BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1312
Length=147
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608452|ref|NP_215828.1| hypothetical protein Rv1312 [Mycoba... 288 2e-76
gi|254550320|ref|ZP_05140767.1| hypothetical secreted protein [M... 280 5e-74
gi|31792505|ref|NP_854998.1| hypothetical protein Mb1344 [Mycoba... 278 3e-73
gi|333989951|ref|YP_004522565.1| hypothetical protein JDM601_131... 249 1e-64
gi|15827578|ref|NP_301841.1| hypothetical protein ML1147 [Mycoba... 241 4e-62
gi|118619156|ref|YP_907488.1| hypothetical protein MUL_3952 [Myc... 229 7e-59
gi|296170253|ref|ZP_06851846.1| conserved hypothetical protein [... 228 2e-58
gi|41408547|ref|NP_961383.1| hypothetical protein MAP2449c [Myco... 226 6e-58
gi|254821311|ref|ZP_05226312.1| hypothetical protein MintA_15337... 224 4e-57
gi|289569324|ref|ZP_06449551.1| conserved secreted protein [Myco... 222 2e-56
gi|342858027|ref|ZP_08714683.1| hypothetical protein MCOL_04095 ... 221 2e-56
gi|118465322|ref|YP_880768.1| hypothetical protein MAV_1530 [Myc... 218 2e-55
gi|254774351|ref|ZP_05215867.1| hypothetical protein MaviaA2_067... 217 4e-55
gi|108800838|ref|YP_641035.1| hypothetical protein Mmcs_3874 [My... 216 9e-55
gi|240169502|ref|ZP_04748161.1| hypothetical protein MkanA1_0932... 209 9e-53
gi|118468457|ref|YP_889186.1| hypothetical protein MSMEG_4933 [M... 204 3e-51
gi|315443373|ref|YP_004076252.1| hypothetical protein Mspyr1_175... 189 1e-46
gi|120405280|ref|YP_955109.1| hypothetical protein Mvan_4326 [My... 185 2e-45
gi|145222908|ref|YP_001133586.1| hypothetical protein Mflv_2320 ... 185 2e-45
gi|169628546|ref|YP_001702195.1| hypothetical protein MAB_1455 [... 172 1e-41
gi|289749869|ref|ZP_06509247.1| conserved secreted protein [Myco... 170 5e-41
gi|312139180|ref|YP_004006516.1| hypothetical protein REQ_17630 ... 150 5e-35
gi|226360594|ref|YP_002778372.1| hypothetical protein ROP_11800 ... 149 1e-34
gi|111018471|ref|YP_701443.1| hypothetical protein RHA1_ro01470 ... 149 2e-34
gi|54023034|ref|YP_117276.1| hypothetical protein nfa10670 [Noca... 140 8e-32
gi|226307390|ref|YP_002767350.1| hypothetical protein RER_39030 ... 136 1e-30
gi|296138984|ref|YP_003646227.1| hypothetical protein Tpau_1257 ... 109 1e-22
gi|343928073|ref|ZP_08767538.1| hypothetical protein GOALK_100_0... 100 7e-20
gi|333920912|ref|YP_004494493.1| hypothetical protein AS9A_3249 ... 96.3 2e-18
gi|326382096|ref|ZP_08203789.1| hypothetical protein SCNU_04092 ... 95.5 2e-18
gi|262201862|ref|YP_003273070.1| hypothetical protein Gbro_1923 ... 94.0 6e-18
gi|260577551|ref|ZP_05845490.1| conserved hypothetical protein [... 90.1 1e-16
gi|19552437|ref|NP_600439.1| hypothetical protein NCgl1167 [Cory... 89.7 1e-16
gi|68536418|ref|YP_251123.1| hypothetical protein jk1333 [Coryne... 89.4 2e-16
gi|25027873|ref|NP_737927.1| hypothetical protein CE1317 [Coryne... 87.4 7e-16
gi|227503871|ref|ZP_03933920.1| conserved hypothetical protein [... 87.0 9e-16
gi|336325965|ref|YP_004605931.1| hypothetical protein CRES_1412 ... 85.9 2e-15
gi|225022776|ref|ZP_03711968.1| hypothetical protein CORMATOL_02... 85.1 3e-15
gi|305681876|ref|ZP_07404680.1| conserved hypothetical protein [... 84.3 6e-15
gi|296119534|ref|ZP_06838092.1| conserved hypothetical protein [... 84.0 6e-15
gi|300781406|ref|ZP_07091260.1| conserved hypothetical protein [... 84.0 8e-15
gi|256380127|ref|YP_003103787.1| hypothetical protein Amir_6134 ... 83.2 1e-14
gi|291454174|ref|ZP_06593564.1| conserved hypothetical protein [... 82.4 2e-14
gi|340794784|ref|YP_004760247.1| hypothetical protein CVAR_1822 ... 82.0 2e-14
gi|254382330|ref|ZP_04997690.1| secreted protein [Streptomyces s... 80.9 6e-14
gi|302536958|ref|ZP_07289300.1| secreted protein [Streptomyces s... 79.7 1e-13
gi|227548014|ref|ZP_03978063.1| conserved hypothetical protein [... 79.3 2e-13
gi|302558366|ref|ZP_07310708.1| secreted/membrane protein [Strep... 78.6 3e-13
gi|227832902|ref|YP_002834609.1| hypothetical protein cauri_1076... 77.8 5e-13
gi|297202405|ref|ZP_06919802.1| secreted protein [Streptomyces s... 77.0 8e-13
>gi|15608452|ref|NP_215828.1| hypothetical protein Rv1312 [Mycobacterium tuberculosis H37Rv]
gi|15840763|ref|NP_335800.1| hypothetical protein MT1352 [Mycobacterium tuberculosis CDC1551]
gi|148661100|ref|YP_001282623.1| hypothetical protein MRA_1320 [Mycobacterium tuberculosis H37Ra]
43 more sequence titles
Length=147
Score = 288 bits (738), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/147 (100%), Positives = 147/147 (100%), Gaps = 0/147 (0%)
Query 1 MSAPMIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE 60
MSAPMIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE
Sbjct 1 MSAPMIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE 60
Query 61 AAFYRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEI 120
AAFYRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEI
Sbjct 61 AAFYRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEI 120
Query 121 ALDRGALTAFLSWLESRPSPRARRRSM 147
ALDRGALTAFLSWLESRPSPRARRRSM
Sbjct 121 ALDRGALTAFLSWLESRPSPRARRRSM 147
>gi|254550320|ref|ZP_05140767.1| hypothetical secreted protein [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|294994868|ref|ZP_06800559.1| hypothetical secreted protein [Mycobacterium tuberculosis 210]
gi|297633864|ref|ZP_06951644.1| hypothetical secreted protein [Mycobacterium tuberculosis KZN
4207]
24 more sequence titles
Length=143
Score = 280 bits (716), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 143/143 (100%), Positives = 143/143 (100%), Gaps = 0/143 (0%)
Query 5 MIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFY 64
MIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFY
Sbjct 1 MIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFY 60
Query 65 RLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDR 124
RLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDR
Sbjct 61 RLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDR 120
Query 125 GALTAFLSWLESRPSPRARRRSM 147
GALTAFLSWLESRPSPRARRRSM
