BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1305
Length=81
Score E
Sequences producing significant alignments: (Bits) Value
gi|148822523|ref|YP_001287277.1| F0F1 ATP synthase subunit C [My... 154 3e-36
gi|15608445|ref|NP_215821.1| F0F1 ATP synthase subunit C [Mycoba... 153 9e-36
gi|118619163|ref|YP_907495.1| F0F1 ATP synthase subunit C [Mycob... 152 1e-35
gi|56266612|emb|CAI26297.1| ATP synthase c chain [Mycobacterium ... 151 4e-35
gi|15827571|ref|NP_301834.1| F0F1 ATP synthase subunit C [Mycoba... 117 7e-25
gi|87247475|gb|ABD35820.1| AtpE [Mycobacterium aurum] 116 9e-25
gi|145222901|ref|YP_001133579.1| F0F1 ATP synthase subunit C [My... 115 2e-24
gi|108800845|ref|YP_641042.1| F0F1 ATP synthase subunit C [Mycob... 114 6e-24
gi|169628539|ref|YP_001702188.1| F0F1 ATP synthase subunit C [My... 111 4e-23
gi|83588796|gb|ABC24994.1| subunit c of ATP synthase [Mycobacter... 110 9e-23
gi|296139995|ref|YP_003647238.1| ATP synthase F0 subunit chi [Ts... 102 3e-20
gi|83588794|gb|ABC24993.1| subunit c of ATP synthase [Mycobacter... 101 4e-20
gi|41408554|ref|NP_961390.1| F0F1 ATP synthase subunit C [Mycoba... 100 7e-20
gi|296138977|ref|YP_003646220.1| ATP synthase F0 subunit chi [Ts... 99.0 2e-19
gi|254774344|ref|ZP_05215860.1| F0F1 ATP synthase subunit C [Myc... 95.1 3e-18
gi|87247483|gb|ABD35824.1| AtpE [Mycobacterium fortuitum] 95.1 3e-18
gi|87247481|gb|ABD35823.1| AtpE [Mycobacterium peregrinum] 95.1 3e-18
gi|56266614|emb|CAI26298.1| ATP synthase c chain [Mycobacterium ... 95.1 3e-18
gi|118467835|ref|YP_889193.1| F0F1 ATP synthase subunit C [Mycob... 95.1 3e-18
gi|343928066|ref|ZP_08767531.1| ATP synthase subunit c [Gordonia... 94.4 5e-18
gi|120405287|ref|YP_955116.1| F0F1 ATP synthase subunit C [Mycob... 92.8 1e-17
gi|262201855|ref|YP_003273063.1| ATP synthase F0 subunit C [Gord... 92.4 2e-17
gi|117927856|ref|YP_872407.1| F0F1 ATP synthase subunit C [Acido... 77.0 8e-13
gi|296393123|ref|YP_003658007.1| ATP synthase F0 subunit C [Segn... 75.1 3e-12
gi|317506173|ref|ZP_07963994.1| ATP synthase subunit C protein [... 75.1 3e-12
gi|255658911|ref|ZP_05404320.1| ATP synthase F0, C subunit [Mits... 68.9 2e-10
gi|313896946|ref|ZP_07830493.1| ATP synthase F0, C subunit [Sele... 68.2 4e-10
gi|331695528|ref|YP_004331767.1| ATP synthase subunit c [Pseudon... 67.8 5e-10
gi|334127137|ref|ZP_08501066.1| ATP synthase F0 sector subunit C... 67.4 6e-10
gi|238927820|ref|ZP_04659580.1| H(+)-transporting two-sector ATP... 67.4 6e-10
gi|260886474|ref|ZP_05897737.1| ATP synthase F0, C subunit [Sele... 65.1 4e-09
gi|292670136|ref|ZP_06603562.1| H(+)-transporting two-sector ATP... 65.1 4e-09
gi|291534222|emb|CBL07335.1| ATP synthase F0 subcomplex C subuni... 63.9 8e-09
gi|342214239|ref|ZP_08706940.1| ATP synthase F0, C subunit [Veil... 62.8 1e-08
gi|323140889|ref|ZP_08075802.1| ATP synthase F0, C subunit [Phas... 60.1 1e-07
gi|261856904|ref|YP_003264187.1| ATP synthase F0 C subunit [Halo... 58.9 2e-07
gi|11467019|ref|NP_041926.1| ATP synthase CF0 C subunit [Euglena... 58.9 3e-07
gi|113170456|ref|YP_717248.1| AtpH [Ostreococcus tauri] >gi|1128... 58.5 3e-07
gi|224178031|ref|YP_002600943.1| CF0 subunit III of ATP synthase... 58.2 4e-07
gi|226968662|ref|YP_002808622.1| ATP synthase CF0 subunit C [Mic... 57.8 6e-07
gi|290969218|ref|ZP_06560743.1| ATP synthase F0, C subunit [Mega... 57.0 9e-07
gi|224179487|ref|YP_002601012.1| CF0 subunit III of ATP synthase... 56.6 1e-06
gi|334144692|ref|YP_004537848.1| ATP synthase subunit c [Thioalk... 56.6 1e-06
gi|88811298|ref|ZP_01126554.1| ATP synthase F0, C subunit [Nitro... 56.2 1e-06
gi|78486507|ref|YP_392432.1| ATP synthase F0, C subunit [Thiomic... 56.2 2e-06
gi|114777378|ref|ZP_01452375.1| ATP synthase F0, C subunit [Mari... 56.2 2e-06
gi|118411027|ref|YP_874422.1| ATP synthase CF0 C chain subunit I... 55.8 2e-06
gi|298370412|ref|ZP_06981728.1| ATP synthase F0, C subunit [Neis... 55.8 2e-06
gi|294668633|ref|ZP_06733729.1| ATP synthase F0, C subunit [Neis... 55.5 3e-06
gi|294789018|ref|ZP_06754258.1| ATP synthase F0, C subunit [Simo... 55.1 3e-06
>gi|148822523|ref|YP_001287277.1| F0F1 ATP synthase subunit C [Mycobacterium tuberculosis F11]
gi|253799649|ref|YP_003032650.1| ATP synthase subunit C atpE [Mycobacterium tuberculosis KZN 1435]
gi|254231563|ref|ZP_04924890.1| ATP synthase C chain atpE (lipid-binding protein) [Mycobacterium
tuberculosis C]
14 more sequence titles
Length=95
Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/81 (100%), Positives = 81/81 (100%), Gaps = 0/81 (0%)
