BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1304
Length=250
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608444|ref|NP_215820.1| F0F1 ATP synthase subunit A [Mycoba... 501 3e-140
gi|289442743|ref|ZP_06432487.1| ATP synthase F0, A subunit [Myco... 499 2e-139
gi|183984064|ref|YP_001852355.1| ATP synthase a chain AtpB [Myco... 474 4e-132
gi|289569316|ref|ZP_06449543.1| LOW QUALITY PROTEIN: ATP synthas... 471 3e-131
gi|240169510|ref|ZP_04748169.1| F0F1 ATP synthase subunit A [Myc... 467 6e-130
gi|118619164|ref|YP_907496.1| F0F1 ATP synthase subunit A [Mycob... 467 6e-130
gi|296170245|ref|ZP_06851838.1| ATP synthase F0 sector subunit A... 440 8e-122
gi|118462240|ref|YP_880760.1| F0F1 ATP synthase subunit A [Mycob... 436 2e-120
gi|41408555|ref|NP_961391.1| F0F1 ATP synthase subunit A [Mycoba... 434 6e-120
gi|254821303|ref|ZP_05226304.1| F0F1 ATP synthase subunit A [Myc... 431 6e-119
gi|342858035|ref|ZP_08714691.1| F0F1 ATP synthase subunit A [Myc... 430 1e-118
gi|15827570|ref|NP_301833.1| F0F1 ATP synthase subunit A [Mycoba... 412 2e-113
gi|108800846|ref|YP_641043.1| F0F1 ATP synthase subunit A [Mycob... 396 1e-108
gi|333989943|ref|YP_004522557.1| ATP synthase a chain AtpB [Myco... 391 5e-107
gi|169628538|ref|YP_001702187.1| F0F1 ATP synthase subunit A [My... 375 3e-102
gi|120405288|ref|YP_955117.1| F0F1 ATP synthase subunit A [Mycob... 374 1e-101
gi|118469891|ref|YP_889194.1| F0F1 ATP synthase subunit A [Mycob... 370 1e-100
gi|145222900|ref|YP_001133578.1| F0F1 ATP synthase subunit A [My... 369 2e-100
gi|262201854|ref|YP_003273062.1| ATP synthase F0 subunit A [Gord... 351 5e-95
gi|317506172|ref|ZP_07963993.1| ATP synthase subunit A protein [... 337 1e-90
gi|296393122|ref|YP_003658006.1| ATP synthase F0 subunit A [Segn... 325 5e-87
gi|343928065|ref|ZP_08767530.1| ATP synthase subunit a [Gordonia... 308 4e-82
gi|296138976|ref|YP_003646219.1| ATP synthase F0 subunit alpha [... 282 3e-74
gi|117927855|ref|YP_872406.1| F0F1 ATP synthase subunit A [Acido... 220 1e-55
gi|331695527|ref|YP_004331766.1| ATP synthase subunit a [Pseudon... 189 5e-46
gi|320529510|ref|ZP_08030595.1| ATP synthase F0, A subunit [Sele... 135 7e-30
gi|313897019|ref|ZP_07830566.1| ATP synthase F0, A subunit [Sele... 134 1e-29
gi|62262049|gb|AAX78040.1| unknown protein [synthetic construct] 125 5e-27
gi|89257064|ref|YP_514426.1| F0F1 ATP synthase subunit A [Franci... 125 6e-27
gi|156503274|ref|YP_001429339.1| F0F1 ATP synthase subunit A [Fr... 125 6e-27
gi|56707237|ref|YP_169133.1| F0F1 ATP synthase subunit A [Franci... 125 7e-27
gi|118498214|ref|YP_899264.1| F0F1 ATP synthase subunit A [Franc... 125 8e-27
gi|332184767|gb|AEE27021.1| ATP synthase A chain [Francisella cf... 125 8e-27
gi|254369901|ref|ZP_04985910.1| ATP synthase A chain [Francisell... 124 1e-26
gi|187931014|ref|YP_001890998.1| F0F1 ATP synthase subunit A [Fr... 124 1e-26
gi|254375022|ref|ZP_04990502.1| hypothetical protein FTDG_01210 ... 124 2e-26
gi|134301272|ref|YP_001121240.1| F0F1 ATP synthase subunit A [Fr... 123 2e-26
gi|338812426|ref|ZP_08624602.1| ATP synthase F0, A subunit [Acet... 122 4e-26
gi|254876286|ref|ZP_05248996.1| F0F1 ATP synthase subunit A [Fra... 122 6e-26
gi|258517240|ref|YP_003193462.1| ATP synthase F0, A subunit [Des... 121 7e-26
gi|337754574|ref|YP_004647085.1| ATP synthase subunit A [Francis... 121 1e-25
gi|167627180|ref|YP_001677680.1| F0F1 ATP synthase subunit A [Fr... 120 2e-25
gi|90413748|ref|ZP_01221736.1| ATP synthase subunit A [Photobact... 119 5e-25
gi|134300987|ref|YP_001114483.1| ATP synthase F0 subunit A [Desu... 118 7e-25
gi|313891472|ref|ZP_07825088.1| ATP synthase F0, A subunit [Dial... 117 1e-24
gi|330447614|ref|ZP_08311262.1| ATP synthase F0, A subunit [Phot... 116 2e-24
gi|292670137|ref|ZP_06603563.1| H(+)-transporting two-sector ATP... 116 3e-24
gi|269104948|ref|ZP_06157644.1| ATP synthase A chain [Photobacte... 116 4e-24
gi|261253527|ref|ZP_05946100.1| ATP synthase A chain [Vibrio ori... 115 5e-24
gi|220932623|ref|YP_002509531.1| ATP synthase F0 subunit A [Halo... 115 7e-24
>gi|15608444|ref|NP_215820.1| F0F1 ATP synthase subunit A [Mycobacterium tuberculosis H37Rv]
gi|15840755|ref|NP_335792.1| F0F1 ATP synthase subunit A [Mycobacterium tuberculosis CDC1551]
gi|31792497|ref|NP_854990.1| F0F1 ATP synthase subunit A [Mycobacterium bovis AF2122/97]
74 more sequence titles
Length=250
Score = 501 bits (1290), Expect = 3e-140, Method: Compositional matrix adjust.
Identities = 250/250 (100%), Positives = 250/250 (100%), Gaps = 0/250 (0%)
Query 1 MTETILAAQIEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGV 60
MTETILAAQIEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGV
Sbjct 1 MTETILAAQIEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGV 60
Query 61 QLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTE 120
QLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTE
Sbjct 61 QLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTE 120
Query 121 LLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKP 180
LLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKP
Sbjct 121 LLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKP 180
Query 181 ISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILYFS 240
ISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILYFS
Sbjct 181 ISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILYFS 240
Query 241 QAMELEEEHH 250
QAMELEEEHH
Sbjct 241 QAMELEEEHH 250
>gi|289442743|ref|ZP_06432487.1| ATP synthase F0, A subunit [Mycobacterium tuberculosis T46]
gi|289749858|ref|ZP_06509236.1| F-ATPase 6 [Mycobacterium tuberculosis T92]
gi|289749861|ref|ZP_06509239.1| ATP synthase subunit A atpB [Mycobacterium tuberculosis T92]
gi|289415662|gb|EFD12902.1| ATP synthase F0, A subunit [Mycobacterium tuberculosis T46]
gi|289690445|gb|EFD57874.1| F-ATPase 6 [Mycobacterium tuberculosis T92]
gi|289690448|gb|EFD57877.1| ATP synthase subunit A atpB [Mycobacterium tuberculosis T92]
Length=250
Score = 499 bits (1285), Expect = 2e-139, Method: Compositional matrix adjust.
Identities = 249/250 (99%), Positives = 249/250 (99%), Gaps = 0/250 (0%)
Query 1 MTETILAAQIEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGV 60
MTETILAAQIEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGV
Sbjct 1 MTETILAAQIEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGV 60
Query 61 QLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTE 120
QLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTE
Sbjct 61 QLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTE 120
Query 121 LLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKP 180
LLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKP
Sbjct 121 LLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKP 180
Query 181 ISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILYFS 240
ISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDL VGAIQAFIFALLTILYFS
Sbjct 181 ISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLLVGAIQAFIFALLTILYFS 240
Query 241 QAMELEEEHH 250
QAMELEEEHH
Sbjct 241 QAMELEEEHH 250
>gi|183984064|ref|YP_001852355.1| ATP synthase a chain AtpB [Mycobacterium marinum M]
gi|226739809|sp|B2HQK8.1|ATP6_MYCMM RecName: Full=ATP synthase subunit a; AltName: Full=ATP synthase
F0 sector subunit a; AltName: Full=F-ATPase subunit 6
gi|183177390|gb|ACC42500.1| ATP synthase a chain AtpB [Mycobacterium marinum M]
Length=250
Score = 474 bits (1221), Expect = 4e-132, Method: Compositional matrix adjust.
Identities = 234/250 (94%), Positives = 243/250 (98%), Gaps = 0/250 (0%)
Query 1 MTETILAAQIEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGV 60
MTE+ILAAQIEVGEHHTATWLGMTVNTDTVLSTAIA LIV+ALAFYLR+KVTST VPGGV
Sbjct 1 MTESILAAQIEVGEHHTATWLGMTVNTDTVLSTAIAALIVLALAFYLRSKVTSTAVPGGV 60
Query 61 QLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTE 120
QLFFEAITIQMR QVESAIGMRIAPFVLPLAVTIFVFILISNWL+VLPVQYTD+HG TTE
Sbjct 61 QLFFEAITIQMRGQVESAIGMRIAPFVLPLAVTIFVFILISNWLSVLPVQYTDEHGQTTE 120
Query 121 LLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKP 180
LLK AAADINYVLALALFVFVCYH AGIWRRGIVGHPIKLLKGHV +LAPINLVEE+AKP
Sbjct 121 LLKPAAADINYVLALALFVFVCYHAAGIWRRGIVGHPIKLLKGHVAILAPINLVEEIAKP 180
Query 181 ISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILYFS 240
ISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWK+FDLFVGAIQAFIFALLTILYFS
Sbjct 181 ISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKSFDLFVGAIQAFIFALLTILYFS 240
Query 241 QAMELEEEHH 250
QAMELEE+HH
Sbjct 241 QAMELEEDHH 250
>gi|289569316|ref|ZP_06449543.1| LOW QUALITY PROTEIN: ATP synthase subunit A atpB [Mycobacterium
tuberculosis T17]
gi|289543070|gb|EFD46718.1| LOW QUALITY PROTEIN: ATP synthase subunit A atpB [Mycobacterium
tuberculosis T17]
Length=239
Score = 471 bits (1213), Expect = 3e-131, Method: Compositional matrix adjust.
Identities = 237/239 (99%), Positives = 237/239 (99%), Gaps = 0/239 (0%)
Query 1 MTETILAAQIEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGV 60
MTETILAAQIEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGV
Sbjct 1 MTETILAAQIEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGV 60
Query 61 QLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTE 120
QLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTE
Sbjct 61 QLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTE 120
Query 121 LLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKP 180
LLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKP
Sbjct 121 LLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKP 180
Query 181 ISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILYF 239
ISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDL VGAIQAFIFALLT LYF
Sbjct 181 ISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLLVGAIQAFIFALLTNLYF 239
>gi|240169510|ref|ZP_04748169.1| F0F1 ATP synthase subunit A [Mycobacterium kansasii ATCC 12478]
Length=249
Score = 467 bits (1202), Expect = 6e-130, Method: Compositional matrix adjust.