Sbjct 121 GALTAFLSWLESRPSPRARRRSM 143
>gi|31792505|ref|NP_854998.1| hypothetical protein Mb1344 [Mycobacterium bovis AF2122/97]
gi|121637241|ref|YP_977464.1| hypothetical protein BCG_1372 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224989716|ref|YP_002644403.1| hypothetical secreted protein [Mycobacterium bovis BCG str. Tokyo
172]
gi|31618094|emb|CAD94205.1| CONSERVED HYPOTHETICAL SECRETED PROTEIN [Mycobacterium bovis
AF2122/97]
gi|121492888|emb|CAL71359.1| Conserved hypothetical secreted protein [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224772829|dbj|BAH25635.1| hypothetical secreted protein [Mycobacterium bovis BCG str. Tokyo
172]
gi|341601259|emb|CCC63932.1| conserved hypothetical secreted protein [Mycobacterium bovis
BCG str. Moreau RDJ]
Length=144
Score = 278 bits (710), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 141/142 (99%), Positives = 141/142 (99%), Gaps = 0/142 (0%)
Query 1 MSAPMIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE 60
MS PMIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE
Sbjct 1 MSVPMIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE 60
Query 61 AAFYRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEI 120
AAFYRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEI
Sbjct 61 AAFYRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEI 120
Query 121 ALDRGALTAFLSWLESRPSPRA 142
ALDRGALTAFLSWLESRPSPRA
Sbjct 121 ALDRGALTAFLSWLESRPSPRA 142
>gi|333989951|ref|YP_004522565.1| hypothetical protein JDM601_1311 [Mycobacterium sp. JDM601]
gi|333485919|gb|AEF35311.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=147
Score = 249 bits (636), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/146 (85%), Positives = 136/146 (94%), Gaps = 0/146 (0%)
Query 1 MSAPMIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE 60
MS P++ M VLV VL AVLALSYRLWKLRQGGTA IMRD+PAVGGHGWRHGV+RYRGGE
Sbjct 1 MSTPIVCMAVLVAVLFGAVLALSYRLWKLRQGGTAAIMRDLPAVGGHGWRHGVVRYRGGE 60
Query 61 AAFYRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEI 120
AAFYRLSS+RLWPDRRLSRRGV+++SRRAPRGDEFDIMTDEIVV+EL D+TQDRRVG+EI
Sbjct 61 AAFYRLSSVRLWPDRRLSRRGVDVVSRRAPRGDEFDIMTDEIVVLELRDTTQDRRVGFEI 120
Query 121 ALDRGALTAFLSWLESRPSPRARRRS 146
ALDRGA TAFLSWLE+RPSPR+RR S
Sbjct 121 ALDRGARTAFLSWLEARPSPRSRRHS 146
>gi|15827578|ref|NP_301841.1| hypothetical protein ML1147 [Mycobacterium leprae TN]
gi|221230055|ref|YP_002503471.1| putative secreted protein [Mycobacterium leprae Br4923]
gi|1722962|sp|P53432.1|Y1147_MYCLE RecName: Full=Uncharacterized protein ML1147
gi|699328|gb|AAA63089.1| u471b [Mycobacterium leprae]
gi|13093128|emb|CAC31528.1| possible secreted protein [Mycobacterium leprae]
gi|219933162|emb|CAR71242.1| possible secreted protein [Mycobacterium leprae Br4923]
Length=147
Score = 241 bits (614), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 120/135 (89%), Positives = 127/135 (95%), Gaps = 0/135 (0%)
Query 1 MSAPMIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE 60
MSAPM+GMVVLVV LG AVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRG
Sbjct 1 MSAPMVGMVVLVVTLGAAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGEA 60
Query 61 AAFYRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEI 120
AAFYRLSSLRLWPDRRLSRRGVEI++RR PRGDEFDIMTD+IVV+EL D+TQDRR GYEI
Sbjct 61 AAFYRLSSLRLWPDRRLSRRGVEIVARRGPRGDEFDIMTDKIVVLELRDTTQDRRSGYEI 120
Query 121 ALDRGALTAFLSWLE 135
ALD+GAL AFLSWLE
Sbjct 121 ALDQGALAAFLSWLE 135
>gi|118619156|ref|YP_907488.1| hypothetical protein MUL_3952 [Mycobacterium ulcerans Agy99]
gi|183984056|ref|YP_001852347.1| hypothetical protein MMAR_4085 [Mycobacterium marinum M]
gi|118571266|gb|ABL06017.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
gi|183177382|gb|ACC42492.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=147
Score = 229 bits (585), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 129/146 (89%), Positives = 141/146 (97%), Gaps = 0/146 (0%)
Query 1 MSAPMIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE 60
MSAPM+GMVVLVV+LG+AVLALSYRLWKLRQGGTAGIMRDIPA+GGHGWRHGVIRYRGGE
Sbjct 1 MSAPMVGMVVLVVLLGMAVLALSYRLWKLRQGGTAGIMRDIPAIGGHGWRHGVIRYRGGE 60
Query 61 AAFYRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEI 120
A FYRLSSLRLWPDRRLSRRGVEII+RR PRGDE+DIMTD+IVV+EL DSTQDRR G E+
Sbjct 61 ARFYRLSSLRLWPDRRLSRRGVEIIARRGPRGDEYDIMTDKIVVLELRDSTQDRRPGSEL 120
Query 121 ALDRGALTAFLSWLESRPSPRARRRS 146
ALD+GALTAFLSWLESRPSPRA++RS
Sbjct 121 ALDQGALTAFLSWLESRPSPRAQKRS 146
>gi|296170253|ref|ZP_06851846.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895129|gb|EFG74847.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=147
Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/135 (93%), Positives = 130/135 (97%), Gaps = 0/135 (0%)
Query 1 MSAPMIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE 60
MSAPM GMVVLVVVL AV+ALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE
Sbjct 1 MSAPMTGMVVLVVVLAGAVVALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE 60
Query 61 AAFYRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEI 120
AAFYRLSSLRLWPDRRLSRRGVEI++RRAPRGDEFDIMTDEIVVVEL D+TQDRR GYEI
Sbjct 61 AAFYRLSSLRLWPDRRLSRRGVEIVARRAPRGDEFDIMTDEIVVVELRDTTQDRRTGYEI 120
Query 121 ALDRGALTAFLSWLE 135
ALD+GALTAFLSWLE
Sbjct 121 ALDKGALTAFLSWLE 135
>gi|41408547|ref|NP_961383.1| hypothetical protein MAP2449c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396905|gb|AAS04766.1| hypothetical protein MAP_2449c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336460897|gb|EGO39780.1| Protein of unknown function (DUF2550) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=147
Score = 226 bits (577), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 124/135 (92%), Positives = 129/135 (96%), Gaps = 0/135 (0%)
Query 1 MSAPMIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE 60
MSAPM GMVVLVVVL AV+ALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE
Sbjct 1 MSAPMAGMVVLVVVLAAAVIALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE 60
Query 61 AAFYRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEI 120