Query 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 60
MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV
Sbjct 15 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 74
Query 61 EAAYFINLAFMALFVFATPVK 81
EAAYFINLAFMALFVFATPVK
Sbjct 75 EAAYFINLAFMALFVFATPVK 95
>gi|15608445|ref|NP_215821.1| F0F1 ATP synthase subunit C [Mycobacterium tuberculosis H37Rv]
gi|15840756|ref|NP_335793.1| F0F1 ATP synthase subunit C [Mycobacterium tuberculosis CDC1551]
gi|31792498|ref|NP_854991.1| F0F1 ATP synthase subunit C [Mycobacterium bovis AF2122/97]
68 more sequence titles
Length=81
Score = 153 bits (386), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 81/81 (100%), Positives = 81/81 (100%), Gaps = 0/81 (0%)
Query 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 60
MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV
Sbjct 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 60
Query 61 EAAYFINLAFMALFVFATPVK 81
EAAYFINLAFMALFVFATPVK
Sbjct 61 EAAYFINLAFMALFVFATPVK 81
>gi|118619163|ref|YP_907495.1| F0F1 ATP synthase subunit C [Mycobacterium ulcerans Agy99]
gi|183984063|ref|YP_001852354.1| ATP synthase C chain AtpE [Mycobacterium marinum M]
gi|254810013|sp|B2HQK7.1|ATPL_MYCMM RecName: Full=ATP synthase subunit c; AltName: Full=ATP synthase
F(0) sector subunit c; AltName: Full=F-type ATPase subunit
c; Short=F-ATPase subunit c; AltName: Full=Lipid-binding
protein
gi|254810017|sp|A0PUK5.1|ATPL_MYCUA RecName: Full=ATP synthase subunit c; AltName: Full=ATP synthase
F(0) sector subunit c; AltName: Full=F-type ATPase subunit
c; Short=F-ATPase subunit c; AltName: Full=Lipid-binding
protein
gi|83588802|gb|ABC24997.1| subunit c of ATP synthase [Mycobacterium ulcerans]
gi|83588804|gb|ABC24998.1| subunit c of ATP synthase [Mycobacterium marinum]
gi|118571273|gb|ABL06024.1| ATP synthase C chain AtpE [Mycobacterium ulcerans Agy99]
gi|183177389|gb|ACC42499.1| ATP synthase C chain AtpE [Mycobacterium marinum M]
Length=81
Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/81 (99%), Positives = 81/81 (100%), Gaps = 0/81 (0%)
Query 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 60
MDPTIAAGALIGGGLIMAGGAIGAGIGDG+AGNALISGVARQPEAQGRLFTPFFITVGLV
Sbjct 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGIAGNALISGVARQPEAQGRLFTPFFITVGLV 60
Query 61 EAAYFINLAFMALFVFATPVK 81
EAAYFINLAFMALFVFATPVK
Sbjct 61 EAAYFINLAFMALFVFATPVK 81
>gi|56266612|emb|CAI26297.1| ATP synthase c chain [Mycobacterium tuberculosis]
Length=81
Score = 151 bits (381), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/81 (99%), Positives = 80/81 (99%), Gaps = 0/81 (0%)
Query 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 60
MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV
Sbjct 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 60
Query 61 EAAYFINLAFMALFVFATPVK 81
EA YFINLAFMALFVFATPVK
Sbjct 61 EAPYFINLAFMALFVFATPVK 81
>gi|15827571|ref|NP_301834.1| F0F1 ATP synthase subunit C [Mycobacterium leprae TN]
gi|221230048|ref|YP_002503464.1| F0F1 ATP synthase subunit C [Mycobacterium leprae Br4923]
gi|1168603|sp|P45828.1|ATPL_MYCLE RecName: Full=ATP synthase subunit c; AltName: Full=ATP synthase
F(0) sector subunit c; AltName: Full=F-type ATPase subunit
c; Short=F-ATPase subunit c; AltName: Full=Lipid-binding
protein
gi|254810012|sp|B8ZR37.1|ATPL_MYCLB RecName: Full=ATP synthase subunit c; AltName: Full=ATP synthase
F(0) sector subunit c; AltName: Full=F-type ATPase subunit
c; Short=F-ATPase subunit c; AltName: Full=Lipid-binding
protein
gi|699346|gb|AAA63107.1| atpE [Mycobacterium leprae]
gi|13093121|emb|CAC31521.1| probable ATP synthase C chain [Mycobacterium leprae]
gi|83588800|gb|ABC24996.1| subunit c of ATP synthase [Mycobacterium leprae]
gi|219933155|emb|CAR71235.1| probable ATP synthase C chain [Mycobacterium leprae Br4923]
Length=81
Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/81 (93%), Positives = 78/81 (97%), Gaps = 0/81 (0%)
Query 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 60
MDP IA GALIGGGLIMAGGAIGAGIGDG+AGNAL+SG+ARQPEAQ RLFTPFFITVGLV
Sbjct 1 MDPMIAQGALIGGGLIMAGGAIGAGIGDGMAGNALVSGIARQPEAQSRLFTPFFITVGLV 60
Query 61 EAAYFINLAFMALFVFATPVK 81
EAAYFINLAFMALFVFATPVK
Sbjct 61 EAAYFINLAFMALFVFATPVK 81
>gi|87247475|gb|ABD35820.1| AtpE [Mycobacterium aurum]
Length=81
Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/81 (97%), Positives = 81/81 (100%), Gaps = 0/81 (0%)
Query 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 60
MDPTIAAGALIGGGLIMAGGAIGAGIGDG+AGNALI+G+ARQPEAQGRLFTPFFITVGLV
Sbjct 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGIAGNALIAGIARQPEAQGRLFTPFFITVGLV 60
