BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1306
Length=171
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608446|ref|NP_215822.1| F0F1 ATP synthase subunit B [Mycoba... 338 2e-91
gi|341601253|emb|CCC63926.1| probable ATP synthase B chain atpF ... 336 6e-91
gi|289749863|ref|ZP_06509241.1| ATP synthase subunit B atpF [Myc... 335 1e-90
gi|323720263|gb|EGB29362.1| ATP synthase subunit B atpF [Mycobac... 330 6e-89
gi|183984062|ref|YP_001852353.1| ATP synthase B chain AtpF [Myco... 276 8e-73
gi|118619162|ref|YP_907494.1| F0F1 ATP synthase subunit B [Mycob... 271 3e-71
gi|240169508|ref|ZP_04748167.1| F0F1 ATP synthase subunit B [Myc... 267 4e-70
gi|342858033|ref|ZP_08714689.1| F0F1 ATP synthase subunit B [Myc... 258 1e-67
gi|296170247|ref|ZP_06851840.1| ATP synthase F0 sector subunit B... 254 2e-66
gi|41408553|ref|NP_961389.1| F0F1 ATP synthase subunit B [Mycoba... 241 3e-62
gi|118466607|ref|YP_880762.1| F0F1 ATP synthase subunit B [Mycob... 241 3e-62
gi|254821305|ref|ZP_05226306.1| F0F1 ATP synthase subunit B [Myc... 238 2e-61
gi|15827572|ref|NP_301835.1| F0F1 ATP synthase subunit B [Mycoba... 235 2e-60
gi|333989945|ref|YP_004522559.1| ATP synthase B chain AtpF [Myco... 212 1e-53
gi|118471133|ref|YP_889192.1| F0F1 ATP synthase subunit B [Mycob... 202 1e-50
gi|120405286|ref|YP_955115.1| F0F1 ATP synthase subunit B [Mycob... 187 3e-46
gi|145222902|ref|YP_001133580.1| F0F1 ATP synthase subunit B [My... 186 2e-45
gi|108800844|ref|YP_641041.1| F0F1 ATP synthase subunit B [Mycob... 182 1e-44
gi|169628540|ref|YP_001702189.1| F0F1 ATP synthase subunit B [My... 156 1e-36
gi|262201856|ref|YP_003273064.1| H+transporting two-sector ATPas... 128 3e-28
gi|317506174|ref|ZP_07963995.1| ATP synthase B/B' CF(0) [Segnili... 116 9e-25
gi|331695529|ref|YP_004331768.1| ATP synthase subunit b [Pseudon... 110 8e-23
gi|296393124|ref|YP_003658008.1| ATP synthase F0 subunit B [Segn... 107 8e-22
gi|296138978|ref|YP_003646221.1| H+transporting two-sector ATPas... 101 4e-20
gi|343928067|ref|ZP_08767532.1| ATP synthase subunit b [Gordonia... 90.9 5e-17
gi|116671155|ref|YP_832088.1| ATP synthase F0 subunit B [Arthrob... 89.4 2e-16
gi|68536424|ref|YP_251129.1| F0F1 ATP synthase subunit B [Coryne... 87.0 1e-15
gi|257069068|ref|YP_003155323.1| ATP synthase F0 subcomplex B su... 85.9 2e-15
gi|220913087|ref|YP_002488396.1| ATP synthase F0 subunit beta [A... 85.5 3e-15
gi|340794790|ref|YP_004760253.1| ATP synthase subunit B [Coryneb... 82.4 2e-14
gi|269957236|ref|YP_003327025.1| ATP synthase F0 subunit B [Xyla... 82.0 3e-14
gi|325963830|ref|YP_004241736.1| ATP synthase F0 subcomplex subu... 80.9 6e-14
gi|183602784|ref|ZP_02964147.1| F0F1 ATP synthase subunit B [Bif... 79.0 3e-13
gi|119026449|ref|YP_910294.1| F0F1 ATP synthase subunit B [Bifid... 78.6 3e-13
gi|154488036|ref|ZP_02029153.1| hypothetical protein BIFADO_0160... 78.6 3e-13
gi|336325971|ref|YP_004605937.1| F0F1 ATP synthase subunit B [Co... 78.2 4e-13
gi|119963814|ref|YP_948318.1| ATP synthase F0, B subunit [Arthro... 77.8 5e-13
gi|284992520|ref|YP_003411074.1| ATP synthase F0 subunit B [Geod... 77.4 8e-13
gi|225352597|ref|ZP_03743620.1| hypothetical protein BIFPSEUDO_0... 76.3 2e-12
gi|171742079|ref|ZP_02917886.1| hypothetical protein BIFDEN_0118... 75.9 2e-12
gi|334563641|ref|ZP_08516632.1| F0F1 ATP synthase subunit B [Cor... 75.9 2e-12
gi|229819798|ref|YP_002881324.1| ATP synthase F0 subunit B [Beut... 75.9 2e-12
gi|184200626|ref|YP_001854833.1| ATP synthase subunit b [Kocuria... 75.5 3e-12
gi|310288112|ref|YP_003939371.1| ATP synthase subunit B [Bifidob... 75.1 3e-12
gi|311064985|ref|YP_003971711.1| ATP synthase subunit B [Bifidob... 75.1 3e-12
gi|212715315|ref|ZP_03323443.1| hypothetical protein BIFCAT_0020... 74.7 4e-12
gi|227501701|ref|ZP_03931750.1| F0F1 ATP synthase subunit B [Cor... 73.9 8e-12
gi|296128922|ref|YP_003636172.1| ATP synthase F0, B subunit [Cel... 73.9 8e-12
gi|296268881|ref|YP_003651513.1| ATP synthase F0 subunit B [Ther... 73.6 9e-12
gi|109900597|ref|YP_663852.1| F0F1 ATP synthase subunit B [Pseud... 73.2 1e-11
>gi|15608446|ref|NP_215822.1| F0F1 ATP synthase subunit B [Mycobacterium tuberculosis H37Rv]
gi|15840757|ref|NP_335794.1| F0F1 ATP synthase subunit B [Mycobacterium tuberculosis CDC1551]
gi|31792499|ref|NP_854992.1| F0F1 ATP synthase subunit B [Mycobacterium bovis AF2122/97]
78 more sequence titles
Length=171
Score = 338 bits (866), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 171/171 (100%), Positives = 171/171 (100%), Gaps = 0/171 (0%)
Query 1 MGEVSAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRER 60
MGEVSAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRER
Sbjct 1 MGEVSAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRER 60
Query 61 DAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQ 120
DAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQ
Sbjct 61 DAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQ 120
Query 121 QVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLTASAATR 171
QVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLTASAATR
Sbjct 121 QVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLTASAATR 171
>gi|341601253|emb|CCC63926.1| probable ATP synthase B chain atpF [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=171
Score = 336 bits (862), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 170/171 (99%), Positives = 170/171 (99%), Gaps = 0/171 (0%)
Query 1 MGEVSAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRER 60
MGEVSAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRER
Sbjct 1 MGEVSAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRER 60
Query 61 DAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQ 120
DAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQ
Sbjct 61 DAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQ 120
Query 121 QVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLTASAATR 171
QV STLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLTASAATR
Sbjct 121 QVTSTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLTASAATR 171
>gi|289749863|ref|ZP_06509241.1| ATP synthase subunit B atpF [Mycobacterium tuberculosis T92]
gi|289690450|gb|EFD57879.1| ATP synthase subunit B atpF [Mycobacterium tuberculosis T92]
Length=171
Score = 335 bits (860), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/171 (99%), Positives = 170/171 (99%), Gaps = 0/171 (0%)
Query 1 MGEVSAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRER 60
MGEVSAIVLAASQAAEEGGESSNFLIPNGTF VVLAIFLVVLAVIGTFVVPPILKVLRER
Sbjct 1 MGEVSAIVLAASQAAEEGGESSNFLIPNGTFLVVLAIFLVVLAVIGTFVVPPILKVLRER 60
Query 61 DAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQ 120
DAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQ
Sbjct 61 DAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQ 120
Query 121 QVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLTASAATR 171
QVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLTASAATR
Sbjct 121 QVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLTASAATR 171
>gi|323720263|gb|EGB29362.1| ATP synthase subunit B atpF [Mycobacterium tuberculosis CDC1551A]
gi|339294286|gb|AEJ46397.1| F0F1 ATP synthase subunit B [Mycobacterium tuberculosis CCDC5079]
gi|339297926|gb|AEJ50036.1| F0F1 ATP synthase subunit B [Mycobacterium tuberculosis CCDC5180]
Length=168
Score = 330 bits (845), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 167/168 (99%), Positives = 168/168 (100%), Gaps = 0/168 (0%)
Query 4 VSAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRERDAM 63
+SAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRERDAM
Sbjct 1 MSAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRERDAM 60
Query 64 VAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVA 123
VAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVA
Sbjct 61 VAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVA 120
Query 124 STLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLTASAATR 171
STLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLTASAATR
Sbjct 121 STLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLTASAATR 168
>gi|183984062|ref|YP_001852353.1| ATP synthase B chain AtpF [Mycobacterium marinum M]
gi|226741507|sp|B2HQK6.1|ATPF_MYCMM RecName: Full=ATP synthase subunit b; AltName: Full=ATP synthase
F(0) sector subunit b; AltName: Full=ATPase subunit I; AltName:
Full=F-type ATPase subunit b; Short=F-ATPase subunit
b
gi|183177388|gb|ACC42498.1| ATP synthase B chain AtpF [Mycobacterium marinum M]
Length=170
Score = 276 bits (706), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 140/169 (83%), Positives = 156/169 (93%), Gaps = 1/169 (0%)
Query 1 MGEVSAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRER 60
M +V++IVLAA QAAEEGG ++NFL+PNGTFF VLAIFLVVLAVIGTFVVPPILKVLRER
Sbjct 1 MDDVNSIVLAAGQAAEEGG-TNNFLVPNGTFFFVLAIFLVVLAVIGTFVVPPILKVLRER 59
Query 61 DAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQ 120
DAMVAKTLADNKKS EQFAAAQADY++AM EARVQASS RDNARA+GRKV+EDAR AEQ
Sbjct 60 DAMVAKTLADNKKSAEQFAAAQADYEKAMAEARVQASSYRDNARAEGRKVVEDARAHAEQ 119
Query 121 QVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLTASAA 169
+VASTLQ A+EQLKRERDAVELDLRA+VG MSATLA+RI+GVD+T AA
Sbjct 120 EVASTLQQANEQLKRERDAVELDLRANVGAMSATLANRIVGVDVTTPAA 168
>gi|118619162|ref|YP_907494.1| F0F1 ATP synthase subunit B [Mycobacterium ulcerans Agy99]
gi|226694323|sp|A0PUK4.1|ATPF_MYCUA RecName: Full=ATP synthase subunit b; AltName: Full=ATP synthase
F(0) sector subunit b; AltName: Full=ATPase subunit I; AltName:
Full=F-type ATPase subunit b; Short=F-ATPase subunit
b
gi|118571272|gb|ABL06023.1| ATP synthase B chain AtpF [Mycobacterium ulcerans Agy99]
Length=170
Score = 271 bits (692), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 138/169 (82%), Positives = 154/169 (92%), Gaps = 1/169 (0%)
Query 1 MGEVSAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRER 60
M +V++IVLAA QAAEEGG ++NFL+PNGTFF VLAIFLVVLAVIGTFVVPPILKVLRER
Sbjct 1 MDDVNSIVLAAGQAAEEGG-TNNFLVPNGTFFFVLAIFLVVLAVIGTFVVPPILKVLRER 59
Query 61 DAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQ 120
DAMVA TLADNKKS EQFAAAQADY++AM EARVQASS R NARA+GRKV+EDAR AEQ
Sbjct 60 DAMVAMTLADNKKSAEQFAAAQADYEKAMAEARVQASSYRHNARAEGRKVVEDARAHAEQ 119
Query 121 QVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLTASAA 169
+VASTLQ A+EQLKRERDAVELDLRA+VG MSATLA+RI+GVD+T AA
Sbjct 120 EVASTLQQANEQLKRERDAVELDLRANVGAMSATLANRIVGVDVTTPAA 168
>gi|240169508|ref|ZP_04748167.1| F0F1 ATP synthase subunit B [Mycobacterium kansasii ATCC 12478]
Length=174
Score = 267 bits (682), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 143/174 (83%), Positives = 161/174 (93%), Gaps = 3/174 (1%)
Query 1 MGEVSAIVLAASQAA---EEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVL 57
MG++++IVLAA QAA EEGG++ NFL+PNGTFF VLAIFLVVL VIGTFVVPPILKVL
Sbjct 1 MGDLNSIVLAAGQAASGAEEGGKNQNFLVPNGTFFFVLAIFLVVLGVIGTFVVPPILKVL 60
Query 58 RERDAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVR 117
RERDAMVAKTLAD+KK+ EQFAAAQADY+EAM +ARVQASS RDNARA+GRK +EDAR R
Sbjct 61 RERDAMVAKTLADSKKAAEQFAAAQADYEEAMRKARVQASSYRDNARAEGRKAVEDARAR 120
Query 118 AEQQVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLTASAATR 171
AEQ+VASTLQTA+EQLKRERDAVELDLRA+VGTMSATLASR+LGVD+T SAATR
Sbjct 121 AEQEVASTLQTANEQLKRERDAVELDLRANVGTMSATLASRVLGVDVTTSAATR 174
>gi|342858033|ref|ZP_08714689.1| F0F1 ATP synthase subunit B [Mycobacterium colombiense CECT 3035]
gi|342135366|gb|EGT88532.1| F0F1 ATP synthase subunit B [Mycobacterium colombiense CECT 3035]
Length=176
Score = 258 bits (660), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/164 (80%), Positives = 147/164 (90%), Gaps = 3/164 (1%)
Query 1 MGEVSAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRER 60
MG+ S VLA+SQA EG +NFL+PNGTFF VLAIFL+VLAVIGTFVVPP+++VLRER
Sbjct 1 MGDASLSVLASSQAVAEG---NNFLVPNGTFFFVLAIFLIVLAVIGTFVVPPVMRVLRER 57
Query 61 DAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQ 120
DAMVAKT ADNKK+ EQF AA+ADY+EA+TEARVQASSLRDNARA+GRKV+EDAR RAEQ
Sbjct 58 DAMVAKTAADNKKAAEQFDAAKADYEEALTEARVQASSLRDNARAEGRKVVEDARARAEQ 117
Query 121 QVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDL 164
QV STLQ A EQLKRERDAVELDLRA+V +MSATLASRILGVD+
Sbjct 118 QVMSTLQMASEQLKRERDAVELDLRANVASMSATLASRILGVDV 161
>gi|296170247|ref|ZP_06851840.1| ATP synthase F0 sector subunit B [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895123|gb|EFG74841.1| ATP synthase F0 sector subunit B [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=178
Score = 254 bits (650), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/164 (79%), Positives = 145/164 (89%), Gaps = 2/164 (1%)
Query 1 MGEVSAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRER 60
MG+ S VLA+ Q EGG +NFL+PNGTFF VLAIFL+VLAVIGTFVVPP+++VLRER
Sbjct 2 MGDASLNVLASGQVVAEGG--NNFLVPNGTFFFVLAIFLIVLAVIGTFVVPPVMRVLRER 59
Query 61 DAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQ 120
DAMVAKT ADNKK+ EQF AA+ADY+EA+TEARVQASSLRDNARA+GRKV+EDAR RAEQ
Sbjct 60 DAMVAKTAADNKKAAEQFDAAKADYEEALTEARVQASSLRDNARAEGRKVVEDARARAEQ 119
Query 121 QVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDL 164
QV STLQ A EQLKRERDAVELDLRA+V MSATLASRILGV++
Sbjct 120 QVMSTLQMASEQLKRERDAVELDLRANVAAMSATLASRILGVEV 163
>gi|41408553|ref|NP_961389.1| F0F1 ATP synthase subunit B [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|254774345|ref|ZP_05215861.1| F0F1 ATP synthase subunit B [Mycobacterium avium subsp. avium
ATCC 25291]
gi|81700505|sp|Q73X55.1|ATPF_MYCPA RecName: Full=ATP synthase subunit b; AltName: Full=ATP synthase
F(0) sector subunit b; AltName: Full=ATPase subunit I; AltName:
Full=F-type ATPase subunit b; Short=F-ATPase subunit
b
gi|41396911|gb|AAS04772.1| AtpF [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336460903|gb|EGO39786.1| F0F1-type ATP synthase, beta subunit [Mycobacterium avium subsp.