Identities = 229/249 (92%), Positives = 241/249 (97%), Gaps = 0/249 (0%)
Query 1 MTETILAAQIEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGV 60
MTE+ILAAQIEVGEHHTATWLGMTVNTDT+LSTAIA +IVIALAFYLR+KVTSTDVPGGV
Sbjct 1 MTESILAAQIEVGEHHTATWLGMTVNTDTILSTAIAAVIVIALAFYLRSKVTSTDVPGGV 60
Query 61 QLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTE 120
QLFFEAITIQMRNQVE AIGMRIAPFVLPLAVTIFVFILISNWL+VLPVQYTDK+G TTE
Sbjct 61 QLFFEAITIQMRNQVEGAIGMRIAPFVLPLAVTIFVFILISNWLSVLPVQYTDKNGQTTE 120
Query 121 LLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKP 180
LLK AAADINYVLALALFVFVCYH AGIWRRG+VGHPIKLLKGHV +LAPIN+VEE+AKP
Sbjct 121 LLKPAAADINYVLALALFVFVCYHAAGIWRRGLVGHPIKLLKGHVAILAPINVVEELAKP 180
Query 181 ISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILYFS 240
ISLSLRLFGNIFAGGILVALIALFPPY+MW PNAIWK+FDLFVGAIQAFIFALLTILYFS
Sbjct 181 ISLSLRLFGNIFAGGILVALIALFPPYVMWLPNAIWKSFDLFVGAIQAFIFALLTILYFS 240
Query 241 QAMELEEEH 249
QAMELEE H
Sbjct 241 QAMELEEHH 249
>gi|118619164|ref|YP_907496.1| F0F1 ATP synthase subunit A [Mycobacterium ulcerans Agy99]
gi|226739810|sp|A0PUK6.1|ATP6_MYCUA RecName: Full=ATP synthase subunit a; AltName: Full=ATP synthase
F0 sector subunit a; AltName: Full=F-ATPase subunit 6
gi|118571274|gb|ABL06025.1| ATP synthase a chain AtpB [Mycobacterium ulcerans Agy99]
Length=250
Score = 467 bits (1202), Expect = 6e-130, Method: Compositional matrix adjust.
Identities = 231/250 (93%), Positives = 240/250 (96%), Gaps = 0/250 (0%)
Query 1 MTETILAAQIEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGV 60
MT +ILAAQIEVGEHHTATWL MTVNTDTVLSTAIA LIV+ALAFYLR+KVTST VPGGV
Sbjct 1 MTASILAAQIEVGEHHTATWLCMTVNTDTVLSTAIAALIVLALAFYLRSKVTSTAVPGGV 60
Query 61 QLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTE 120
QLFFEAITIQMR QVESAIGMRIAPFVLPLAVTIFVFILISNWL+VLPVQYTD+HG TTE
Sbjct 61 QLFFEAITIQMRGQVESAIGMRIAPFVLPLAVTIFVFILISNWLSVLPVQYTDEHGQTTE 120
Query 121 LLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKP 180
LLK AAADINYVLALALFVFVCYH AGIWRRGIVGHPIKLLKGHV +LAPINLVEE+AKP
Sbjct 121 LLKPAAADINYVLALALFVFVCYHAAGIWRRGIVGHPIKLLKGHVAILAPINLVEEIAKP 180
Query 181 ISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILYFS 240
ISLSLRLFGNIFAG ILVALIALFPPYIMWAPNAIWK+FDLFVGAIQAFIFALLTILYFS
Sbjct 181 ISLSLRLFGNIFAGSILVALIALFPPYIMWAPNAIWKSFDLFVGAIQAFIFALLTILYFS 240
Query 241 QAMELEEEHH 250
QAMELEE+HH
Sbjct 241 QAMELEEDHH 250
>gi|296170245|ref|ZP_06851838.1| ATP synthase F0 sector subunit A [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895121|gb|EFG74839.1| ATP synthase F0 sector subunit A [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=252
Score = 440 bits (1132), Expect = 8e-122, Method: Compositional matrix adjust.
Identities = 217/251 (87%), Positives = 234/251 (94%), Gaps = 2/251 (0%)
Query 1 MTETILAAQ--IEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPG 58
MTET A+ IEVGEHH ATWLGMTVNTDT+LST IA +IV+ALAF+LRAK+TST VP
Sbjct 1 MTETTFLAESAIEVGEHHHATWLGMTVNTDTILSTGIAAVIVLALAFFLRAKITSTGVPS 60
Query 59 GVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHT 118
GVQLF+EAIT+QMR+Q+E AIGMRIAPFVLPLAVTIFVFILISNWL+VLP+QYTDK GHT
Sbjct 61 GVQLFWEAITVQMRDQIEGAIGMRIAPFVLPLAVTIFVFILISNWLSVLPLQYTDKSGHT 120
Query 119 TELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVA 178
TELLKSAAADINYVLALALFVFVCYH AGIWRRGIVGHP+ +LKGHV LAPINLVEE+A
Sbjct 121 TELLKSAAADINYVLALALFVFVCYHVAGIWRRGIVGHPLAVLKGHVAFLAPINLVEELA 180
Query 179 KPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILY 238
KPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFA+LTILY
Sbjct 181 KPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFAILTILY 240
Query 239 FSQAMELEEEH 249
FSQAME+EE H
Sbjct 241 FSQAMEIEEHH 251
>gi|118462240|ref|YP_880760.1| F0F1 ATP synthase subunit A [Mycobacterium avium 104]
gi|254774343|ref|ZP_05215859.1| F0F1 ATP synthase subunit A [Mycobacterium avium subsp. avium
ATCC 25291]
gi|118163527|gb|ABK64424.1| ATP synthase F0, A subunit [Mycobacterium avium 104]
gi|336460905|gb|EGO39788.1| F0F1-type ATP synthase, alpha subunit [Mycobacterium avium subsp.
paratuberculosis S397]
Length=252
Score = 436 bits (1120), Expect = 2e-120, Method: Compositional matrix adjust.
Identities = 213/251 (85%), Positives = 234/251 (94%), Gaps = 2/251 (0%)
Query 1 MTETILAAQ--IEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPG 58
M ET A+ IEVGEH+ ATWLGMTVNTDT+LST IA LIV+ALAF+LRAK+TST VP
Sbjct 1 MPETTFLAESAIEVGEHNHATWLGMTVNTDTILSTGIAALIVLALAFFLRAKITSTGVPS 60
Query 59 GVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHT 118
GVQLF+EAIT+QMR+Q+ESA+GMRIAPFVLPLAVTIFVFILISNWL+VLP+QYTDK GHT
Sbjct 61 GVQLFWEAITVQMRDQIESAVGMRIAPFVLPLAVTIFVFILISNWLSVLPLQYTDKSGHT 120
Query 119 TELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVA 178
TELLKSAAADINYVLALALFVFVCYH AGIWRRG+VGHP+ +LKGHV LAPIN+VEE+A
Sbjct 121 TELLKSAAADINYVLALALFVFVCYHVAGIWRRGVVGHPLAVLKGHVAFLAPINVVEELA 180
Query 179 KPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILY 238
KPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIF++LTILY
Sbjct 181 KPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFSILTILY 240
Query 239 FSQAMELEEEH 249
FSQAME+EE H
Sbjct 241 FSQAMEIEEHH 251
>gi|41408555|ref|NP_961391.1| F0F1 ATP synthase subunit A [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396913|gb|AAS04774.1| AtpB [Mycobacterium avium subsp. paratuberculosis K-10]
Length=252
Score = 434 bits (1116), Expect = 6e-120, Method: Compositional matrix adjust.
Identities = 212/251 (85%), Positives = 233/251 (93%), Gaps = 2/251 (0%)
Query 1 MTETILAAQ--IEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPG 58
M ET A+ IEVGEH+ ATWLGMTVNTDT+LST IA LIV+ALAF+LRAK+TST VP
Sbjct 1 MPETTFLAESAIEVGEHNHATWLGMTVNTDTILSTGIAALIVLALAFFLRAKITSTGVPS 60
Query 59 GVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHT 118
GVQLF+EAIT+QMR+Q+ESA+GMRIAPFVLPLAVTIFVFILISNWL+VLP+QYTDK GHT
Sbjct 61 GVQLFWEAITVQMRDQIESAVGMRIAPFVLPLAVTIFVFILISNWLSVLPLQYTDKSGHT 120
Query 119 TELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVA 178
TELLKS AADINYVLALALFVFVCYH AGIWRRG+VGHP+ +LKGHV LAPIN+VEE+A
Sbjct 121 TELLKSVAADINYVLALALFVFVCYHVAGIWRRGVVGHPLAVLKGHVAFLAPINVVEELA 180
Query 179 KPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILY 238
KPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIF++LTILY
Sbjct 181 KPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFSILTILY 240
Query 239 FSQAMELEEEH 249
FSQAME+EE H
Sbjct 241 FSQAMEIEEHH 251
>gi|254821303|ref|ZP_05226304.1| F0F1 ATP synthase subunit A [Mycobacterium intracellulare ATCC
13950]
Length=252
Score = 431 bits (1107), Expect = 6e-119, Method: Compositional matrix adjust.
Identities = 210/251 (84%), Positives = 233/251 (93%), Gaps = 2/251 (0%)
Query 1 MTETILAAQ--IEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPG 58
M ET A+ IEVGEH+ ATWLGMTVNTDT++ST IA LIV+ALAF+LRAK+TST VP
Sbjct 1 MPETTFLAEGAIEVGEHNHATWLGMTVNTDTIMSTGIAALIVLALAFFLRAKITSTGVPS 60
Query 59 GVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHT 118
GVQLF+EAIT+QMR+Q+ESA+GMRIAPFVLPLAVTIFVFILISNWL+VLP+QYTD GHT
Sbjct 61 GVQLFWEAITVQMRDQIESAVGMRIAPFVLPLAVTIFVFILISNWLSVLPLQYTDASGHT 120
Query 119 TELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVA 178
TELLKSAAADINYVLALALFVFVCYH AGIWRRG+VGHP+ +LKGHV LAPIN+VEE+A
Sbjct 121 TELLKSAAADINYVLALALFVFVCYHVAGIWRRGVVGHPLAVLKGHVAFLAPINVVEELA 180
Query 179 KPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILY 238
KPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIF++LTILY
Sbjct 181 KPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFSILTILY 240
Query 239 FSQAMELEEEH 249
FSQAME+E+ H
Sbjct 241 FSQAMEIEDHH 251
>gi|342858035|ref|ZP_08714691.1| F0F1 ATP synthase subunit A [Mycobacterium colombiense CECT 3035]
gi|342135368|gb|EGT88534.1| F0F1 ATP synthase subunit A [Mycobacterium colombiense CECT 3035]
Length=252
Score = 430 bits (1105), Expect = 1e-118, Method: Compositional matrix adjust.
Identities = 210/251 (84%), Positives = 232/251 (93%), Gaps = 2/251 (0%)
Query 1 MTETILAAQ--IEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPG 58
M ET A+ IEVGEH A WLGMTVNTDT+L+T IA +IV+ALAF+LRAK+TST VP
Sbjct 1 MPETTFLAEAAIEVGEHTHAKWLGMTVNTDTILATGIAAVIVLALAFFLRAKITSTGVPS 60
Query 59 GVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHT 118
GVQLF+EAIT+QMR+Q+ESA+GMRIAPFVLPLAVTIFVFILISNWL+VLP+QYTDK GHT
Sbjct 61 GVQLFWEAITVQMRDQIESAVGMRIAPFVLPLAVTIFVFILISNWLSVLPLQYTDKSGHT 120
Query 119 TELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVA 178
TELLKSAAADINYVLALALFVFVCYH AGIWRRG+VGHP+ +LKGHV LAPINLVEE+A
Sbjct 121 TELLKSAAADINYVLALALFVFVCYHVAGIWRRGVVGHPLAVLKGHVAFLAPINLVEELA 180
Query 179 KPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILY 238
KPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIF++LTILY
Sbjct 181 KPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFSILTILY 240
Query 239 FSQAMELEEEH 249
FSQAME+E+ H
Sbjct 241 FSQAMEIEDHH 251
>gi|15827570|ref|NP_301833.1| F0F1 ATP synthase subunit A [Mycobacterium leprae TN]
gi|221230047|ref|YP_002503463.1| F0F1 ATP synthase subunit A [Mycobacterium leprae Br4923]
gi|1168559|sp|P45829.1|ATP6_MYCLE RecName: Full=ATP synthase subunit a; AltName: Full=ATP synthase
F0 sector subunit a; AltName: Full=F-ATPase subunit 6
gi|699349|gb|AAA63110.1| atpB [Mycobacterium leprae]
gi|13093120|emb|CAC31520.1| probable ATP synthase A chain protein [Mycobacterium leprae]
gi|219933154|emb|CAR71234.1| probable ATP synthase A chain protein [Mycobacterium leprae Br4923]
Length=251
Score = 412 bits (1059), Expect = 2e-113, Method: Compositional matrix adjust.
