BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1313c Length=444 Score E Sequences producing significant alignments: (Bits) Value gi|308231806|ref|ZP_07413824.2| transposase [Mycobacterium tuber... 893 0.0 gi|15608453|ref|NP_215829.1| transposase [Mycobacterium tubercul... 891 0.0 gi|15840764|ref|NP_335801.1| IS1557 transposase [Mycobacterium t... 888 0.0 gi|340625317|ref|YP_004743769.1| transposase for insertion seque... 887 0.0 gi|308373145|ref|ZP_07431192.2| transposase [Mycobacterium tuber... 877 0.0 gi|298524817|ref|ZP_07012226.1| transposase [Mycobacterium tuber... 871 0.0 gi|323720046|gb|EGB29154.1| transposase [Mycobacterium tuberculo... 863 0.0 gi|289759965|ref|ZP_06519343.1| transposase [Mycobacterium tuber... 856 0.0 gi|328460574|gb|AEB05997.1| transposase [Mycobacterium tuberculo... 770 0.0 gi|340627435|ref|YP_004745887.1| transposase [Mycobacterium cane... 739 0.0 gi|308374204|ref|ZP_07435198.2| transposase [Mycobacterium tuber... 729 0.0 gi|262200571|ref|YP_003271779.1| transposase IS204/IS1001/IS1096... 565 5e-159 gi|317123719|ref|YP_004097831.1| transposase IS204/IS1001/IS1096... 565 8e-159 gi|262200056|ref|YP_003271264.1| transposase IS204/IS1001/IS1096... 561 6e-158 gi|239916613|ref|YP_002956171.1| transposase [Micrococcus luteus... 557 1e-156 gi|27531092|dbj|BAC54155.1| transposase [Terrabacter sp. DBF63] ... 551 8e-155 gi|308179087|ref|YP_003918493.1| transposase of ISAar34, ISL3 fa... 539 3e-151 gi|289753390|ref|ZP_06512768.1| LOW QUALITY PROTEIN: transposase... 500 2e-139 gi|239917926|ref|YP_002957484.1| transposase [Micrococcus luteus... 500 2e-139 gi|289755931|ref|ZP_06515309.1| LOW QUALITY PROTEIN: transposase... 498 8e-139 gi|289446908|ref|ZP_06436652.1| LOW QUALITY PROTEIN: transposase... 496 2e-138 gi|31792506|ref|NP_854999.1| hypothetical protein Mb1345c [Mycob... 489 5e-136 gi|289441235|ref|ZP_06430979.1| LOW QUALITY PROTEIN: transposase... 474 1e-131 gi|256397640|ref|YP_003119204.1| transposase IS204/IS1001/IS1096... 461 1e-127 gi|258654218|ref|YP_003203374.1| transposase IS204/IS1001/IS1096... 439 4e-121 gi|258651670|ref|YP_003200826.1| transposase IS204/IS1001/IS1096... 433 3e-119 gi|258655481|ref|YP_003204637.1| transposase IS204/IS1001/IS1096... 428 9e-118 gi|119716001|ref|YP_922966.1| transposase, IS204/IS1001/IS1096/I... 404 2e-110 gi|289761468|ref|ZP_06520846.1| transposase [Mycobacterium tuber... 399 5e-109 gi|31792507|ref|NP_855000.1| hypothetical protein Mb1346c [Mycob... 391 2e-106 gi|289569325|ref|ZP_06449552.1| transposase [Mycobacterium tuber... 388 1e-105 gi|111019752|ref|YP_702724.1| transposase [Rhodococcus jostii RH... 345 8e-93 gi|323717464|gb|EGB26667.1| transposase [Mycobacterium tuberculo... 319 6e-85 gi|323720270|gb|EGB29369.1| transposase [Mycobacterium tuberculo... 316 4e-84 gi|308406252|ref|ZP_07495711.2| hypothetical protein TMLG_00291 ... 315 9e-84 gi|308379624|ref|ZP_07486938.2| hypothetical protein TMJG_01053 ... 306 5e-81 gi|308373828|ref|ZP_07433768.2| hypothetical protein TMFG_02033 ... 300 4e-79 gi|308380042|ref|ZP_07488479.2| hypothetical protein TMKG_01813 ... 297 3e-78 gi|262200390|ref|YP_003271598.1| transposase IS204/IS1001/IS1096... 292 8e-77 gi|294995288|ref|ZP_06800979.1| transposase [Mycobacterium tuber... 292 9e-77 gi|84495582|ref|ZP_00994701.1| IS1557, transposase [Janibacter s... 288 1e-75 gi|308378902|ref|ZP_07484255.2| hypothetical protein TMJG_03956 ... 287 2e-75 gi|134098201|ref|YP_001103862.1| IS1557, transposase [Saccharopo... 284 2e-74 gi|291004378|ref|ZP_06562351.1| IS1557, transposase [Saccharopol... 284 3e-74 gi|33867237|ref|NP_898795.1| putative transposase [Rhodococcus e... 266 5e-69 gi|308373106|ref|ZP_07431030.2| hypothetical protein TMEG_01210 ... 263 6e-68 gi|308372662|ref|ZP_07429403.2| hypothetical protein TMDG_01536 ... 248 2e-63 gi|308380043|ref|ZP_07488480.2| hypothetical protein TMKG_01814 ... 246 7e-63 gi|323720192|gb|EGB29292.1| transposase [Mycobacterium tuberculo... 244 2e-62 gi|167969641|ref|ZP_02551918.1| transposase [Mycobacterium tuber... 240 3e-61 >gi|308231806|ref|ZP_07413824.2| transposase [Mycobacterium tuberculosis SUMu001] gi|308216013|gb|EFO75412.1| transposase [Mycobacterium tuberculosis SUMu001] Length=458 Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust. Identities = 444/444 (100%), Positives = 444/444 (100%), Gaps = 0/444 (0%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD Sbjct 15 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 74 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA Sbjct 75 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 134 Query 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV Sbjct 135 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 194 Query 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC Sbjct 195 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 254 Query 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR Sbjct 255 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 314 Query 301 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA 360 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA Sbjct 315 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA 374 Query 361 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA 420 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA Sbjct 375 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA 434 Query 421 LAMLTLAGHRPTLPGRHNHPQISQ 444 LAMLTLAGHRPTLPGRHNHPQISQ Sbjct 435 LAMLTLAGHRPTLPGRHNHPQISQ 458 >gi|15608453|ref|NP_215829.1| transposase [Mycobacterium tuberculosis H37Rv] gi|15610934|ref|NP_218315.1| transposase [Mycobacterium tuberculosis H37Rv] gi|15843420|ref|NP_338457.1| IS1557 transposase [Mycobacterium tuberculosis CDC1551] 47 more sequence titles Length=444 Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust. Identities = 443/444 (99%), Positives = 444/444 (100%), Gaps = 0/444 (0%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 +RNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD Sbjct 1 MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA Sbjct 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 Query 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV Sbjct 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 Query 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC Sbjct 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 Query 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR Sbjct 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 Query 301 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA 360 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA Sbjct 301 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA 360 Query 361 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA 420 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA Sbjct 361 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA 420 Query 421 LAMLTLAGHRPTLPGRHNHPQISQ 444 LAMLTLAGHRPTLPGRHNHPQISQ Sbjct 421 LAMLTLAGHRPTLPGRHNHPQISQ 444 >gi|15840764|ref|NP_335801.1| IS1557 transposase [Mycobacterium tuberculosis CDC1551] gi|148822531|ref|YP_001287285.1| transposase [Mycobacterium tuberculosis F11] gi|254364210|ref|ZP_04980256.1| transposase [Mycobacterium tuberculosis str. Haarlem] 22 more sequence titles Length=444 Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/444 (99%), Positives = 443/444 (99%), Gaps = 0/444 (0%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 +RNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD Sbjct 1 MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA Sbjct 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 Query 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV Sbjct 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 Query 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC Sbjct 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 Query 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR Sbjct 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 Query 301 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA 360 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA Sbjct 301 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA 360 Query 361 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA 420 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA Sbjct 361 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA 420 Query 421 