Query 61 EAAYFINLAFMALFVFATPVK 81
EAAYFINLAFMALFVFATPVK
Sbjct 61 EAAYFINLAFMALFVFATPVK 81
>gi|145222901|ref|YP_001133579.1| F0F1 ATP synthase subunit C [Mycobacterium gilvum PYR-GCK]
gi|315443366|ref|YP_004076245.1| ATP synthase F0 subcomplex C subunit [Mycobacterium sp. Spyr1]
gi|333989944|ref|YP_004522558.1| ATP synthase C chain AtpE [Mycobacterium sp. JDM601]
gi|254810011|sp|A4T8K8.1|ATPL_MYCGI RecName: Full=ATP synthase subunit c; AltName: Full=ATP synthase
F(0) sector subunit c; AltName: Full=F-type ATPase subunit
c; Short=F-ATPase subunit c; AltName: Full=Lipid-binding
protein
gi|145215387|gb|ABP44791.1| ATP synthase F0 subcomplex C subunit [Mycobacterium gilvum PYR-GCK]
gi|315261669|gb|ADT98410.1| ATP synthase F0 subcomplex C subunit [Mycobacterium sp. Spyr1]
gi|333485912|gb|AEF35304.1| ATP synthase C chain AtpE [Mycobacterium sp. JDM601]
Length=81
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/80 (98%), Positives = 80/80 (100%), Gaps = 0/80 (0%)
Query 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 60
MDPTIAAGALIGGGLIMAGGAIGAGIGDG+AGNALISG+ARQPEAQGRLFTPFFITVGLV
Sbjct 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGIAGNALISGIARQPEAQGRLFTPFFITVGLV 60
Query 61 EAAYFINLAFMALFVFATPV 80
EAAYFINLAFMALFVFATPV
Sbjct 61 EAAYFINLAFMALFVFATPV 80
>gi|108800845|ref|YP_641042.1| F0F1 ATP synthase subunit C [Mycobacterium sp. MCS]
gi|119869985|ref|YP_939937.1| F0F1 ATP synthase subunit C [Mycobacterium sp. KMS]
gi|126436443|ref|YP_001072134.1| F0F1 ATP synthase subunit C [Mycobacterium sp. JLS]
6 more sequence titles
gi|123368898|sp|Q1B548.1|ATPL_MYCSS RecName: Full=ATP synthase subunit c; AltName: Full=ATP synthase
F(0) sector subunit c; AltName: Full=F-type ATPase subunit
c; Short=F-ATPase subunit c; AltName: Full=Lipid-binding
protein
gi|254810014|sp|A3Q3B6.1|ATPL_MYCSJ RecName: Full=ATP synthase subunit c; AltName: Full=ATP synthase
F(0) sector subunit c; AltName: Full=F-type ATPase subunit
c; Short=F-ATPase subunit c; AltName: Full=Lipid-binding
protein
gi|254810015|sp|A1UJY9.1|ATPL_MYCSK RecName: Full=ATP synthase subunit c; AltName: Full=ATP synthase
F(0) sector subunit c; AltName: Full=F-type ATPase subunit
c; Short=F-ATPase subunit c; AltName: Full=Lipid-binding
protein
gi|108771264|gb|ABG09986.1| ATP synthase F0 subcomplex C subunit [Mycobacterium sp. MCS]
gi|119696074|gb|ABL93147.1| ATP synthase F0 subcomplex C subunit [Mycobacterium sp. KMS]
gi|126236243|gb|ABN99643.1| ATP synthase F0 subcomplex C subunit [Mycobacterium sp. JLS]
Length=81
Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/80 (97%), Positives = 80/80 (100%), Gaps = 0/80 (0%)
Query 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 60
MDPTIAAGALIGGGLIMAGGAIGAGIGDG+AGNALI+G+ARQPEAQGRLFTPFFITVGLV
Sbjct 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGIAGNALIAGIARQPEAQGRLFTPFFITVGLV 60
Query 61 EAAYFINLAFMALFVFATPV 80
EAAYFINLAFMALFVFATPV
Sbjct 61 EAAYFINLAFMALFVFATPV 80
>gi|169628539|ref|YP_001702188.1| F0F1 ATP synthase subunit C [Mycobacterium abscessus ATCC 19977]
gi|83588806|gb|ABC24999.1| subunit c of ATP synthase [Mycobacterium abscessus]
gi|169240506|emb|CAM61534.1| ATP synthase C chain AtpE [Mycobacterium abscessus]
Length=83
Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/78 (98%), Positives = 77/78 (99%), Gaps = 0/78 (0%)
Query 2 DPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLVE 61
DPTI AGALIGGGLIMAGGAIGAGIGDG+AGNALISGVARQPEAQGRLFTPFFITVGLVE
Sbjct 3 DPTIVAGALIGGGLIMAGGAIGAGIGDGIAGNALISGVARQPEAQGRLFTPFFITVGLVE 62
Query 62 AAYFINLAFMALFVFATP 79
AAYFINLAFMALFVFATP
Sbjct 63 AAYFINLAFMALFVFATP 80
>gi|83588796|gb|ABC24994.1| subunit c of ATP synthase [Mycobacterium chelonae]
Length=83
Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/78 (97%), Positives = 76/78 (98%), Gaps = 0/78 (0%)
Query 2 DPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLVE 61
DPTI AGALIGGGLIMAGGAIGAGIGDG+AGNALISGVARQPEAQ RLFTPFFITVGLVE
Sbjct 3 DPTIVAGALIGGGLIMAGGAIGAGIGDGIAGNALISGVARQPEAQSRLFTPFFITVGLVE 62
Query 62 AAYFINLAFMALFVFATP 79
AAYFINLAFMALFVFATP
Sbjct 63 AAYFINLAFMALFVFATP 80
>gi|296139995|ref|YP_003647238.1| ATP synthase F0 subunit chi [Tsukamurella paurometabola DSM 20162]
gi|296028129|gb|ADG78899.1| ATP synthase F0, C subunit [Tsukamurella paurometabola DSM 20162]
Length=89
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/80 (67%), Positives = 61/80 (77%), Gaps = 0/80 (0%)
Query 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 60