paratuberculosis S397]
Length=177
Score = 241 bits (615), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/164 (79%), Positives = 146/164 (90%), Gaps = 2/164 (1%)
Query 1 MGEVSAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRER 60
MG+ S VLA+SQ EGG +NFL+PNGTFF VLAIFL+VLAVIGTFVVPP++KVLRER
Sbjct 1 MGDASLSVLASSQVVAEGG--NNFLVPNGTFFFVLAIFLIVLAVIGTFVVPPVMKVLRER 58
Query 61 DAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQ 120
DAMVAKT ADN+K+ EQF AAQADY+EAMTEARVQASSLRDNARA+GRKV+EDAR +AEQ
Sbjct 59 DAMVAKTAADNRKAAEQFEAAQADYEEAMTEARVQASSLRDNARAEGRKVVEDARAKAEQ 118
Query 121 QVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDL 164
+V STLQ A QLKRERDAVELDLRA+V +MSATLASRILGVD+
Sbjct 119 EVLSTLQLAARQLKRERDAVELDLRANVASMSATLASRILGVDV 162
>gi|118466607|ref|YP_880762.1| F0F1 ATP synthase subunit B [Mycobacterium avium 104]
gi|226741502|sp|A0QCX4.1|ATPF_MYCA1 RecName: Full=ATP synthase subunit b; AltName: Full=ATP synthase
F(0) sector subunit b; AltName: Full=ATPase subunit I; AltName:
Full=F-type ATPase subunit b; Short=F-ATPase subunit
b
gi|118167894|gb|ABK68791.1| ATP synthase B chain [Mycobacterium avium 104]
Length=178
Score = 241 bits (615), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/164 (79%), Positives = 146/164 (90%), Gaps = 2/164 (1%)
Query 1 MGEVSAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRER 60
MG+ S VLA+SQ EGG +NFL+PNGTFF VLAIFL+VLAVIGTFVVPP++KVLRER
Sbjct 2 MGDASLSVLASSQVVAEGG--NNFLVPNGTFFFVLAIFLIVLAVIGTFVVPPVMKVLRER 59
Query 61 DAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQ 120
DAMVAKT ADN+K+ EQF AAQADY+EAMTEARVQASSLRDNARA+GRKV+EDAR +AEQ
Sbjct 60 DAMVAKTAADNRKAAEQFEAAQADYEEAMTEARVQASSLRDNARAEGRKVVEDARAKAEQ 119
Query 121 QVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDL 164
+V STLQ A QLKRERDAVELDLRA+V +MSATLASRILGVD+
Sbjct 120 EVLSTLQLAARQLKRERDAVELDLRANVASMSATLASRILGVDV 163
>gi|254821305|ref|ZP_05226306.1| F0F1 ATP synthase subunit B [Mycobacterium intracellulare ATCC
13950]
Length=177
Score = 238 bits (607), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/164 (78%), Positives = 146/164 (90%), Gaps = 2/164 (1%)
Query 1 MGEVSAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRER 60
MG+ S VLA+ Q EGG +NFL+PNGTFF VLAIFL+VLAVIGTFVVPP++KVLRER
Sbjct 1 MGDASLSVLASGQVVAEGG--NNFLVPNGTFFFVLAIFLIVLAVIGTFVVPPVMKVLRER 58
Query 61 DAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQ 120
DAMVAKT AD KK+ EQF AAQADY+EAMTEARVQASSLRDNARA+GRKV+E+AR RAEQ
Sbjct 59 DAMVAKTAADTKKAAEQFEAAQADYEEAMTEARVQASSLRDNARAEGRKVVEEARARAEQ 118
Query 121 QVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDL 164
+V+STLQ A +QLKRERDAVELDLRA+V +M+ATLASRILGVD+
Sbjct 119 EVSSTLQLAAQQLKRERDAVELDLRANVASMAATLASRILGVDV 162
>gi|15827572|ref|NP_301835.1| F0F1 ATP synthase subunit B [Mycobacterium leprae TN]
gi|221230049|ref|YP_002503465.1| F0F1 ATP synthase subunit B [Mycobacterium leprae Br4923]
gi|1168594|sp|P45827.1|ATPF_MYCLE RecName: Full=ATP synthase subunit b; AltName: Full=ATP synthase
F(0) sector subunit b; AltName: Full=ATPase subunit I; AltName:
Full=F-type ATPase subunit b; Short=F-ATPase subunit
b
gi|699343|gb|AAA63104.1| atpF [Mycobacterium leprae]
gi|13093122|emb|CAC31522.1| probable ATP synthase B chain [Mycobacterium leprae]
gi|219933156|emb|CAR71236.1| probable ATP synthase B chain [Mycobacterium leprae Br4923]
Length=170
Score = 235 bits (599), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/171 (80%), Positives = 145/171 (85%), Gaps = 1/171 (0%)
Query 1 MGEVSAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRER 60
M EVSAIV A SQAAEEG +SSNFL+PNGTFF VLAIFLVVL VIGTFVVPPILKVL+ER
Sbjct 1 MFEVSAIVFAVSQAAEEG-KSSNFLLPNGTFFFVLAIFLVVLGVIGTFVVPPILKVLQER 59
Query 61 DAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQ 120
DAMVAKT AD+K S QFAAAQADY+ AM EARVQ+S LRDNAR DGRK IE+ARVRAEQ
Sbjct 60 DAMVAKTDADSKMSAAQFAAAQADYEAAMKEARVQSSFLRDNARVDGRKSIEEARVRAEQ 119
Query 121 QVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLTASAATR 171
V STLQ A EQ+KRERDAVELDLRA G MS LASRILGVD+TAS TR
Sbjct 120 HVVSTLQIAGEQIKRERDAVELDLRAKAGAMSLILASRILGVDITASVVTR 170
>gi|333989945|ref|YP_004522559.1| ATP synthase B chain AtpF [Mycobacterium sp. JDM601]
gi|333485913|gb|AEF35305.1| ATP synthase B chain AtpF [Mycobacterium sp. JDM601]
Length=177
Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/166 (66%), Positives = 135/166 (82%), Gaps = 3/166 (1%)
Query 1 MGEVSAIVLAASQ---AAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVL 57
MG++S +VLAA++ A E GES+NFL+PNGTFFVVL IFLVVL VIGTFVVPPI++VL
Sbjct 1 MGDMSVVVLAATRQVAAGAEEGESANFLLPNGTFFVVLGIFLVVLGVIGTFVVPPIMRVL 60
Query 58 RERDAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVR 117
RERD MV KTLADN++S EQFAAA ADY++ M AR++A+++RD ARA+GRK I++ R
Sbjct 61 RERDNMVTKTLADNRESAEQFAAADADYEKQMAAARLEATTVRDEARAEGRKAIDEQRSA 120
Query 118 AEQQVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVD 163
AE +VA+TLQ A EQLK+E DAV L+A V T+SATLA RILGV+
Sbjct 121 AEAEVATTLQAATEQLKQEGDAVSEQLQARVATLSATLAGRILGVE 166
>gi|118471133|ref|YP_889192.1| F0F1 ATP synthase subunit B [Mycobacterium smegmatis str. MC2
155]
gi|226737871|sp|A0R204.1|ATPF_MYCS2 RecName: Full=ATP synthase subunit b; AltName: Full=ATP synthase
F(0) sector subunit b; AltName: Full=ATPase subunit I; AltName:
Full=F-type ATPase subunit b; Short=F-ATPase subunit
b
gi|118172420|gb|ABK73316.1| bacteriophage lysis protein [Mycobacterium smegmatis str. MC2
155]
Length=170
Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/166 (64%), Positives = 125/166 (76%), Gaps = 0/166 (0%)
Query 1 MGEVSAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRER 60
MGE SA +LAASQAAEEGG SNFLIPNGTFF VL IFL+VL VI +VVPPI KVL ER
Sbjct 1 MGEFSATILAASQAAEEGGGGSNFLIPNGTFFAVLIIFLIVLGVISKWVVPPISKVLAER 60
Query 61 DAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQ 120
+AM+AKT ADN+KS EQ AAAQADY++ M EAR QAS+LRD ARA GR V+++ R +A
Sbjct 61 EAMLAKTAADNRKSAEQVAAAQADYEKEMAEARAQASALRDEARAAGRSVVDEKRAQASG 120
Query 121 QVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLTA 166
+VA TL A +QL + D V L + V +SA LASRILGVD+ +
Sbjct 121 EVAQTLTQADQQLSAQGDQVRSGLESSVDGLSAKLASRILGVDVNS 166
>gi|120405286|ref|YP_955115.1| F0F1 ATP synthase subunit B [Mycobacterium vanbaalenii PYR-1]
gi|226694324|sp|A1TD59.1|ATPF_MYCVP RecName: Full=ATP synthase subunit b; AltName: Full=ATP synthase
F(0) sector subunit b; AltName: Full=ATPase subunit I; AltName:
Full=F-type ATPase subunit b; Short=F-ATPase subunit
b
gi|119958104|gb|ABM15109.1| H+-transporting two-sector ATPase, B/B' subunit [Mycobacterium
vanbaalenii PYR-1]
Length=166
Score = 187 bits (476), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/169 (57%), Positives = 129/169 (77%), Gaps = 4/169 (2%)