LAMLTLAGHRPTLPGRHNHPQISQ 444 LAMLTLAGHRPT PGRHNHPQISQ Sbjct 421 LAMLTLAGHRPTRPGRHNHPQISQ 444 >gi|340625317|ref|YP_004743769.1| transposase for insertion sequence element IS1557 [Mycobacterium canettii CIPT 140010059] gi|340626091|ref|YP_004744543.1| transposase for insertion sequence element IS1557 [Mycobacterium canettii CIPT 140010059] gi|340626582|ref|YP_004745034.1| transposase for insertion sequence element is1557 [Mycobacterium canettii CIPT 140010059] 9 more sequence titles Length=444 Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/444 (99%), Positives = 442/444 (99%), Gaps = 0/444 (0%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 +RNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD Sbjct 1 MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA Sbjct 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 Query 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV Sbjct 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 Query 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC Sbjct 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 Query 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR Sbjct 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 Query 301 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA 360 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKE LRHVFSVKGEEGKQALDRWISWA Sbjct 301 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKEGLRHVFSVKGEEGKQALDRWISWA 360 Query 361 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA 420 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA Sbjct 361 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA 420 Query 421 LAMLTLAGHRPTLPGRHNHPQISQ 444 LAML LAGHRPTLPGRHNHPQISQ Sbjct 421 LAMLALAGHRPTLPGRHNHPQISQ 444 >gi|308373145|ref|ZP_07431192.2| transposase [Mycobacterium tuberculosis SUMu005] gi|308338670|gb|EFP27521.1| transposase [Mycobacterium tuberculosis SUMu005] Length=439 Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust. Identities = 437/439 (99%), Positives = 438/439 (99%), Gaps = 0/439 (0%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 +RNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD Sbjct 1 MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA Sbjct 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 Query 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV Sbjct 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 Query 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC Sbjct 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 Query 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR Sbjct 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 Query 301 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA 360 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA Sbjct 301 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA 360 Query 361 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA 420 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA Sbjct 361 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA 420 Query 421 LAMLTLAGHRPTLPGRHNH 439 LAMLTLAGHRPT PGRHNH Sbjct 421 LAMLTLAGHRPTRPGRHNH 439 >gi|298524817|ref|ZP_07012226.1| transposase [Mycobacterium tuberculosis 94_M4241A] gi|298494611|gb|EFI29905.1| transposase [Mycobacterium tuberculosis 94_M4241A] Length=444 Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/444 (98%), Positives = 436/444 (99%), Gaps = 0/444 (0%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 +RNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD Sbjct 1 MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA Sbjct 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 Query 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV Sbjct 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 Query 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC Sbjct 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 Query 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR Sbjct 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 Query 301 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA 360 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA Sbjct 301 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA 360 Query 361 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA 420 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIES TRIAFGFRSPQALIA Sbjct 361 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESGEEVAGEETRIAFGFRSPQALIA 420 Query 421 LAMLTLAGHRPTLPGRHNHPQISQ 444 LAMLTLAGHRPTLPGRHNHPQISQ Sbjct 421 LAMLTLAGHRPTLPGRHNHPQISQ 444 >gi|323720046|gb|EGB29154.1| transposase [Mycobacterium tuberculosis CDC1551A] Length=432 Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/432 (99%), Positives = 432/432 (100%), Gaps = 0/432 (0%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 +RNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD Sbjct 1 MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA Sbjct 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 Query 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV Sbjct 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 Query 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC Sbjct 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 Query 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR Sbjct 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 Query 301 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA 360 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA Sbjct 301 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA 360 Query 361 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA 420 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA Sbjct 361 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA 420 Query 421 LAMLTLAGHRPT 432 LAMLTLAGHRPT Sbjct 421 LAMLTLAGHRPT 432 >gi|289759965|ref|ZP_06519343.1| transposase [Mycobacterium tuberculosis T85] gi|289715529|gb|EFD79541.1| transposase [Mycobacterium tuberculosis T85] Length=427 Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust. Identities = 425/427 (99%), Positives = 426/427 (99%), Gaps = 0/427 (0%) Query 18 VIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYDRGAGLRQWRSLDWGTVE 77 +IEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYDRGAGLRQWRSLDWGTVE Sbjct 1 MIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYDRGAGLRQWRSLDWGTVE 60 Query 78 VFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWR 137 VFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWR Sbjct 61 VFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWR 120 Query 138 TVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPGHDK 197 TVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPGHDK Sbjct 121 TVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPGHDK 180 Query 198 ATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVE 257 ATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVE Sbjct 181 ATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVE 240 Query 258 RRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAK 317 RRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAK Sbjct 241 RRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAK 300 Query 318 LAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKR 377 LAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKR Sbjct 301 LAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKR 360 Query 378 HRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPGRH 437 HRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPT PGRH Sbjct 361 HRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTRPGRH 420 Query 438 NHPQISQ 444 NHPQISQ Sbjct 421 NHPQISQ 427 >gi|328460574|gb|AEB05997.1| transposase [Mycobacterium tuberculosis KZN 4207] Length=402 Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust. Identities = 381/381 (100%), Positives = 381/381 (100%), Gaps = 0/381 (0%) Query 64 GLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVAC 123 GLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVAC Sbjct 22 GLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVAC 81 Query 124 SKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDH 183 SKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDH Sbjct 82 SKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDH 141 Query 184 DSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADP 243 DSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADP Sbjct 142 DSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADP 201 Query 244 FHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYAL 303 FHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYAL Sbjct 202 FHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYAL 261 Query 304 WKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRC 363 WKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRC Sbjct 262 WKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRC 321 Query 364 RIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAM 423 RIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAM Sbjct 322 RIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAM 381 Query 424 LTLAGHRPTLPGRHNHPQISQ 444 LTLAGHRPTLPGRHNHPQISQ Sbjct 382 LTLAGHRPTLPGRHNHPQISQ 402 >gi|340627435|ref|YP_004745887.1| transposase [Mycobacterium canettii CIPT 140010059] gi|340005625|emb|CCC44789.1| transposase [Mycobacterium canettii CIPT 140010059] Length=437 Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/439 (87%), Positives = 391/439 (90%), Gaps = 4/439 (0%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 +RNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD Sbjct 1 MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA Sbjct 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 Query 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV Sbjct 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 Query 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC Sbjct 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 Query 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR Sbjct 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 Query 301 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA 360 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKE LRHVFSVKGEEGKQALDRWISWA Sbjct 301 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKEGLRHVFSVKGEEGKQALDRWISWA 360 Query 361 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA 420 QRCRIPVF R+ R R + L L L +T + R R +G P ++ Sbjct 361 QRCRIPVFRAGPHRLDRPRRFVGGGLL--LVMPLAVATGSDGR--PRQGYGGSHPGDVVG 416 Query 421 LAMLTLAGHRPTLPGRHNH 439 + + PG +H Sbjct 417 CCRTRSSRRALSWPGCRSH 435 >gi|308374204|ref|ZP_07435198.2| transposase [Mycobacterium tuberculosis SUMu006] gi|308342713|gb|EFP31564.1| transposase [Mycobacterium tuberculosis SUMu006] Length=363 Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/363 (99%), Positives = 362/363 (99%), Gaps = 0/363 (0%) Query 80 LEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWRTV 139 +EAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWRTV Sbjct 1 MEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWRTV 60 Query 140 GAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPGHDKAT 199 GAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPGHDKAT Sbjct 61 GAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPGHDKAT 120 Query 200 LGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVERR 259 LGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVERR Sbjct 121 LGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVERR 180 Query 260 RAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLA 319 RAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLA Sbjct 181 RAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLA 240 Query 320 WIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHR 379 WIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHR Sbjct 241 WIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHR 300 Query 380 VAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPGRHNH 439 VAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPT PGRHNH Sbjct 301 VAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTRPGRHNH 360 Query 440 PQI 442 PQI Sbjct 361 PQI 363 >gi|262200571|ref|YP_003271779.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia bronchialis DSM 43247] gi|262202683|ref|YP_003273891.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia bronchialis DSM 43247] gi|262083918|gb|ACY19886.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia bronchialis DSM 43247] gi|262086030|gb|ACY21998.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia bronchialis DSM 43247] Length=420 Score = 565 bits (1457), Expect = 5e-159, Method: Compositional matrix adjust. Identities = 293/436 (68%), Positives = 338/436 (78%), Gaps = 17/436 (3%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 ++N L+RALLGV+K TV+EDIEF+ED+ ++A VRP RCGRC R++ WYD Sbjct 1 MQNATLWRALLGVEK-TVVEDIEFDEDEQT----LVACVRPTRRAGARCGRCQRRSPWYD 55 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 RG G R+WR+LD GT++V LEA+APRVNC HGPTV AVPWARH AGHT FD+ VAWLA Sbjct 56 RGEGRRRWRALDLGTIQVHLEADAPRVNCREHGPTVRAVPWARHGAGHTTGFDEQVAWLA 115 Query 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 CSK+AV ELMRIAWRTVGAI+ RVWAD EK DRFA+LRRIGIDEISYKR HRYLTVV Sbjct 116 TQCSKSAVTELMRIAWRTVGAIITRVWADVEKLHDRFADLRRIGIDEISYKRGHRYLTVV 175 Query 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 VDHD+GRLVWAAPG DKATL FFDALG ER +QITHVSAD ADWI+ VV + CP A++C Sbjct 176 VDHDTGRLVWAAPGRDKATLEGFFDALGEERCSQITHVSADGADWISTVVADHCPHAVRC 235 Query 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 ADPFHVV WAT+ALD RR AWN AR A T+ + GR A+ LK AR Sbjct 236 ADPFHVVRWATDALDEVRRAAWNQARGAA-TQRRAGRASG-----------HAKALKHAR 283 Query 301 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA 360 YALWKNPE+LT RQ AKLAW+AKTDPRL+RAYLLKE LR VF + E +AL+ WI WA Sbjct 284 YALWKNPENLTVRQQAKLAWVAKTDPRLHRAYLLKEGLRLVFQLPHAEAAEALEVWIRWA 343 Query 361 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA 420 +RCRIP FVEL RI +H+ +I AA++HGLS G IES NTKIRL+TR+AFGFRSP+ALIA Sbjct 344 RRCRIPAFVELQRRIVKHQASILAAIEHGLSNGRIESVNTKIRLITRVAFGFRSPEALIA 403 Query 421 LAMLTLAGHRPTLPGR 436 LAML L GHRP LPGR Sbjct 404 LAMLNLGGHRPVLPGR 419 >gi|317123719|ref|YP_004097831.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Intrasporangium calvum DSM 43043] gi|317123942|ref|YP_004098054.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Intrasporangium calvum DSM 43043] gi|317124019|ref|YP_004098131.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Intrasporangium calvum DSM 43043] 7 more sequence titles Length=420 Score = 565 bits (1455), Expect = 8e-159, Method: Compositional matrix adjust. Identities = 286/437 (66%), Positives = 339/437 (78%), Gaps = 17/437 (3%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 +R+ L+RALLGVDK TVIE +EF+ED+ ++A+VRPRS RCG CGR YD Sbjct 1 MRDASLWRALLGVDK-TVIEQVEFDEDEQ----LLVAQVRPRSRARSRCGVCGRSCPGYD 55 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 G G R+WR+LD GTV+V LEA+APRV+C HG V AVPWARH AGHTYAFD+ VAWLA Sbjct 56 GGEGRRRWRALDLGTVQVVLEADAPRVSCRQHGVVVAAVPWARHGAGHTYAFDEQVAWLA 115 Query 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 SKT V +LMRIAWRTVG+I+ RVWADTE++ DRFA L+RIGIDEISYKR HRYLT+V Sbjct 116 TQASKTTVTQLMRIAWRTVGSIITRVWADTERQFDRFAGLKRIGIDEISYKRGHRYLTIV 175 Query 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 VDHDSGRLVWAAPG DKATL FFDALG +R A +THVSAD ADWIA VVT+RCP A++C Sbjct 176 VDHDSGRLVWAAPGRDKATLHAFFDALGEQRCAAVTHVSADGADWIAKVVTQRCPQAVRC 235 Query 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 ADPFHVV+WAT+ALD RR AWN AR R R G+ + A+ LKGAR Sbjct 236 ADPFHVVSWATDALDEVRRDAWNQARGAV------TRRRAGRASG------HAKDLKGAR 283 Query 301 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA 360 YALWKNP +LTE+Q AKLAW+A+TDPRLYR YLLKE LR VF + ++ +ALDRW++WA Sbjct 284 YALWKNPGNLTEKQQAKLAWVARTDPRLYRGYLLKEGLRLVFQLPHQQAAEALDRWVAWA 343 Query 361 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA 420 +RCRI FV L RI +HR +I AA++HGLS G IES NTK+RL+TRIAFGFRSP++LIA Sbjct 344 RRCRIEAFVTLQRRIVKHRDSILAAIEHGLSNGRIESVNTKVRLITRIAFGFRSPESLIA 403 Query 421 LAMLTLAGHRPTLPGRH 437 LAML+L GHRP LPGR+ Sbjct 404 LAMLSLGGHRPVLPGRN 420 >gi|262200056|ref|YP_003271264.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia bronchialis DSM 43247] gi|262083403|gb|ACY19371.