Identities = 210/250 (84%), Positives = 228/250 (92%), Gaps = 1/250 (0%)
Query 1 MTETILAA-QIEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGG 59
MTETIL+ QIEVGEHHT TW GMTVNTDTVLSTAIA IVIALAF+LR KV ST VP G
Sbjct 1 MTETILSGGQIEVGEHHTTTWFGMTVNTDTVLSTAIAAAIVIALAFFLRTKVNSTGVPCG 60
Query 60 VQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTT 119
+QLF+EAIT+QMR Q+ESAIGMRIAPFVLPLAVTIFVFILISNWL+VLP+QYT+ GHTT
Sbjct 61 MQLFWEAITVQMRTQIESAIGMRIAPFVLPLAVTIFVFILISNWLSVLPLQYTNADGHTT 120
Query 120 ELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAK 179
E+L SAAADINYVLALA FVFVCYH AGIWRRGIVGHP+ +LKGHV LAPINLVEE+ K
Sbjct 121 EVLSSAAADINYVLALAFFVFVCYHLAGIWRRGIVGHPVAVLKGHVAFLAPINLVEEITK 180
Query 180 PISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILYF 239
PISLSLRLFGNIFAGGILV LIALFPPYIMWAPNAIWK+FDLFVGAIQAFIF++LTILYF
Sbjct 181 PISLSLRLFGNIFAGGILVTLIALFPPYIMWAPNAIWKSFDLFVGAIQAFIFSILTILYF 240
Query 240 SQAMELEEEH 249
SQAME+E+ H
Sbjct 241 SQAMEVEDHH 250
>gi|108800846|ref|YP_641043.1| F0F1 ATP synthase subunit A [Mycobacterium sp. MCS]
gi|119869986|ref|YP_939938.1| F0F1 ATP synthase subunit A [Mycobacterium sp. KMS]
gi|126436444|ref|YP_001072135.1| F0F1 ATP synthase subunit A [Mycobacterium sp. JLS]
gi|108771265|gb|ABG09987.1| ATP synthase F0, A subunit [Mycobacterium sp. MCS]
gi|119696075|gb|ABL93148.1| ATP synthase F0, A subunit [Mycobacterium sp. KMS]
gi|126236244|gb|ABN99644.1| ATP synthase F0, A subunit [Mycobacterium sp. JLS]
Length=251
Score = 396 bits (1018), Expect = 1e-108, Method: Compositional matrix adjust.
Identities = 196/251 (79%), Positives = 225/251 (90%), Gaps = 3/251 (1%)
Query 1 MTETILAAQ--IEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPG 58
MT+T LAA+ I+VG H A W G+TVNTDT+LSTAIA IV+ LAF+LRAKVTST VP
Sbjct 1 MTQTFLAAESGIQVGHHTEANWFGLTVNTDTILSTAIAAAIVLGLAFFLRAKVTSTGVPN 60
Query 59 GVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHT 118
GVQLF+EA+T+QMRNQ+ESAIGMR+A FVLPLAVT+F FILI+NWL+VLPVQY+D+ G
Sbjct 61 GVQLFWEALTVQMRNQIESAIGMRVAGFVLPLAVTLFAFILIANWLSVLPVQYSDETG-I 119
Query 119 TELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVA 178
ELLK AA+DIN+VLALALFVF+ YH AG WRRG++GHP KLLKGHV +LAPINLVEE+A
Sbjct 120 HELLKPAASDINFVLALALFVFIAYHAAGFWRRGLLGHPKKLLKGHVAILAPINLVEELA 179
Query 179 KPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILY 238
KPISLSLRLFGNIFAGGILVALIALFPP+IMWAPNAIWK+FDLFVGAIQAFIFALLTILY
Sbjct 180 KPISLSLRLFGNIFAGGILVALIALFPPWIMWAPNAIWKSFDLFVGAIQAFIFALLTILY 239
Query 239 FSQAMELEEEH 249
FSQ+MEL++ H
Sbjct 240 FSQSMELDDHH 250
>gi|333989943|ref|YP_004522557.1| ATP synthase a chain AtpB [Mycobacterium sp. JDM601]
gi|333485911|gb|AEF35303.1| ATP synthase a chain AtpB [Mycobacterium sp. JDM601]
Length=252
Score = 391 bits (1004), Expect = 5e-107, Method: Compositional matrix adjust.
Identities = 197/251 (79%), Positives = 218/251 (87%), Gaps = 5/251 (1%)
Query 1 MTETILA-AQIEVGEHHTATW--LGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVP 57
M ET LA A IEVG H TA W LG TVN DT+ S+AIA ++VIALAFYLRAKVTST VP
Sbjct 1 MIETTLAEAAIEVGHHETAVWPVLG-TVNIDTITSSAIAAVVVIALAFYLRAKVTSTGVP 59
Query 58 GGVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGH 117
GGVQLFFEAIT+QMRNQ+E AIGMRIAPFVLPLAVTIFVFIL+SNW+ V PVQY+D G
Sbjct 60 GGVQLFFEAITVQMRNQIEGAIGMRIAPFVLPLAVTIFVFILVSNWMGVFPVQYSDASG- 118
Query 118 TTELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEV 177
T EL A+DINYVLALA+FVF CYH AG WRRG +GHP ++LKGHV +LAPINLVEE+
Sbjct 119 TKELFAPPASDINYVLALAMFVFFCYHLAGFWRRGFLGHPWRVLKGHVAILAPINLVEEI 178
Query 178 AKPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTIL 237
AKP+SLSLRLFGNIFAGGILVALIA+FPPYIMWAPNAIWKAFDLFVG IQAFIFALLTIL
Sbjct 179 AKPVSLSLRLFGNIFAGGILVALIAMFPPYIMWAPNAIWKAFDLFVGLIQAFIFALLTIL 238
Query 238 YFSQAMELEEE 248
YF+QAME++E
Sbjct 239 YFAQAMEMDEH 249
>gi|169628538|ref|YP_001702187.1| F0F1 ATP synthase subunit A [Mycobacterium abscessus ATCC 19977]
gi|169240505|emb|CAM61533.1| ATP synthase A chain AtpB [Mycobacterium abscessus]
Length=257
Score = 375 bits (963), Expect = 3e-102, Method: Compositional matrix adjust.
Identities = 185/249 (75%), Positives = 214/249 (86%), Gaps = 6/249 (2%)
Query 8 AQIEVGEHHTATWLG------MTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGVQ 61
A IEVG H TW G +T N DT+++TA+AG++VIALA +LRAKVTST VP GVQ
Sbjct 9 AAIEVGHHKHWTWHGDFWPYELTFNVDTIVATALAGVVVIALALFLRAKVTSTGVPNGVQ 68
Query 62 LFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTEL 121
LFFEA+T+Q RNQVESAIGM+IAPFVLPLAVTIFVFIL+SNW++VLPVQYTD G T EL
Sbjct 69 LFFEAVTVQFRNQVESAIGMKIAPFVLPLAVTIFVFILVSNWISVLPVQYTDDTGKTAEL 128
Query 122 LKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKPI 181
L A+DINYVLALALFVFVCYH AG RRG++GHPIKLLKGH + A IN +EE+AKPI
Sbjct 129 LAPPASDINYVLALALFVFVCYHIAGFARRGLIGHPIKLLKGHTWVTAFINPIEELAKPI 188
Query 182 SLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILYFSQ 241
SLSLRLFGN+FAGGI+VALIA+FP +IMWAPNAIWK+FDLFVG IQAFIFALLT+LYFSQ
Sbjct 189 SLSLRLFGNMFAGGIMVALIAMFPAWIMWAPNAIWKSFDLFVGLIQAFIFALLTVLYFSQ 248
Query 242 AMELEEEHH 250
+MEL+E+HH
Sbjct 249 SMELDEDHH 257
>gi|120405288|ref|YP_955117.1| F0F1 ATP synthase subunit A [Mycobacterium vanbaalenii PYR-1]
gi|119958106|gb|ABM15111.1| ATP synthase F0 subcomplex A subunit [Mycobacterium vanbaalenii
PYR-1]
Length=256
Score = 374 bits (959), Expect = 1e-101, Method: Compositional matrix adjust.
Identities = 189/257 (74%), Positives = 216/257 (85%), Gaps = 8/257 (3%)
Query 1 MTETILAAQ-----IEVGEHHTATW--LGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTS 53
MTE+ILAA+ I VG HHT + GMT N DT+L+TAI +IVI LAFYL++KVTS
Sbjct 1 MTESILAAEEGGPAIHVG-HHTLVFEMFGMTFNGDTILATAITAVIVIGLAFYLKSKVTS 59
Query 54 TDVPGGVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTD 113
T VPGGVQLF+EA+TIQMR Q+E AIGM++APFVLPLAV IFVFILISNWLAVLP+QY
Sbjct 60 TGVPGGVQLFWEALTIQMRGQIEQAIGMKVAPFVLPLAVAIFVFILISNWLAVLPLQYGG 119
Query 114 KHGHTTELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINL 173
G EL K A+DIN+VLALALFVF+CYH AGIWRRGIVGHPIK++KGHV LAPIN+
Sbjct 120 SDGAAGELYKPPASDINFVLALALFVFICYHAAGIWRRGIVGHPIKVVKGHVAFLAPINI 179
Query 174 VEEVAKPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFAL 233
VEE+AKPISL+LRLFGNIFAGGILVALIA+FP Y+ W PNAIWK FDLFVG IQAFIF+L
Sbjct 180 VEELAKPISLALRLFGNIFAGGILVALIAMFPWYVQWLPNAIWKTFDLFVGLIQAFIFSL 239
Query 234 LTILYFSQAMELEEEHH 250
LTILYFSQ+MEL+ E H
Sbjct 240 LTILYFSQSMELDHEDH 256
>gi|118469891|ref|YP_889194.1| F0F1 ATP synthase subunit A [Mycobacterium smegmatis str. MC2
155]
gi|118171178|gb|ABK72074.1| ATP synthase F0, A subunit [Mycobacterium smegmatis str. MC2
155]
Length=252
Score = 370 bits (950), Expect = 1e-100, Method: Compositional matrix adjust.
Identities = 185/246 (76%), Positives = 210/246 (86%), Gaps = 3/246 (1%)
Query 7 AAQIEVGEHHTATW--LGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGVQLFF 64
A I VG HHT + GMT N DT+L+TA+ +IVIALAFYLRAKVTST VP GVQLF+
Sbjct 8 GAAIHVG-HHTLVFELFGMTFNGDTILATAVTAVIVIALAFYLRAKVTSTGVPSGVQLFW 66
Query 65 EAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTELLKS 124
EA+TIQMR Q+E +IGM+IAPFVLPL+VTIFVFILISNWLAVLP+QY G EL K+
Sbjct 67 EALTIQMRQQIEGSIGMKIAPFVLPLSVTIFVFILISNWLAVLPLQYGGADGAAAELYKA 126
Query 125 AAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKPISLS 184
A+DIN+VLALALFVFVCYH AGIWRRGIVGHPIK++KGHV LAPIN+VEE+AKPISL+
Sbjct 127 PASDINFVLALALFVFVCYHAAGIWRRGIVGHPIKVVKGHVAFLAPINIVEELAKPISLA 186
Query 185 LRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILYFSQAME 244
LRLFGNIFAGGILVALIA+FP YI W PNA+WK FDLFVG IQAFIF+LLTILYFSQ+ME
Sbjct 187 LRLFGNIFAGGILVALIAMFPWYIQWFPNAVWKTFDLFVGLIQAFIFSLLTILYFSQSME 246
Query 245 LEEEHH 250
L+ E H
Sbjct 247 LDHEDH 252
>gi|145222900|ref|YP_001133578.1| F0F1 ATP synthase subunit A [Mycobacterium gilvum PYR-GCK]
gi|315443365|ref|YP_004076244.1| ATP synthase F0 subcomplex subunit alpha [Mycobacterium sp. Spyr1]
gi|145215386|gb|ABP44790.1| ATP synthase F0 subcomplex A subunit [Mycobacterium gilvum PYR-GCK]
gi|315261668|gb|ADT98409.1| ATP synthase F0 subcomplex A subunit [Mycobacterium sp. Spyr1]
Length=259
Score = 369 bits (947), Expect = 2e-100, Method: Compositional matrix adjust.