Query 1 MGEVSAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRER 60
MGE++ ++AA EEGG +SNFLIPNGTFFVVL IFL+VL VI +VVPP+ KVL ER
Sbjct 1 MGELTTSIVAA----EEGGGTSNFLIPNGTFFVVLLIFLIVLGVIAKWVVPPVSKVLAER 56
Query 61 DAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQ 120
+AM+AKT ADN+KS EQ AAAQADYD+ M +AR +ASS+RD AR GR+V+++ R A
Sbjct 57 EAMLAKTAADNRKSAEQVAAAQADYDKTMADARGEASSIRDEARVAGRQVVDEKRAVASG 116
Query 121 QVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLTASAA 169
+VA T+++A +QL ++ A + +L++ V +SATLASRILGVD+ + +
Sbjct 117 EVAETVKSADQQLSQQGSAAQSELQSSVDGLSATLASRILGVDVNSGGS 165
>gi|145222902|ref|YP_001133580.1| F0F1 ATP synthase subunit B [Mycobacterium gilvum PYR-GCK]
gi|315443367|ref|YP_004076246.1| F0F1-type ATP synthase subunit beta [Mycobacterium sp. Spyr1]
gi|226741521|sp|A4T8K9.1|ATPF_MYCGI RecName: Full=ATP synthase subunit b; AltName: Full=ATP synthase
F(0) sector subunit b; AltName: Full=ATPase subunit I; AltName:
Full=F-type ATPase subunit b; Short=F-ATPase subunit
b
gi|145215388|gb|ABP44792.1| H+-transporting two-sector ATPase, B/B' subunit [Mycobacterium
gilvum PYR-GCK]
gi|315261670|gb|ADT98411.1| F0F1-type ATP synthase, beta subunit [Mycobacterium sp. Spyr1]
Length=171
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/165 (58%), Positives = 129/165 (79%), Gaps = 1/165 (0%)
Query 1 MGEVSAIVLAAS-QAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRE 59
MG++++ LA++ AAEEGG +SNFL+PNGTFF VL IFL+VL VI +VVPPI KVL E
Sbjct 1 MGDLTSTNLASAILAAEEGGGTSNFLLPNGTFFAVLLIFLIVLGVIAKWVVPPISKVLAE 60
Query 60 RDAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAE 119
R+AM+AKT ADN+KS EQ AAA+ADYD+ + EAR +ASS+RD AR GR+V+++ R A
Sbjct 61 REAMLAKTAADNRKSAEQVAAARADYDKTLAEARGEASSIRDEARVAGRQVVDEKRATAN 120
Query 120 QQVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDL 164
+VA T++TA E+L ++ A + +L++ V +SATLASRILGVD+
Sbjct 121 GEVAETVKTADEKLTQQGSAAQSELQSSVDALSATLASRILGVDV 165
>gi|108800844|ref|YP_641041.1| F0F1 ATP synthase subunit B [Mycobacterium sp. MCS]
gi|119869984|ref|YP_939936.1| F0F1 ATP synthase subunit B [Mycobacterium sp. KMS]
gi|126436442|ref|YP_001072133.1| F0F1 ATP synthase subunit B [Mycobacterium sp. JLS]
6 more sequence titles
gi|123069831|sp|Q1B549.1|ATPF_MYCSS RecName: Full=ATP synthase subunit b; AltName: Full=ATP synthase
F(0) sector subunit b; AltName: Full=ATPase subunit I; AltName:
Full=F-type ATPase subunit b; Short=F-ATPase subunit
b
gi|226737872|sp|A3Q3B5.1|ATPF_MYCSJ RecName: Full=ATP synthase subunit b; AltName: Full=ATP synthase
F(0) sector subunit b; AltName: Full=ATPase subunit I; AltName:
Full=F-type ATPase subunit b; Short=F-ATPase subunit
b
gi|226737873|sp|A1UJY8.1|ATPF_MYCSK RecName: Full=ATP synthase subunit b; AltName: Full=ATP synthase
F(0) sector subunit b; AltName: Full=ATPase subunit I; AltName:
Full=F-type ATPase subunit b; Short=F-ATPase subunit
b
gi|108771263|gb|ABG09985.1| H+-transporting two-sector ATPase, B/B' subunit [Mycobacterium
sp. MCS]
gi|119696073|gb|ABL93146.1| H+-transporting two-sector ATPase, B/B' subunit [Mycobacterium
sp. KMS]
gi|126236242|gb|ABN99642.1| H+-transporting two-sector ATPase, B/B' subunit [Mycobacterium
sp. JLS]
Length=169
Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/170 (55%), Positives = 126/170 (75%), Gaps = 5/170 (2%)
Query 1 MGEVSAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRER 60
MG++S +LAA EEGG NFL+PNGTFF VL IFL+VL VI +VVPPI KVL+ER
Sbjct 1 MGDLSTTILAA----EEGG-GGNFLVPNGTFFFVLLIFLIVLGVIAKWVVPPISKVLQER 55
Query 61 DAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQ 120
+AMV KT+ DN+K+ + FAAAQ D + M +AR +AS +RD AR +GRK++ED R RA
Sbjct 56 EAMVTKTVEDNRKAADLFAAAQGDSQQVMAKARREASGIRDEARGEGRKILEDMRSRASA 115
Query 121 QVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLTASAAT 170
+ A+TLQ +E+L R+ +L++ + T+SATLASR+LGVD++++AAT
Sbjct 116 ESAATLQKTNEELSRQGQQTAAELQSSIETLSATLASRVLGVDISSAAAT 165
>gi|169628540|ref|YP_001702189.1| F0F1 ATP synthase subunit B [Mycobacterium abscessus ATCC 19977]
gi|226741504|sp|B1MLV8.1|ATPF_MYCA9 RecName: Full=ATP synthase subunit b; AltName: Full=ATP synthase
F(0) sector subunit b; AltName: Full=ATPase subunit I; AltName:
Full=F-type ATPase subunit b; Short=F-ATPase subunit
b
gi|169240507|emb|CAM61535.1| ATP synthase B chain AtpF [Mycobacterium abscessus]
Length=177
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/151 (54%), Positives = 110/151 (73%), Gaps = 0/151 (0%)
Query 18 GGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRERDAMVAKTLADNKKSDEQ 77
GG+ +NFLIPNGTFFVVLAIFL+VLAVIGTFVVPPI KVL+ R+ MV KT DN+ + EQ
Sbjct 22 GGKQNNFLIPNGTFFVVLAIFLIVLAVIGTFVVPPIQKVLKAREDMVTKTAEDNRNAAEQ 81
Query 78 FAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLKRER 137
F AA+ADY + + +AR A+++RD ARA+GR ++ED R RA + + +TA +L R+
Sbjct 82 FTAAEADYKDELAKARGAATAVRDEARAEGRGILEDMRQRANAEATAVTETAAAELARQG 141
Query 138 DAVELDLRAHVGTMSATLASRILGVDLTASA 168
+ +L +V ++S TLA R+LGV L+ A
Sbjct 142 EVTAGELATNVDSLSRTLAERVLGVSLSEPA 172
>gi|262201856|ref|YP_003273064.1| H+transporting two-sector ATPase B/B' subunit [Gordonia bronchialis
DSM 43247]
gi|262085203|gb|ACY21171.1| H+transporting two-sector ATPase B/B' subunit [Gordonia bronchialis
DSM 43247]
Length=166
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/153 (51%), Positives = 98/153 (65%), Gaps = 0/153 (0%)
Query 14 AAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRERDAMVAKTLADNKK 73
AAEEG + NFLIPNGTFFV L IF++VL VI T VVPPI+KVL ERDAMVAKT+ DNK
Sbjct 8 AAEEGEKPPNFLIPNGTFFVCLLIFVIVLVVIRTMVVPPIVKVLDERDAMVAKTIEDNKS 67
Query 74 SDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQL 133
+ + A Y A+ EAR A+ +RD ARA+ + + A+ RA Q+ + L E L
Sbjct 68 AAAIYEDADTQYRAALKEARGDATRIRDEARAEANEELAAAKRRATQEADAALAATSESL 127
Query 134 KRERDAVELDLRAHVGTMSATLASRILGVDLTA 166
E + RA V +SATLA R+LG D++A
Sbjct 128 AAEGERAASTARADVERLSATLAGRVLGTDISA 160
>gi|317506174|ref|ZP_07963995.1| ATP synthase B/B' CF(0) [Segniliparus rugosus ATCC BAA-974]
gi|316255519|gb|EFV14768.1| ATP synthase B/B' CF(0) [Segniliparus rugosus ATCC BAA-974]
Length=174
Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/160 (43%), Positives = 103/160 (65%), Gaps = 6/160 (3%)
Query 1 MGEVSAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRER 60
M +++A VLA EG + SNFLIP+GTF V L IFL+VLA+I FVVPPI VL++R
Sbjct 1 MTQMTASVLA------EGEKKSNFLIPDGTFLVELVIFLIVLAIIWKFVVPPIQSVLQDR 54
Query 61 DAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQ 120
+A VAKT DN+K+ + A+ Y E + AR +A+++R+ ARA+G+KV+ AR A+
Sbjct 55 EARVAKTNEDNQKAAQALQNAERKYSEELAGARTEATAIREQARAEGQKVLAAARAEAQA 114
Query 121 QVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRIL 160
+ A +L+ + D + +L++ VG +S LA ++L
Sbjct 115 EADQAQAQAEGELRAQADRIGSELKSSVGPLSEELAGKVL 154