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia bronchialis DSM 43247] Length=420 Score = 561 bits (1447), Expect = 6e-158, Method: Compositional matrix adjust. Identities = 292/436 (67%), Positives = 337/436 (78%), Gaps = 17/436 (3%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 ++N L+RALLGV+K TV+EDIEF+ED+ ++A VR RCGRC R++ WYD Sbjct 1 MQNATLWRALLGVEK-TVVEDIEFDEDEQT----LVACVRHTRRAGARCGRCQRRSPWYD 55 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 RG G R+WR+LD GT++V LEA+APRVNC HGPTV AVPWARH AGHT FD+ VAWLA Sbjct 56 RGEGRRRWRALDLGTIQVHLEADAPRVNCREHGPTVRAVPWARHGAGHTTGFDEQVAWLA 115 Query 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 CSK+AV ELMRIAWRTVGAI+ RVWAD EK DRFA+LRRIGIDEISYKR HRYLTVV Sbjct 116 TQCSKSAVTELMRIAWRTVGAIITRVWADVEKLHDRFADLRRIGIDEISYKRGHRYLTVV 175 Query 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 VDHD+GRLVWAAPG DKATL FFDALG ER +QITHVSAD ADWI+ VV + CP A++C Sbjct 176 VDHDTGRLVWAAPGRDKATLEGFFDALGEERCSQITHVSADGADWISTVVADHCPHAVRC 235 Query 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 ADPFHVV WAT+ALD RR AWN AR A T+ + GR A+ LK AR Sbjct 236 ADPFHVVRWATDALDEVRRAAWNQARGAA-TQRRAGRASG-----------HAKALKHAR 283 Query 301 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA 360 YALWKNPE+LT RQ AKLAW+AKTDPRL+RAYLLKE LR VF + E +AL+ WI WA Sbjct 284 YALWKNPENLTVRQQAKLAWVAKTDPRLHRAYLLKEGLRLVFQLPHAEAAEALEVWIRWA 343 Query 361 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA 420 +RCRIP FVEL RI +H+ +I AA++HGLS G IES NTKIRL+TR+AFGFRSP+ALIA Sbjct 344 RRCRIPAFVELQRRIVKHQASILAAIEHGLSNGRIESVNTKIRLITRVAFGFRSPEALIA 403 Query 421 LAMLTLAGHRPTLPGR 436 LAML L GHRP LPGR Sbjct 404 LAMLNLGGHRPVLPGR 419 >gi|239916613|ref|YP_002956171.1| transposase [Micrococcus luteus NCTC 2665] gi|239916865|ref|YP_002956423.1| transposase [Micrococcus luteus NCTC 2665] gi|239917004|ref|YP_002956562.1| transposase [Micrococcus luteus NCTC 2665] 10 more sequence titles Length=420 Score = 557 bits (1435), Expect = 1e-156, Method: Compositional matrix adjust. Identities = 293/436 (68%), Positives = 343/436 (79%), Gaps = 17/436 (3%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 +RN L+R+LLGV+K TV+E IEF+EDD ++A VRPR+ V RCGRCGR++ YD Sbjct 1 MRNASLWRSLLGVEK-TVVEGIEFDEDDQ----LLVAHVRPRARVRGRCGRCGRRSPGYD 55 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 RG G R+WR+LD GTV+V+LEA+APRV C HGPTV AVPWARH AGHT FD+ VAWLA Sbjct 56 RGEGRRRWRALDLGTVQVYLEADAPRVACREHGPTVAAVPWARHGAGHTVVFDEQVAWLA 115 Query 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 CSK+AV ELMRIAWRTVGAI+ RVWAD E DRFA LRRIGIDEISYK+ HRYLT+V Sbjct 116 TQCSKSAVTELMRIAWRTVGAIITRVWADVEALGDRFAGLRRIGIDEISYKKGHRYLTIV 175 Query 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 VDHD+GRLVWAAPG DKATL FF+ALG +R A+ITHVSAD ADWIA VV ERCP+A++C Sbjct 176 VDHDTGRLVWAAPGRDKATLAAFFEALGPDRCAEITHVSADGADWIAAVVAERCPNAVRC 235 Query 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 ADPFH+V WATEALD RR+AWN+AR R GR G + A+ LK AR Sbjct 236 ADPFHIVKWATEALDEVRRQAWNEARGAVRQRRA---GRAGGH---------AKALKHAR 283 Query 301 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA 360 YALWKNPE+LT RQ AKLAW+AKTDPRL+RAYLLKE LR VF + +E + AL+RWI WA Sbjct 284 YALWKNPENLTTRQQAKLAWVAKTDPRLHRAYLLKEGLRLVFQLPADEAETALERWIGWA 343 Query 361 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA 420 +RCRIP FVEL RI +H+ +I AA++HGLS G IES NTKIRL+TR+AFGF+SP+ALIA Sbjct 344 RRCRIPAFVELQRRIVKHKASILAAIEHGLSNGRIESVNTKIRLITRVAFGFKSPEALIA 403 Query 421 LAMLTLAGHRPTLPGR 436 LAML L GHRP LPGR Sbjct 404 LAMLNLGGHRPVLPGR 419 >gi|27531092|dbj|BAC54155.1| transposase [Terrabacter sp. DBF63] gi|75992411|dbj|BAE45077.1| transposase [Terrabacter sp. DBF63] gi|75992415|dbj|BAE45081.1| transposase [Terrabacter sp. DBF63] gi|313150333|dbj|BAJ39925.1| putative transposase [Terrabacter sp. DBF63] Length=420 Score = 551 bits (1420), Expect = 8e-155, Method: Compositional matrix adjust. Identities = 289/436 (67%), Positives = 341/436 (79%), Gaps = 17/436 (3%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 +RN L+R+LLGV+K TV+EDIEF+EDD ++A VRPR+ V RCGRCGR++ YD Sbjct 1 MRNASLWRSLLGVEK-TVVEDIEFDEDDQ----LLVAHVRPRARVRGRCGRCGRRSPGYD 55 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 RG G R+WR+LD GTV+V+LEA+APRV C HGPTV AVPWARH AGHT FD+ VAWLA Sbjct 56 RGEGRRRWRALDLGTVQVYLEADAPRVACRQHGPTVAAVPWARHGAGHTLVFDEQVAWLA 115 Query 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 CSK+AV ELMRIAWRTVGAI+ RVW D E DRFA LRRIGIDEISYK+ HRYLT+V Sbjct 116 TQCSKSAVTELMRIAWRTVGAIITRVWTDVEALGDRFAGLRRIGIDEISYKKGHRYLTIV 175 Query 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 VDHD+GRLVWAAPG DK TL FF+ALG +R A ITHVSAD ADWIA VV +RCP+A++C Sbjct 176 VDHDTGRLVWAAPGRDKPTLARFFEALGPDRCAAITHVSADGADWIAAVVAQRCPNAVRC 235 Query 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 ADPFH+V WAT+ALD RR+AWN+AR R R G+ + A+ LK AR Sbjct 236 ADPFHIVKWATDALDEVRRQAWNEARGAVRQR------RAGRASG------HAKALKHAR 283 Query 301 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA 360 YALWKNPE+LT RQ AKLAW+AKTDPRL+RAYLLKE LR VF + +E + AL+RWI WA Sbjct 284 YALWKNPENLTTRQQAKLAWVAKTDPRLHRAYLLKEGLRLVFQLPADEAETALERWIGWA 343 Query 361 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA 420 +RCRIP FVEL RI +H+ +I AA++HGLS G IES NTKIRL+TR+AFGF+SP+ALIA Sbjct 344 RRCRIPAFVELQRRIVKHKASILAAIEHGLSNGRIESVNTKIRLITRVAFGFKSPEALIA 403 Query 421 LAMLTLAGHRPTLPGR 436 LAML L GHRP LPGR Sbjct 404 LAMLNLGGHRPVLPGR 419 >gi|308179087|ref|YP_003918493.1| transposase of ISAar34, ISL3 family [Arthrobacter arilaitensis Re117] gi|307746550|emb|CBT77522.1| transposase of ISAar34, ISL3 family [Arthrobacter arilaitensis Re117] Length=433 Score = 539 bits (1389), Expect = 3e-151, Method: Compositional matrix adjust. Identities = 270/437 (62%), Positives = 324/437 (75%), Gaps = 6/437 (1%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 ++ ++ ALLGV+K TV D + ++ARV P ++ RCG C R+ S YD Sbjct 1 MQKTSIWAALLGVEKTTV-----HHVDTCPETGVLLARVTPHKSLRNRCGICSRRCSRYD 55 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 RG G R+WR+LD GT E +L A APRV CP HG V AVPWARH AGHT FD V+WLA Sbjct 56 RGEGPRRWRTLDLGTTETYLVAHAPRVRCPEHGVIVAAVPWARHQAGHTRDFDQQVSWLA 115 Query 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 CSK+AV LMRIAWRTVG+I+ RVW DT K D FA+L+RIGIDEISYKR H+Y+TVV Sbjct 116 TQCSKSAVTVLMRIAWRTVGSIINRVWKDTAKTFDPFADLKRIGIDEISYKRGHKYITVV 175 Query 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 VDHDSGRL+WA+PG DKATL FFDALG ER+AQITHVSADAA+WIA VV ERCP A++ Sbjct 176 VDHDSGRLIWASPGRDKATLRKFFDALGEERSAQITHVSADAANWIATVVAERCPQAVRV 235 Query 241 ADPFHVVAWATEALDVERRRAWNDARAIA-RTEPKWGRGRPGKNAAPRPGRERARRLKGA 299 ADPFHVV WAT ALD ERR +WN AR A EP GRGRP K+A RP ++A +LK + Sbjct 236 ADPFHVVQWATGALDEERRASWNRARKAAEENEPARGRGRPPKDAPERPDSQKATKLKNS 295 Query 300 RYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISW 359 RYALWKNPEDLT +Q KL WI +TDPRL RAY LKE LR +F + + ALD+W+SW Sbjct 296 RYALWKNPEDLTVKQKVKLDWIVQTDPRLGRAYYLKEGLRTIFRLPHADAVVALDKWVSW 355 Query 360 AQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALI 419 A+RCRIP FV+L I +HR AI A+++HGLS G IES NTKIRL+TR+AFGF++P+ALI Sbjct 356 ARRCRIPAFVKLQKSIVKHREAILASIEHGLSNGRIESMNTKIRLITRVAFGFKAPEALI 415 Query 420 ALAMLTLAGHRPTLPGR 436 LAML+L G +P LPGR Sbjct 416 GLAMLSLGGRKPVLPGR 432 >gi|289753390|ref|ZP_06512768.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis EAS054] gi|289693977|gb|EFD61406.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis EAS054] Length=277 Score = 500 bits (1288), Expect = 2e-139, Method: Compositional matrix adjust. Identities = 249/252 (99%), Positives = 250/252 (99%), Gaps = 0/252 (0%) Query 193 PGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATE 252 PG +ATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATE Sbjct 26 PGPPRATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATE 85 Query 253 ALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTE 312 ALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTE Sbjct 86 ALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTE 145 Query 313 RQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELA 372 RQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELA Sbjct 146 RQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELA 205 Query 373 ARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPT 432 ARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPT Sbjct 206 ARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPT 265 Query 433 LPGRHNHPQISQ 444 LPGRHNHPQISQ Sbjct 266 LPGRHNHPQISQ 277 >gi|239917926|ref|YP_002957484.1| transposase [Micrococcus luteus NCTC 2665] gi|239839133|gb|ACS30930.1| transposase [Micrococcus luteus NCTC 2665] Length=350 Score = 500 bits (1287), Expect = 2e-139, Method: Compositional matrix adjust. Identities = 249/361 (69%), Positives = 287/361 (80%), Gaps = 12/361 (3%) Query 76 VEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIA 135 ++V+LEA+APRV C HGPTV AVPWARH AGHT FD+ VAWLA CSK+AV ELMRIA Sbjct 1 MQVYLEADAPRVACREHGPTVAAVPWARHGAGHTVVFDEQVAWLATQCSKSAVTELMRIA 60 Query 136 WRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPGH 195 WRTVGAI+ RVWAD E DRFA LRRIGIDEISYK+ HRYLT+VVDHD+GRLVWAAPG Sbjct 61 WRTVGAIITRVWADVEALGDRFAGLRRIGIDEISYKKGHRYLTIVVDHDTGRLVWAAPGR 120 Query 196 DKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALD 255 DKATL FF+ALG +R A+ITHVSAD ADWIA VV ERCP+A++CADPFH+V WATEALD Sbjct 121 DKATLAAFFEALGPDRCAEITHVSADGADWIAAVVAERCPNAVRCADPFHIVKWATEALD 180 Query 256 VERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQS 315 RR+AWN+AR R GR G + A+ LK ARYALWKNPE+LT RQ Sbjct 181 EVRRQAWNEARGAVRQRRA---GRAGGH---------AKALKHARYALWKNPENLTTRQQ 228 Query 316 AKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARI 375 AKLAW+AKTDPRL+RAYLLKE LR VF + +E + AL+RWI WA+RCRIP FVEL RI Sbjct 229 AKLAWVAKTDPRLHRAYLLKEGLRLVFQLPADEAETALERWIGWARRCRIPAFVELQRRI 288 Query 376 KRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPG 435 +H+ +I AA++HGLS G IES NTKIRL+TR+AFGF+SP+ALIALAML L GHRP LPG Sbjct 289 VKHKASILAAIEHGLSNGRIESVNTKIRLITRVAFGFKSPEALIALAMLNLGGHRPVLPG 348 Query 436 R 436 R Sbjct 349 R 349 >gi|289755931|ref|ZP_06515309.