Identities = 185/257 (72%), Positives = 215/257 (84%), Gaps = 8/257 (3%)
Query 1 MTETILAAQ-----IEVGEHHTATW--LGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTS 53
M ET+LAA+ I VG HHT + GMT N DT+L+TAI +IVI LAFYL++KVT+
Sbjct 4 MFETVLAAEEGGAPIHVG-HHTMVFELFGMTFNGDTILATAITAVIVIGLAFYLKSKVTA 62
Query 54 TDVPGGVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTD 113
T VPGGVQLF+EA+TIQMR Q+E AIGM++APFVLPLAV IFVFIL+SNWLAVLP+QY
Sbjct 63 TGVPGGVQLFWEALTIQMRGQIEQAIGMKVAPFVLPLAVAIFVFILVSNWLAVLPLQYGG 122
Query 114 KHGHTTELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINL 173
G EL K A+DIN+VLALALFVF+CYH AGIWRRGIVGHPIK++KGHV LAPIN+
Sbjct 123 SDGAAGELYKPPASDINFVLALALFVFICYHAAGIWRRGIVGHPIKVVKGHVAFLAPINV 182
Query 174 VEEVAKPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFAL 233
VEE+AKPISL+LRLFGNIFAGGILVALIA+FP YI W PNA+WK FDLFVG IQAFIF+L
Sbjct 183 VEELAKPISLALRLFGNIFAGGILVALIAMFPWYIQWLPNAVWKTFDLFVGLIQAFIFSL 242
Query 234 LTILYFSQAMELEEEHH 250
LTILYFSQ+MEL+ + H
Sbjct 243 LTILYFSQSMELDHDEH 259
>gi|262201854|ref|YP_003273062.1| ATP synthase F0 subunit A [Gordonia bronchialis DSM 43247]
gi|262085201|gb|ACY21169.1| ATP synthase F0, A subunit [Gordonia bronchialis DSM 43247]
Length=251
Score = 351 bits (901), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 179/252 (72%), Positives = 213/252 (85%), Gaps = 3/252 (1%)
Query 1 MTET--ILAAQIEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPG 58
MT+T + AQI VG H T GMT NTDT+LS+AIA IVIA+AF+++AK+TS P
Sbjct 1 MTDTTYLAEAQIHVGVHETVELWGMTFNTDTILSSAIAAAIVIAMAFFVKAKMTSKR-PN 59
Query 59 GVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHT 118
VQL+FE +T+QMR Q+ESAIGMRIA FVLPLAVT+F FIL++NWL+VLPVQY D G
Sbjct 60 TVQLYFEVLTVQMRQQIESAIGMRIAGFVLPLAVTLFTFILVANWLSVLPVQYADSSGGV 119
Query 119 TELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVA 178
ELLK AA+D+N+V A+ALFVFV YH AG+ RRG++GHP+KLLKGHV LAPINL+EE+A
Sbjct 120 HELLKPAASDVNFVYAMALFVFVWYHAAGVKRRGVIGHPVKLLKGHVAFLAPINLIEEIA 179
Query 179 KPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILY 238
KP+SLSLRLFGNIFAGGI+VALIA+FP YIMW PNAIWK+FDLFVG IQAFIF+LLTILY
Sbjct 180 KPVSLSLRLFGNIFAGGIMVALIAIFPAYIMWFPNAIWKSFDLFVGLIQAFIFSLLTILY 239
Query 239 FSQAMELEEEHH 250
FSQAMEL+E+HH
Sbjct 240 FSQAMELDEDHH 251
>gi|317506172|ref|ZP_07963993.1| ATP synthase subunit A protein [Segniliparus rugosus ATCC BAA-974]
gi|316255517|gb|EFV14766.1| ATP synthase subunit A protein [Segniliparus rugosus ATCC BAA-974]
Length=253
Score = 337 bits (863), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/259 (67%), Positives = 209/259 (81%), Gaps = 15/259 (5%)
Query 1 MTETILAAQ--------IEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVT 52
MT+ +L AQ I+VGEH A G++ N DT+++T +A IV+ LAFYLRAKVT
Sbjct 1 MTDQVLLAQSRVLAESSIKVGEHWKAELFGLSFNLDTIIATVVAAAIVLGLAFYLRAKVT 60
Query 53 STDVPGGVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYT 112
S VPGGVQLFFEA+T+QMR Q+ESAIG+++APFVLPLAVTIFVFILISNWL+VLPVQ
Sbjct 61 S-GVPGGVQLFFEAVTVQMRGQIESAIGLKVAPFVLPLAVTIFVFILISNWLSVLPVQIG 119
Query 113 DKHGHTTELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIK-LLKGHVTLLAPI 171
D+ ELLK A+DINY LALA+FVF+ YH AGI RRG VG +K ++KGH +L I
Sbjct 120 DE-----ELLKPPASDINYTLALAVFVFLFYHVAGIRRRGGVGQHLKQVVKGHSPILFII 174
Query 172 NLVEEVAKPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIF 231
N++EE+AKP+SLSLRLFGN+FAGGI+VALIA+FP YI W PNA+WK FDLFVG IQAFIF
Sbjct 175 NIIEELAKPVSLSLRLFGNMFAGGIMVALIAMFPWYIQWGPNAVWKLFDLFVGLIQAFIF 234
Query 232 ALLTILYFSQAMELEEEHH 250
ALLT+LYFSQ+MELE+EHH
Sbjct 235 ALLTVLYFSQSMELEDEHH 253
>gi|296393122|ref|YP_003658006.1| ATP synthase F0 subunit A [Segniliparus rotundus DSM 44985]
gi|296180269|gb|ADG97175.1| ATP synthase F0, A subunit [Segniliparus rotundus DSM 44985]
Length=253
Score = 325 bits (832), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 178/259 (69%), Positives = 213/259 (83%), Gaps = 15/259 (5%)
Query 1 MTETILAAQ--------IEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVT 52
MTE + AQ I+VGEH A G+++N DT+++TAIA +IV+ALAFYLRAKVT
Sbjct 1 MTEQVPLAQHHVLAESSIKVGEHWKADLFGVSLNLDTIIATAIAAVIVLALAFYLRAKVT 60
Query 53 STDVPGGVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYT 112
S VPGGVQLFFEAIT+QMR Q+ESAIG+++APFVLPLAVTIFVFILISNWL+VLPVQ
Sbjct 61 S-GVPGGVQLFFEAITVQMRGQIESAIGLKVAPFVLPLAVTIFVFILISNWLSVLPVQVG 119
Query 113 DKHGHTTELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIK-LLKGHVTLLAPI 171
D+ ELLK A+DINY LALALFVFV YH AG+ RRG +G +K ++KGH +L I
Sbjct 120 DE-----ELLKPPASDINYTLALALFVFVFYHVAGVRRRGGLGQHLKQVVKGHSPILFLI 174
Query 172 NLVEEVAKPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIF 231
N++EE+AKP+SLSLRLFGN+FAGGI+VALIA+FP YI WAPNA+WK FDLFVG IQAFIF
Sbjct 175 NIIEELAKPVSLSLRLFGNMFAGGIMVALIAMFPWYIQWAPNAVWKLFDLFVGLIQAFIF 234
Query 232 ALLTILYFSQAMELEEEHH 250
ALLT+LYFSQ+MELE+EHH
Sbjct 235 ALLTVLYFSQSMELEDEHH 253
>gi|343928065|ref|ZP_08767530.1| ATP synthase subunit a [Gordonia alkanivorans NBRC 16433]
gi|343762073|dbj|GAA14456.1| ATP synthase subunit a [Gordonia alkanivorans NBRC 16433]
Length=249
Score = 308 bits (789), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 158/240 (66%), Positives = 201/240 (84%), Gaps = 5/240 (2%)
Query 8 AQIEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGVQLFFEAI 67
+ I+VG + G+T N +T+++TA+A I++ALAFYL++KVTST VP GVQLF+E +
Sbjct 14 SSIQVGHYTKFELFGLTFNLETIIATALAAAIMLALAFYLKSKVTSTGVPSGVQLFWETV 73
Query 68 TIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTELLKSAAA 127
T+QMR+QVESAIGM++AP+VLPLAV++F FILISNWL++LPVQ GH E+LK AA
Sbjct 74 TVQMRSQVESAIGMKVAPYVLPLAVSLFTFILISNWLSILPVQV----GHH-EILKPPAA 128
Query 128 DINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKPISLSLRL 187
D+N+ ALA+FVF+ Y AG +RG++GHP ++LKGHVT LAPIN++EE KPISLSLRL
Sbjct 129 DVNFAYALAVFVFIWYQAAGFKQRGLLGHPKRILKGHVTFLAPINVIEEFTKPISLSLRL 188
Query 188 FGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILYFSQAMELEE 247
FGN+FAG ++VALIALFPPYIMWAPNAIWK+F+LFVG IQAFIFALLTILYFSQ+ME E+
Sbjct 189 FGNVFAGSMMVALIALFPPYIMWAPNAIWKSFELFVGLIQAFIFALLTILYFSQSMETED 248
>gi|296138976|ref|YP_003646219.1| ATP synthase F0 subunit alpha [Tsukamurella paurometabola DSM
20162]
gi|296027110|gb|ADG77880.1| ATP synthase F0, A subunit [Tsukamurella paurometabola DSM 20162]
Length=250
Score = 282 bits (721), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/243 (58%), Positives = 188/243 (78%), Gaps = 2/243 (0%)
Query 8 AQIEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGVQLFFEAI 67
I+V + + GMT + DT+L+TAIA IV+ LAF L+AKVTST VP GVQLF+EAI
Sbjct 9 GSIKVAHYKSFELWGMTFHWDTILATAIAATIVLILAFILKAKVTSTGVPSGVQLFWEAI 68
Query 68 TIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTELLKSAAA 127
TIQ+R Q+ESAIGMR+APF+LPLA+ +F IL +NWLAVLP QY+ G TE+ AA
Sbjct 69 TIQLRGQIESAIGMRVAPFLLPLAIALFTLILAANWLAVLPQQYSGPDGAPTEIFLPPAA 128
Query 128 DINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEE-VAKPISLSLR 186
D+++V AL L V++ YH AG G+ G+P K++KGH LAPIN++EE ++KP+SL+LR
Sbjct 129 DVSFVYALVLVVYLGYHFAGFRTHGLFGYPAKVVKGHAIGLAPINVIEELISKPLSLALR 188
Query 187 LFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILYFSQAMELE 246
LFGN+FAG ++VA+IAL P Y++W PN++WK+F+LFVG IQAFIF+LLTILYF+ +ME +
Sbjct 189 LFGNVFAGTVMVAVIALLPAYLLWFPNSLWKSFELFVGLIQAFIFSLLTILYFATSME-K 247
Query 247 EEH 249
+H
Sbjct 248 TDH 250
>gi|117927855|ref|YP_872406.1| F0F1 ATP synthase subunit A [Acidothermus cellulolyticus 11B]
gi|254807642|sp|A0LSL0.1|ATP6_ACIC1 RecName: Full=ATP synthase subunit a; AltName: Full=ATP synthase
F0 sector subunit a; AltName: Full=F-ATPase subunit 6
gi|117648318|gb|ABK52420.1| ATP synthase F0 subcomplex A subunit [Acidothermus cellulolyticus
11B]
Length=271
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/238 (50%), Positives = 163/238 (69%), Gaps = 9/238 (3%)
Query 5 ILAAQIEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGVQLFF 64
+LA ++++G H TA +LG+T + DT+L++ IAG+IV+ L Y+R S VP +QL F
Sbjct 9 VLAVEVDIGTHETAKFLGLTWHWDTILTSVIAGVIVVGLGLYMRWTARS-GVPSKMQLLF 67
Query 65 EAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTELLKS 124
E + + QVE ++G+R+APFV P+AVT+FV+IL+ NW+ VLP GH E L +
Sbjct 68 EMLVSWVNRQVEESMGLRVAPFVAPMAVTLFVYILLCNWIGVLP------SGHP-EHLPA 120
Query 125 AAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKPISLS 184