AAFYRLSSLRLWPDRRLSRRGVEI+SRRAPRGDEFDIMTDEIVV+EL D+TQDRR GYEI
Sbjct 61 AAFYRLSSLRLWPDRRLSRRGVEIVSRRAPRGDEFDIMTDEIVVIELRDTTQDRRSGYEI 120
Query 121 ALDRGALTAFLSWLE 135
A D+GALTAFLSWLE
Sbjct 121 AFDKGALTAFLSWLE 135
>gi|254821311|ref|ZP_05226312.1| hypothetical protein MintA_15337 [Mycobacterium intracellulare
ATCC 13950]
Length=147
Score = 224 bits (570), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 121/135 (90%), Positives = 128/135 (95%), Gaps = 0/135 (0%)
Query 1 MSAPMIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE 60
MSAPM MVVLVVVL AV+ALSYRLWKLRQGGTAGIMRD+PAVGGHGWRHGVIRYRGGE
Sbjct 1 MSAPMTAMVVLVVVLAAAVVALSYRLWKLRQGGTAGIMRDVPAVGGHGWRHGVIRYRGGE 60
Query 61 AAFYRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEI 120
AAFYRLSSLRLWPDRRLSRRGVEI++RRAPRGDEFDIMTDEIVV+EL D+TQDRR GYEI
Sbjct 61 AAFYRLSSLRLWPDRRLSRRGVEIVARRAPRGDEFDIMTDEIVVIELRDTTQDRRSGYEI 120
Query 121 ALDRGALTAFLSWLE 135
A D+GALTAFLSWLE
Sbjct 121 AFDKGALTAFLSWLE 135
>gi|289569324|ref|ZP_06449551.1| conserved secreted protein [Mycobacterium tuberculosis T17]
gi|289543078|gb|EFD46726.1| conserved secreted protein [Mycobacterium tuberculosis T17]
Length=147
Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/135 (91%), Positives = 123/135 (92%), Gaps = 0/135 (0%)
Query 1 MSAPMIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE 60
MSAPMIGMVVLVVVLGLA + GGTAGIMRDIPAVGGHGWRHGVIRYRGGE
Sbjct 1 MSAPMIGMVVLVVVLGLARSRTELSSVEAAPGGTAGIMRDIPAVGGHGWRHGVIRYRGGE 60
Query 61 AAFYRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEI 120
AAFYRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEI
Sbjct 61 AAFYRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEI 120
Query 121 ALDRGALTAFLSWLE 135
ALDRGALTAFLSWLE
Sbjct 121 ALDRGALTAFLSWLE 135
>gi|342858027|ref|ZP_08714683.1| hypothetical protein MCOL_04095 [Mycobacterium colombiense CECT
3035]
gi|342135360|gb|EGT88526.1| hypothetical protein MCOL_04095 [Mycobacterium colombiense CECT
3035]
Length=147
Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/135 (92%), Positives = 129/135 (96%), Gaps = 0/135 (0%)
Query 1 MSAPMIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE 60
MSAPM+GMVVLVVVL AV+ LSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE
Sbjct 1 MSAPMVGMVVLVVVLASAVVGLSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE 60
Query 61 AAFYRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEI 120
AAFYRLSSLRLWPDRRLSRRGVEI+SRRAPRGDEFDIMTDEIVV+EL D+TQDRR GYEI
Sbjct 61 AAFYRLSSLRLWPDRRLSRRGVEIVSRRAPRGDEFDIMTDEIVVIELRDTTQDRRSGYEI 120
Query 121 ALDRGALTAFLSWLE 135
A D+GALTAFLSWLE
Sbjct 121 AFDKGALTAFLSWLE 135
>gi|118465322|ref|YP_880768.1| hypothetical protein MAV_1530 [Mycobacterium avium 104]
gi|118166609|gb|ABK67506.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=143
Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/131 (92%), Positives = 125/131 (96%), Gaps = 0/131 (0%)
Query 5 MIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFY 64
M GMVVLVVVL AV+ALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFY
Sbjct 1 MAGMVVLVVVLAAAVIALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFY 60
Query 65 RLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDR 124
RLSSLRLWPDRRLSRRGVEI+SRRAPRGDEFDIMTDEIVV+EL D+TQDRR GYEIA D+
Sbjct 61 RLSSLRLWPDRRLSRRGVEIVSRRAPRGDEFDIMTDEIVVIELRDTTQDRRSGYEIAFDK 120
Query 125 GALTAFLSWLE 135
GALTAFLSWLE
Sbjct 121 GALTAFLSWLE 131
>gi|254774351|ref|ZP_05215867.1| hypothetical protein MaviaA2_06740 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=140
Score = 217 bits (553), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 106/113 (94%), Positives = 110/113 (98%), Gaps = 0/113 (0%)
Query 23 SYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRLSSLRLWPDRRLSRRGV 82
SYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRLSSLRLWPDRRLSRRGV
Sbjct 16 SYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRLSSLRLWPDRRLSRRGV 75
Query 83 EIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDRGALTAFLSWLE 135
EI+SRRAPRGDEFDIMTDEIVV+EL D+TQDRR GYEIA D+GALTAFLSWLE
Sbjct 76 EIVSRRAPRGDEFDIMTDEIVVIELRDTTQDRRSGYEIAFDKGALTAFLSWLE 128
>gi|108800838|ref|YP_641035.1| hypothetical protein Mmcs_3874 [Mycobacterium sp. MCS]
gi|119869978|ref|YP_939930.1| hypothetical protein Mkms_3948 [Mycobacterium sp. KMS]
gi|126436436|ref|YP_001072127.1| hypothetical protein Mjls_3860 [Mycobacterium sp. JLS]
gi|108771257|gb|ABG09979.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119696067|gb|ABL93140.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126236236|gb|ABN99636.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=148
Score = 216 bits (550), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 109/136 (81%), Positives = 123/136 (91%), Gaps = 1/136 (0%)
Query 1 MSAPMIGMVVLVVVLGLAVLALSYRLWKLRQ-GGTAGIMRDIPAVGGHGWRHGVIRYRGG 59
MSAPM MV L+ VL L V+AL+YRLWKLRQ GGTA I+RD+PAVGGHGWRHGV+RYRGG
Sbjct 1 MSAPMWSMVALIGVLLLVVIALTYRLWKLRQVGGTAAILRDVPAVGGHGWRHGVVRYRGG 60
Query 60 EAAFYRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYE 119
EA+FYRLSSLR WPDRRLSRRG+EI+SRR+PRGDEFDIMT EIVV+EL D++ +RR GYE
Sbjct 61 EASFYRLSSLRWWPDRRLSRRGLEIVSRRSPRGDEFDIMTHEIVVLELRDTSPERRRGYE 120
Query 120 IALDRGALTAFLSWLE 135
IALDRGALTAFLSWLE
Sbjct 121 IALDRGALTAFLSWLE 136
>gi|240169502|ref|ZP_04748161.1| hypothetical protein MkanA1_09326 [Mycobacterium kansasii ATCC
12478]
Length=143
Score = 209 bits (533), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 102/113 (91%), Positives = 109/113 (97%), Gaps = 0/113 (0%)
Query 23 SYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRLSSLRLWPDRRLSRRGV 82
SYRLWKLR+GGTAGIMRDIPAVGGHGW HGVIRYRG EAAFYRLSSLRLWPDRRLSRRGV
Sbjct 19 SYRLWKLRRGGTAGIMRDIPAVGGHGWHHGVIRYRGAEAAFYRLSSLRLWPDRRLSRRGV 78
Query 83 EIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDRGALTAFLSWLE 135
EI++RRAPRGDEFDIMT+EIVV+EL D+TQDRR GYEIALD+GALTAFLSWLE
Sbjct 79 EIVARRAPRGDEFDIMTNEIVVLELRDATQDRRSGYEIALDKGALTAFLSWLE 131
>gi|118468457|ref|YP_889186.1| hypothetical protein MSMEG_4933 [Mycobacterium smegmatis str.