>gi|331695529|ref|YP_004331768.1| ATP synthase subunit b [Pseudonocardia dioxanivorans CB1190]
gi|326950218|gb|AEA23915.1| ATP synthase subunit b [Pseudonocardia dioxanivorans CB1190]
Length=184
Score = 110 bits (275), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/147 (40%), Positives = 90/147 (62%), Gaps = 0/147 (0%)
Query 15 AEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRERDAMVAKTLADNKKS 74
A+ GGE++NFL+PN T V + IFL+VL FVVPP+ K +RERD MV K + + ++
Sbjct 7 AQGGGETTNFLLPNFTIVVEIVIFLLVLFFFYRFVVPPLTKAMRERDEMVRKQVEERDRA 66
Query 75 DEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLK 134
A+ Y ++ EAR +A+++RD ARAD +++ E R +++VA + +L
Sbjct 67 VRTLREAEERYAASLAEARGEATAIRDEARADAQQIRETMRAETDREVARLREQGEAELA 126
Query 135 RERDAVELDLRAHVGTMSATLASRILG 161
+R LRA +G +S+ LASR+LG
Sbjct 127 AQRAETARSLRAEIGGLSSDLASRVLG 153
>gi|296393124|ref|YP_003658008.1| ATP synthase F0 subunit B [Segniliparus rotundus DSM 44985]
gi|296180271|gb|ADG97177.1| ATP synthase F0, B subunit [Segniliparus rotundus DSM 44985]
Length=173
Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/154 (41%), Positives = 95/154 (62%), Gaps = 0/154 (0%)
Query 7 IVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRERDAMVAK 66
++L + EG + NFLIPNGTF V L IF++VLAVI FVVPPI VL++R+A AK
Sbjct 1 MILTTASVLAEGEKKDNFLIPNGTFLVELVIFILVLAVIWKFVVPPIQTVLQDREAQAAK 60
Query 67 TLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTL 126
T DN K+ + A+ Y + + AR +A+++RD ARA+G+KV+ +AR A+ +
Sbjct 61 TNEDNHKAAQALQDAKRKYSDELAGARGEATAIRDQARAEGQKVLAEARAAAQAEADQAQ 120
Query 127 QTAHEQLKRERDAVELDLRAHVGTMSATLASRIL 160
A +L+ + D +L++ V +S LA ++L
Sbjct 121 AQADSELRAQADRASAELKSSVRPLSEELADKVL 154
>gi|296138978|ref|YP_003646221.1| H+transporting two-sector ATPase B/B' subunit [Tsukamurella paurometabola
DSM 20162]
gi|296027112|gb|ADG77882.1| H+transporting two-sector ATPase B/B' subunit [Tsukamurella paurometabola
DSM 20162]
Length=170
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/150 (40%), Positives = 89/150 (60%), Gaps = 1/150 (0%)
Query 23 NFLIPN-GTFFVVLAIFLVVLAVIGTFVVPPILKVLRERDAMVAKTLADNKKSDEQFAAA 81
NFL+P GTF L IFL+VL VI FV P I +VL +R+ M+ +T D + + + F A
Sbjct 7 NFLLPTAGTFITCLIIFLIVLGVIWFFVAPSIQQVLDDREKMINQTANDGRAAAKGFEDA 66
Query 82 QADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLKRERDAVE 141
+A+Y + AR +A S+RD ARA GR +E+ + RA + + + EQL+ ++
Sbjct 67 EAEYRAGLASARGEAGSIRDEARASGRAALEEQKQRASAEADAITREKTEQLRAAGESAA 126
Query 142 LDLRAHVGTMSATLASRILGVDLTASAATR 171
RA + +SA+LASR+LG D+T A +
Sbjct 127 AAARADLAPLSASLASRVLGFDVTQDPALK 156
>gi|343928067|ref|ZP_08767532.1| ATP synthase subunit b [Gordonia alkanivorans NBRC 16433]
gi|343762075|dbj|GAA14458.1| ATP synthase subunit b [Gordonia alkanivorans NBRC 16433]
Length=162
Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/149 (43%), Positives = 94/149 (64%), Gaps = 0/149 (0%)
Query 23 NFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRERDAMVAKTLADNKKSDEQFAAAQ 82
NFL+PNGTFFVVL IF+++L VI FVVPPI +VL ERD M+ +T DN+ + +F A
Sbjct 7 NFLLPNGTFFVVLLIFVILLLVIRKFVVPPIQQVLEERDEMIHRTAEDNRTAAAEFEDAD 66
Query 83 ADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLKRERDAVEL 142
+ + EAR +A++ RD ARA+GR+ + + + RA + + LQ+ +L + +
Sbjct 67 VQFRSLLKEARGEATAKRDEARAEGREQLNEMKQRATAEADAALQSTSSELAAQGEQAAS 126
Query 143 DLRAHVGTMSATLASRILGVDLTASAATR 171
A V T++ TLA+R+LGVD + TR
Sbjct 127 TAAADVDTLAKTLAARVLGVDSATLSDTR 155
>gi|116671155|ref|YP_832088.1| ATP synthase F0 subunit B [Arthrobacter sp. FB24]
gi|226741295|sp|A0JY68.1|ATPF_ARTS2 RecName: Full=ATP synthase subunit b; AltName: Full=ATP synthase
F(0) sector subunit b; AltName: Full=ATPase subunit I; AltName:
Full=F-type ATPase subunit b; Short=F-ATPase subunit
b
gi|116611264|gb|ABK03988.1| ATP synthase F0 subcomplex B subunit [Arthrobacter sp. FB24]
Length=182
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/147 (38%), Positives = 88/147 (60%), Gaps = 1/147 (0%)
Query 20 ESSNFLIPN-GTFFVVLAIFLVVLAVIGTFVVPPILKVLRERDAMVAKTLADNKKSDEQF 78
E +N L+PN VVLA F V+ ++ FVVP K ER + +A +K+ +
Sbjct 11 EGTNPLVPNPWEMGVVLAGFAVLFYIVVKFVVPMFEKTFAERAEAIEGGIAKAEKAQAEA 70
Query 79 AAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLKRERD 138
+AA +Y + +T+AR +A+ +R+ ARA+G +++ D + +A + A AH Q++ ER
Sbjct 71 SAALEEYKQQLTDARAEANRIREEARAEGAQILADLKEKAAAESARITAHAHAQIESERQ 130
Query 139 AVELDLRAHVGTMSATLASRILGVDLT 165
A + LRA VGT++ TLASRI+G L+
Sbjct 131 AAVVSLRAEVGTLATTLASRIVGESLS 157
>gi|68536424|ref|YP_251129.1| F0F1 ATP synthase subunit B [Corynebacterium jeikeium K411]
gi|260577557|ref|ZP_05845496.1| ATP synthase F0, B subunit [Corynebacterium jeikeium ATCC 43734]
gi|123650711|sp|Q4JUJ6.1|ATPF_CORJK RecName: Full=ATP synthase subunit b; AltName: Full=ATP synthase
F(0) sector subunit b; AltName: Full=ATPase subunit I; AltName:
Full=F-type ATPase subunit b; Short=F-ATPase subunit
b
gi|68264023|emb|CAI37511.1| ATP synthase B chain [Corynebacterium jeikeium K411]
gi|258604281|gb|EEW17519.1| ATP synthase F0, B subunit [Corynebacterium jeikeium ATCC 43734]
Length=186
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/163 (34%), Positives = 93/163 (58%), Gaps = 5/163 (3%)
Query 5 SAIVLAASQAAEEGGESSNFLIPNGTFFVVLAI--FLVVLAVIGTFVVPPILKVLRERDA 62
+ +LAA + E ES N LIP + +V +I F V+L V FV+P +VL +R+
Sbjct 3 NTFLLAAEKLPME--ESVNPLIP-PLYDIVWSIIPFAVILFVFWKFVLPKFQEVLNQRED 59
Query 63 MVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQV 122
+ + + + + AA Y+ + EAR +A+ +RD+AR+ G+K+I D + +A ++
Sbjct 60 QIEGGIRRAESAQAEAKAALEKYNAQLAEARTEAAQIRDDARSQGQKIIADMKAQATEES 119
Query 123 ASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLT 165
+++ H+QL+ +R AV DLR +G S LA R+LG L+
Sbjct 120 NRIVESGHKQLEAQRSAVVTDLRKEMGENSINLAERLLGEQLS 162
>gi|257069068|ref|YP_003155323.1| ATP synthase F0 subcomplex B subunit [Brachybacterium faecium
DSM 4810]
gi|256559886|gb|ACU85733.1| ATP synthase F0 subcomplex B subunit [Brachybacterium faecium
DSM 4810]
Length=179
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/149 (36%), Positives = 85/149 (58%), Gaps = 1/149 (0%)
Query 24 FLIPNGTFFVVLAIFLVVLA-VIGTFVVPPILKVLRERDAMVAKTLADNKKSDEQFAAAQ 82
LIP IFLV+ A V FV+P + VL ER + + + +K EQ +
Sbjct 13 LLIPLPQEIWWSLIFLVIFAGVFMKFVLPRMNAVLDERAEKIEGGIRNAEKVQEQVDQLK 72
Query 83 ADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLKRERDAVEL 142
+D ++ + AR +A+S+R+ ARADG+K++++AR RA+ + L +QL ER A
Sbjct 73 SDQEQELAAARQEAASIREKARADGQKIVDEARARADAESERVLAAGRQQLSAERIAAST 132
Query 143 DLRAHVGTMSATLASRILGVDLTASAATR 171
+LR VGT+++ LAS+I+G L+ +R
Sbjct 133 ELRGEVGTLASDLASKIVGESLSDDERSR 161
>gi|220913087|ref|YP_002488396.1| ATP synthase F0 subunit beta [Arthrobacter chlorophenolicus A6]
gi|219859965|gb|ACL40307.1| ATP synthase F0, B subunit [Arthrobacter chlorophenolicus A6]
Length=184