ADIN L LAL V V H + RRG+ G I+ + PIN+VEE+AKPI+L+
Sbjct 121 PTADINLTLTLALVVIVPMHIVSLKRRGL-GRYIRHYFEPYKIFFPINVVEELAKPITLA 179
Query 185 LRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILYFSQA 242
LRLFGNIF+G I+V+L+AL PPY++W P +WK DL VG IQAFIFALLTILY++ A
Sbjct 180 LRLFGNIFSGAIMVSLLALMPPYVLWLPQWLWKLIDLGVGVIQAFIFALLTILYYAFA 237
>gi|331695527|ref|YP_004331766.1| ATP synthase subunit a [Pseudonocardia dioxanivorans CB1190]
gi|326950216|gb|AEA23913.1| ATP synthase subunit a [Pseudonocardia dioxanivorans CB1190]
Length=244
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/257 (43%), Positives = 155/257 (61%), Gaps = 22/257 (8%)
Query 1 MTETILAA--QIEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPG 58
M +LAA +I+ GEH T + G+TVN DT++ T IA +IV FY+ + T P
Sbjct 1 MNAEVLAAGGEIKPGEHWTGSLFGLTVNLDTIIGTLIAAVIVCGAGFYMARRATKGR-PS 59
Query 59 GVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHT 118
G+Q+ FEA+ ++ Q+ +G+R V+ L +T+F FILI NWLA LP ++
Sbjct 60 GLQVAFEALAGWVQGQIRDGMGLRAPRGVVGLCITLFAFILICNWLAALPSEH------- 112
Query 119 TELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVT----LLAPINLV 174
+ +D+N V +AL V V + AGI +G K GH T LAPI V
Sbjct 113 --WIPPPTSDVNLVYPMALLVIVWVNVAGIRAKGA-----KSYFGHFTKPYAFLAPIEFV 165
Query 175 EEV-AKPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFAL 233
+ ++P+SL+LRLFGNIFAGGI+VA+I L Y++W P A WK FD+F+GAIQA IF L
Sbjct 166 TQYFSRPLSLALRLFGNIFAGGIMVAVIGLMSAYVLWVPMAAWKLFDMFIGAIQALIFTL 225
Query 234 LTILYFSQAMELEEEHH 250
LT++YF++A+ E + H
Sbjct 226 LTLIYFTEAVGSEADEH 242
>gi|320529510|ref|ZP_08030595.1| ATP synthase F0, A subunit [Selenomonas artemidis F0399]
gi|320138221|gb|EFW30118.1| ATP synthase F0, A subunit [Selenomonas artemidis F0399]
Length=223
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/239 (36%), Positives = 131/239 (55%), Gaps = 18/239 (7%)
Query 11 EVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGVQLFFEAITIQ 70
E+G T + G+T N +T+ T I +IV+ +AF A + VP G Q E +
Sbjct 3 EIGVRETVQFAGLTFNWETLEMTWITMVIVLLIAFL--ATRSLKLVPSGWQNVVEMVVTA 60
Query 71 MRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTELLKSAAADIN 130
+ Q ++ +G R F+ P VT+F+F+L+SNW+ ++P + S D+N
Sbjct 61 LAEQSDTMLGKR-GQFLSPFIVTLFLFLLVSNWVGLVPT------------MASPTNDLN 107
Query 131 YVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKPISLSLRLFGN 190
L LAL V H G++ +G GH I + IN +EEVAKPI+L+ RLFGN
Sbjct 108 TTLGLALLVICMVHVLGVYMKG--GHYIAHFFQPTPVFVIINAIEEVAKPITLAFRLFGN 165
Query 191 IFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILYFSQAMELEEEH 249
I AG IL+ ++ P M P+ +W AF +F+G +QA IF +L++ Y + A++ E+EH
Sbjct 166 ILAGEILIIVLLKLMPIWMPVPSVLWLAFSIFIGGVQAVIFTMLSMAYLANAVK-EDEH 223
>gi|313897019|ref|ZP_07830566.1| ATP synthase F0, A subunit [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312974466|gb|EFR39934.1| ATP synthase F0, A subunit [Selenomonas sp. oral taxon 137 str.
F0430]
Length=223
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/239 (36%), Positives = 130/239 (55%), Gaps = 18/239 (7%)
Query 11 EVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGVQLFFEAITIQ 70
E+G T + G+T N +T+ T I IV+ +AF A + VP G Q E +
Sbjct 3 EIGVRETVQFAGLTFNWETLEMTWITMAIVLLIAFL--ATRSLKLVPSGWQNVVEMVVTA 60
Query 71 MRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTELLKSAAADIN 130
+ Q ++ +G R F+ P VT+F+F+L+SNW+ ++P + S D+N
Sbjct 61 LAEQSDTMLGKR-GQFLSPFIVTLFLFLLVSNWVGLVPT------------MASPTNDLN 107
Query 131 YVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKPISLSLRLFGN 190
L LAL V H G++ +G GH I + IN +EEVAKPI+L+ RLFGN
Sbjct 108 TTLGLALLVICMVHVLGVYMKG--GHYIAHFFQPTPVFVIINAIEEVAKPITLAFRLFGN 165
Query 191 IFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILYFSQAMELEEEH 249
I AG IL+ ++ P M P+ +W AF +F+G +QA IF +L++ Y + A++ E+EH
Sbjct 166 ILAGEILIIVLLKLMPIWMPVPSVLWLAFSIFIGGVQAVIFTMLSMAYLANAVK-EDEH 223
>gi|62262049|gb|AAX78040.1| unknown protein [synthetic construct]
Length=298
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/265 (34%), Positives = 142/265 (54%), Gaps = 25/265 (9%)
Query 1 MTETILAAQI--EVGEHHTATW---LGM----TVNTDTVLSTAIAGLIVIALAFYLRAKV 51
M T +Q+ E +HH W LG +N D++L + I G++ I LA +L A+
Sbjct 27 MANTEAGSQVATEYVQHHLHHWQVSLGQGSFWQLNVDSLLVSGILGVVFI-LAMFLAARK 85
Query 52 TSTDVPGGVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQ- 110
++ VPG Q EA+ M V + + FV PLA+TIFV++++ N++ +LPV
Sbjct 86 ANSGVPGKFQNMIEAVWEWMDGMVANNYHHK-RDFVTPLALTIFVWVVLMNFMDLLPVDL 144
Query 111 -------YTDKHGHTTELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKG 163
+T H ++ +A ++ + +++A+F V ++ G++ + G
Sbjct 145 FGWIISFFTASHEAYFRVVPTADPNVTFAMSIAVFFLVIFYNLKAKGFGLIKEVLSSPFG 204
Query 164 HVTLLAPIN----LVEEVAKPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAF 219
L P+N LV+E+ KP+SLSLRLFGNIFAG ++ LIAL P + W IW F
Sbjct 205 --IWLFPLNIFFRLVDEIVKPVSLSLRLFGNIFAGELIFILIALLPWWFQWTLGGIWAIF 262
Query 220 DLFVGAIQAFIFALLTILYFSQAME 244
+ + IQAF+F +LT++Y + A E
Sbjct 263 HILIVLIQAFVFMMLTVVYLNMAQE 287
>gi|89257064|ref|YP_514426.1| F0F1 ATP synthase subunit A [Francisella tularensis subsp. holarctica
LVS]
gi|115315420|ref|YP_764143.1| F0F1 ATP synthase subunit A [Francisella tularensis subsp. holarctica
OSU18]
gi|167009451|ref|ZP_02274382.1| F0F1 ATP synthase subunit A [Francisella tularensis subsp. holarctica
FSC200]
gi|254368303|ref|ZP_04984322.1| ATP synthase A chain [Francisella tularensis subsp. holarctica
257]
gi|89144895|emb|CAJ80240.1| ATP synthase A chain [Francisella tularensis subsp. holarctica
LVS]
gi|115130319|gb|ABI83506.1| H(+)-transporting two-sector ATPase [Francisella tularensis subsp.
holarctica OSU18]
gi|134254112|gb|EBA53206.1| ATP synthase A chain [Francisella tularensis subsp. holarctica
257]
Length=263
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/265 (34%), Positives = 142/265 (54%), Gaps = 25/265 (9%)
Query 1 MTETILAAQI--EVGEHHTATW---LGM----TVNTDTVLSTAIAGLIVIALAFYLRAKV 51
M T +Q+ E +HH W LG +N D++L + I G++ I LA +L A+
Sbjct 1 MANTEAGSQVATEYVQHHLHHWQVSLGQGSFWQLNVDSLLVSGILGVVFI-LAMFLAARK 59
Query 52 TSTDVPGGVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQ- 110
++ VPG Q EA+ M V + + FV PLA+TIFV++++ N++ +LPV
Sbjct 60 ANSGVPGKFQNMIEAVWEWMDGMVANNYRHK-RDFVTPLALTIFVWVVLMNFMDLLPVDL 118
Query 111 -------YTDKHGHTTELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKG 163
+T H ++ +A ++ + +++A+F V ++ G++ + G
Sbjct 119 FGWIISFFTASHEAYFRVVPTADPNVTFAMSIAVFFLVIFYNLKAKGFGLIKEVLSSPFG 178
Query 164 HVTLLAPIN----LVEEVAKPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAF 219
L P+N LV+E+ KP+SLSLRLFGNIFAG ++ LIAL P + W IW F
Sbjct 179 --IWLFPLNIFFRLVDEIVKPVSLSLRLFGNIFAGELIFILIALLPWWFQWTLGGIWAIF 236
Query 220 DLFVGAIQAFIFALLTILYFSQAME 244
+ + IQAF+F +LT++Y + A E
Sbjct 237 HILIVLIQAFVFMMLTVVYLNMAQE 261
>gi|156503274|ref|YP_001429339.1| F0F1 ATP synthase subunit A [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|156253877|gb|ABU62383.1| ATP synthase F0, A subunit [Francisella tularensis subsp. holarctica
FTNF002-00]
Length=263
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/265 (34%), Positives = 142/265 (54%), Gaps = 25/265 (9%)
Query 1 MTETILAAQI--EVGEHHTATW---LGM----TVNTDTVLSTAIAGLIVIALAFYLRAKV 51
M T +Q+ E +HH W LG +N D++L + I G++ I LA +L A+
Sbjct 1 MANTEAGSQVATEYVQHHLHHWQVSLGQGSFWQLNVDSLLVSGILGVVFI-LAMFLAARK 59
Query 52 TSTDVPGGVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQ- 110
++ VPG Q EA+ M V + + FV PLA+TIFV++++ N++ +LPV
Sbjct 60 ANSGVPGKFQNMIEAVWEWMDGMVANNYCHK-RDFVTPLALTIFVWVVLMNFMDLLPVDL 118
Query 111 -------YTDKHGHTTELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKG 163
+T H ++ +A ++ + +++A+F V ++ G++ + G
Sbjct 119 FGWIISFFTASHEAYFRVVPTADPNVTFAMSIAVFFLVIFYNLKAKGFGLIKEVLSSPFG 178
Query 164 HVTLLAPIN----LVEEVAKPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAF 219
L P+N LV+E+ KP+SLSLRLFGNIFAG ++ LIAL P + W IW F
Sbjct 179 --IWLFPLNIFFRLVDEIVKPVSLSLRLFGNIFAGELIFILIALLPWWFQWTLGGIWAIF 236
Query 220 DLFVGAIQAFIFALLTILYFSQAME 244
+ + IQAF+F +LT++Y + A E
Sbjct 237 HILIVLIQAFVFMMLTVVYLNMAQE 261
>gi|56707237|ref|YP_169133.1| F0F1 ATP synthase subunit A [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110669707|ref|YP_666264.1| F0F1 ATP synthase subunit A [Francisella tularensis subsp. tularensis
FSC198]
gi|254369922|ref|ZP_04985930.1| ATP synthase A chain [Francisella tularensis subsp. tularensis