MC2 155]
gi|118169744|gb|ABK70640.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=144
Score = 204 bits (520), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/132 (76%), Positives = 118/132 (90%), Gaps = 1/132 (0%)
Query 5 MIGMVVLVVVLGLAVLALSYRLWKLRQ-GGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAF 63
MIGMV L+ VL + V+AL YRLWKLRQ GGTA I+RD PAVGGHGWRHGV+RYRGGEA F
Sbjct 1 MIGMVALIAVLLVLVIALCYRLWKLRQVGGTAAILRDYPAVGGHGWRHGVMRYRGGEAGF 60
Query 64 YRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALD 123
YRLSS+R WPDRRLSRRG+E++SRR+PRGDE+DIMTD+IV++EL D++ +R+ GYEIALD
Sbjct 61 YRLSSIRWWPDRRLSRRGLEVVSRRSPRGDEYDIMTDQIVILELRDTSPERKRGYEIALD 120
Query 124 RGALTAFLSWLE 135
RGALTAF SWLE
Sbjct 121 RGALTAFTSWLE 132
>gi|315443373|ref|YP_004076252.1| hypothetical protein Mspyr1_17520 [Mycobacterium sp. Spyr1]
gi|315261676|gb|ADT98417.1| Protein of unknown function (DUF2550) [Mycobacterium sp. Spyr1]
Length=148
Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/136 (78%), Positives = 117/136 (87%), Gaps = 1/136 (0%)
Query 1 MSAPMIGMVVLVVVLGLAVLALSYRLWKLRQ-GGTAGIMRDIPAVGGHGWRHGVIRYRGG 59
MSA M+ MV LV VL L V+AL YRLWKLRQ GGTA I+RD+PAVGGHGWRHGV+RYRGG
Sbjct 1 MSASMLFMVALVCVLLLVVVALFYRLWKLRQVGGTAAILRDMPAVGGHGWRHGVMRYRGG 60
Query 60 EAAFYRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYE 119
EA FYRLSS R WPDR LSRRGVE++SRRAPRGDEFDIMT+EIVV+EL D+ DR GYE
Sbjct 61 EAGFYRLSSFRWWPDRTLSRRGVEVVSRRAPRGDEFDIMTEEIVVLELRDTGPDRGRGYE 120
Query 120 IALDRGALTAFLSWLE 135
IALDRGALTAF SW+E
Sbjct 121 IALDRGALTAFTSWME 136
>gi|120405280|ref|YP_955109.1| hypothetical protein Mvan_4326 [Mycobacterium vanbaalenii PYR-1]
gi|119958098|gb|ABM15103.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=141
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/114 (81%), Positives = 102/114 (90%), Gaps = 1/114 (0%)
Query 23 SYRLWKLRQ-GGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRLSSLRLWPDRRLSRRG 81
SYRLWKLRQ GGTA I+RD+PAV GHGWRHGV+RYRGGEA FYRLSSLR WPDR L+RRG
Sbjct 16 SYRLWKLRQVGGTAAILRDVPAVAGHGWRHGVMRYRGGEAGFYRLSSLRWWPDRTLTRRG 75
Query 82 VEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDRGALTAFLSWLE 135
+E++SRRAPRGDEFDIMTDEIVV+EL D+ +R GYEIALDRGALTAF SWLE
Sbjct 76 LEVVSRRAPRGDEFDIMTDEIVVLELRDTGPERGRGYEIALDRGALTAFTSWLE 129
>gi|145222908|ref|YP_001133586.1| hypothetical protein Mflv_2320 [Mycobacterium gilvum PYR-GCK]
gi|145215394|gb|ABP44798.1| hypothetical protein Mflv_2320 [Mycobacterium gilvum PYR-GCK]
Length=141
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/113 (82%), Positives = 101/113 (90%), Gaps = 1/113 (0%)
Query 24 YRLWKLRQ-GGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRLSSLRLWPDRRLSRRGV 82
YRLWKLRQ GGTA I+RD+PAVGGHGWRHGV+RYRGGEA FYRLSS R WPDR LSRRGV
Sbjct 17 YRLWKLRQVGGTAAILRDMPAVGGHGWRHGVMRYRGGEAGFYRLSSFRWWPDRTLSRRGV 76
Query 83 EIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDRGALTAFLSWLE 135
E++SRRAPRGDEFDIMT+EIVV+EL D+ DR GYEIALDRGALTAF SW+E
Sbjct 77 EVVSRRAPRGDEFDIMTEEIVVLELRDTGPDRGRGYEIALDRGALTAFTSWME 129
>gi|169628546|ref|YP_001702195.1| hypothetical protein MAB_1455 [Mycobacterium abscessus ATCC 19977]
gi|169240513|emb|CAM61541.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=138
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/124 (70%), Positives = 103/124 (84%), Gaps = 4/124 (3%)
Query 23 SYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRLSSLRLWPDRRLSRRGV 82
S+RL KLR GGTA ++RD+P VG WRHGV+RYR +A FYRLSS+RLWPDR+LSRR +
Sbjct 18 SFRLLKLRNGGTAALLRDMPEVGEGRWRHGVMRYRESQAEFYRLSSVRLWPDRQLSRRDL 77
Query 83 EIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDRGALTAFLSWLESRPSPRA 142
EII RR PRGDE+DIMT EIVV++L D +D YE+ALDRGALTAF+SW+ESRPSPRA
Sbjct 78 EIIDRRIPRGDEYDIMTAEIVVLQLRDGARD----YEMALDRGALTAFMSWVESRPSPRA 133
Query 143 RRRS 146
+RRS
Sbjct 134 QRRS 137
>gi|289749869|ref|ZP_06509247.1| conserved secreted protein [Mycobacterium tuberculosis T92]
gi|289690456|gb|EFD57885.1| conserved secreted protein [Mycobacterium tuberculosis T92]
Length=145
Score = 170 bits (431), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/88 (100%), Positives = 88/88 (100%), Gaps = 0/88 (0%)
Query 1 MSAPMIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE 60
MSAPMIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE
Sbjct 1 MSAPMIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE 60
Query 61 AAFYRLSSLRLWPDRRLSRRGVEIISRR 88
AAFYRLSSLRLWPDRRLSRRGVEIISRR
Sbjct 61 AAFYRLSSLRLWPDRRLSRRGVEIISRR 88
>gi|312139180|ref|YP_004006516.1| hypothetical protein REQ_17630 [Rhodococcus equi 103S]
gi|325673515|ref|ZP_08153206.1| hypothetical protein HMPREF0724_10988 [Rhodococcus equi ATCC
33707]
gi|311888519|emb|CBH47831.1| putative secreted protein [Rhodococcus equi 103S]
gi|325555536|gb|EGD25207.1| hypothetical protein HMPREF0724_10988 [Rhodococcus equi ATCC
33707]
Length=144
Score = 150 bits (380), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/126 (62%), Positives = 93/126 (74%), Gaps = 4/126 (3%)
Query 19 VLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRLSSLRLWPDRRLS 78
V A YRL LR+GGTA I+R PA GG GWRHGV+RY G F++LSSLR PD RLS
Sbjct 19 VAAFVYRLAVLRRGGTAAILRVTPAPGGSGWRHGVVRYGEGSLVFFKLSSLRPGPDSRLS 78
Query 79 RRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDRGALTAFLSWLESRP 138
R+G+E+ SRR P G+E+DIMTDEIV++E+ D YEIALDRGALTAFLSW+ESRP
Sbjct 79 RQGIEVGSRRGPVGNEYDIMTDEIVILEISDGDDT----YEIALDRGALTAFLSWVESRP 134
Query 139 SPRARR 144
R+ R
Sbjct 135 DGRSLR 140
>gi|226360594|ref|YP_002778372.1| hypothetical protein ROP_11800 [Rhodococcus opacus B4]
gi|226239079|dbj|BAH49427.1| hypothetical protein [Rhodococcus opacus B4]
Length=144