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/148 (36%), Positives = 86/148 (59%), Gaps = 1/148 (0%)
Query 19 GESSNFLIPN-GTFFVVLAIFLVVLAVIGTFVVPPILKVLRERDAMVAKTLADNKKSDEQ 77
GE N L+PN VVL F +++ ++ FVVP K ER + +A +K+ +
Sbjct 12 GEKVNPLVPNLWEMGVVLVGFAILMFIVVKFVVPMFEKTFAERAEAIEGGIAKAEKAQAE 71
Query 78 FAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLKRER 137
+AA +Y + +T+AR +A+ +R+ ARA+G +++ D + +A + A AH Q++ ER
Sbjct 72 ASAALEEYKQQLTDARTEANRIREEARAEGAQILADLKEKAAAESARITAQAHAQIESER 131
Query 138 DAVELDLRAHVGTMSATLASRILGVDLT 165
A + LR+ VGT++ TLA RI+G L
Sbjct 132 QAAVVSLRSEVGTLATTLAGRIVGESLN 159
>gi|340794790|ref|YP_004760253.1| ATP synthase subunit B [Corynebacterium variabile DSM 44702]
gi|340534700|gb|AEK37180.1| ATP synthase B chain [Corynebacterium variabile DSM 44702]
Length=185
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/162 (36%), Positives = 87/162 (54%), Gaps = 3/162 (1%)
Query 7 IVLAASQAAEEGGESSNFLIPNGTFFVV-LAIFLVVLAVIGTFVVPPILKVLRERDAMVA 65
+LAA + E +S N LIP V L F+++ + FV+P +VL ER+ +
Sbjct 5 FILAAEELPLE--DSPNPLIPASYDIVWSLVCFIIIFVLFWKFVLPTFKRVLAEREEQIE 62
Query 66 KTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVAST 125
+ + + E+ AA Y+ + EAR +AS +RD+ARA G+K+I +A +AE +V
Sbjct 63 GGIQRAEAAQEEAKAALEKYNSQLAEARTEASQIRDDARAQGQKIIAEANTKAEAEVKRK 122
Query 126 LQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLTAS 167
+ L +RDAV DLR +G S LA ++LG DL S
Sbjct 123 AADGEKALLAQRDAVVSDLRKDLGAASINLAEQLLGEDLADS 164
>gi|269957236|ref|YP_003327025.1| ATP synthase F0 subunit B [Xylanimonas cellulosilytica DSM 15894]
gi|269305917|gb|ACZ31467.1| ATP synthase F0, B subunit [Xylanimonas cellulosilytica DSM 15894]
Length=194
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/148 (36%), Positives = 85/148 (58%), Gaps = 1/148 (0%)
Query 23 NFLIPNGTFFVVLAIFLVVLAV-IGTFVVPPILKVLRERDAMVAKTLADNKKSDEQFAAA 81
+ +P + A+ LV++AV FV+PP+LKVL ER + +A ++ E A
Sbjct 19 DLFLPADYDLLWSAVVLVIIAVAFYKFVLPPMLKVLDERTEAIEGGMAQAAQAKEAAEQA 78
Query 82 QADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLKRERDAVE 141
E +T AR A+ +RD AR +G+ ++ + R +A+++ A +TAH Q++ ER A
Sbjct 79 LERQQELLTAARSDAAKVRDEAREEGKAIVAEHRSKAQEEAARITETAHRQIEAERQAAA 138
Query 142 LDLRAHVGTMSATLASRILGVDLTASAA 169
+ LR VG ++ LAS+I+G +L SAA
Sbjct 139 VSLRTDVGDLATQLASKIVGEELADSAA 166
>gi|325963830|ref|YP_004241736.1| ATP synthase F0 subcomplex subunit beta [Arthrobacter phenanthrenivorans
Sphe3]
gi|323469917|gb|ADX73602.1| ATP synthase F0 subcomplex B subunit [Arthrobacter phenanthrenivorans
Sphe3]
Length=183
Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/149 (36%), Positives = 87/149 (59%), Gaps = 3/149 (2%)
Query 14 AAEEGGESSNFLIPN-GTFFVVLAIFLVVLAVIGTFVVPPILKVLRERDAMVAKTLADNK 72
AA EG N L+PN VVL F +++ ++ FVVP K ER + +A +
Sbjct 8 AATEG--EINPLMPNLWEMGVVLVGFAILMFIVVKFVVPMFEKTFAERAEAIEGGIAKAE 65
Query 73 KSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQ 132
K+ + +AA +Y + +T+AR +A+ +R+ ARA+G +++ D + +A + A AH Q
Sbjct 66 KAQAEASAALEEYKQQLTDARTEANRIREEARAEGAQILADLKEKAAAESARITAQAHAQ 125
Query 133 LKRERDAVELDLRAHVGTMSATLASRILG 161
++ ER A + LR+ VGT++ TLA RI+G
Sbjct 126 IESERQAAVVSLRSEVGTLATTLAGRIVG 154
>gi|183602784|ref|ZP_02964147.1| F0F1 ATP synthase subunit B [Bifidobacterium animalis subsp.
lactis HN019]
gi|219683120|ref|YP_002469503.1| ATP synthase subunit B [Bifidobacterium animalis subsp. lactis
AD011]
gi|241191449|ref|YP_002968843.1| F0F1 ATP synthase subunit B [Bifidobacterium animalis subsp.
lactis Bl-04]
10 more sequence titles
Length=175
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/147 (32%), Positives = 80/147 (55%), Gaps = 1/147 (0%)
Query 23 NFLIPNGTFFVVLAIFLVVLAVI-GTFVVPPILKVLRERDAMVAKTLADNKKSDEQFAAA 81
+ +P V I L+++A+ F +P V ER A + LA +++ + A
Sbjct 9 DLFLPETYDIVWSLIILIIVALFFYKFFLPKFQSVFDERTAKIEGGLAKAEQAQKDAEEA 68
Query 82 QADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLKRERDAVE 141
+ Y ++ ARV+AS +RD+ARA+ +I DAR RAE + A A L+ ++
Sbjct 69 KKKYQAQLSTARVEASKIRDDARAEASHIIADARSRAETEAAQITANAERSLESQQQKAM 128
Query 142 LDLRAHVGTMSATLASRILGVDLTASA 168
++L+ VG+++ +LAS+ILG +L SA
Sbjct 129 VNLKGEVGSLATSLASKILGSELQDSA 155
>gi|119026449|ref|YP_910294.1| F0F1 ATP synthase subunit B [Bifidobacterium adolescentis ATCC
15703]
gi|226741309|sp|A1A3C9.1|ATPF_BIFAA RecName: Full=ATP synthase subunit b; AltName: Full=ATP synthase
F(0) sector subunit b; AltName: Full=ATPase subunit I; AltName:
Full=F-type ATPase subunit b; Short=F-ATPase subunit
b
gi|118766033|dbj|BAF40212.1| protein with similarity to ATP synthase B chain [Bifidobacterium
adolescentis ATCC 15703]
Length=173
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/141 (33%), Positives = 73/141 (52%), Gaps = 0/141 (0%)
Query 24 FLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRERDAMVAKTLADNKKSDEQFAAAQA 83
FL + F L I ++V F +P V ER A + +A +++ + A+A
Sbjct 11 FLPKSYDIFWSLVILIIVAVFFYKFFLPKFQAVFDERAAKIEGGIAKAEQAQKDADEAKA 70
Query 84 DYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLKRERDAVELD 143
YD ++ ARV+AS +RD+ARA+ +I DAR RAE A TA ++ ++ +
Sbjct 71 KYDAQLSNARVEASKIRDDARAEASHIIADARTRAEADAAQITATAQRSIESQQQQALVS 130
Query 144 LRAHVGTMSATLASRILGVDL 164
L+ VG ++ LA +ILG L
Sbjct 131 LKGEVGVLATALAGKILGSKL 151
>gi|154488036|ref|ZP_02029153.1| hypothetical protein BIFADO_01605 [Bifidobacterium adolescentis
L2-32]
gi|154083509|gb|EDN82554.1| hypothetical protein BIFADO_01605 [Bifidobacterium adolescentis
L2-32]
Length=173
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/141 (33%), Positives = 73/141 (52%), Gaps = 0/141 (0%)
Query 24 FLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRERDAMVAKTLADNKKSDEQFAAAQA 83
FL + F L I ++V F +P V ER A + +A +++ + A+A
Sbjct 11 FLPKSYDIFWSLVILIIVAVFFYKFFLPKFQAVFDERAAKIEGGIAKAEQAQKDADEAKA 70
Query 84 DYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLKRERDAVELD 143
YD ++ ARV+AS +RD+ARA+ +I DAR RAE A TA ++ ++ +
Sbjct 71 KYDAQLSSARVEASKIRDDARAEASHIIADARTRAEADAAQITATAQRSIESQQQQALVS 130
Query 144 LRAHVGTMSATLASRILGVDL 164
L+ VG ++ LA +ILG L
Sbjct 131 LKGEVGVLATALAGKILGSKL 151
>gi|336325971|ref|YP_004605937.1| F0F1 ATP synthase subunit B [Corynebacterium resistens DSM 45100]
gi|336101953|gb|AEI09773.1| F0F1 ATP synthase subunit B [Corynebacterium resistens DSM 45100]
Length=186
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/163 (32%), Positives = 94/163 (58%), Gaps = 5/163 (3%)
Query 5 SAIVLAASQAAEEGGESSNFLIPNGTFFVVLAI--FLVVLAVIGTFVVPPILKVLRERDA 62
+ +LAA Q E + N L+P + VV ++ F+++L V FV+P +VL +R+
Sbjct 3 NTFLLAAEQLPLE--KPVNPLLP-PLYDVVWSLIPFVIILLVFWKFVLPKFQEVLNQRED 59
Query 63 MVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQV 122
+ + + + + AA Y+ + EAR +A+ +RD+AR G+K+I D + +A ++
Sbjct 60 QIEGGMQRAEAAQAEAQAALEKYNAQLAEARTEAAQIRDDARNQGQKIIADMKAQATEES 119