FSC033]
7 more sequence titles
Length=263
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/265 (34%), Positives = 142/265 (54%), Gaps = 25/265 (9%)
Query 1 MTETILAAQI--EVGEHHTATW---LGM----TVNTDTVLSTAIAGLIVIALAFYLRAKV 51
M T +Q+ E +HH W LG +N D++L + I G++ I LA +L A+
Sbjct 1 MANTEAGSQVATEYVQHHLHHWQVSLGQGSFWQLNVDSLLVSGILGVVFI-LAMFLAARK 59
Query 52 TSTDVPGGVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQ- 110
++ VPG Q EA+ M V + + FV PLA+TIFV++++ N++ +LPV
Sbjct 60 ANSGVPGKFQNMIEAVWEWMDGMVANNYHHK-RDFVTPLALTIFVWVVLMNFMDLLPVDL 118
Query 111 -------YTDKHGHTTELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKG 163
+T H ++ +A ++ + +++A+F V ++ G++ + G
Sbjct 119 FGWIISFFTASHEAYFRVVPTADPNVTFAMSIAVFFLVIFYNLKAKGFGLIKEVLSSPFG 178
Query 164 HVTLLAPIN----LVEEVAKPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAF 219
L P+N LV+E+ KP+SLSLRLFGNIFAG ++ LIAL P + W IW F
Sbjct 179 --IWLFPLNIFFRLVDEIVKPVSLSLRLFGNIFAGELIFILIALLPWWFQWTLGGIWAIF 236
Query 220 DLFVGAIQAFIFALLTILYFSQAME 244
+ + IQAF+F +LT++Y + A E
Sbjct 237 HILIVLIQAFVFMMLTVVYLNMAQE 261
>gi|118498214|ref|YP_899264.1| F0F1 ATP synthase subunit A [Francisella tularensis subsp. novicida
U112]
gi|194324398|ref|ZP_03058171.1| ATP synthase F0, A subunit [Francisella tularensis subsp. novicida
FTE]
gi|208780241|ref|ZP_03247583.1| ATP synthase F0, A subunit [Francisella novicida FTG]
6 more sequence titles
Length=263
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/265 (34%), Positives = 141/265 (54%), Gaps = 25/265 (9%)
Query 1 MTETILAAQI--EVGEHHTATW---LGM----TVNTDTVLSTAIAGLIVIALAFYLRAKV 51
M T +Q+ E +HH W LG +N D++L + I G++ I LA +L A+
Sbjct 1 MANTEAGSQVATEYVQHHLHHWQVSLGQGSFWQLNVDSLLVSGILGVVFI-LAMFLAARK 59
Query 52 TSTDVPGGVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQ- 110
++ VPG Q EA+ M V + FV PLA+TIFV++++ N++ +LPV
Sbjct 60 ANSGVPGKFQNMIEAVWEWMDGMVADNYHHK-RDFVTPLALTIFVWVVLMNFMDLLPVDL 118
Query 111 -------YTDKHGHTTELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKG 163
+T H ++ +A ++ + +++A+F V ++ G++ + G
Sbjct 119 FGWIISFFTASHEAYFRVVPTADPNVTFAMSIAVFFLVIFYNLKAKGFGLIKEVLSSPFG 178
Query 164 HVTLLAPIN----LVEEVAKPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAF 219
L P+N LV+E+ KP+SLSLRLFGNIFAG ++ LIAL P + W IW F
Sbjct 179 --IWLFPLNIFFRLVDEIVKPVSLSLRLFGNIFAGELIFILIALLPWWFQWTLGGIWAIF 236
Query 220 DLFVGAIQAFIFALLTILYFSQAME 244
+ + IQAF+F +LT++Y + A E
Sbjct 237 HILIVLIQAFVFMMLTVVYLNMAQE 261
>gi|332184767|gb|AEE27021.1| ATP synthase A chain [Francisella cf. novicida 3523]
Length=263
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/265 (34%), Positives = 141/265 (54%), Gaps = 25/265 (9%)
Query 1 MTETILAAQI--EVGEHHTATW---LGM----TVNTDTVLSTAIAGLIVIALAFYLRAKV 51
M T +Q+ E +HH W LG +N D++L + I G++ I+ A +L A+
Sbjct 1 MANTEAGSQVATEYVQHHLHHWQVSLGQGSFWQLNVDSLLVSVILGVVFIS-AMFLVARK 59
Query 52 TSTDVPGGVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQ- 110
++ VPG Q EA+ M V + FV PLA+TIFV++++ N++ +LPV
Sbjct 60 ANSGVPGKFQNMVEAVWEWMDGMVAENYHQK-RDFVTPLALTIFVWVVLMNFMDLLPVDL 118
Query 111 -------YTDKHGHTTELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKG 163
+T H ++ +A ++ + +++A+F V ++ G+V + G
Sbjct 119 FGWIISFFTTSHEAYFRVVPTADPNVTFAMSIAVFFLVIFYNLKAKGFGLVKEVLSAPFG 178
Query 164 HVTLLAPIN----LVEEVAKPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAF 219
L P+N LV+E+ KP+SLSLRLFGNIFAG ++ LIAL P + W IW F
Sbjct 179 --IWLFPLNIFFRLVDEIVKPVSLSLRLFGNIFAGELIFILIALLPWWFQWTLGGIWAIF 236
Query 220 DLFVGAIQAFIFALLTILYFSQAME 244
+ + IQAF+F +LT++Y + A E
Sbjct 237 HILIVLIQAFVFMMLTVVYLNMAQE 261
>gi|254369901|ref|ZP_04985910.1| ATP synthase A chain [Francisella tularensis subsp. holarctica
FSC022]
gi|157122871|gb|EDO66988.1| ATP synthase A chain [Francisella tularensis subsp. holarctica
FSC022]
Length=263
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/266 (34%), Positives = 145/266 (55%), Gaps = 27/266 (10%)
Query 1 MTETILAAQI--EVGEHHTATW---LGM----TVNTDTVLSTAIAGLIVIALAFYLRAKV 51
M T +Q+ E +HH W LG +N D++L + I G++ I LA +L A+
Sbjct 1 MANTEAGSQVATEYVQHHLHHWQVSLGQGSFWQLNVDSLLVSGILGVVFI-LAMFLAARK 59
Query 52 TSTDVPGGVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQ- 110
++ VPG Q EA+ M V + + FV PLA+TIFV++++ N++ +LPV
Sbjct 60 ANSGVPGKFQNMIEAVWEWMDGMVANNYHHK-RDFVTPLALTIFVWVVLMNFMDLLPVDL 118
Query 111 -------YTDKHGHTTELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKG 163
+T H ++ +A ++ + +++A+F V ++ G++ ++L
Sbjct 119 FGWIISFFTASHEAYFRVVPTADPNVTFAMSIAVFFLVIFYNLKAKGFGLIK---EVLSS 175
Query 164 HVTL-LAPIN----LVEEVAKPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKA 218
++ L P+N LV+E+ KP+SLSLRLFGNIFAG ++ LIAL P + W IW
Sbjct 176 PFSIWLFPLNIFFRLVDEIVKPVSLSLRLFGNIFAGELIFILIALLPWWFQWTLGGIWAI 235
Query 219 FDLFVGAIQAFIFALLTILYFSQAME 244
F + + IQAF+F +LT++Y + A E
Sbjct 236 FHILIVLIQAFVFMMLTVVYLNMAQE 261
>gi|187931014|ref|YP_001890998.1| F0F1 ATP synthase subunit A [Francisella tularensis subsp. mediasiatica
FSC147]
gi|187711923|gb|ACD30220.1| ATP synthase, F0 sector, subunit a [Francisella tularensis subsp.
mediasiatica FSC147]
Length=263
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/265 (34%), Positives = 142/265 (54%), Gaps = 25/265 (9%)
Query 1 MTETILAAQI--EVGEHHTATW---LGM----TVNTDTVLSTAIAGLIVIALAFYLRAKV 51
M T +Q+ E +HH W LG +N D++L + I G++ I LA +L A+
Sbjct 1 MANTEAGSQVATEYVQHHLHHWQVSLGQGSFWQLNVDSLLVSGILGVVFI-LAMFLAARK 59
Query 52 TSTDVPGGVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQ- 110
++ VPG Q EA+ M V + + FV PLA+TIFV++++ N++ +LPV
Sbjct 60 ANSGVPGKFQNMIEAVWEWMDGIVANNYHHK-RDFVTPLALTIFVWVVLMNFMDLLPVDL 118
Query 111 -------YTDKHGHTTELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKG 163
+T H ++ +A ++ + +++A+F V ++ G++ + G
Sbjct 119 FGWIISFFTASHEAYFRVVPTADPNVTFAMSIAVFFLVIFYNLKAKGFGLIKEVLSSPFG 178
Query 164 HVTLLAPIN----LVEEVAKPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAF 219
L P+N LV+E+ KP+SLSLRLFGNIFAG ++ LIAL P + W IW F
Sbjct 179 --IWLFPLNIFFRLVDEIVKPVSLSLRLFGNIFAGELIFILIALLPWWFQWTLGGIWAIF 236
Query 220 DLFVGAIQAFIFALLTILYFSQAME 244
+ + IQAF+F +LT++Y + A E
Sbjct 237 HILIVLIQAFVFMMLTVVYLNMAQE 261
>gi|254375022|ref|ZP_04990502.1| hypothetical protein FTDG_01210 [Francisella novicida GA99-3548]
gi|151572740|gb|EDN38394.1| hypothetical protein FTDG_01210 [Francisella novicida GA99-3548]
Length=263
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/265 (34%), Positives = 140/265 (53%), Gaps = 25/265 (9%)
Query 1 MTETILAAQI--EVGEHHTATW---LGM----TVNTDTVLSTAIAGLIVIALAFYLRAKV 51
M T +Q+ E +HH W LG +N D++L + I G++ I LA +L A+
Sbjct 1 MANTEAGSQVATEYVQHHLHHWQVSLGQGSFWQLNVDSLLVSGILGVVFI-LAMFLAARK 59
Query 52 TSTDVPGGVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQY 111
++ VPG Q EA+ M V + FV PLA+TIFV++++ N++ +LPV
Sbjct 60 ANSGVPGKFQNMIEAVWEWMDGMVADNYHYK-RDFVTPLALTIFVWVVLMNFMDLLPVDL 118
Query 112 --------TDKHGHTTELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKG 163
T H ++ +A ++ + +++A+F V ++ G++ + G
Sbjct 119 FGWVISFSTASHEAYFRVVPTADPNVTFAMSIAVFFLVIFYNLKAKGFGLIKEVLSSPFG 178
Query 164 HVTLLAPIN----LVEEVAKPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAF 219
L P+N LV+E+ KP+SLSLRLFGNIFAG ++ LIAL P + W IW F
Sbjct 179 --IWLFPLNIFFRLVDEIVKPVSLSLRLFGNIFAGELIFILIALLPWWFQWTLGGIWAIF 236
Query 220 DLFVGAIQAFIFALLTILYFSQAME 244
+ + IQAF+F +LT++Y + A E
Sbjct 237 HILIVLIQAFVFMMLTVVYLNMAQE 261
>gi|134301272|ref|YP_001121240.1| F0F1 ATP synthase subunit A [Francisella tularensis subsp. tularensis
WY96-3418]
gi|134049049|gb|ABO46120.1| ATP synthase F0, A subunit [Francisella tularensis subsp. tularensis
WY96-3418]
Length=263
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/265 (33%), Positives = 141/265 (54%), Gaps = 25/265 (9%)
Query 1 MTETILAAQI--EVGEHHTATW---LGM----TVNTDTVLSTAIAGLIVIALAFYLRAKV 51
M T +Q+ E +HH W LG +N D++L + I G++ I LA +L A+
Sbjct 1 MANTEAGSQVATEYVQHHLHHWQVSLGQGSFWQLNVDSLLVSGILGVVFI-LAMFLAARK 59
Query 52 TSTDVPGGVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQ- 110
++ VPG Q EA+ M V + + FV PL +TIFV++++ N++ +LPV
Sbjct 60 ANSGVPGKFQNMIEAVWEWMDGMVANNYHHK-RDFVTPLVLTIFVWVVLMNFMDLLPVDL 118
Query 111 -------YTDKHGHTTELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKG 163
+T H ++ +A ++ + +++A+F V ++ G++ + G