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/144 (55%), Positives = 101/144 (71%), Gaps = 4/144 (2%)
Query 1 MSAPMIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE 60
M+ M +++LVV+L V YRL LR+GGTA I+R PA G GWRHGVIRY G
Sbjct 1 MTIGMTVLIILVVLLAAFVAVFLYRLAVLRRGGTAAILRVTPAPGDTGWRHGVIRYGEGS 60
Query 61 AAFYRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEI 120
F++LSSLR PD R+ R+G+E+ RR+P G EFDIM++EI+++ S +DR YEI
Sbjct 61 LVFFKLSSLRPGPDSRIERQGIEVAGRRSPEGSEFDIMSEEIIIL----SVRDRGSSYEI 116
Query 121 ALDRGALTAFLSWLESRPSPRARR 144
ALD GALTAFLSW+ESRPS R+ R
Sbjct 117 ALDGGALTAFLSWVESRPSGRSVR 140
>gi|111018471|ref|YP_701443.1| hypothetical protein RHA1_ro01470 [Rhodococcus jostii RHA1]
gi|110818001|gb|ABG93285.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=140
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/140 (56%), Positives = 99/140 (71%), Gaps = 4/140 (2%)
Query 5 MIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFY 64
M +++LVV+L V YRL LR+GGTA I+R PA G GWRHGVIRY G F+
Sbjct 1 MTVLIILVVLLAAFVAVFLYRLAVLRRGGTAAILRVTPAPGDTGWRHGVIRYGEGSLVFF 60
Query 65 RLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDR 124
+LSSLR PD R+ R+G+E+ RR+P G EFDIM++EI+++ S +DR YEIALD
Sbjct 61 KLSSLRPGPDSRIDRQGIEVAGRRSPEGSEFDIMSEEIIIL----SVKDRGSSYEIALDG 116
Query 125 GALTAFLSWLESRPSPRARR 144
GALTAFLSW+ESRPS R+ R
Sbjct 117 GALTAFLSWVESRPSGRSVR 136
>gi|54023034|ref|YP_117276.1| hypothetical protein nfa10670 [Nocardia farcinica IFM 10152]
gi|54014542|dbj|BAD55912.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=140
Score = 140 bits (352), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 71/121 (59%), Positives = 90/121 (75%), Gaps = 4/121 (3%)
Query 24 YRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRLSSLRLWPDRRLSRRGVE 83
YRL +R+GGT+ I+R +PA GG GWRHG+IRY F++L+SL+L PD + RRG++
Sbjct 20 YRLVMIRRGGTSAILRVLPASGGQGWRHGLIRYDEDRLVFFKLTSLKLGPDAVIHRRGID 79
Query 84 IISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDRGALTAFLSWLESRPSPRAR 143
I +RR P GDE+DIMTDEI+V E+ DS YE+ALDRGA AFLSW+ESRPS RAR
Sbjct 80 IGNRRGPVGDEYDIMTDEIIVTEVSDSEGR----YELALDRGARAAFLSWVESRPSDRAR 135
Query 144 R 144
R
Sbjct 136 R 136
>gi|226307390|ref|YP_002767350.1| hypothetical protein RER_39030 [Rhodococcus erythropolis PR4]
gi|229489952|ref|ZP_04383805.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|226186507|dbj|BAH34611.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
gi|229323053|gb|EEN88821.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=144
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/115 (59%), Positives = 86/115 (75%), Gaps = 4/115 (3%)
Query 24 YRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRLSSLRLWPDRRLSRRGVE 83
YRL LR+GGTA ++R +P+ G GWRHG+IRY F++LSSLR PD R+ R+G+E
Sbjct 24 YRLLVLRRGGTAALLRVLPSPGDSGWRHGIIRYGESTFVFFKLSSLRPGPDSRIDRQGIE 83
Query 84 IISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDRGALTAFLSWLESRP 138
+ SRR+P G EFDIM+D+IVVV++ D + YEIALD GALTAFLSW+ESRP
Sbjct 84 VESRRSPSGTEFDIMSDDIVVVKVNDGSS----AYEIALDSGALTAFLSWVESRP 134
>gi|296138984|ref|YP_003646227.1| hypothetical protein Tpau_1257 [Tsukamurella paurometabola DSM
20162]
gi|296027118|gb|ADG77888.1| Protein of unknown function DUF2550 [Tsukamurella paurometabola
DSM 20162]
Length=144
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/144 (44%), Positives = 82/144 (57%), Gaps = 4/144 (2%)
Query 1 MSAPMIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGE 60
+ A + G VL++VL L+ RL+ LR G I+R +PA GWRHG +RY E
Sbjct 3 VGAVVFGAAVLILVLLAVGAVLALRLYSLRVAGVPIILRYLPAEPEQGWRHGTLRYDDHE 62
Query 61 AAFYRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEI 120
+YRLSS+RL P L R EI+ RRAP G E D++ ++V+V + E+
Sbjct 63 LKYYRLSSIRLGPSWTLPRGETEIVGRRAPSGTELDVIDPDMVIVHAVTPDGET----EL 118
Query 121 ALDRGALTAFLSWLESRPSPRARR 144
A R LTAF SWLESRPSPR R
Sbjct 119 AFARDGLTAFQSWLESRPSPRRNR 142
>gi|343928073|ref|ZP_08767538.1| hypothetical protein GOALK_100_00770 [Gordonia alkanivorans NBRC
16433]
gi|343762081|dbj|GAA14464.1| hypothetical protein GOALK_100_00770 [Gordonia alkanivorans NBRC
16433]
Length=162
Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/144 (39%), Positives = 85/144 (60%), Gaps = 16/144 (11%)
Query 17 LAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRLSSLRLWPDRR 76
+ + L+ RL +LR+ GT ++R IPA HGWRHG + Y +YRL+SLR P+
Sbjct 17 IVCVLLAVRLAQLRRVGTPILLRTIPAEVDHGWRHGTVHYSDDSLRYYRLASLRPGPNVT 76
Query 77 LSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRV---------------GYEIA 121
+R+G+EI RR P G E +I+ D +V++++ + + + GYE+A
Sbjct 77 FARQGIEIAGRRRPEGTEMEIL-DGMVILQVQTTGKTHTIGKGSDGAGSDGKVKDGYELA 135
Query 122 LDRGALTAFLSWLESRPSPRARRR 145
+ GA+TAF SWLESR S R++RR
Sbjct 136 MGPGAVTAFQSWLESRQSARSQRR 159
>gi|333920912|ref|YP_004494493.1| hypothetical protein AS9A_3249 [Amycolicicoccus subflavus DQS3-9A1]
gi|333483133|gb|AEF41693.1| hypothetical protein AS9A_3249 [Amycolicicoccus subflavus DQS3-9A1]
Length=146
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/111 (47%), Positives = 67/111 (61%), Gaps = 4/111 (3%)
Query 25 RLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRLSSLRLWPDRRLSRRGVEI 84
R+ +LR GGT+ ++R +P+ GWRHGVIRYR FYRLS L P RL+R+ EI
Sbjct 25 RIVELRSGGTSAVVRVLPSPKSEGWRHGVIRYRDESLDFYRLSRLIPGPSVRLNRQTAEI 84
Query 85 ISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDRGALTAFLSWLE 135
SRR P G E D+M + +V Q YE +RGALTAFL+W+E
Sbjct 85 ESRRRPDGGELDLMDSSVTIV----GVQAGGTHYEFGFERGALTAFLAWIE 131
>gi|326382096|ref|ZP_08203789.1| hypothetical protein SCNU_04092 [Gordonia neofelifaecis NRRL
B-59395]
gi|326199522|gb|EGD56703.1| hypothetical protein SCNU_04092 [Gordonia neofelifaecis NRRL
B-59395]
Length=151