++ I AGAL GG+I+ G A+G GIG+GVAG L+ GVARQP A RL PFFITV LV
Sbjct 7 VNAIITAGALGAGGMILGGAAVGTGIGNGVAGARLVEGVARQPSAANRLLQPFFITVSLV 66
Query 61 EAAYFINLAFMALFVFATPV 80
EA YFINLAFMA+ VFATPV
Sbjct 67 EAVYFINLAFMAMIVFATPV 86
>gi|83588794|gb|ABC24993.1| subunit c of ATP synthase [Mycobacterium xenopi]
Length=84
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/52 (97%), Positives = 51/52 (99%), Gaps = 0/52 (0%)
Query 30 VAGNALISGVARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVFATPVK 81
VAGNALISG+ARQPEAQGRLFTPFFITVGLVEA YFINLAFMALFVFATPVK
Sbjct 33 VAGNALISGIARQPEAQGRLFTPFFITVGLVEAMYFINLAFMALFVFATPVK 84
>gi|41408554|ref|NP_961390.1| F0F1 ATP synthase subunit C [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118467104|ref|YP_880761.1| F0F1 ATP synthase subunit C [Mycobacterium avium 104]
gi|296170246|ref|ZP_06851839.1| ATP synthase F0 sector subunit C [Mycobacterium parascrofulaceum
ATCC BAA-614]
6 more sequence titles
Length=84
Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/80 (90%), Positives = 77/80 (97%), Gaps = 0/80 (0%)
Query 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 60
+DP +AA ALIGGGLIM GGAIGAGIGDG+AGNAL+SG+ARQPEAQGRLFTPFFITVGLV
Sbjct 3 LDPQVAAAALIGGGLIMGGGAIGAGIGDGIAGNALVSGIARQPEAQGRLFTPFFITVGLV 62
Query 61 EAAYFINLAFMALFVFATPV 80
EAAYFINLAFMALFVFATPV
Sbjct 63 EAAYFINLAFMALFVFATPV 82
>gi|296138977|ref|YP_003646220.1| ATP synthase F0 subunit chi [Tsukamurella paurometabola DSM 20162]
gi|296027111|gb|ADG77881.1| ATP synthase F0, C subunit [Tsukamurella paurometabola DSM 20162]
Length=81
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/81 (84%), Positives = 75/81 (93%), Gaps = 0/81 (0%)
Query 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 60
MDP IA GALIGGGLIM GGAIGAGIG+G+AG+ L++G+ARQPEAQGRL TPFFITVGLV
Sbjct 1 MDPNIAQGALIGGGLIMGGGAIGAGIGNGLAGSQLVAGIARQPEAQGRLMTPFFITVGLV 60
Query 61 EAAYFINLAFMALFVFATPVK 81
EAAYFINLAFMALFVFATP+
Sbjct 61 EAAYFINLAFMALFVFATPIS 81
>gi|254774344|ref|ZP_05215860.1| F0F1 ATP synthase subunit C [Mycobacterium avium subsp. avium
ATCC 25291]
gi|254821304|ref|ZP_05226305.1| F0F1 ATP synthase subunit C [Mycobacterium intracellulare ATCC
13950]
gi|342858034|ref|ZP_08714690.1| F0F1 ATP synthase subunit C [Mycobacterium colombiense CECT 3035]
gi|342135367|gb|EGT88533.1| F0F1 ATP synthase subunit C [Mycobacterium colombiense CECT 3035]
Length=66
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/48 (96%), Positives = 48/48 (100%), Gaps = 0/48 (0%)
Query 33 NALISGVARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVFATPV 80
NAL+SG+ARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVFATPV
Sbjct 17 NALVSGIARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVFATPV 64
>gi|87247483|gb|ABD35824.1| AtpE [Mycobacterium fortuitum]
Length=86
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/81 (91%), Positives = 76/81 (94%), Gaps = 2/81 (2%)
Query 1 MDPT--IAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVG 58
+DP I AGALIGGGLIM GGAIGAGIGDG+AGNALISG+ARQPEAQGRLFTPFFITVG
Sbjct 3 LDPNALITAGALIGGGLIMGGGAIGAGIGDGIAGNALISGIARQPEAQGRLFTPFFITVG 62
Query 59 LVEAAYFINLAFMALFVFATP 79
LVEAAYFINLAFMALFVFATP
Sbjct 63 LVEAAYFINLAFMALFVFATP 83
>gi|87247481|gb|ABD35823.1| AtpE [Mycobacterium peregrinum]
Length=86
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/81 (91%), Positives = 76/81 (94%), Gaps = 2/81 (2%)
Query 1 MDPT--IAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVG 58
+DP I AGALIGGGLIM GGAIGAGIGDG+AGNALISG+ARQPEAQGRLFTPFFITVG
Sbjct 3 LDPNALITAGALIGGGLIMGGGAIGAGIGDGIAGNALISGIARQPEAQGRLFTPFFITVG 62
Query 59 LVEAAYFINLAFMALFVFATP 79
LVEAAYFINLAFMALFVFATP
Sbjct 63 LVEAAYFINLAFMALFVFATP 83
>gi|56266614|emb|CAI26298.1| ATP synthase c chain [Mycobacterium smegmatis]
gi|56266616|emb|CAI26299.1| ATP synthase c chain [Mycobacterium smegmatis]
Length=86
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/81 (89%), Positives = 75/81 (93%), Gaps = 2/81 (2%)
Query 1 MDPT--IAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVG 58
+DP I AGALIGGGLIM GGAIGAGIG G+AGNALISG+ARQPEAQGRLFTPFFITVG
Sbjct 3 LDPNAIITAGALIGGGLIMGGGAIGAGIGVGIAGNALISGIARQPEAQGRLFTPFFITVG 62
Query 59 LVEAAYFINLAFMALFVFATP 79
LVEAAYFINLAFMALFVFATP
Sbjct 63 LVEAAYFINLAFMALFVFATP 83
>gi|118467835|ref|YP_889193.1| F0F1 ATP synthase subunit C [Mycobacterium smegmatis str. MC2
155]
gi|55859452|emb|CAH89265.1| hypothetical protein [Mycobacterium smegmatis]
gi|83588792|gb|ABC24992.1| subunit c of ATP synthase [Mycobacterium smegmatis]
gi|118169122|gb|ABK70018.1| ATP synthase F0, C subunit [Mycobacterium smegmatis str. MC2