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis EAS054] gi|289696518|gb|EFD63947.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis EAS054] Length=277 Score = 498 bits (1282), Expect = 8e-139, Method: Compositional matrix adjust. Identities = 248/252 (99%), Positives = 249/252 (99%), Gaps = 0/252 (0%) Query 193 PGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATE 252 PG +ATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATE Sbjct 26 PGPPRATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATE 85 Query 253 ALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTE 312 ALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTE Sbjct 86 ALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTE 145 Query 313 RQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELA 372 RQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELA Sbjct 146 RQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELA 205 Query 373 ARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPT 432 ARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAML LAGHRPT Sbjct 206 ARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLALAGHRPT 265 Query 433 LPGRHNHPQISQ 444 LPGRHNHPQISQ Sbjct 266 LPGRHNHPQISQ 277 >gi|289446908|ref|ZP_06436652.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis CPHL_A] gi|289419866|gb|EFD17067.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis CPHL_A] Length=263 Score = 496 bits (1278), Expect = 2e-138, Method: Compositional matrix adjust. Identities = 248/251 (99%), Positives = 249/251 (99%), Gaps = 0/251 (0%) Query 194 GHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEA 253 G +ATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEA Sbjct 13 GPPRATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEA 72 Query 254 LDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTER 313 LDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTER Sbjct 73 LDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTER 132 Query 314 QSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAA 373 QSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAA Sbjct 133 QSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAA 192 Query 374 RIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTL 433 RIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTL Sbjct 193 RIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTL 252 Query 434 PGRHNHPQISQ 444 PGRHNHPQISQ Sbjct 253 PGRHNHPQISQ 263 >gi|31792506|ref|NP_854999.1| hypothetical protein Mb1345c [Mycobacterium bovis AF2122/97] gi|31794972|ref|NP_857465.1| transposase [Mycobacterium bovis AF2122/97] gi|121637242|ref|YP_977465.1| putative transposase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|31618095|emb|CAD94206.1| POSSIBLE TRANSPOSASE [SECOND PART] [Mycobacterium bovis AF2122/97] gi|31620570|emb|CAD96014.1| PUTATIVE TRANSPOSASE [SECOND PART] [Mycobacterium bovis AF2122/97] gi|121492889|emb|CAL71360.1| Possible transposase [second part] [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|341601260|emb|CCC63933.1| possible transposase [second part] [Mycobacterium bovis BCG str. Moreau RDJ] Length=243 Score = 489 bits (1258), Expect = 5e-136, Method: Compositional matrix adjust. Identities = 242/243 (99%), Positives = 243/243 (100%), Gaps = 0/243 (0%) Query 202 LFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVERRRA 261 +FFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVERRRA Sbjct 1 MFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVERRRA 60 Query 262 WNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLAWI 321 WNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLAWI Sbjct 61 WNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLAWI 120 Query 322 AKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVA 381 AKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVA Sbjct 121 AKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVA 180 Query 382 IDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQ 441 IDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQ Sbjct 181 IDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQ 240 Query 442 ISQ 444 ISQ Sbjct 241 ISQ 243 >gi|289441235|ref|ZP_06430979.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis T46] gi|289445399|ref|ZP_06435143.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis CPHL_A] gi|289572450|ref|ZP_06452677.1| LOW QUALITY PROTEIN: transposase for insertion sequence element [Mycobacterium tuberculosis K85] gi|289573976|ref|ZP_06454203.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis K85] gi|289414154|gb|EFD11394.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis T46] gi|289418357|gb|EFD15558.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis CPHL_A] gi|289536881|gb|EFD41459.1| LOW QUALITY PROTEIN: transposase for insertion sequence element [Mycobacterium tuberculosis K85] gi|289538407|gb|EFD42985.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis K85] Length=263 Score = 474 bits (1221), Expect = 1e-131, Method: Compositional matrix adjust. Identities = 247/251 (99%), Positives = 248/251 (99%), Gaps = 0/251 (0%) Query 194 GHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEA 253 G +ATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEA Sbjct 13 GPPRATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEA 72 Query 254 LDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTER 313 LDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTER Sbjct 73 LDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTER 132 Query 314 QSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAA 373 QSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAA Sbjct 133 QSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAA 192 Query 374 RIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTL 433 RIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAML LAGHRPTL Sbjct 193 RIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLALAGHRPTL 252 Query 434 PGRHNHPQISQ 444 PGRHNHPQISQ Sbjct 253 PGRHNHPQISQ 263 >gi|256397640|ref|YP_003119204.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Catenulispora acidiphila DSM 44928] gi|256363866|gb|ACU77363.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Catenulispora acidiphila DSM 44928] Length=425 Score = 461 bits (1185), Expect = 1e-127, Method: Compositional matrix adjust. Identities = 261/439 (60%), Positives = 305/439 (70%), Gaps = 15/439 (3%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 +RN L+ ALLG+ VIE ++ +E +++ +VR ++A RRCGRC R+ YD Sbjct 1 MRNKSLWDALLGLAD-AVIESVDVDET----SGQIVVQVRIKAAASRRCGRCLRRCPRYD 55 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 +G R+WR +D G + V++ AEAPRV+C G +PWAR AGHT FD +AWLA Sbjct 56 QGTSRRRWRHMDAGVLMVWIVAEAPRVSCRDCGVVTCHIPWARAGAGHTADFDHHIAWLA 115 Query 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 SKT V L RIAWRTVGAI+ RVWAD E DRFANL RIGIDEISYK+ RYLT+V Sbjct 116 TNASKTTVATLARIAWRTVGAIITRVWADIEACTDRFANLSRIGIDEISYKKGQRYLTMV 175 Query 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 VDHD+GRL+WA G D T+ FFDALG ER ITHVSADAA WIA V CP AI+C Sbjct 176 VDHDTGRLLWAGVGRDTETVDEFFDALGPERCVAITHVSADAAPWIAKSVRTHCPGAIRC 235 Query 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 AD FHVVAWAT+ALD RR+AWN A AR + GR G AR LKGAR Sbjct 236 ADAFHVVAWATKALDTVRRQAWNTAAGRARDTNRTGRNSTGA----------ARVLKGAR 285 Query 301 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA 360 +ALWKNPEDLT Q KL WIAKTDP L+RAYLLKE LRHVF +KG GK ALDRW+SWA Sbjct 286 WALWKNPEDLTTSQHHKLTWIAKTDPALWRAYLLKEGLRHVFKIKGAAGKTALDRWLSWA 345 Query 361 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA 420 RCRIP FVELA+ IKR+R ID ALDH LS LIES NTKIR +TR A+GF +P+ALIA Sbjct 346 VRCRIPAFVELASTIKRNRTEIDNALDHNLSNALIESINTKIRRITRTAYGFTNPEALIA 405 Query 421 LAMLTLAGHRPTLPGRHNH 439 LA+L +GHRP LPGR H Sbjct 406 LALLAHSGHRPQLPGRTTH 424 >gi|258654218|ref|YP_003203374.