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/129 (42%), Positives = 76/129 (59%), Gaps = 1/129 (0%)
Query 8 MVVLVVVLGLAVLA-LSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRL 66
+++ VVV G V A + YRL ++R+ GT ++R +PA GWRHG ++Y +YRL
Sbjct 9 IIIGVVVAGFFVAAGVVYRLVEVRRAGTPVLLRSLPADADEGWRHGSVQYGDDNLTYYRL 68
Query 67 SSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDRGA 126
SSLR P +SRR +EI+ RR P G E +IM D+ +VEL R YE+ +
Sbjct 69 SSLRPGPTVSMSRRRIEIVGRRRPVGTELEIMDDDFGIVELAIGRSGRGGRYELGMSPAV 128
Query 127 LTAFLSWLE 135
TAF SW+E
Sbjct 129 STAFQSWIE 137
>gi|262201862|ref|YP_003273070.1| hypothetical protein Gbro_1923 [Gordonia bronchialis DSM 43247]
gi|262085209|gb|ACY21177.1| Protein of unknown function DUF2550 [Gordonia bronchialis DSM
43247]
Length=154
Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/119 (44%), Positives = 72/119 (61%), Gaps = 8/119 (6%)
Query 24 YRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRLSSLRLWPDRRLSRRGVE 83
YRL +LR GT ++R++PA GWRHG + Y ++RLSSLR P R+G+E
Sbjct 24 YRLGQLRSAGTPVLLREVPAGADEGWRHGTVHYSDEALRYFRLSSLRPGPSATFCRQGIE 83
Query 84 IISRRAPRGDEFDIMTDEIVVVELCDSTQ----DRRVG---YEIALDRGALTAFLSWLE 135
I RR P G E DIM D +VV+++ ++ D + G YE+A+ GA+TAF SWLE
Sbjct 84 ITGRRDPVGTETDIM-DGLVVLQMREAVTAGRPDHQAGPGTYELAMTPGAVTAFQSWLE 141
>gi|260577551|ref|ZP_05845490.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
43734]
gi|258604275|gb|EEW17513.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
43734]
Length=139
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/134 (39%), Positives = 72/134 (54%), Gaps = 4/134 (2%)
Query 8 MVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRLS 67
+ L V V A+ +R + LR G ++R +P G WRHG+++Y G A FY+L
Sbjct 5 LYFLAAVALFVVTAVVWRFFTLRSQGYPVVVRRLPNSDGRHWRHGILKYSGHSAKFYKLR 64
Query 68 SLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDRGAL 127
SLR D L+R G I+SRR E + D + VVE+ R+ +EIALD
Sbjct 65 SLRPASDVVLTRLGTAIVSRREITPRESAFLEDNVHVVEVV----HRKTHWEIALDSAGD 120
Query 128 TAFLSWLESRPSPR 141
TA ++WLES PS R
Sbjct 121 TALVAWLESAPSER 134
>gi|19552437|ref|NP_600439.1| hypothetical protein NCgl1167 [Corynebacterium glutamicum ATCC
13032]
gi|62390102|ref|YP_225504.1| hypothetical protein cg1370 [Corynebacterium glutamicum ATCC
13032]
gi|145295354|ref|YP_001138175.1| hypothetical protein cgR_1293 [Corynebacterium glutamicum R]
gi|21323981|dbj|BAB98607.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
gi|41325438|emb|CAF19918.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC
13032]
gi|140845274|dbj|BAF54273.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344045675|gb|EGV41345.1| hypothetical protein CgS9114_03123 [Corynebacterium glutamicum
S9114]
Length=157
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/132 (39%), Positives = 74/132 (57%), Gaps = 4/132 (3%)
Query 11 LVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRLSSLR 70
LV+V AVL ++R + LR GT I+R++P G HGWRHG RY G + +++L SL
Sbjct 8 LVIVAVSAVLLAAWRFFTLRSRGTTVILRELPQSGVHGWRHGSFRYNGNDLEYFKLRSLS 67
Query 71 LWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDRGALTAF 130
D L+R V ++ RR P DE M+ + ++ + S D+ E+ALD AF
Sbjct 68 PMADLILNRLSVTLLDRRDPAADEAVFMSQGLKILHI-KSKNDQ---IELALDAHGEMAF 123
Query 131 LSWLESRPSPRA 142
+WLE+ P RA
Sbjct 124 TAWLEAAPDARA 135
>gi|68536418|ref|YP_251123.1| hypothetical protein jk1333 [Corynebacterium jeikeium K411]
gi|68264017|emb|CAI37505.1| hypothetical protein jk1333 [Corynebacterium jeikeium K411]
Length=139
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/134 (39%), Positives = 72/134 (54%), Gaps = 4/134 (2%)
Query 8 MVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRLS 67
+ L V V A+ +R + LR G ++R +P G WRHG+++Y G A FY+L
Sbjct 5 LYFLAAVALFVVTAVVWRFFTLRSQGYPVVVRRLPNSDGRHWRHGILKYSGHSARFYKLR 64
Query 68 SLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDRGAL 127
SLR D L+R G I+SRR E + D + VVE+ R+ +EIALD
Sbjct 65 SLRPASDVVLTRLGTAIVSRREITPRESAFLEDNVHVVEVV----HRKTHWEIALDSAGD 120
Query 128 TAFLSWLESRPSPR 141
TA ++WLES PS R
Sbjct 121 TALVAWLESAPSER 134
>gi|25027873|ref|NP_737927.1| hypothetical protein CE1317 [Corynebacterium efficiens YS-314]
gi|259506264|ref|ZP_05749166.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|23493156|dbj|BAC18127.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259166168|gb|EEW50722.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length=158
Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/129 (35%), Positives = 74/129 (58%), Gaps = 4/129 (3%)
Query 8 MVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRLS 67
+ LV++ LAV+ ++R + LR GT I+R +P G HGWRHG +RY G + +++L
Sbjct 5 ITALVIIALLAVVLAAWRFFTLRSRGTTVILRRLPQTGVHGWRHGSLRYNGNDLEYFKLR 64
Query 68 SLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDRGAL 127
SL D +RR VE+++RR P DE M+ + ++ + + + E+A+D
Sbjct 65 SLSPMADIIFNRRSVELLNRREPTTDEAVFMSSDTRILHV----RSKDAEMEMAMDGYGE 120
Query 128 TAFLSWLES 136
AF +WLE+
Sbjct 121 MAFTAWLEA 129
>gi|227503871|ref|ZP_03933920.1| conserved hypothetical protein [Corynebacterium striatum ATCC
6940]
gi|227199494|gb|EEI79542.1| conserved hypothetical protein [Corynebacterium striatum ATCC
6940]
Length=159
Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/148 (35%), Positives = 79/148 (54%), Gaps = 10/148 (6%)
Query 1 MSAPMIGMVVLVVVLGLAVLALSY----RLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRY 56
M++ +IG+ ++ V GL VL + R + LR+ GT+ ++R +PA H WRHGV+RY
Sbjct 1 MNSSVIGLFLIAV--GLIVLVCLFLAARRFFMLRERGTSVLLRSLPAKDSHTWRHGVMRY 58
Query 57 RGGEAAFYRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRV 116
G +++L S+ L D R +R VE+I R DE M++ V+ Q+
Sbjct 59 NGEYVEYFKLRSVSLQADLRFNRLDVELIGTRPLDDDEAAFMSEGQSVLHFTFGGQE--- 115
Query 117 GYEIALDRGALTAFLSWLESRPSPRARR 144