155]
Length=86
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/81 (91%), Positives = 76/81 (94%), Gaps = 2/81 (2%)
Query 1 MDPT--IAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVG 58
+DP I AGALIGGGLIM GGAIGAGIGDG+AGNALISG+ARQPEAQGRLFTPFFITVG
Sbjct 3 LDPNAIITAGALIGGGLIMGGGAIGAGIGDGIAGNALISGIARQPEAQGRLFTPFFITVG 62
Query 59 LVEAAYFINLAFMALFVFATP 79
LVEAAYFINLAFMALFVFATP
Sbjct 63 LVEAAYFINLAFMALFVFATP 83
>gi|343928066|ref|ZP_08767531.1| ATP synthase subunit c [Gordonia alkanivorans NBRC 16433]
gi|343762074|dbj|GAA14457.1| ATP synthase subunit c [Gordonia alkanivorans NBRC 16433]
Length=83
Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/81 (86%), Positives = 76/81 (94%), Gaps = 0/81 (0%)
Query 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 60
MDP I GALIGGGLIMAGGA+GAGIG+G+AG+ LI+G+ARQPEAQGRLFTPFFITVGLV
Sbjct 1 MDPYIGLGALIGGGLIMAGGAVGAGIGNGLAGSQLIAGIARQPEAQGRLFTPFFITVGLV 60
Query 61 EAAYFINLAFMALFVFATPVK 81
EAAYFINLAFMALFVFATP+
Sbjct 61 EAAYFINLAFMALFVFATPIS 81
>gi|120405287|ref|YP_955116.1| F0F1 ATP synthase subunit C [Mycobacterium vanbaalenii PYR-1]
gi|119958105|gb|ABM15110.1| ATP synthase F0 subcomplex C subunit [Mycobacterium vanbaalenii
PYR-1]
Length=86
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/81 (89%), Positives = 76/81 (94%), Gaps = 2/81 (2%)
Query 1 MDPT--IAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVG 58
+DP I AGALIGGGLIM GGAIGAGIGDG+AGNALI+G+ARQPEAQGRLFTPFFITVG
Sbjct 3 IDPNAIITAGALIGGGLIMGGGAIGAGIGDGIAGNALIAGIARQPEAQGRLFTPFFITVG 62
Query 59 LVEAAYFINLAFMALFVFATP 79
LVEAAYFINLAFMALFVFATP
Sbjct 63 LVEAAYFINLAFMALFVFATP 83
>gi|262201855|ref|YP_003273063.1| ATP synthase F0 subunit C [Gordonia bronchialis DSM 43247]
gi|262085202|gb|ACY21170.1| ATP synthase F0, C subunit [Gordonia bronchialis DSM 43247]
Length=88
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/52 (87%), Positives = 49/52 (95%), Gaps = 0/52 (0%)
Query 30 VAGNALISGVARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVFATPVK 81
+AG LI+G+ARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVFATP+
Sbjct 31 LAGAQLIAGIARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVFATPIS 82
>gi|117927856|ref|YP_872407.1| F0F1 ATP synthase subunit C [Acidothermus cellulolyticus 11B]
gi|117648319|gb|ABK52421.1| ATP synthase F0 subcomplex C subunit [Acidothermus cellulolyticus
11B]
Length=87
Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/49 (78%), Positives = 42/49 (86%), Gaps = 0/49 (0%)
Query 28 DGVAGNALISGVARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVF 76
DG+AG I+GVARQPE+QGRL FF+TVGLVEA YFINLAFMALFVF
Sbjct 35 DGLAGAQTIAGVARQPESQGRLMPLFFLTVGLVEAMYFINLAFMALFVF 83
>gi|296393123|ref|YP_003658007.1| ATP synthase F0 subunit C [Segniliparus rotundus DSM 44985]
gi|296180270|gb|ADG97176.1| ATP synthase F0, C subunit [Segniliparus rotundus DSM 44985]
Length=91
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/52 (85%), Positives = 46/52 (89%), Gaps = 0/52 (0%)
Query 28 DGVAGNALISGVARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVFATP 79
DG+AG LI+GVARQPEAQGRLFTPFFITVGL EA YFINLAFMA F FATP
Sbjct 34 DGLAGGQLIAGVARQPEAQGRLFTPFFITVGLCEAMYFINLAFMAFFAFATP 85
>gi|317506173|ref|ZP_07963994.1| ATP synthase subunit C protein [Segniliparus rugosus ATCC BAA-974]
gi|316255518|gb|EFV14767.1| ATP synthase subunit C protein [Segniliparus rugosus ATCC BAA-974]
Length=91
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/52 (85%), Positives = 46/52 (89%), Gaps = 0/52 (0%)
Query 28 DGVAGNALISGVARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVFATP 79
DG+AG LI+GVARQPEAQGRLFTPFFITVGL EA YFINLAFMA F FATP
Sbjct 34 DGLAGGQLIAGVARQPEAQGRLFTPFFITVGLCEAMYFINLAFMAFFAFATP 85
>gi|255658911|ref|ZP_05404320.1| ATP synthase F0, C subunit [Mitsuokella multacida DSM 20544]
gi|260848861|gb|EEX68868.1| ATP synthase F0, C subunit [Mitsuokella multacida DSM 20544]
Length=83
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/79 (44%), Positives = 49/79 (63%), Gaps = 0/79 (0%)
Query 2 DPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLVE 61
+ + A AL+G GL M AIGAG+GDG+ + I G+ RQPEAQ +LFT I+VGL+E
Sbjct 3 NAIMVAAALVGAGLCMGLAAIGAGLGDGLVTSRFIEGITRQPEAQSKLFTNTLISVGLIE 62
Query 62 AAYFINLAFMALFVFATPV 80
+ I + ++A P+
Sbjct 63 SMAIIATVVALIMLYANPL 81
>gi|313896946|ref|ZP_07830493.1| ATP synthase F0, C subunit [Selenomonas sp. oral taxon 137 str.
F0430]
gi|320529509|ref|ZP_08030594.1| ATP synthase F0, C subunit [Selenomonas artemidis F0399]
gi|312974393|gb|EFR39861.1| ATP synthase F0, C subunit [Selenomonas sp. oral taxon 137 str.