Sbjct 119 FGWIISFFTASHEAYFRVVPTADPNVTFAMSIAVFFLVIFYNLKAKGFGLIKEVLSSPFG 178
Query 164 HVTLLAPIN----LVEEVAKPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAF 219
L P+N LV+E+ KP+SLSLRLFGNIFAG ++ LIAL P + W IW F
Sbjct 179 --IWLFPLNIFFRLVDEIVKPVSLSLRLFGNIFAGELIFILIALLPWWFQWTLGGIWAIF 236
Query 220 DLFVGAIQAFIFALLTILYFSQAME 244
+ + IQAF+F +LT++Y + A E
Sbjct 237 HILIVLIQAFVFMMLTVVYLNMAQE 261
>gi|338812426|ref|ZP_08624602.1| ATP synthase F0, A subunit [Acetonema longum DSM 6540]
gi|337275597|gb|EGO64058.1| ATP synthase F0, A subunit [Acetonema longum DSM 6540]
Length=225
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/241 (35%), Positives = 135/241 (57%), Gaps = 22/241 (9%)
Query 11 EVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGV-QLFFEAITI 69
+G+H T G+ + DT++ T I VI L ++ + VP Q+F E +
Sbjct 6 HIGQHTVVTLGGLIFHMDTLIMTWITMAAVI-LVVFIATRGLERGVPKRRWQVFIEMVVE 64
Query 70 QMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTELLKSAAADI 129
+ +Q+E G + P + PL +T+F++++ +NWL ++P ++ S D+
Sbjct 65 GLIDQLEKTAGPKAKP-IAPLIITLFLYLMFANWLGLVPGGFS-----------SPTVDL 112
Query 130 NYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKPISLSLRLFG 189
N L +A+ + + H G R GI H L + H L PINL+EE++KP+++SLRLFG
Sbjct 113 NTTLGMAVMIALSVHVIGASRNGI-SHFGHLFQPHWVFL-PINLMEEISKPLTMSLRLFG 170
Query 190 NIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILYFSQAMELEEEH 249
NI AG IL+ ++++ P++ AP A W AF +FVG +QA IF +L+I+ S A ++H
Sbjct 171 NILAGEILLIILSMLVPWV--APTA-WLAFSVFVGIVQALIFTILSIVSLSGAF---KDH 224
Query 250 H 250
H
Sbjct 225 H 225
>gi|254876286|ref|ZP_05248996.1| F0F1 ATP synthase subunit A [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842307|gb|EET20721.1| F0F1 ATP synthase subunit A [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length=263
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/265 (33%), Positives = 140/265 (53%), Gaps = 25/265 (9%)
Query 1 MTETILAAQI--EVGEHHTATW---LG----MTVNTDTVLSTAIAGLIVIALAFYLRAKV 51
M T +Q+ E +HH W LG +N D++L + + G++ I LA ++ A+
Sbjct 1 MANTEAGSQVATEYVQHHLHHWQISLGEGSFWQLNVDSLLVSGVLGIVFI-LAMFMAARR 59
Query 52 TSTDVPGGVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQ- 110
+ VPG Q EA+ M V + FV PLA+TIFV++++ N + +LPV
Sbjct 60 ANAGVPGKFQNMIEAVWEWMDGMVAENYHHK-RDFVTPLALTIFVWVVLMNLMDLLPVDL 118
Query 111 -------YTDKHGHTTELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKG 163
+T+ H ++ +A ++ + +++A+F V ++ G++ + G
Sbjct 119 FGWIISFFTNSHEVYFRVVPTADPNVTFAMSIAVFFLVIFYNLKAKGFGLLKEILSSPFG 178
Query 164 HVTLLAPIN----LVEEVAKPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAF 219
L P+N LV+E+ KP+SLSLRLFGNIFAG ++ LIAL P + W IW F
Sbjct 179 --IWLFPLNIFFRLVDEIVKPVSLSLRLFGNIFAGELIFILIALLPWWFQWTLGGIWAIF 236
Query 220 DLFVGAIQAFIFALLTILYFSQAME 244
+ + IQAF+F +LT++Y + A E
Sbjct 237 HILIVLIQAFVFMMLTVVYLNMAQE 261
>gi|258517240|ref|YP_003193462.1| ATP synthase F0, A subunit [Desulfotomaculum acetoxidans DSM
771]
gi|257780945|gb|ACV64839.1| ATP synthase F0, A subunit [Desulfotomaculum acetoxidans DSM
771]
Length=246
Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/230 (37%), Positives = 125/230 (55%), Gaps = 23/230 (10%)
Query 26 NTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGVQLFFEAITIQMRNQVESAIGMRIAP 85
N T++ T I +IV+A+ + + S PG +Q E + ++ IG R A
Sbjct 35 NPKTLVMTWIT-MIVVAVFLLMATRNMSMRKPGKLQTVVELLYDFIKGLAFDNIGARKAA 93
Query 86 FVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTELLKSAAADINYVLALALFVFVCYHT 145
++PL TIF+++L SN L ++P + S+ AD N + +ALFVF
Sbjct 94 PLMPLLCTIFIYLLFSNLLGLIPT------------MSSSTADKNTTIGMALFVFCLLWY 141
Query 146 AGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKPISLSLRLFGNIFAGGILVA-LIALF 204
G +G GH +K L P+NL+EEVA+P +L+ RLFGNI+ G +L+A L+ L
Sbjct 142 QGFKYKG-PGHLKHFIK-PFPLFLPLNLIEEVARPTTLAFRLFGNIYGGEVLIAVLLGLI 199
Query 205 PPYIM----WAPNAIWKAFDLFVGAIQAFIFALLTILYFSQAMELEEEHH 250
P ++ + P+ IW AF +FVG IQAFIF +LTI Y SQ + EHH
Sbjct 200 PTSVVFFGGFIPSVIWLAFSIFVGFIQAFIFTMLTIAYTSQVV---AEHH 246
>gi|337754574|ref|YP_004647085.1| ATP synthase subunit A [Francisella sp. TX077308]
gi|336446179|gb|AEI35485.1| ATP synthase A chain [Francisella sp. TX077308]
Length=263
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/265 (33%), Positives = 139/265 (53%), Gaps = 25/265 (9%)
Query 1 MTETILAAQI--EVGEHHTATW---LG----MTVNTDTVLSTAIAGLIVIALAFYLRAKV 51
M T +Q+ E +HH W LG +N D++L + + G++ I LA ++ A+
Sbjct 1 MANTEAGSQVATEYVQHHLHHWQISLGEGSFWQLNVDSLLVSGVLGVVFI-LAMFMAARK 59
Query 52 TSTDVPGGVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQ- 110
+ VPG Q EA+ M V + FV PLA+TIFV++++ N + +LPV
Sbjct 60 ANAGVPGRFQNMIEAVWEWMDGMVAENYHHK-RDFVTPLALTIFVWVVLMNLMDLLPVDL 118
Query 111 -------YTDKHGHTTELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKG 163
+T H ++ +A ++ + +++A+F V ++ G++ + G
Sbjct 119 FGWIISFFTSSHDVYFRVVPTADPNVTFAMSIAVFFLVVFYNLKAKGFGLLKEILSSPFG 178
Query 164 HVTLLAPIN----LVEEVAKPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAF 219
L P+N LV+E+ KP+SLSLRLFGNIFAG ++ LIAL P + W IW F
Sbjct 179 --IWLFPLNIFFRLVDEIVKPVSLSLRLFGNIFAGELIFILIALLPWWFQWTLGGIWAIF 236
Query 220 DLFVGAIQAFIFALLTILYFSQAME 244
+ + IQAF+F +LT++Y + A E
Sbjct 237 HILIVLIQAFVFMMLTVVYLNMAQE 261
>gi|167627180|ref|YP_001677680.1| F0F1 ATP synthase subunit A [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597181|gb|ABZ87179.1| ATP synthase, F0 sector, subunit A [Francisella philomiragia
subsp. philomiragia ATCC 25017]
Length=263
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/265 (33%), Positives = 139/265 (53%), Gaps = 25/265 (9%)
Query 1 MTETILAAQI--EVGEHHTATW---LG----MTVNTDTVLSTAIAGLIVIALAFYLRAKV 51
M T +Q+ E +HH W LG +N D++L + + G++ I LA ++ A+
Sbjct 1 MANTEAGSQVATEYVQHHLHHWQISLGEGSFWQLNVDSLLVSGVLGIVFI-LAMFMAARR 59
Query 52 TSTDVPGGVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQ- 110
+ VPG Q EA+ M V + FV PLA+TIFV++++ N + +LPV
Sbjct 60 ANAGVPGKFQNMIEAVWEWMDGMVAENYHHK-RDFVTPLALTIFVWVVLMNLMDLLPVDL 118
Query 111 -------YTDKHGHTTELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKG 163
+T+ H ++ +A ++ + +++ +F V ++ G++ + G
Sbjct 119 FGWIISFFTNSHEVYFRVVPTADPNVTFAMSIVVFFLVIFYNLKAKGFGLLKEILSSPFG 178
Query 164 HVTLLAPIN----LVEEVAKPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAF 219
L P+N LV+E+ KP+SLSLRLFGNIFAG ++ LIAL P + W IW F
Sbjct 179 --IWLFPLNIFFRLVDEIVKPVSLSLRLFGNIFAGELIFILIALLPWWFQWTLGGIWAIF 236
Query 220 DLFVGAIQAFIFALLTILYFSQAME 244
+ + IQAF+F +LT++Y + A E
Sbjct 237 HILIVLIQAFVFMMLTVVYLNMAQE 261
>gi|90413748|ref|ZP_01221736.1| ATP synthase subunit A [Photobacterium profundum 3TCK]
gi|90325217|gb|EAS41714.1| ATP synthase subunit A [Photobacterium profundum 3TCK]
Length=262
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/238 (37%), Positives = 133/238 (56%), Gaps = 16/238 (6%)
Query 24 TVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGVQLFFEAITIQMRNQVESAIGMRI 83
TV+ D++ + + GLI + L F+ AK ++ VP +Q F E + + N V+ R
Sbjct 30 TVHIDSLFFSVLTGLIFLGL-FHSVAKKATSGVPSKLQCFVEIMVEFVDNNVKDTFHGR- 87
Query 84 APFVLPLAVTIFVFILISNWLAVLPVQ---YTDKHGHTTELLKSA-AADINYVLALALFV 139
P V PLA+TIF +I++ N + ++P+ Y +HG LK AD+N +A+AL V
Sbjct 88 NPLVAPLALTIFCWIMLMNIMDLVPIDFLPYAAEHGLGIPYLKVVPTADVNITMAMALGV 147
Query 140 F--VCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEV----AKPISLSLRLFGNIFA 193
F + Y++ + G + L + ++ P NL+ E+ AKPISL +RLFGN+FA
Sbjct 148 FALMIYYSIKVKGLGGFAKELALHPFNHPIMIPFNLLLEIVSLLAKPISLGMRLFGNMFA 207
Query 194 GGILVALIA-LFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILYFSQAMELEEEHH 250
G ++ LIA L P + W + W F + V IQAF+F +LTI+Y SQA E++H
Sbjct 208 GEVVFILIAALMPWWAQWLGSVPWAIFHILVITIQAFVFMMLTIVYLSQA---HEDNH 262
>gi|134300987|ref|YP_001114483.1| ATP synthase F0 subunit A [Desulfotomaculum reducens MI-1]
gi|223634855|sp|A4J9A5.1|ATP6_DESRM RecName: Full=ATP synthase subunit a; AltName: Full=ATP synthase
F0 sector subunit a; AltName: Full=F-ATPase subunit 6
gi|134053687|gb|ABO51658.1| ATP synthase F0 subcomplex A subunit [Desulfotomaculum reducens
MI-1]
Length=262
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/241 (34%), Positives = 131/241 (55%), Gaps = 31/241 (12%)
Query 21 LGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGVQLFFEAITIQMRNQVESAIG 80
+G++++ T++ T I +V+ A + K + PG Q FE + + QV S +G
Sbjct 42 MGLSISPRTMIMTWITMALVLLFA-WACTKNQNVRSPGKAQATFEVLWEFLGGQVFSNLG 100