Query 123 ASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLT 165
A +++ ++QL+ +R AV DLR +G S +LA R+LG L+
Sbjct 120 ARIVESGNKQLEAQRSAVVSDLRKEMGENSISLAERLLGEQLS 162
>gi|119963814|ref|YP_948318.1| ATP synthase F0, B subunit [Arthrobacter aurescens TC1]
gi|226741351|sp|A1R7V6.1|ATPF_ARTAT RecName: Full=ATP synthase subunit b; AltName: Full=ATP synthase
F(0) sector subunit b; AltName: Full=ATPase subunit I; AltName:
Full=F-type ATPase subunit b; Short=F-ATPase subunit
b
gi|119950673|gb|ABM09584.1| ATP synthase F0, B subunit [Arthrobacter aurescens TC1]
Length=185
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/153 (36%), Positives = 89/153 (59%), Gaps = 1/153 (0%)
Query 14 AAEEGGESSNFLIPN-GTFFVVLAIFLVVLAVIGTFVVPPILKVLRERDAMVAKTLADNK 72
AA EG +N L+PN VVL F V++ ++ FVVP K ER + +A +
Sbjct 8 AATEGAAEANPLVPNVWEMGVVLVGFAVLMYIVVKFVVPMFEKTFAERAEAIEGGIAKAE 67
Query 73 KSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQ 132
+ + +AA +Y + +T+AR +A+ +R+ ARA+G +++ D + +A + A + AH
Sbjct 68 AAQAEASAALEEYKQQLTDARAEANRIREEARAEGAQILADLKAKAAAESARITEQAHAA 127
Query 133 LKRERDAVELDLRAHVGTMSATLASRILGVDLT 165
++ ER A + LR+ VGT++ TLA RI+G LT
Sbjct 128 IESERQAAVVSLRSEVGTLATTLAGRIVGEALT 160
>gi|284992520|ref|YP_003411074.1| ATP synthase F0 subunit B [Geodermatophilus obscurus DSM 43160]
gi|284065765|gb|ADB76703.1| ATP synthase F0, B subunit [Geodermatophilus obscurus DSM 43160]
Length=195
Score = 77.4 bits (189), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/146 (31%), Positives = 76/146 (53%), Gaps = 1/146 (0%)
Query 20 ESSNFLIPN-GTFFVVLAIFLVVLAVIGTFVVPPILKVLRERDAMVAKTLADNKKSDEQF 78
ES+N L+P G + F + V+G FV P +V R R + + + +
Sbjct 7 ESANPLLPPVGEIIIGTITFAIAFFVLGKFVWPRFEQVFRARREAIEGGIERAESMQAEA 66
Query 79 AAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLKRERD 138
AA Y + EAR +A+ +RD ARA+G++++E+ R +A+++ A + EQL R
Sbjct 67 KAALEQYRAQLAEARTEAAQIRDQARAEGQQILEELRAQAQEESARIVARGEEQLATSRQ 126
Query 139 AVELDLRAHVGTMSATLASRILGVDL 164
V +LR +G ++ LA R++G L
Sbjct 127 QVVNELRGQIGRLAVDLAGRVVGESL 152
>gi|225352597|ref|ZP_03743620.1| hypothetical protein BIFPSEUDO_04222 [Bifidobacterium pseudocatenulatum
DSM 20438]
gi|225156791|gb|EEG70185.1| hypothetical protein BIFPSEUDO_04222 [Bifidobacterium pseudocatenulatum
DSM 20438]
Length=173
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/141 (32%), Positives = 73/141 (52%), Gaps = 0/141 (0%)
Query 24 FLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRERDAMVAKTLADNKKSDEQFAAAQA 83
FL + F L I ++V F +P V ER A + +A +++ + A+A
Sbjct 11 FLPKSYDIFWSLVILIIVAVFFYKFFLPKFQAVFDERAAKIEGGIAKAEQAQKDADEAKA 70
Query 84 DYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLKRERDAVELD 143
Y+ +++ARV+AS +RD+AR + +I DAR RAE A TA ++ ++ +
Sbjct 71 KYEAQLSKARVEASKIRDDARTEASHIIADARTRAENDAAQITATAQRSIESQQQQALVS 130
Query 144 LRAHVGTMSATLASRILGVDL 164
L+ VG ++ LA +ILG L
Sbjct 131 LKGEVGVLATALAGKILGSKL 151
>gi|171742079|ref|ZP_02917886.1| hypothetical protein BIFDEN_01184 [Bifidobacterium dentium ATCC
27678]
gi|283456795|ref|YP_003361359.1| ATP synthase subunit B [Bifidobacterium dentium Bd1]
gi|306822062|ref|ZP_07455446.1| ATP synthase F0 sector subunit B [Bifidobacterium dentium ATCC
27679]
gi|309802600|ref|ZP_07696704.1| ATP synthase F0, B subunit [Bifidobacterium dentium JCVIHMP022]
gi|171277693|gb|EDT45354.1| hypothetical protein BIFDEN_01184 [Bifidobacterium dentium ATCC
27678]
gi|283103429|gb|ADB10535.1| ATP synthase B chain [Bifidobacterium dentium Bd1]
gi|304554662|gb|EFM42565.1| ATP synthase F0 sector subunit B [Bifidobacterium dentium ATCC
27679]
gi|308220664|gb|EFO76972.1| ATP synthase F0, B subunit [Bifidobacterium dentium JCVIHMP022]
Length=173
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/141 (32%), Positives = 73/141 (52%), Gaps = 0/141 (0%)
Query 24 FLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRERDAMVAKTLADNKKSDEQFAAAQA 83
FL + F L I ++V F +P V ER A + +A +++ + A+A
Sbjct 11 FLPKSYDIFWSLVILIIVAVFFYKFFLPKFQAVFDERAAKIEGGIAKAEQAQKDADEAKA 70
Query 84 DYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLKRERDAVELD 143
Y+ ++ ARV+AS +RD+ARA+ +I DAR RAE A TA ++ ++ +
Sbjct 71 KYEAQLSTARVEASKIRDDARAEASHIIADARSRAESDAAQITATAQRSIESQQQQALVS 130
Query 144 LRAHVGTMSATLASRILGVDL 164
L+ VG ++ LA +ILG L
Sbjct 131 LKGEVGVLATALAGKILGSKL 151
>gi|334563641|ref|ZP_08516632.1| F0F1 ATP synthase subunit B [Corynebacterium bovis DSM 20582]
Length=180
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/142 (32%), Positives = 80/142 (57%), Gaps = 1/142 (0%)
Query 25 LIPNGTFFVV-LAIFLVVLAVIGTFVVPPILKVLRERDAMVAKTLADNKKSDEQFAAAQA 83
LIP V L F++VL + FV+P +VL +R+ + + + + + AA
Sbjct 15 LIPELYDLVWSLVPFIIVLLIFWKFVLPKFQEVLTQREDQIEGGIQRAEAAQAEAKAALE 74
Query 84 DYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLKRERDAVELD 143
Y+ + EAR +A+ +RD AR+ G++++ D + +A + A ++ H+QL+ +R +V +
Sbjct 75 KYNAQLAEARTEAAQIRDEARSQGQRIVADMKAQASDESARIVEAGHKQLEAQRASVVAE 134
Query 144 LRAHVGTMSATLASRILGVDLT 165
LR +G+ S LA RILG L+
Sbjct 135 LRKDMGSQSVALAERILGAQLS 156
>gi|229819798|ref|YP_002881324.1| ATP synthase F0 subunit B [Beutenbergia cavernae DSM 12333]
gi|229565711|gb|ACQ79562.1| ATP synthase F0, B subunit [Beutenbergia cavernae DSM 12333]
Length=200
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/155 (34%), Positives = 86/155 (56%), Gaps = 8/155 (5%)
Query 15 AEEGGES-SNFLIPNGTFFVVLAIFLVVLAVIGTFV----VPPILKVLRERDAMVAKTLA 69
A+EGGES N IP ++ +V + LVV +I FV +P + +L ER A + L
Sbjct 10 AQEGGESEQNLFIP-ASYDIVWS--LVVTVIIAFFVYRYLMPKMTAILDERSAKIEGGLE 66
Query 70 DNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTA 129
K + A+ + + + EAR +A+ +R+ A+ DG ++ +AR RA+ + +++A
Sbjct 67 HAAKVQAEADKAREEQEAVLAEARGEAARIREEAQGDGAAIVAEARGRAQAEANRIVESA 126
Query 130 HEQLKRERDAVELDLRAHVGTMSATLASRILGVDL 164
Q+ ER + LR+ VGT++ LASRI+G L
Sbjct 127 QRQIDAERQQAVVSLRSEVGTLATELASRIVGESL 161
>gi|184200626|ref|YP_001854833.1| ATP synthase subunit b [Kocuria rhizophila DC2201]
gi|226741490|sp|B2GLY6.1|ATPF_KOCRD RecName: Full=ATP synthase subunit b; AltName: Full=ATP synthase
F(0) sector subunit b; AltName: Full=ATPase subunit I; AltName:
Full=F-type ATPase subunit b; Short=F-ATPase subunit
b
gi|183580856|dbj|BAG29327.1| ATP synthase subunit b [Kocuria rhizophila DC2201]
Length=178
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/147 (33%), Positives = 84/147 (58%), Gaps = 1/147 (0%)
Query 20 ESSNFLIPNGTFFVVLAIFLVVLAVIG-TFVVPPILKVLRERDAMVAKTLADNKKSDEQF 78
E +N LIP+ ++ I V+L I ++VP KV ++R + LA K + +
Sbjct 5 EEANPLIPDVWEMLITGIGFVILLFIAIKYIVPAFEKVFKDRADAIEGGLAKAKAAQAEA 64
Query 79 AAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLKRERD 138
AA+ +Y++ + AR++A +R+ AR++G K++ D + RA + A + AH+ ++ ER
Sbjct 65 KAARDEYNQQLESARLEAQKIREEARSEGEKILADFKDRANMESARITENAHKAIEAERA 124