YEIA D + +W+E+ PS R R
Sbjct 116 -YEIASDSHGIMGLTAWIEAAPSKRQER 142
>gi|336325965|ref|YP_004605931.1| hypothetical protein CRES_1412 [Corynebacterium resistens DSM
45100]
gi|336101947|gb|AEI09767.1| hypothetical protein CRES_1412 [Corynebacterium resistens DSM
45100]
Length=148
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/142 (36%), Positives = 79/142 (56%), Gaps = 4/142 (2%)
Query 5 MIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFY 64
++G +++++VL ++ A +R + LR G ++R +P G WRHGV+ + G FY
Sbjct 3 VLGWLLVLIVLAVSA-ACMWRFFTLRSKGYPVVVRRLPNEDGRHWRHGVLVFSGVSVKFY 61
Query 65 RLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDR 124
+L S++ + L+R EI+ RR E M + V+ELC ++R +E+ALD
Sbjct 62 KLRSIKPDSNLVLTRLATEIVGRREITEKERAFMEPNMHVIELCHRQKER---WEVALDS 118
Query 125 GALTAFLSWLESRPSPRARRRS 146
TA +SWLES PS R R S
Sbjct 119 QGDTAMVSWLESAPSARRDRNS 140
>gi|225022776|ref|ZP_03711968.1| hypothetical protein CORMATOL_02821 [Corynebacterium matruchotii
ATCC 33806]
gi|224944459|gb|EEG25668.1| hypothetical protein CORMATOL_02821 [Corynebacterium matruchotii
ATCC 33806]
Length=152
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/140 (33%), Positives = 72/140 (52%), Gaps = 5/140 (3%)
Query 8 MVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYR-GGEAAFYRL 66
M ++V + VL +YR + LR G +R +PAVG HGWR+G++RY E FY+
Sbjct 6 MAIIVAFCLVLVLLGAYRFFTLRSNGNNVTLRRLPAVGNHGWRNGILRYESNNELKFYQF 65
Query 67 SSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDRGA 126
SL +PD R + + +R +E + D +V+ +D YE + + A
Sbjct 66 RSLSPFPDVIFHRSHLTLDGQRDYTEEEASFLFDGTPIVKFQHEGKD----YEAQMSKHA 121
Query 127 LTAFLSWLESRPSPRARRRS 146
AF+SW+ES P+ R + S
Sbjct 122 TMAFVSWIESAPNARLDKMS 141
>gi|305681876|ref|ZP_07404680.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
gi|305658349|gb|EFM47852.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
Length=152
Score = 84.3 bits (207), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/140 (33%), Positives = 72/140 (52%), Gaps = 5/140 (3%)
Query 8 MVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYR-GGEAAFYRL 66
M ++V + VL +YR + LR G +R +PAVG HGWR+G++RY E FY+
Sbjct 6 MAIIVAFCLVLVLLGAYRFFTLRSNGNNVTLRRLPAVGNHGWRNGILRYESNNELKFYQF 65
Query 67 SSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDRGA 126
SL +PD R + + +R +E + D +V+ +D YE + + A
Sbjct 66 RSLSPFPDVIFHRSHLTLDGQRDYTEEEASFLFDGTPIVKFRHEGKD----YEAQMSKHA 121
Query 127 LTAFLSWLESRPSPRARRRS 146
AF+SW+ES P+ R + S
Sbjct 122 TMAFVSWIESAPNARLDKMS 141
>gi|296119534|ref|ZP_06838092.1| conserved hypothetical protein [Corynebacterium ammoniagenes
DSM 20306]
gi|295967417|gb|EFG80684.1| conserved hypothetical protein [Corynebacterium ammoniagenes
DSM 20306]
Length=171
Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/124 (35%), Positives = 69/124 (56%), Gaps = 4/124 (3%)
Query 18 AVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRLSSLRLWPDRRL 77
V + R + LR G + +MR +PA G HGWRHGV+RY+G E F++L S+ D
Sbjct 18 CVFFAAMRFFTLRSRGASVLMRKLPARGYHGWRHGVLRYKGDEVDFFKLRSVSPMADHSF 77
Query 78 SRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDRGALTAFLSWLESR 137
SR +E++ R E ++D+ ++ + ++ YE+A + AL AF +W+E+
Sbjct 78 SRLDIELLDSRPATDGEAAFISDDYELIRFISAGRE----YELACTQHALMAFGAWVEAS 133
Query 138 PSPR 141
PS R
Sbjct 134 PSQR 137
>gi|300781406|ref|ZP_07091260.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
gi|300533113|gb|EFK54174.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
Length=152
Score = 84.0 bits (206), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/121 (41%), Positives = 59/121 (49%), Gaps = 4/121 (3%)
Query 24 YRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRLSSLRLWPDRRLSRRGVE 83
+R +R GT ++R +PA G HGWRHGVI Y G FY+L SL D L+R +
Sbjct 21 WRFLTVRNNGTQALIRVLPAQGTHGWRHGVITYSGDHMRFYKLRSLSFGADEVLTRSDIS 80
Query 84 IISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDRGALTAFLSWLESRPSPRAR 143
I RR E D M VVV D YE A + A A +SWLES P R
Sbjct 81 ITGRRKATETERDFMPGVEVVVLFSADGND----YEFATECHASMALISWLESAPDKRHV 136
Query 144 R 144
R
Sbjct 137 R 137
>gi|256380127|ref|YP_003103787.1| hypothetical protein Amir_6134 [Actinosynnema mirum DSM 43827]
gi|255924430|gb|ACU39941.1| hypothetical protein Amir_6134 [Actinosynnema mirum DSM 43827]
Length=144
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/143 (42%), Positives = 77/143 (54%), Gaps = 9/143 (6%)
Query 5 MIGMVVLV-VVLGLAVLALSYRLWK----LRQGGTAGIMRDIPAVGGHGWRHGVIRYRGG 59
M+G+ +V VVL LA L L+Y W+ LR GG +R G GW+ GV RYRG
Sbjct 1 MVGIAEVVGVVLFLAALVLTYTAWRRVRLLRAGGVHVALRSRVEENGRGWQLGVGRYRGD 60
Query 60 EAAFYRLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYE 119
E A+YR+ SLR PDR + R EI +RR P E M V+ ++ + E
Sbjct 61 EFAWYRVFSLRAGPDRTIHRSDFEIDTRREPTEPEAYAMPVGARVLRCKTASGE----VE 116
Query 120 IALDRGALTAFLSWLESRPSPRA 142
IA+ ALT FLSWLES P R+
Sbjct 117 IAMGPDALTGFLSWLESAPPGRS 139
>gi|291454174|ref|ZP_06593564.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|291357123|gb|EFE84025.1| conserved hypothetical protein [Streptomyces albus J1074]
Length=148
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/140 (38%), Positives = 79/140 (57%), Gaps = 12/140 (8%)
Query 5 MIGMVVLVVVLGLAVLALSYRLWKLRQGGT--AGIMRDIPAVG---GHGWRHGVIRYRGG 59
+ G+V+++V LGL V L RL + R GGT + D P G G GW++GV RY G
Sbjct 7 VCGLVIVLVTLGLLVFGLRRRLIQ-RSGGTFDCSLRWDAPEKGDTSGKGWQYGVARYNGD 65
Query 60 EAAFYRLSSLRLWPDRRLSRRGVEIISRRAPRG-DEFDIMTDEIVVVELCDSTQDRRVGY 118
+YR+ S P R L R +E++ RR+P G +E +++D +V+ + R V
Sbjct 66 RVEWYRVFSYSPRPKRMLERSAIEVVDRRSPEGEEELALLSDALVL-----GCRHRGVRL 120
Query 119 EIALDRGALTAFLSWLESRP 138
E+A+ ALT FL+WLE+ P
Sbjct 121 ELAMSEDALTGFLAWLEAAP 140
>gi|340794784|ref|YP_004760247.1| hypothetical protein CVAR_1822 [Corynebacterium variabile DSM