Query 81 MRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTELLKSAAADINYVLALALFVF 140
++ ++P+ VT F++I+ +N L ++P L S AD N LAL V
Sbjct 101 NKLGAAMMPIIVTFFIYIVFANLLGLIPT------------LSSPTADKNTTFGLALIVV 148
Query 141 VCYHTAGIWRRGI---VGHPIKLLKGHVTLLAPINLVEEVAKPISLSLRLFGNIFAGGIL 197
+ H G+ G+ +GH + K V I+L+EE+A+P++L+ RL+GNIFAG +L
Sbjct 149 LLIHYHGLKANGVGGHIGHYFQPFKPFVV----IHLIEEIARPVTLAFRLYGNIFAGEVL 204
Query 198 VALI--------ALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILYFSQAMELEEEH 249
+A++ +F +I P+ IW AF +FVG +QAF+F++LTI Y SQ E +H
Sbjct 205 IAVLLGLININAYVFGGFI---PSVIWLAFSVFVGFVQAFVFSMLTIAYVSQFAAHEADH 261
Query 250 H 250
H
Sbjct 262 H 262
>gi|313891472|ref|ZP_07825088.1| ATP synthase F0, A subunit [Dialister microaerophilus UPII 345-E]
gi|329121459|ref|ZP_08250083.1| ATP synthase F0 sector subunit A [Dialister micraerophilus DSM
19965]
gi|313120247|gb|EFR43423.1| ATP synthase F0, A subunit [Dialister microaerophilus UPII 345-E]
gi|327469374|gb|EGF14844.1| ATP synthase F0 sector subunit A [Dialister micraerophilus DSM
19965]
Length=221
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/236 (36%), Positives = 120/236 (51%), Gaps = 16/236 (6%)
Query 9 QIEVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGVQLFFEAIT 68
+ G H A +LGM VN DT+ +T + +IV + F A VP G+Q E +
Sbjct 2 HLHTGTHVVAQFLGMGVNLDTLFTTWLTAIIVFIVVF--MASRGRALVPSGIQNAVEFVI 59
Query 69 IQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTELLKSAAAD 128
+ +Q E +G V L +T+F+FI ++N + +LP T L S D
Sbjct 60 EALCDQFEKNVGKNYRQVVYVL-LTLFMFIFVANEIGLLP---------TEHLTASPTND 109
Query 129 INYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKPISLSLRLF 188
+N L LA+ + H I G GH IK + IN+VEE++KPI+L++RLF
Sbjct 110 VNTTLGLAIGSSLFVHFFKIKNSGF-GHWIKHFFQPMPFFVVINVVEEISKPITLAMRLF 168
Query 189 GNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILYFSQAME 244
GNI AG IL+ ++ P W IW AF LFVG IQ++IF L +Y ++E
Sbjct 169 GNILAGEILLEILCFMAP---WLVPIIWIAFSLFVGLIQSYIFTTLVSIYLKSSVE 221
>gi|330447614|ref|ZP_08311262.1| ATP synthase F0, A subunit [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491805|dbj|GAA05759.1| ATP synthase F0, A subunit [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length=255
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/260 (35%), Positives = 139/260 (54%), Gaps = 19/260 (7%)
Query 3 ETILAAQIEVGEHHTATWLG---MTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGG 59
E++ A + H T +G ++N D++ + GL+ I L Y+ + TS VPG
Sbjct 2 ESVTTAHDYIEHHLTFLTVGDGFWSLNIDSMFMVWVLGLLFIGLFRYVAIRGTS-GVPGR 60
Query 60 VQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHT- 118
+Q F E IT + N + I + V PLA+TIFV++ + N + ++PV +
Sbjct 61 LQCFIE-ITYEFVNNLVKEIFQTKSKIVGPLALTIFVWVFLMNMIDLIPVDFVPTLAREL 119
Query 119 --TELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHV---TLLAPINL 173
T +AD+N +++A+ VF+ + +G+VG IK L LL P+N
Sbjct 120 GFTHFRDLPSADVNVPMSMAIGVFILIIGYTLKNKGLVGF-IKELTTQPFEHPLLYPVNF 178
Query 174 VEE----VAKPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAF 229
V E ++KPISL LRLFGN++AG ++ LIAL P +I WA + W F + + +QAF
Sbjct 179 VLELVTLISKPISLGLRLFGNMYAGEMIFILIALMPWWIQWALSVPWALFHILIVFLQAF 238
Query 230 IFALLTILYFSQAMELEEEH 249
IF +LT++Y + A EEH
Sbjct 239 IFMVLTVVYLAMA---TEEH 255
>gi|292670137|ref|ZP_06603563.1| H(+)-transporting two-sector ATPase, F(0) subunit A [Selenomonas
noxia ATCC 43541]
gi|292648236|gb|EFF66208.1| H(+)-transporting two-sector ATPase, F(0) subunit A [Selenomonas
noxia ATCC 43541]
Length=225
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/237 (34%), Positives = 124/237 (53%), Gaps = 15/237 (6%)
Query 11 EVGEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGGVQLFFEAITIQ 70
E+G G T N+ T++ T I+ ++V+ + +L + Q+ E I
Sbjct 3 EIGVREAVQIAGFTFNSQTLVMTWISMVVVLFIG-WLAVRNLKIVPTSNWQVMLEMIIDS 61
Query 71 MRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTELLKSAAADIN 130
+ Q E ++G R F+ L V++F+F+L+SNW+ ++P + S D+N
Sbjct 62 LHEQAEESMGARGRGFLSMLIVSLFLFLLVSNWIGLIPT------------MASPTNDLN 109
Query 131 YVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKPISLSLRLFGN 190
L LAL V V H G++ +G+ H I IN+VEE+AKPI+LS RLFGN
Sbjct 110 TTLGLALLVIVMTHVLGLYVKGM--HYIAHFFQPFAPFVIINIVEELAKPITLSFRLFGN 167
Query 191 IFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILYFSQAMELEE 247
I AG IL+ ++ L P+ IW AF +F+G +QAFIF +L+ Y A++ E+
Sbjct 168 ILAGEILIHILLLLLGNYSTVPSVIWIAFSIFIGGVQAFIFTMLSTAYIGSAIKTED 224
>gi|269104948|ref|ZP_06157644.1| ATP synthase A chain [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268161588|gb|EEZ40085.1| ATP synthase A chain [Photobacterium damselae subsp. damselae
CIP 102761]
Length=255
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/258 (35%), Positives = 139/258 (54%), Gaps = 22/258 (8%)
Query 3 ETILAAQIEVGEHHTATWLGM---TVNTDTVLSTAIAGLIVIALAFYLRAKVTSTDVPGG 59
+T+ A + H T +G ++N D++L + GL+ I L Y+ + TS VPG
Sbjct 2 DTVTTAHDYIEHHMTFLTVGKGFWSINLDSMLMVWVLGLLFIGLFRYVVTRGTS-GVPGR 60
Query 60 VQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDK----- 114
+Q F E +T + N + I + PL++TIFV++ + N + +LPV +
Sbjct 61 LQCFVE-VTFEFVNNLVKEIFKTDDKLIGPLSLTIFVWVFLMNTIDLLPVDFIPHVMGLL 119
Query 115 -HGHTTELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHV---TLLAP 170
GH +L +AD+N +++A+ VF+ +G VG IK L LL P
Sbjct 120 GFGHFRDL---PSADVNVPMSMAIGVFILIIGYTFKNKGFVGF-IKELTTQPFENPLLYP 175
Query 171 INLVEE----VAKPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAI 226
+N V E ++KPISL LRLFGN++AG ++ LIAL P ++ WA + W F + + +
Sbjct 176 VNFVLELVTLISKPISLGLRLFGNMYAGEMIFILIALMPWWMQWALSVPWALFHILIVFL 235
Query 227 QAFIFALLTILYFSQAME 244
QAFIF +LTI+Y + A+E
Sbjct 236 QAFIFMVLTIVYLAMAVE 253
>gi|261253527|ref|ZP_05946100.1| ATP synthase A chain [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|260936918|gb|EEX92907.1| ATP synthase A chain [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342811552|gb|EGU46589.1| F0F1 ATP synthase subunit A [Vibrio orientalis CIP 102891 = ATCC
33934]
Length=256
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/264 (35%), Positives = 139/264 (53%), Gaps = 26/264 (9%)
Query 3 ETILAAQIEVGEHH-------TATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTD 55
E++ +A E EHH T W +N D++ I GL+ I L + +K TS
Sbjct 2 ESVQSAH-EYIEHHLTFLTKGTGFW---AINMDSMFMVWILGLLFIGLFRFAVSKGTS-G 56
Query 56 VPGGVQLFFEAITIQMRNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKH 115
VPG +Q F E + + N + S I + P+A+TIFV++L+ N + ++PV +
Sbjct 57 VPGRLQCFVE-VVFEFVNNLVSEIFQSKDRLIGPMALTIFVWVLLMNAIDLIPVDFIPAF 115
Query 116 GHT---TELLKSAAADINYVLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHV---TLLA 169
+AD+N +++AL VF + +G++G IK L LL
Sbjct 116 ARMLGFEHFRDLPSADVNVAMSMALGVFFLVIIYTLKAKGLIGF-IKELTTQPFQHPLLY 174
Query 170 PINLVEE----VAKPISLSLRLFGNIFAGGILVALIALFPPYIMWAPNAIWKAFDLFVGA 225
P+N V E ++KPISL LRLFGN++AG ++ LIAL P ++ WA + W F + +
Sbjct 175 PVNFVLELVTLISKPISLGLRLFGNMYAGEMIFILIALMPWWMQWALSVPWALFHILIVC 234
Query 226 IQAFIFALLTILYFSQAMELEEEH 249
+QAFIF +LT++Y AM +EE H
Sbjct 235 LQAFIFMVLTVVYL--AMAVEENH 256
>gi|220932623|ref|YP_002509531.1| ATP synthase F0 subunit A [Halothermothrix orenii H 168]
gi|219993933|gb|ACL70536.1| ATP synthase F0, A subunit [Halothermothrix orenii H 168]
Length=216
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/231 (35%), Positives = 128/231 (56%), Gaps = 21/231 (9%)
Query 13 GEHHTATWLGMTVNTDTVLSTAIAGLIVIALAFYLRAKVTSTD-VPGGVQLFFEAITIQM 71
G ++GM + TDT++ ++ ++VI L + + + VPG +Q E + +
Sbjct 4 GPKVVTQFMGMPI-TDTLI---VSWVVVILLIIFSKIVTRRLEMVPGRLQSAVELLITSI 59
Query 72 RNQVESAIGMRIAPFVLPLAVTIFVFILISNWLAVLPVQYTDKHGHTTELLKSAAADINY 131
+Q+E+ + R + F LP TIF++I +SN + V+P + + D+N
Sbjct 60 EDQIETMLPGRGSKF-LPFIATIFIYIGVSNIIGVIPG------------VANPTGDLNT 106
Query 132 VLALALFVFVCYHTAGIWRRGIVGHPIKLLKGHVTLLAPINLVEEVAKPISLSLRLFGNI 191
L LAL VF+ G+ ++G+ G+ +K V + PIN++ E+AKPIS S RLFGNI
Sbjct 107 TLGLALVVFLVSQYYGVRKKGLWGY-LKGFGEPVVFMLPINIIGELAKPISHSFRLFGNI 165
Query 192 FAGGILVALIALFPPYIMWAPNAIWKAFDLFVGAIQAFIFALLTILYFSQA 242
AGGIL+ ++ F P+++ P W FDLF+G +QA IF +L I Y S A
Sbjct 166 VAGGILLGIVFQFAPWLIPVPLHAW--FDLFIGLVQALIFGMLAIAYISIA 214
Lambda K H
0.328 0.141 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 358945203960
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40