Query 139 AVELDLRAHVGTMSATLASRILGVDLT 165
A + LR VGT++ LAS+I+G L
Sbjct 125 AAVVSLRDEVGTLATQLASKIVGESLN 151
>gi|310288112|ref|YP_003939371.1| ATP synthase subunit B [Bifidobacterium bifidum S17]
gi|313140778|ref|ZP_07802971.1| F0F1 ATP synthase subunit B [Bifidobacterium bifidum NCIMB 41171]
gi|309252049|gb|ADO53797.1| ATP synthase B chain [Bifidobacterium bifidum S17]
gi|313133288|gb|EFR50905.1| F0F1 ATP synthase subunit B [Bifidobacterium bifidum NCIMB 41171]
Length=176
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/143 (33%), Positives = 75/143 (53%), Gaps = 1/143 (0%)
Query 23 NFLIPNGTFFVVLAIFLVVLAVI-GTFVVPPILKVLRERDAMVAKTLADNKKSDEQFAAA 81
IP V I LV++A+ F +P + ER A + +A ++S + AA
Sbjct 11 KLFIPQVYDIVWSLIILVIVALFFHKFFMPKFNAIFDERAAKIEGNIAKAEQSKKDADAA 70
Query 82 QADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLKRERDAVE 141
++ Y+ ++ ARV+AS +RD+ARA+ +I DAR RAE A A ++ ++
Sbjct 71 KSKYEAQLSTARVEASKIRDDARAEASHIIADARSRAESDAAQITANAQRSIESQQQQAL 130
Query 142 LDLRAHVGTMSATLASRILGVDL 164
+ L+ VGT++ LA +ILG L
Sbjct 131 VSLKGEVGTLATALAGKILGAKL 153
>gi|311064985|ref|YP_003971711.1| ATP synthase subunit B [Bifidobacterium bifidum PRL2010]
gi|310867305|gb|ADP36674.1| AtpF ATP synthase B chain [Bifidobacterium bifidum PRL2010]
Length=175
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/143 (33%), Positives = 75/143 (53%), Gaps = 1/143 (0%)
Query 23 NFLIPNGTFFVVLAIFLVVLAVI-GTFVVPPILKVLRERDAMVAKTLADNKKSDEQFAAA 81
IP V I LV++A+ F +P + ER A + +A ++S + AA
Sbjct 10 KLFIPQVYDIVWSLIILVIVALFFHKFFMPKFNAIFDERAAKIEGNIAKAEQSKKDADAA 69
Query 82 QADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLKRERDAVE 141
++ Y+ ++ ARV+AS +RD+ARA+ +I DAR RAE A A ++ ++
Sbjct 70 KSKYEAQLSTARVEASKIRDDARAEASHIIADARSRAESDAAQITANAQRSIESQQQQAL 129
Query 142 LDLRAHVGTMSATLASRILGVDL 164
+ L+ VGT++ LA +ILG L
Sbjct 130 VSLKGEVGTLATALAGKILGAKL 152
>gi|212715315|ref|ZP_03323443.1| hypothetical protein BIFCAT_00208 [Bifidobacterium catenulatum
DSM 16992]
gi|212661772|gb|EEB22347.1| hypothetical protein BIFCAT_00208 [Bifidobacterium catenulatum
DSM 16992]
Length=173
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/141 (32%), Positives = 72/141 (52%), Gaps = 0/141 (0%)
Query 24 FLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRERDAMVAKTLADNKKSDEQFAAAQA 83
FL + F L I ++V F +P V ER A + +A +++ + A+A
Sbjct 11 FLPKSYDIFWSLVILIIVAVFFYKFFLPKFQAVFDERAAKIEGGIAKAEQAQKDADEAKA 70
Query 84 DYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLKRERDAVELD 143
Y+ +++ARV AS +RD+AR + +I DAR RAE A TA ++ ++ +
Sbjct 71 KYEAQLSKARVDASKIRDDARTEASHIIADARTRAESDAAQITATAQRSIESQQQQALVS 130
Query 144 LRAHVGTMSATLASRILGVDL 164
L+ VG ++ LA +ILG L
Sbjct 131 LKGEVGVLATALAGKILGSKL 151
>gi|227501701|ref|ZP_03931750.1| F0F1 ATP synthase subunit B [Corynebacterium accolens ATCC 49725]
gi|306835878|ref|ZP_07468873.1| ATP synthase F0 sector subunit B [Corynebacterium accolens ATCC
49726]
gi|227077726|gb|EEI15689.1| F0F1 ATP synthase subunit B [Corynebacterium accolens ATCC 49725]
gi|304568243|gb|EFM43813.1| ATP synthase F0 sector subunit B [Corynebacterium accolens ATCC
49726]
Length=189
Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/159 (31%), Positives = 84/159 (53%), Gaps = 1/159 (0%)
Query 8 VLAASQAAEEGGESSNFLIP-NGTFFVVLAIFLVVLAVIGTFVVPPILKVLRERDAMVAK 66
+LAA G S + L+P N F L F+V+L + FV+P K+L ER+ +
Sbjct 7 MLAAEGEENPGSGSFSVLLPKNYDIFWSLLCFIVILWLFWKFVLPRYTKLLEEREDRIEG 66
Query 67 TLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTL 126
+ + + AA Y+ + +AR +A+ +R+ AR G+++ DA+ +AE++ +
Sbjct 67 GMKRAEAQQAEAKAALEKYNAQLADARAEAAEIREQARERGKQIEADAKSQAEEESRRIV 126
Query 127 QTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLT 165
+QL+ R V +LR+ +G S LA +ILG +L+
Sbjct 127 ANGEKQLEASRAQVVTELRSEMGQNSINLAEKILGGELS 165
>gi|296128922|ref|YP_003636172.1| ATP synthase F0, B subunit [Cellulomonas flavigena DSM 20109]
gi|296020737|gb|ADG73973.1| ATP synthase F0, B subunit [Cellulomonas flavigena DSM 20109]
Length=193
Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/146 (34%), Positives = 83/146 (57%), Gaps = 1/146 (0%)
Query 20 ESSNFLIPNGTFFVVLAIFLVVLAV-IGTFVVPPILKVLRERDAMVAKTLADNKKSDEQF 78
E L+P G + AI LV +A+ FV+P VL ER A + +A + + +
Sbjct 19 EGIRLLVPAGYDLLWSAIVLVGIAIPFYKFVLPKFQAVLDERTAKIEGGIAKAESAQAEA 78
Query 79 AAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLKRERD 138
AA A+Y + + +AR +A+ +R++AR + +++ +AR RA+++ A +TA Q+ ER
Sbjct 79 AAQLAEYQQLLADARSEAARIREDARTEAGQIVAEARTRAQEEAARIAETAQRQIDAERQ 138
Query 139 AVELDLRAHVGTMSATLASRILGVDL 164
+ LR VGT++ LAS+I+G L
Sbjct 139 QAAVSLRTDVGTLATQLASKIVGESL 164
>gi|296268881|ref|YP_003651513.1| ATP synthase F0 subunit B [Thermobispora bispora DSM 43833]
gi|296091668|gb|ADG87620.1| ATP synthase F0, B subunit [Thermobispora bispora DSM 43833]
Length=181
Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/169 (35%), Positives = 86/169 (51%), Gaps = 10/169 (5%)
Query 7 IVLAASQAAEEGGESSNFLIPNGTFFVVLAI-FLVVLAVIGTFVVPPILKVLRERDAMVA 65
+ LAA+ A EG +N L+P+ VV + FLVV V+G + P I K L ER +
Sbjct 1 MTLAATPLAAEG---ANPLLPHAYELVVGSFAFLVVFLVVGKILTPRIQKTLAERTEAIE 57
Query 66 KTLADNKKSDEQFAAAQ---ADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQQV 122
+ K++ E A AQ Y + EAR +A+ LR+ AR G ++ + R AE +
Sbjct 58 GGI---KRAQELQAEAQRTLEQYRAQLAEARHEAARLREEAREQGARIKAELRQEAEAEA 114
Query 123 ASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLTASAATR 171
++ A Q++ ER + LR +G +S LASRI+G L A R
Sbjct 115 RRIIEAAQAQIEAERRQALIQLRGEIGRLSVELASRIVGESLEDEARQR 163
>gi|109900597|ref|YP_663852.1| F0F1 ATP synthase subunit B [Pseudoalteromonas atlantica T6c]
gi|123360113|sp|Q15MU0.1|ATPF2_PSEA6 RecName: Full=ATP synthase subunit b 2; AltName: Full=ATP synthase
F(0) sector subunit b 2; AltName: Full=ATPase subunit
I 2; AltName: Full=F-type ATPase subunit b 2; Short=F-ATPase
subunit b 2
gi|109702878|gb|ABG42798.1| ATP synthase F0 subcomplex B subunit [Pseudoalteromonas atlantica
T6c]
Length=156
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/143 (29%), Positives = 75/143 (53%), Gaps = 0/143 (0%)
Query 28 NGTFFVVLAIFLVVLAVIGTFVVPPILKVLRERDAMVAKTLADNKKSDEQFAAAQADYDE 87
N T F L F+ + FV PPI+ + ER +A LA +++ ++ AQA E
Sbjct 4 NATLFGELLAFIFFVWFCMKFVWPPIMGAIEERQKKIADGLAASERGEKDLELAQAKATE 63
Query 88 AMTEARVQASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLKRERDAVELDLRAH 147
+ EA+ QA+ + + A+ G +++++ RA Q+ + + H +++ ER+ + DLR
Sbjct 64 QLKEAKTQAAGIIEQAKKRGSQIVDEETQRAHQERENIIAQGHAEIEAERNRAKEDLRKQ 123
Query 148 VGTMSATLASRILGVDLTASAAT 170
V ++ A RIL + A+A +
Sbjct 124 VAALAVAGAERILERQIDAAAQS 146
Lambda K H
0.316 0.128 0.330
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 136720389372
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40