F0430]
gi|320138220|gb|EFW30117.1| ATP synthase F0, C subunit [Selenomonas artemidis F0399]
Length=83
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/79 (46%), Positives = 49/79 (63%), Gaps = 0/79 (0%)
Query 2 DPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLVE 61
+ + A ALIG G+ M AIGAGIGDG+ + I G+ RQPEA+G LFT I+VGL+E
Sbjct 3 NAIMVAAALIGAGITMGLAAIGAGIGDGLVTSKFIEGITRQPEAKGVLFTNTLISVGLIE 62
Query 62 AAYFINLAFMALFVFATPV 80
A I + ++A P+
Sbjct 63 AMAIIATVVALIMLYANPL 81
>gi|331695528|ref|YP_004331767.1| ATP synthase subunit c [Pseudonocardia dioxanivorans CB1190]
gi|326950217|gb|AEA23914.1| ATP synthase subunit c [Pseudonocardia dioxanivorans CB1190]
Length=91
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/47 (71%), Positives = 38/47 (81%), Gaps = 0/47 (0%)
Query 30 VAGNALISGVARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVF 76
+AG ++I GVARQPEA GRL T F+ +GLVE YFINLAFMALFVF
Sbjct 42 LAGASVIQGVARQPEAAGRLNTTMFLIIGLVEGMYFINLAFMALFVF 88
>gi|334127137|ref|ZP_08501066.1| ATP synthase F0 sector subunit C [Centipeda periodontii DSM 2778]
gi|333389913|gb|EGK61068.1| ATP synthase F0 sector subunit C [Centipeda periodontii DSM 2778]
Length=83
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/79 (50%), Positives = 50/79 (64%), Gaps = 0/79 (0%)
Query 2 DPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLVE 61
+ + AGALIG GL AIGAGIGDG+ I G+ARQPEA G LFT I+VGL+E
Sbjct 3 NAIMVAGALIGAGLCFGLAAIGAGIGDGLVTGRFIEGLARQPEAGGVLFTRTLISVGLIE 62
Query 62 AAYFINLAFMALFVFATPV 80
A I + F + ++A P+
Sbjct 63 ALAIIGVVFGIIMLYANPL 81
>gi|238927820|ref|ZP_04659580.1| H(+)-transporting two-sector ATPase [Selenomonas flueggei ATCC
43531]
gi|304437796|ref|ZP_07397746.1| ATP synthase F0 sector subunit C [Selenomonas sp. oral taxon
149 str. 67H29BP]
gi|238884367|gb|EEQ48005.1| H(+)-transporting two-sector ATPase [Selenomonas flueggei ATCC
43531]
gi|304369244|gb|EFM22919.1| ATP synthase F0 sector subunit C [Selenomonas sp. oral taxon
149 str. 67H29BP]
Length=83
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/79 (50%), Positives = 50/79 (64%), Gaps = 0/79 (0%)
Query 2 DPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLVE 61
+ + AGALIG GL AIGAGIGDG+ I G+ARQPEA G LFT I+VGL+E
Sbjct 3 NAIMVAGALIGAGLCFGLAAIGAGIGDGLVTGRFIEGLARQPEAGGVLFTRTLISVGLIE 62
Query 62 AAYFINLAFMALFVFATPV 80
A I + F + ++A P+
Sbjct 63 ALAIIGVVFGIIMLYANPL 81
>gi|260886474|ref|ZP_05897737.1| ATP synthase F0, C subunit [Selenomonas sputigena ATCC 35185]
gi|330839678|ref|YP_004414258.1| ATP synthase F0, C subunit [Selenomonas sputigena ATCC 35185]
gi|260863617|gb|EEX78117.1| ATP synthase F0, C subunit [Selenomonas sputigena ATCC 35185]
gi|329747442|gb|AEC00799.1| ATP synthase F0, C subunit [Selenomonas sputigena ATCC 35185]
Length=84
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/79 (45%), Positives = 47/79 (60%), Gaps = 0/79 (0%)
Query 2 DPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLVE 61
+ + A ALIG G+ M AIGAGIGDG+ I G+ RQPEA+ LFT I+VGL+E
Sbjct 3 NAIMVAAALIGAGITMGLAAIGAGIGDGLVTARFIEGITRQPEAKNALFTNTLISVGLIE 62
Query 62 AAYFINLAFMALFVFATPV 80
A I + ++A P+
Sbjct 63 AMAIIATVVALIMLYANPL 81
>gi|292670136|ref|ZP_06603562.1| H(+)-transporting two-sector ATPase [Selenomonas noxia ATCC 43541]
gi|292648235|gb|EFF66207.1| H(+)-transporting two-sector ATPase [Selenomonas noxia ATCC 43541]
Length=83
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/79 (45%), Positives = 49/79 (63%), Gaps = 0/79 (0%)
Query 2 DPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLVE 61
+ + A ALIG G+ A+GA IGDG+ + I G+ARQPEA+G LFT I+VGL+E
Sbjct 3 NAIMVAAALIGAGITAGLAAVGAAIGDGLVTSRFIEGLARQPEARGTLFTNTLISVGLIE 62
Query 62 AAYFINLAFMALFVFATPV 80
A I + L ++A P+
Sbjct 63 ALAIIAVVVALLMLYANPL 81
>gi|291534222|emb|CBL07335.1| ATP synthase F0 subcomplex C subunit [Megamonas hypermegale ART12/1]
Length=83
Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/72 (46%), Positives = 45/72 (63%), Gaps = 0/72 (0%)
Query 9 ALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLVEAAYFINL 68
ALIG G+ M +IGAGIGDG+ + I G+ARQPEA+ LF I+VGL+EA I
Sbjct 10 ALIGAGITMGLASIGAGIGDGLVTSKFIEGIARQPEAKNTLFMNTLISVGLIEAMPIIAT 69
Query 69 AFMALFVFATPV 80
+ ++A P+
Sbjct 70 VIALIMLYANPL 81
>gi|342214239|ref|ZP_08706940.1| ATP synthase F0, C subunit [Veillonella sp. oral taxon 780 str.
F0422]
gi|341594470|gb|EGS37159.1| ATP synthase F0, C subunit [Veillonella sp. oral taxon 780 str.