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Nakamurella multipartita DSM 44233] gi|258557443|gb|ACV80385.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Nakamurella multipartita DSM 44233] Length=433 Score = 439 bits (1129), Expect = 4e-121, Method: Compositional matrix adjust. Identities = 239/421 (57%), Positives = 293/421 (70%), Gaps = 7/421 (1%) Query 18 VIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYDRGAGLRQWRSLDWGTVE 77 ++ED++ + D ++ RVRP RCGRC R++ WYDRGAG RQWR++D G Sbjct 17 IVEDVDVNDPDL-----IVVRVRPVKRWAGRCGRCRRRSPWYDRGAGRRQWRTVDVGLSR 71 Query 78 VFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWR 137 +EAEAPRV+C HG V VPWARH AGHT FD TVAWLA SKTA +L+RI+WR Sbjct 72 AVVEAEAPRVSCREHGVVVAHVPWARHGAGHTLVFDRTVAWLATQTSKTATTQLLRISWR 131 Query 138 TVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPGHDK 197 TVGAIV+R WAD E+ DR +RR+GIDEISYKR HR+LTVVVDHD+G L+WAAPG D Sbjct 132 TVGAIVSRYWADHERLQDRLREVRRLGIDEISYKRGHRFLTVVVDHDTGHLLWAAPGRDS 191 Query 198 ATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVE 257 ATL FFD LG +R A +THVSAD A +I+ VV +RCP+A++CADPFHVV WAT+ALD Sbjct 192 ATLHQFFDLLGPDRCALLTHVSADGATYISTVVKQRCPNAVRCADPFHVVGWATDALDKL 251 Query 258 RRRAWNDARAIARTE--PKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQS 315 RR + AR AR + G A + G + + + GAR AL +N EDLTE Q Sbjct 252 RRIVISTARRQARRAAVDRIAGGSSPVVTAGQAGADLVKGMAGARSALLRNSEDLTENQQ 311 Query 316 AKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARI 375 KLAWIA TDP L+RAYLLKE LR +F + E+ AL+ WI+WA+ I +F LA RI Sbjct 312 VKLAWIALTDPDLHRAYLLKEGLRLIFKLPVEQAATALENWITWARTAGIGLFSSLAKRI 371 Query 376 KRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPG 435 RHR +I AA++H +S G +ES N KIRL+TR+AFGF SP ALIALAML L GHRP LPG Sbjct 372 TRHRASILAAIEHHMSNGRVESVNAKIRLITRVAFGFASPHALIALAMLRLGGHRPALPG 431 Query 436 R 436 R Sbjct 432 R 432 >gi|258651670|ref|YP_003200826.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Nakamurella multipartita DSM 44233] gi|258655426|ref|YP_003204582.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Nakamurella multipartita DSM 44233] gi|258554895|gb|ACV77837.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Nakamurella multipartita DSM 44233] gi|258558651|gb|ACV81593.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Nakamurella multipartita DSM 44233] Length=433 Score = 433 bits (1114), Expect = 3e-119, Method: Compositional matrix adjust. Identities = 226/381 (60%), Positives = 271/381 (72%), Gaps = 2/381 (0%) Query 58 WYDRGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVA 117 WYDRGAG RQWR++D G +EAEAPRV+C HG V VPWARH AGHT FD TVA Sbjct 52 WYDRGAGRRQWRTVDVGLSRAVVEAEAPRVSCREHGVVVAHVPWARHGAGHTLVFDRTVA 111 Query 118 WLAVACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYL 177 WLA SKTA +L+RI+WRTVGAIV+R WAD E+ DR +RR+GIDEISYKR HR+L Sbjct 112 WLATQTSKTATTQLLRISWRTVGAIVSRYWADHERLQDRLRGVRRLGIDEISYKRGHRFL 171 Query 178 TVVVDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDA 237 TVVVDHD+G L+WAAPG D ATL FFD LG +R A +THVSAD A +I+ VV +RCP+A Sbjct 172 TVVVDHDTGHLLWAAPGRDSATLHQFFDLLGPDRCALLTHVSADGATYISTVVKQRCPNA 231 Query 238 IQCADPFHVVAWATEALDVERRRAWNDARAIARTEP--KWGRGRPGKNAAPRPGRERARR 295 ++CADPFHVV WAT+ALD RR + AR AR + G A + G + + Sbjct 232 VRCADPFHVVGWATDALDKLRRIVISTARRQARRAAVDRIAGGSSPVVTAGQAGADLVKG 291 Query 296 LKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDR 355 + GAR AL +N EDLTE Q KLAWIA TDP L+RAYLLKE LR +F + E+ AL+ Sbjct 292 MAGARSALLRNSEDLTENQQVKLAWIALTDPDLHRAYLLKEGLRLIFKLPVEQAATALEN 351 Query 356 WISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSP 415 WI+WA+ I +F LA RI RHR +I AA++H +S G +ES N KIRL+TR+AFGF SP Sbjct 352 WITWARTAGIGLFSSLAKRITRHRASILAAIEHHMSNGRVESVNAKIRLITRVAFGFASP 411 Query 416 QALIALAMLTLAGHRPTLPGR 436 ALIALAML L GHRP LPGR Sbjct 412 HALIALAMLRLGGHRPALPGR 432 >gi|258655481|ref|YP_003204637.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Nakamurella multipartita DSM 44233] gi|258558706|gb|ACV81648.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Nakamurella multipartita DSM 44233] Length=433 Score = 428 bits (1101), Expect = 9e-118, Method: Compositional matrix adjust. Identities = 224/381 (59%), Positives = 269/381 (71%), Gaps = 2/381 (0%) Query 58 WYDRGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVA 117 WYDRGAG RQWR++D G +EAEAPRV+C HG V VPWARH AG T FD TVA Sbjct 52 WYDRGAGRRQWRTVDVGLSRAVVEAEAPRVSCREHGVVVAHVPWARHGAGQTLVFDRTVA 111 Query 118 WLAVACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYL 177 WLA SKTA +L+RI+WRTVGAI +R WAD E+ DR +RR+GIDEISYKR HR+L Sbjct 112 WLATQTSKTATTQLLRISWRTVGAIESRYWADHERLQDRLRGVRRLGIDEISYKRGHRFL 171 Query 178 TVVVDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDA 237 TVVVDHD+G L+WAAPG D ATL FFD LG +R A +THVSAD A +I+ VV +RCP+A Sbjct 172 TVVVDHDTGHLLWAAPGRDSATLHQFFDLLGPDRCALLTHVSADGATYISTVVKQRCPNA 231 Query 238 IQCADPFHVVAWATEALDVERRRAWNDARAIARTEP--KWGRGRPGKNAAPRPGRERARR 295 ++CADPFHVV WAT+ALD RR + AR AR + G A + G + + Sbjct 232 VRCADPFHVVGWATDALDKLRRIVISTARRQARRAAVDRIAGGSSPVVTAGQAGADLVKG 291 Query 296 LKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDR 355 + GAR AL +N EDLTE Q KLAWIA TDP L+RAYLLKE LR +F + E+ AL+ Sbjct 292 MAGARSALLRNSEDLTENQQVKLAWIALTDPDLHRAYLLKEGLRLIFKLPVEQAATALEN 351 Query 356 WISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSP 415 WI+WA+ I +F LA RI RHR +I AA++H +S G +ES N KIRL+TR+AFGF SP Sbjct 352 WITWARTAGIGLFSSLAKRITRHRASILAAIEHHMSNGRVESVNAKIRLITRVAFGFASP 411 Query 416 QALIALAMLTLAGHRPTLPGR 436 ALIALAML L GHRP LPGR Sbjct 412 HALIALAMLRLGGHRPALPGR 432 >gi|119716001|ref|YP_922966.1| transposase, IS204/IS1001/IS1096/IS1165 family protein [Nocardioides sp. JS614] gi|119716741|ref|YP_923706.1| transposase, IS204/IS1001/IS1096/IS1165 family protein [Nocardioides sp. JS614] gi|119717099|ref|YP_924064.1| transposase, IS204/IS1001/IS1096/IS1165 family protein [Nocardioides sp. JS614] 7 more sequence titles Length=432 Score = 404 bits (1037), Expect = 2e-110, Method: Compositional matrix adjust. Identities = 229/437 (53%), Positives = 286/437 (66%), Gaps = 7/437 (1%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 +R+V L+R LLG++ TVIE +E + D+ ++ VRP + RCGRC A+ YD Sbjct 1 MRDVSLWRCLLGLED-TVIEGVELDRDERV----LVVAVRPMARRRGRCGRCRAPAAGYD 55 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 G G R+WR+LD TV V+LEA++PRV C HG V VPWARH A T+AF+D VAWL Sbjct 56 AGRGRRRWRALDSATVRVYLEADSPRVRCRAHGVVVAHVPWARHRARATHAFEDQVAWLV 115 Query 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 S + V ELMR++WRTV I+ RVW R+D L RIGIDE+S++RH RYL V Sbjct 116 TKTSLSTVAELMRVSWRTVSGILTRVWNQIAARVDLLDGLTRIGIDEVSWRRHQRYLLAV 175 Query 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 V+HD+GRLVW G+ AT+ FFDALG R AQITH+SADAA +IA + CP A++ Sbjct 176 VNHDTGRLVWVGKGNTTATVQSFFDALGPHRCAQITHISADAAPYIAKSTAKNCPQAVRV 235 Query 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGR-PGKNAAPRPGRERARRLKGA 299 ADPFHVV WA +AL R W + R IAR + GRGR P P +R R L + Sbjct 236 ADPFHVVKWANDALGEVRLEVWRETRRIARANSR-GRGRAPADVQEEFPAYQRLRILTRS 294 Query 300 RYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISW 359 RYALWKNPE+LT Q A+L WIAKTDPRL+RAY LKE LR V + E + A+D W Sbjct 295 RYALWKNPENLTTHQQARLDWIAKTDPRLWRAYQLKEGLRAVLRLPAAEARIAIDAWCRS 354 Query 360 AQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALI 419 A+RCRI FV+LA + R I AA++HGLS + ES NT+IRL RIAFG + P ALI Sbjct 355 ARRCRIAQFVDLARMVAEQRGPILAAIEHGLSNAISESVNTRIRLRNRIAFGIKDPDALI 414 Query 420 ALAMLTLAGHRPTLPGR 436 +L MLTL+GH P LPGR Sbjct 415 SLLMLTLSGHTPALPGR 431 >gi|289761468|ref|ZP_06520846.1| transposase [Mycobacterium tuberculosis GM 1503] gi|289708974|gb|EFD72990.1| transposase [Mycobacterium tuberculosis GM 1503] Length=251 Score = 399 bits (1025), Expect = 5e-109, Method: Compositional matrix adjust. Identities = 206/225 (92%), Positives = 207/225 (92%), Gaps = 2/225 (0%) Query 220 ADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGR 279 ADA WIADV + PDAI FHVVAWATE RRAWNDARAIARTEPKWGRGR Sbjct 29 ADARTWIADV-SRALPDAIHRRS-FHVVAWATERSTSSGRRAWNDARAIARTEPKWGRGR 86 Query 280 PGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLR 339 PGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLR Sbjct 87 PGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLR 146 Query 340 HVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTN 399 HVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTN Sbjct 147 HVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTN 206 Query 400 TKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ 444 TKIRLLTRIAFGFRSPQALIALAMLTLAGHRPT PGRHNHPQISQ Sbjct 207 TKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTRPGRHNHPQISQ 251 >gi|31792507|ref|NP_855000.1| hypothetical protein Mb1346c [Mycobacterium bovis AF2122/97] gi|31794971|ref|NP_857464.1| transposase [Mycobacterium bovis AF2122/97] gi|121637243|ref|YP_977466.1| putative transposase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|31618096|emb|CAD94207.1| POSSIBLE TRANSPOSASE [FIRST PART] [Mycobacterium bovis AF2122/97] gi|31620569|emb|CAD96013.1| PUTATIVE TRANSPOSASE [FIRST PART] [Mycobacterium bovis AF2122/97] gi|121492890|emb|CAL71361.1| Possible transposase [first part] [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|341601261|emb|CCC63934.1| possible transposase [first part] [Mycobacterium bovis BCG str. Moreau RDJ] Length=205 Score = 391 bits (1004), Expect = 2e-106, Method: Compositional matrix adjust. Identities = 194/200 (97%), Positives = 195/200 (98%), Gaps = 0/200 (0%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 +RNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD Sbjct 1 MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA Sbjct 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 Query 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV Sbjct 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 Query 181 VDHDSGRLVWAAPGHDKATL 200 VDHDSGRLVWAAP H L Sbjct 181 VDHDSGRLVWAAPSHPGLVL 200 >gi|289569325|ref|ZP_06449552.1| transposase [Mycobacterium tuberculosis T17] gi|289572048|ref|ZP_06452275.1| transposase [Mycobacterium tuberculosis T17] gi|289748323|ref|ZP_06507701.1| transposase [Mycobacterium tuberculosis T92] gi|289749870|ref|ZP_06509248.1| transposase [Mycobacterium tuberculosis T92] gi|289543079|gb|EFD46727.1| transposase [Mycobacterium tuberculosis T17] gi|289545802|gb|EFD49450.1| transposase [Mycobacterium tuberculosis T17] gi|289688910|gb|EFD56339.1| transposase [Mycobacterium tuberculosis T92] gi|289690457|gb|EFD57886.1| transposase [Mycobacterium tuberculosis T92] Length=205 Score = 388 bits (996), Expect = 1e-105, Method: Compositional matrix adjust. Identities = 193/200 (97%), Positives = 194/200 (97%), Gaps = 0/200 (0%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 +RNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD Sbjct 1 MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAV WARHHAGHTYAFDDTVAWLA Sbjct 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVAWARHHAGHTYAFDDTVAWLA 120 Query 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV Sbjct 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 Query 181 VDHDSGRLVWAAPGHDKATL 200 VDHDSGRLVWAAP H L Sbjct 181 VDHDSGRLVWAAPSHPGLVL 200 >gi|111019752|ref|YP_702724.1| transposase [Rhodococcus jostii RHA1] gi|110819282|gb|ABG94566.1| probable transposase [Rhodococcus jostii RHA1] Length=643 Score = 345 bits (885), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 195/437 (45%), Positives = 256/437 (59%), Gaps = 27/437 (6%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 +R R+ + LLG+D+ +I D+ F +D+ G ++ + P ++V RC C ++ YD Sbjct 233 LRAARILQKLLGIDRARII-DVAFTDDERGPA--IVVTLEPHASVRSRCPHCEQRCPGYD 289 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 R RQWR LD G + F+ A R+ CP HG VPWAR A T AFDD VAWLA Sbjct 290 RPNRPRQWRHLDMGGMRCFVRASVSRIRCPDHGVVTEMVPWARPAANMTRAFDDNVAWLA 349 Query 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 T+VCE R+AWR+V IV RV D R DR LRR+GIDEI+Y++ HRYLTVV Sbjct 350 AHSPATSVCEYARVAWRSVTRIVTRVVGDAVGRTDRLQGLRRLGIDEIAYRKGHRYLTVV 409 Query 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 VDHD+GRLVWAA GH+++TL FFD LG ER A++TH+SADAA WIA V R P +C Sbjct 410 VDHDTGRLVWAAEGHNESTLNRFFDELGEERTARLTHISADAAKWIASTVRSRAPQVKRC 469 Query 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 DPFHV+ W T ALD R +R ++R WG +R RR R Sbjct 470 MDPFHVIQWMTRALDRLR------SRVLSRL---WG------------FTDRDRR--HLR 506 Query 301 YALWKNPEDLTERQ-SAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISW 359 +AL KN E+L Q S + + + L R Y++KE L+HV+S + L W Sbjct 507 WALLKNVENLNPAQISVRAKILEDRNSELCRGYVMKEQLQHVYSGSKKRASARLRAWRQM 566 Query 360 AQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALI 419 AQ RIP V LA I R+R I A+++ LS +E+ NT +R LT+ ++GFRSP+ALI Sbjct 567 AQDSRIPELVGLAKSIARYRREILNAIEYDLSNARVEANNTHLRSLTKRSYGFRSPEALI 626 Query 420 ALAMLTLAGHRPTLPGR 436 A+A LT G P LP R Sbjct 627 AMATLTRGGACPALPQR 643 >gi|323717464|gb|EGB26667.1| transposase [Mycobacterium tuberculosis CDC1551A] Length=158 Score = 319 bits (818), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 158/158 (100%), Positives = 158/158 (100%), Gaps = 0/158 (0%) Query 287 RPGRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKG 346 RPGRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKG Sbjct 1 RPGRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKG 60 Query 347 EEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLT 406 EEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLT Sbjct 61 EEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLT 120 Query 407 RIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ 444 RIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ Sbjct 121 RIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ 158 >gi|323720270|gb|EGB29369.1| transposase [Mycobacterium tuberculosis CDC1551A] Length=158 Score = 316 bits (810), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 157/158 (99%), Positives = 157/158 (99%), Gaps = 0/158 (0%) Query 287 RPGRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKG 346 RPGRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKG Sbjct 1 RPGRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKG 60 Query 347 EEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLT 406 EEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLT Sbjct 61 EEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLT 120 Query 407 RIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ 444 RIAFGFRSPQALIALAMLTLAGHRPT PGRHNHPQISQ Sbjct 121 RIAFGFRSPQALIALAMLTLAGHRPTRPGRHNHPQISQ 158 >gi|308406252|ref|ZP_07495711.2| hypothetical protein TMLG_00291 [Mycobacterium tuberculosis SUMu012] gi|308363943|gb|EFP52794.1| hypothetical protein TMLG_00291 [Mycobacterium tuberculosis SUMu012] Length=156 Score = 315 bits (807), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 156/156 (100%), Positives = 156/156 (100%), Gaps = 0/156 (0%) Query 289 GRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEE 348 GRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEE Sbjct 1 GRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEE 60 Query 349 GKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRI 408 GKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRI Sbjct 61 GKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRI 120 Query 409 AFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ 444 AFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ Sbjct 121 AFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ 156 >gi|308379624|ref|ZP_07486938.2| hypothetical protein TMJG_01053 [Mycobacterium tuberculosis SUMu010] gi|308356351|gb|EFP45202.1| hypothetical protein TMJG_01053 [Mycobacterium tuberculosis SUMu010] Length=151 Score = 306 bits (784), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 151/151 (100%), Positives = 151/151 (100%), Gaps = 0/151 (0%) Query 294 RRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQAL 353 RRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQAL Sbjct 1 RRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQAL 60 Query 354 DRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFR 413 DRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFR Sbjct 61 DRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFR 120 Query 414 