
Score = 264 bits (675), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 135/213 (64%), Positives = 159/213 (75%), Gaps = 0/213 (0%)
Query 3 ETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRGRD 62
+ ++CAD +R G+ AV A K+G+LVVMPTDT+YG+G DAFD+ AVA+LL+ K RG D
Sbjct 4 KIYNCADQAEREEGMALAVKAAKSGRLVVMPTDTLYGLGCDAFDNDAVASLLATKHRGPD 63
Query 63 MPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVMLR 122
MPV VLVGSW TI GLV S D AR L+ AFWPG LS+VV QAPSL W+LGD GTVMLR
Sbjct 64 MPVPVLVGSWDTIRGLVASYTDTARTLVEAFWPGGLSIVVPQAPSLPWNLGDTRGTVMLR 123
Query 123 MPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAGST 182
MPLHP+AIELLREVGPMAVSSANISG PP A +A+ QLG V VYLD G + ST
Sbjct 124 MPLHPIAIELLREVGPMAVSSANISGQTPPTTALEAKQQLGKAVTVYLDGGETAIGKPST 183
Query 183 IVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
I+DL+G P +LR G +S E IA V+GV A SL
Sbjct 184 IIDLSGERPYLLREGALSAEEIAAVIGVTAESL 216
>gi|296119523|ref|ZP_06838081.1| Sua5/YciO/YrdC/YwlC family protein [Corynebacterium ammoniagenes
DSM 20306]
gi|295967406|gb|EFG80673.1| Sua5/YciO/YrdC/YwlC family protein [Corynebacterium ammoniagenes
DSM 20306]
Length=235
Score = 262 bits (670), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/213 (63%), Positives = 160/213 (76%), Gaps = 0/213 (0%)
Query 3 ETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRGRD 62
+ +DC+D +QR+ GI A A K+G+L+V PTDTVYG+G DAFD+ AVA+LL+AK RG D
Sbjct 4 KIYDCSDEQQRAEGIALATKAAKSGRLIVTPTDTVYGLGCDAFDNDAVASLLAAKHRGPD 63
Query 63 MPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVMLR 122
MPV VL+GSW T +GLV S D + L AFWPG LS+VV QAPSL W+LGD GTVMLR
Sbjct 64 MPVPVLIGSWDTAKGLVQSFTDQMKLLTEAFWPGGLSIVVPQAPSLPWNLGDTRGTVMLR 123
Query 123 MPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAGST 182
MPLHP+AIELLREVGPMAVSSANISGH P A A+ QLG VAVYLD G + ST
Sbjct 124 MPLHPIAIELLREVGPMAVSSANISGHAPATTAIAAKQQLGKAVAVYLDGGEAPIGEPST 183
Query 183 IVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
I+DL+G P +LR G +S ERI+EV+GVDA L
Sbjct 184 IIDLSGPWPYLLREGALSAERISEVIGVDAQRL 216
>gi|237785866|ref|YP_002906571.1| hypothetical protein ckrop_1283 [Corynebacterium kroppenstedtii
DSM 44385]
gi|237758778|gb|ACR18028.1| conserved hypothetical protein [Corynebacterium kroppenstedtii
DSM 44385]
Length=218
Score = 261 bits (668), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 132/215 (62%), Positives = 160/215 (75%), Gaps = 0/215 (0%)
Query 1 LTETFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFDSSAVAALLSAKGRG 60
++ +DC D ++R RG+ +A A+K G+LVV+PTDTVYGIG DAFD+ AVAALL AK RG
Sbjct 1 MSTIYDCTDQDERRRGLEAAQSAVKGGRLVVIPTDTVYGIGCDAFDNDAVAALLRAKHRG 60
Query 61 RDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPGALSLVVVQAPSLQWDLGDAHGTVM 120
DMPV VLVGSW T++GLV ++ REL++AFWPG LS VV QAPSL WDLGD +G+VM
Sbjct 61 PDMPVPVLVGSWDTVDGLVQTVTPRMRELVQAFWPGGLSFVVTQAPSLPWDLGDTNGSVM 120
Query 121 LRMPLHPVAIELLREVGPMAVSSANISGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAG 180
LRMPL PVAIELLR GPMAVSSANISG PP A A+ LG V+VYLD G +
Sbjct 121 LRMPLQPVAIELLRATGPMAVSSANISGQPPATSAIAAKQMLGSEVSVYLDDGEATIGEP 180
Query 181 STIVDLTGATPRVLRPGPVSTERIAEVLGVDAASL 215
STI+DLT TP +LR G +S ERI+EV+G A+L
Sbjct 181 STIIDLTSPTPHLLREGAISAERISEVIGTSPATL 215
Lambda K H
0.317 0.135 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 263865364408
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40