F0422]
Length=90
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/73 (47%), Positives = 44/73 (61%), Gaps = 0/73 (0%)
Query 8 GALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLVEAAYFIN 67
G+ IG GL + AIGAGIGDG+ + G+ RQPE G+LFT I+VGL+EA I
Sbjct 13 GSAIGAGLAIGLAAIGAGIGDGLVSGKALEGMTRQPEQSGKLFTNMLISVGLIEAVPIIA 72
Query 68 LAFMALFVFATPV 80
+ VFA P+
Sbjct 73 AVIAIVLVFANPL 85
>gi|323140889|ref|ZP_08075802.1| ATP synthase F0, C subunit [Phascolarctobacterium sp. YIT 12067]
gi|322414627|gb|EFY05433.1| ATP synthase F0, C subunit [Phascolarctobacterium sp. YIT 12067]
Length=87
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (39%), Positives = 44/78 (57%), Gaps = 0/78 (0%)
Query 2 DPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLVE 61
+ I A ++IG GL+ G A+GAG G+G I +ARQPE G++FT + VGL+E
Sbjct 7 NAIITAASVIGAGLVCLGAAMGAGFGNGNMCGKSIESMARQPEESGKIFTNMLVCVGLIE 66
Query 62 AAYFINLAFMALFVFATP 79
+ + + VFA P
Sbjct 67 SMPILCYVIAIVLVFANP 84
>gi|261856904|ref|YP_003264187.1| ATP synthase F0 C subunit [Halothiobacillus neapolitanus c2]
gi|261837373|gb|ACX97140.1| ATP synthase F0, C subunit [Halothiobacillus neapolitanus c2]
Length=95
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/79 (44%), Positives = 48/79 (61%), Gaps = 0/79 (0%)
Query 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 60
M TI A +G G+I+A +G+ IG G+ + + G+ARQPE + +L T FI GL+
Sbjct 5 MLATIYAYTAVGVGVILAAAGLGSAIGWGLICSKTLEGIARQPEMRPQLMTNMFIFAGLM 64
Query 61 EAAYFINLAFMALFVFATP 79
E+ FI LAF F+FA P
Sbjct 65 ESFPFIILAFAMWFLFANP 83
>gi|11467019|ref|NP_041926.1| ATP synthase CF0 C subunit [Euglena gracilis]
gi|231611|sp|P10603.2|ATPH_EUGGR RecName: Full=ATP synthase subunit c, chloroplastic; AltName:
Full=ATP synthase F(0) sector subunit c; AltName: Full=ATPase
subunit III; AltName: Full=F-type ATPase subunit c; Short=F-ATPase
subunit c; AltName: Full=Lipid-binding protein
gi|14380|emb|CAA77930.1| ATP synthase CFo subunit III [Euglena gracilis]
gi|415769|emb|CAA50113.1| ATP synthase, CF0-subunit III [Euglena gracilis]
Length=81
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/79 (41%), Positives = 45/79 (57%), Gaps = 0/79 (0%)
Query 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 60
M+P I A ++IG GL + GAIG GIG G A I G+ARQPEA+G++ +++ +
Sbjct 1 MNPIICAASVIGAGLAIGLGAIGPGIGQGTASGKAIEGLARQPEAEGKIRGTLLLSLAFM 60
Query 61 EAAYFINLAFMALFVFATP 79
EA L +FA P
Sbjct 61 EALTIYGLVVALAIIFANP 79
>gi|113170456|ref|YP_717248.1| AtpH [Ostreococcus tauri]
gi|112806863|emb|CAL36370.1| AtpH [Ostreococcus tauri]
Length=101
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/79 (38%), Positives = 45/79 (57%), Gaps = 0/79 (0%)
Query 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 60
M+P I A +++G GL + GAIG GIG G A + G+ARQPEA+G++ +++ +
Sbjct 20 MNPLICAASVVGAGLAIGLGAIGPGIGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 79
Query 61 EAAYFINLAFMALFVFATP 79
EA L +FA P
Sbjct 80 EALTIYGLVVALALMFANP 98
>gi|224178031|ref|YP_002600943.1| CF0 subunit III of ATP synthase [Pyramimonas parkeae]
gi|215882698|gb|ACJ71071.1| CF0 subunit III of ATP synthase [Pyramimonas parkeae]
Length=82
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/79 (40%), Positives = 45/79 (57%), Gaps = 0/79 (0%)
Query 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 60
M+P I A ++IG GL + GAIG GIG G A + G+ARQPEA+G++ +++ +
Sbjct 1 MNPLICAASVIGAGLAIGLGAIGPGIGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60
Query 61 EAAYFINLAFMALFVFATP 79
EA L +FA P
Sbjct 61 EALTIYGLVVALAIIFANP 79
>gi|226968662|ref|YP_002808622.1| ATP synthase CF0 subunit C [Micromonas sp. RCC299]
gi|223635056|sp|Q0P3K7.2|ATPH_OSTTA RecName: Full=ATP synthase subunit c, chloroplastic; AltName:
Full=ATP synthase F(0) sector subunit c; AltName: Full=ATPase
subunit III; AltName: Full=F-type ATPase subunit c; Short=F-ATPase
subunit c; AltName: Full=Lipid-binding protein
gi|226431140|gb|ACO55546.1| ATP synthase CF0 subunit C [Micromonas sp. RCC299]
Length=82
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/79 (38%), Positives = 45/79 (57%), Gaps = 0/79 (0%)
Query 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 60
M+P I A +++G GL + GAIG GIG G A + G+ARQPEA+G++ +++ +
Sbjct 1 MNPLICAASVVGAGLAIGLGAIGPGIGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60
Query 61 EAAYFINLAFMALFVFATP 79
EA L +FA P
Sbjct 61 EALTIYGLVVALALMFANP 79
>gi|290969218|ref|ZP_06560743.1| ATP synthase F0, C subunit [Megasphaera genomosp. type_1 str.
28L]
gi|335049573|ref|ZP_08542563.1| ATP synthase F0, C subunit [Megasphaera sp. UPII 199-6]
gi|290780724|gb|EFD93327.1| ATP synthase F0, C subunit [Megasphaera genomosp. type_1 str.
28L]
gi|333762833|gb|EGL40318.1| ATP synthase F0, C subunit [Megasphaera sp. UPII 199-6]
Length=85
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/74 (48%), Positives = 43/74 (59%), Gaps = 4/74 (5%)
Query 6 AAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLVEAAYF 65
A GA IG GL A+GA IGDG A ++ G ARQPE G+LF I+VGL+EA
Sbjct 11 AMGAAIGMGL----AALGAAIGDGNAAAKMLEGTARQPEMAGKLFVNMLISVGLIEALPI 66
Query 66 INLAFMALFVFATP 79
I + + VFA P
Sbjct 67 IAVVIGIILVFANP 80
>gi|224179487|ref|YP_002601012.1| CF0 subunit III of ATP synthase [Monomastix sp. OKE-1]
gi|217314530|gb|ACK36873.1| CF0 subunit III of ATP synthase [Monomastix sp. OKE-1]
Length=82
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/79 (38%), Positives = 45/79 (57%), Gaps = 0/79 (0%)
Query 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 60
M+P I A +++G GL + GAIG GIG G A + G+ARQPEA+G++ +++ +