44702]
gi|340534694|gb|AEK37174.1| putative secreted protein [Corynebacterium variabile DSM 44702]
Length=177
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/139 (36%), Positives = 70/139 (51%), Gaps = 4/139 (2%)
Query 6 IGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYR 65
I ++V V V+ + R LR G ++R +P G WRHGV+ Y G +A Y+
Sbjct 29 ILIIVAVCVVAFGAILAGGRFLTLRSRGIPVVVRSVPNPEGRHWRHGVLVYGGLQAKVYK 88
Query 66 LSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDRG 125
L SLR D SR+ EI RR E + D++ V+ L D D +E+ALD
Sbjct 89 LRSLRPESDLSFSRQSTEITGRRPISSLEASFLEDDLHVLSLTDGPAD----WEVALDDA 144
Query 126 ALTAFLSWLESRPSPRARR 144
TA ++WLES PS R +
Sbjct 145 GDTALVAWLESAPSTRKEQ 163
>gi|254382330|ref|ZP_04997690.1| secreted protein [Streptomyces sp. Mg1]
gi|194341235|gb|EDX22201.1| secreted protein [Streptomyces sp. Mg1]
Length=150
Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/138 (40%), Positives = 78/138 (57%), Gaps = 12/138 (8%)
Query 7 GMVVLVVVLGLAVLALSYRLWKLRQGGTAGI-----MRDIPAVGGHGWRHGVIRYRGGEA 61
G+VV +VV+GL V L RL + R GGT + + P V G GW +GV RY G
Sbjct 11 GLVVALVVIGLFVFGLRRRLIQ-RSGGTFDCSLRWGVSEEPDVSGKGWVYGVARYSGDRI 69
Query 62 AFYRLSSLRLWPDRRLSRRGVEIISRRAPRG-DEFDIMTDEIVVVELCDSTQDRRVGYEI 120
++R+ S P R L R +E++SRRAP G +E +++D +V+ L T+ E+
Sbjct 70 EWFRVFSYAPRPRRLLERSSIEVVSRRAPEGEEELALLSDAVVLGALHRGTR-----LEL 124
Query 121 ALDRGALTAFLSWLESRP 138
A+ ALT FL+WLE+ P
Sbjct 125 AMSEDALTGFLAWLEAAP 142
>gi|302536958|ref|ZP_07289300.1| secreted protein [Streptomyces sp. C]
gi|302445853|gb|EFL17669.1| secreted protein [Streptomyces sp. C]
Length=150
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/138 (40%), Positives = 79/138 (58%), Gaps = 12/138 (8%)
Query 7 GMVVLVVVLGLAVLALSYRLWKLRQGGTAGI-----MRDIPAVGGHGWRHGVIRYRGGEA 61
G+VV +VV+GL V L RL + R GGT + + P V G GW +GV RY G
Sbjct 11 GLVVALVVIGLFVFGLRRRLIQ-RSGGTFDCSMRWGVAEEPDVSGKGWVYGVARYSGDRI 69
Query 62 AFYRLSSLRLWPDRRLSRRGVEIISRRAPRG-DEFDIMTDEIVVVELCDSTQDRRVGYEI 120
++R+ S P R L R +E+++RRAP G +E +++D +V L S Q R+ E+
Sbjct 70 EWFRVFSYSPRPRRLLERSSIEVLARRAPEGEEELALLSDAVV---LGCSHQGTRL--EL 124
Query 121 ALDRGALTAFLSWLESRP 138
A+ ALT FL+WLE+ P
Sbjct 125 AMSEDALTGFLAWLEAAP 142
>gi|227548014|ref|ZP_03978063.1| conserved hypothetical protein [Corynebacterium lipophiloflavum
DSM 44291]
gi|227079920|gb|EEI17883.1| conserved hypothetical protein [Corynebacterium lipophiloflavum
DSM 44291]
Length=172
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/141 (40%), Positives = 72/141 (52%), Gaps = 12/141 (8%)
Query 7 GMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFYRL 66
G+VVL+V L +R LR G+ G++R++PA G HGWRHGV RY FY+L
Sbjct 29 GLVVLLVAL--------WRFVSLRNIGSQGLLRNLPADGVHGWRHGVFRYSDECLRFYKL 80
Query 67 SSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDRGA 126
SL D L RR E+ R E +IM D V+ L +E A DR A
Sbjct 81 RSLTFSSDVALDRRMTEVDGFRELSELEREIMPDIDRVLVLSTPGGS----FEFASDRRA 136
Query 127 LTAFLSWLESRPSPRARRRSM 147
A +SWLES P R RR++
Sbjct 137 RMALVSWLESAPHVRQIRRAL 157
>gi|302558366|ref|ZP_07310708.1| secreted/membrane protein [Streptomyces griseoflavus Tu4000]
gi|302475984|gb|EFL39077.1| secreted/membrane protein [Streptomyces griseoflavus Tu4000]
Length=151
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/145 (37%), Positives = 79/145 (55%), Gaps = 13/145 (8%)
Query 1 MSAPMIGMVVLVVVLGLAVLALSYRLWKLRQGGT--AGIMRDIPAV----GGHGWRHGVI 54
++ + G+VV +VV+GL V L RL + R GGT + D P GG GW +GV
Sbjct 5 LALTVCGIVVALVVVGLFVFGLRRRLIQ-RSGGTFDCSLRWDAPEAAGDSGGKGWAYGVA 63
Query 55 RYRGGEAAFYRLSSLRLWPDRRLSRRGVEIISRRAPRG-DEFDIMTDEIVVVELCDSTQD 113
RY G ++R+ S L P R L R +E+ RR P G +E +++D +++ L T+
Sbjct 64 RYNGDRVEWFRVFSYALRPRRVLERSAIEVAGRRVPEGEEELALLSDAVILACLHRGTR- 122
Query 114 RRVGYEIALDRGALTAFLSWLESRP 138
E+A+ ALT FL+WLE+ P
Sbjct 123 ----LELAMSEDALTGFLAWLEAAP 143
>gi|227832902|ref|YP_002834609.1| hypothetical protein cauri_1076 [Corynebacterium aurimucosum
ATCC 700975]
gi|262182609|ref|ZP_06042030.1| hypothetical protein CaurA7_01340 [Corynebacterium aurimucosum
ATCC 700975]
gi|227453918|gb|ACP32671.1| putative membrane protein [Corynebacterium aurimucosum ATCC 700975]
Length=161
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/140 (32%), Positives = 76/140 (55%), Gaps = 6/140 (4%)
Query 5 MIGMVVLVVVLGLAVLALSYRLWKLRQGGTAGIMRDIPAVGGHGWRHGVIRYRGGEAAFY 64
++G+ LVV++ L + A+ R + +R GT+ ++R +P+ H WRHG++RY G F+
Sbjct 12 LLGLCALVVLVFLILAAV--RFFTVRSRGTSILLRQLPSKDSHSWRHGLVRYDGEYMDFF 69
Query 65 RLSSLRLWPDRRLSRRGVEIISRRAPRGDEFDIMTDEIVVVELCDSTQDRRVGYEIALDR 124
+L S+ ++R +R +E+ S R DE M ++ + +D YEIA D
Sbjct 70 KLRSVMPRANKRFNRLDIELGSTRPMDDDEASFMPSGHQIIRISIDGRD----YEIASDA 125
Query 125 GALTAFLSWLESRPSPRARR 144
+ A +W+ES PS R +
Sbjct 126 HGIMALNAWVESAPSKRQEK 145
>gi|297202405|ref|ZP_06919802.1| secreted protein [Streptomyces sviceus ATCC 29083]
gi|197710074|gb|EDY54108.1| secreted protein [Streptomyces sviceus ATCC 29083]
Length=150
Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/144 (37%), Positives = 78/144 (55%), Gaps = 12/144 (8%)
Query 1 MSAPMIGMVVLVVVLGLAVLALSYRLWKLRQGGT--AGIMRDIPAVG---GHGWRHGVIR 55
++ + G+VV +VVLGL V L RL + R GGT + D+P G GW +GV R
Sbjct 5 LALTVCGIVVALVVLGLFVFGLRRRLIQ-RSGGTFDCSLRWDVPEKSDPSGKGWSYGVAR 63
Query 56 YRGGEAAFYRLSSLRLWPDRRLSRRGVEIISRRAPRG-DEFDIMTDEIVVVELCDSTQDR 114
Y G +YR+ S P R L R +E+ RR P G +E +++D +++ L T+
Sbjct 64 YNGDRVEWYRVFSYAYRPRRVLERAAIEVAGRRLPDGEEEMALLSDAVILTCLHRGTR-- 121
Query 115 RVGYEIALDRGALTAFLSWLESRP 138
E+A+ ALT FL+WLE+ P
Sbjct 122 ---LELAMSEDALTGFLAWLEAAP 142
Lambda K H
0.327 0.141 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131150363096
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40