Sbjct 1 MNPLIGAASVVGAGLAIGLGAIGPGIGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60
Query 61 EAAYFINLAFMALFVFATP 79
EA L +FA P
Sbjct 61 EALTIYGLVVALALLFANP 79
>gi|334144692|ref|YP_004537848.1| ATP synthase subunit c [Thioalkalimicrobium cyclicum ALM1]
gi|333965603|gb|AEG32369.1| ATP synthase subunit c [Thioalkalimicrobium cyclicum ALM1]
Length=96
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/79 (44%), Positives = 46/79 (59%), Gaps = 0/79 (0%)
Query 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 60
M I A IG G+I+A +G+ IG G+ + + G+ARQPE + L T FI GL+
Sbjct 7 MIADIYAATAIGVGVILAAAGLGSAIGWGLICSKTLEGIARQPEMRPALMTNMFIFAGLM 66
Query 61 EAAYFINLAFMALFVFATP 79
E+ FI LAF F+FA P
Sbjct 67 ESFPFIILAFAMWFLFANP 85
>gi|88811298|ref|ZP_01126554.1| ATP synthase F0, C subunit [Nitrococcus mobilis Nb-231]
gi|88791837|gb|EAR22948.1| ATP synthase F0, C subunit [Nitrococcus mobilis Nb-231]
Length=99
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/69 (44%), Positives = 42/69 (61%), Gaps = 0/69 (0%)
Query 11 IGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLVEAAYFINLAF 70
+G G+I+ +G+ +G G+ + + G+ARQPE Q RL FIT GL+E+ FI LAF
Sbjct 17 LGVGIILGLAGLGSALGWGLICSKYMEGIARQPEMQPRLLIQMFITAGLMESFPFIVLAF 76
Query 71 MALFVFATP 79
F FA P
Sbjct 77 AMYFTFANP 85
>gi|78486507|ref|YP_392432.1| ATP synthase F0, C subunit [Thiomicrospira crunogena XCL-2]
gi|123769021|sp|Q31DL5.1|ATPL_THICR RecName: Full=ATP synthase subunit c; AltName: Full=ATP synthase
F(0) sector subunit c; AltName: Full=F-type ATPase subunit
c; Short=F-ATPase subunit c; AltName: Full=Lipid-binding
protein
gi|78364793|gb|ABB42758.1| ATP synthase F0, C subunit [Thiomicrospira crunogena XCL-2]
Length=94
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 0/75 (0%)
Query 5 IAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLVEAAY 64
I A IG G+I+A +G+ IG G+ + + G+ARQPE + L T FI GL+E+
Sbjct 9 IYAATAIGVGVILAAAGLGSAIGWGLICSKTLEGIARQPEMRPALMTNMFIFAGLMESFP 68
Query 65 FINLAFMALFVFATP 79
FI LAF F+FA P
Sbjct 69 FIILAFAMWFLFANP 83
>gi|114777378|ref|ZP_01452375.1| ATP synthase F0, C subunit [Mariprofundus ferrooxydans PV-1]
gi|114552160|gb|EAU54662.1| ATP synthase F0, C subunit [Mariprofundus ferrooxydans PV-1]
Length=84
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (41%), Positives = 48/81 (60%), Gaps = 2/81 (2%)
Query 1 MDPT--IAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVG 58
MDP I A + I G+I+A +G+ IG G+ + + G+ARQPE + +L FI G
Sbjct 1 MDPHTIIIAASAISVGVILAAAGLGSAIGWGLICSKTLEGIARQPEMRPQLMFNMFIFAG 60
Query 59 LVEAAYFINLAFMALFVFATP 79
L+E+ FI +AF F+FA P
Sbjct 61 LMESFPFIIMAFALWFLFANP 81
>gi|118411027|ref|YP_874422.1| ATP synthase CF0 C chain subunit III [Phaeodactylum tricornutum]
gi|223634991|sp|A0T0E7.1|ATPH_PHATC RecName: Full=ATP synthase subunit c, chloroplastic; AltName:
Full=ATP synthase F(0) sector subunit c; AltName: Full=ATPase
subunit III; AltName: Full=F-type ATPase subunit c; Short=F-ATPase
subunit c; AltName: Full=Lipid-binding protein
gi|116739774|gb|ABK20645.1| ATP synthase CF0 C chain subunit III [Phaeodactylum tricornutum]
Length=82
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/79 (38%), Positives = 44/79 (56%), Gaps = 0/79 (0%)
Query 1 MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLV 60
MDP I+A ++IG GL + AIG GIG G A + G+ARQPEA+ ++ +++ +
Sbjct 1 MDPIISAASVIGAGLSIGLAAIGPGIGQGTAAGQAVEGIARQPEAENKIRGVLLLSLAFM 60
Query 61 EAAYFINLAFMALFVFATP 79
EA L +FA P
Sbjct 61 EALTIYGLVVALALLFANP 79
>gi|298370412|ref|ZP_06981728.1| ATP synthase F0, C subunit [Neisseria sp. oral taxon 014 str.
F0314]
gi|298281872|gb|EFI23361.1| ATP synthase F0, C subunit [Neisseria sp. oral taxon 014 str.
F0314]
Length=78
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/69 (47%), Positives = 42/69 (61%), Gaps = 0/69 (0%)
Query 11 IGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLVEAAYFINLAF 70
I GLI+A GA+GA IG G+ G+ + ARQPE G L T F+ GL++AA+ I +A
Sbjct 7 IACGLIVAFGAMGAAIGIGMVGSKYLESSARQPELIGPLQTKLFLIAGLIDAAFLIGVAI 66
Query 71 MALFVFATP 79
LF F P
Sbjct 67 ALLFAFVNP 75
>gi|294668633|ref|ZP_06733729.1| ATP synthase F0, C subunit [Neisseria elongata subsp. glycolytica
ATCC 29315]
gi|291309395|gb|EFE50638.1| ATP synthase F0, C subunit [Neisseria elongata subsp. glycolytica
ATCC 29315]
Length=77
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/69 (45%), Positives = 41/69 (60%), Gaps = 0/69 (0%)
Query 11 IGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLVEAAYFINLAF 70
I GLI+A GA+GA IG + G+ + ARQPE G L T F+ GL++AA+ I +A
Sbjct 6 IACGLIVALGALGASIGIAMVGSKYLESSARQPELIGPLQTKLFLIAGLIDAAFLIGVAI 65
Query 71 MALFVFATP 79
LF F P
Sbjct 66 ALLFAFVNP 74
>gi|294789018|ref|ZP_06754258.1| ATP synthase F0, C subunit [Simonsiella muelleri ATCC 29453]
gi|329118575|ref|ZP_08247279.1| ATP synthase F0 sector subunit C [Neisseria bacilliformis ATCC
BAA-1200]
gi|294483120|gb|EFG30807.1| ATP synthase F0, C subunit [Simonsiella muelleri ATCC 29453]
gi|327465310|gb|EGF11591.1| ATP synthase F0 sector subunit C [Neisseria bacilliformis ATCC
BAA-1200]
Length=77
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/71 (44%), Positives = 42/71 (60%), Gaps = 0/71 (0%)
Query 11 IGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLVEAAYFINLAF 70
I GLI+A GA+GA IG + G+ + ARQPE G L T F+ GL++AA+ I +A
Sbjct 6 IACGLIVALGALGASIGIAMVGSKYLESSARQPELIGPLQTKLFLIAGLIDAAFLIGVAI 65
Query 71 MALFVFATPVK 81
LF F P +
Sbjct 66 ALLFAFVNPFQ 76
Lambda K H
0.327 0.145 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128409240708
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40