SPQALIALAMLTLAGHRPTLPGRHNHPQISQ 444 SPQALIALAMLTLAGHRPTLPGRHNHPQISQ Sbjct 121 SPQALIALAMLTLAGHRPTLPGRHNHPQISQ 151 >gi|308373828|ref|ZP_07433768.2| hypothetical protein TMFG_02033 [Mycobacterium tuberculosis SUMu006] gi|308343991|gb|EFP32842.1| hypothetical protein TMFG_02033 [Mycobacterium tuberculosis SUMu006] Length=149 Score = 300 bits (767), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 148/149 (99%), Positives = 148/149 (99%), Gaps = 0/149 (0%) Query 296 LKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDR 355 LKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDR Sbjct 1 LKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDR 60 Query 356 WISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSP 415 WISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSP Sbjct 61 WISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSP 120 Query 416 QALIALAMLTLAGHRPTLPGRHNHPQISQ 444 QALIALAMLTLAGHRPT PGRHNHPQISQ Sbjct 121 QALIALAMLTLAGHRPTRPGRHNHPQISQ 149 >gi|308380042|ref|ZP_07488479.2| hypothetical protein TMKG_01813 [Mycobacterium tuberculosis SUMu011] gi|308362843|gb|EFP51694.1| hypothetical protein TMKG_01813 [Mycobacterium tuberculosis SUMu011] Length=146 Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 146/146 (100%), Positives = 146/146 (100%), Gaps = 0/146 (0%) Query 299 ARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWIS 358 ARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWIS Sbjct 1 ARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWIS 60 Query 359 WAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQAL 418 WAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQAL Sbjct 61 WAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQAL 120 Query 419 IALAMLTLAGHRPTLPGRHNHPQISQ 444 IALAMLTLAGHRPTLPGRHNHPQISQ Sbjct 121 IALAMLTLAGHRPTLPGRHNHPQISQ 146 >gi|262200390|ref|YP_003271598.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia bronchialis DSM 43247] gi|262083737|gb|ACY19705.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia bronchialis DSM 43247] Length=406 Score = 292 bits (748), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 177/434 (41%), Positives = 228/434 (53%), Gaps = 30/434 (6%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 +R + + +L +D ++ED+ EE V+ VR + RCG CGR+ YD Sbjct 1 MRMSSVVQKVLTID--AIVEDVTLEETTVDPDGMVVVSVRAYARDRSRCGECGRRCPGYD 58 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 + + R+WR LD L A RV C HG AVPWAR A T AFDD AWLA Sbjct 59 QVSARRRWRHLDVAGRRCVLAASLRRVRCTVHGVVTEAVPWARPRARFTRAFDDMAAWLA 118 Query 121 VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV 180 + +AV + +R+AWRTV IV RV D IDR L +GIDEI+Y++ HRYLTVV Sbjct 119 AHATVSAVTQFLRVAWRTVSGIVERVVDDHFAGIDRLDGLVNVGIDEIAYRKGHRYLTVV 178 Query 181 VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC 240 ++HD+G +VWA G D A LG FFDALGAERAA I VSAD A+WI VT R P AIQC Sbjct 179 INHDTGLIVWAKEGRDSAVLGEFFDALGAERAAMIEKVSADGAEWIWSAVTTRAPHAIQC 238 Query 241 ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR 300 D FH++ WA +D RR RT G G KGA Sbjct 239 LDVFHLIQWAGAMVDKVRR----------RTVATHGGG------------------KGAM 270 Query 301 YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA 360 +A+ K+ D + Q + + + LY AY+LKE LR KG L +WA Sbjct 271 WAVRKSHGDQSPEQRGIVEQLRADNSDLYEAYMLKEQLREAIRSKGRRRLVLLTGVQAWA 330 Query 361 QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA 420 + IP L + + I AL H +S E+TNT +R LT+ A+GF +P+ALIA Sbjct 331 RASDIPEIAALGRTLDLYNTRIRNALRHNISNARSEATNTHLRALTKRAYGFHTPEALIA 390 Query 421 LAMLTLAGHRPTLP 434 +A LT G P LP Sbjct 391 MAELTRGGACPELP 404 >gi|294995288|ref|ZP_06800979.1| transposase [Mycobacterium tuberculosis 210] Length=145 Score = 292 bits (747), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 144/145 (99%), Positives = 145/145 (100%), Gaps = 0/145 (0%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 +RNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD Sbjct 1 MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA Sbjct 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 Query 121 VACSKTAVCELMRIAWRTVGAIVAR 145 VACSKTAVCELMRIAWRTVGAIVAR Sbjct 121 VACSKTAVCELMRIAWRTVGAIVAR 145 >gi|84495582|ref|ZP_00994701.1| IS1557, transposase [Janibacter sp. HTCC2649] gi|84498150|ref|ZP_00996947.1| IS1557, transposase [Janibacter sp. HTCC2649] gi|84381650|gb|EAP97533.1| IS1557, transposase [Janibacter sp. HTCC2649] gi|84385075|gb|EAQ00955.1| IS1557, transposase [Janibacter sp. HTCC2649] Length=336 Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 163/343 (48%), Positives = 207/343 (61%), Gaps = 20/343 (5%) Query 99 VPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWRTVGAIVARVWAD--TEKRIDR 156 VPWARH A HT AF+D AW A S TAV L+R AWRT+G+IV RV AD D Sbjct 5 VPWARHGARHTTAFEDMAAWAATQMSITAVTTLLRCAWRTIGSIVTRVLADRRAASGSDG 64 Query 157 FANLRRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQIT 216 LRRIGIDE++Y+R RYL VVVDHD+GRLVW K T+ FF ALG ER A +T Sbjct 65 LDGLRRIGIDEVAYRRGRRYLVVVVDHDTGRLVWVGSRARKETVNQFFVALGPERTAHLT 124 Query 217 HVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVERRRAWNDARAIARTEPKWG 276 HV++D+A WIA V E P AI CADPFH+V WA +ALD RR+ WN R Sbjct 125 HVTSDSASWIASPVAEHAPKAIHCADPFHIVQWAGDALDACRRQVWNSVRI--------- 175 Query 277 RGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKE 336 R + G AA G +K + L NP+ ++ ++W+A T P L+RA+ LKE Sbjct 176 RQKRGSGAATGAGVP----VKNIMWTLRMNPDRWGDQHVESMSWLAATHPDLHRAWQLKE 231 Query 337 SLRHVFSV-----KGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLS 391 +LR VF+ +G + L+ W + A ++ F+ELA +I HR IDAAL GL+ Sbjct 232 ALRAVFATGTGNDRGVTAMELLESWTAHALASQLEPFIELALKITAHRKTIDAALTSGLN 291 Query 392 QGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLP 434 L ES N KIR++TR A+GF + ALIALAML+L +RPT P Sbjct 292 NALTESANNKIRVITRRAYGFHNVDALIALAMLSLGIYRPTNP 334 >gi|308378902|ref|ZP_07484255.2| hypothetical protein TMJG_03956 [Mycobacterium tuberculosis SUMu010] gi|308358962|gb|EFP47813.1| hypothetical protein TMJG_03956 [Mycobacterium tuberculosis SUMu010] Length=141 Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 141/141 (100%), Positives = 141/141 (100%), Gaps = 0/141 (0%) Query 304 WKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRC 363 WKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRC Sbjct 1 WKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRC 60 Query 364 RIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAM 423 RIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAM Sbjct 61 RIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAM 120 Query 424 LTLAGHRPTLPGRHNHPQISQ 444 LTLAGHRPTLPGRHNHPQISQ Sbjct 121 LTLAGHRPTLPGRHNHPQISQ 141 >gi|134098201|ref|YP_001103862.1| IS1557, transposase [Saccharopolyspora erythraea NRRL 2338] gi|133910824|emb|CAM00937.1| IS1557, transposase [Saccharopolyspora erythraea NRRL 2338] Length=297 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 162/264 (62%), Positives = 190/264 (72%), Gaps = 5/264 (1%) Query 3 NVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYDRG 62 VR++ LLGV V+E + F+E + V R R R C R+ YD G Sbjct 3 GVRVWGRLLGVHA-AVVETVGFDEAEQVVVVGVRVRRRDRDRCGV----CSRRCPRYDAG 57 Query 63 AGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVA 122 G R+WR+LD GTV F+EA+APRV C HG V AVPWARH AGHT AFDDTV WLA Sbjct 58 RGRRRWRALDLGTVRAFVEADAPRVRCHEHGVVVAAVPWARHGAGHTRAFDDTVTWLATT 117 Query 123 CSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVD 182 S+T V +LMRIAW TVG+I++RV AD + ++DR A LRRIGIDEISYK++HRYLTVVVD Sbjct 118 TSRTTVRQLMRIAWPTVGSIISRVRADIDAQVDRLAGLRRIGIDEISYKKNHRYLTVVVD 177 Query 183 HDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCAD 242 HD+GRLVWAA G+DK TL FFDALG +R AQITHVSADAA WIA V + CPDAI+CAD Sbjct 178 HDTGRLVWAAAGNDKPTLATFFDALGPDRCAQITHVSADAAAWIARTVQQYCPDAIRCAD 237 Query 243 PFHVVAWATEALDVERRRAWNDAR 266 PFHVV WAT+ALD RR+AWN AR Sbjct 238 PFHVVKWATDALDAVRRQAWNTAR 261 >gi|291004378|ref|ZP_06562351.1| IS1557, transposase [Saccharopolyspora erythraea NRRL 2338] Length=281 Score = 284 bits (726), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 148/215 (69%), Positives = 170/215 (80%), Gaps = 0/215 (0%) Query 52 CGRKASWYDRGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYA 111 C R+ YD G G R+WR+LD GTV F+EA+APRV C HG V AVPWARH AGHT A Sbjct 31 CSRRCPRYDAGRGRRRWRALDLGTVRAFVEADAPRVRCHEHGVVVAAVPWARHGAGHTRA 90 Query 112 FDDTVAWLAVACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYK 171 FDDTV WLA S+T V +LMRIAW TVG+I++RV AD + ++DR A LRRIGIDEISYK Sbjct 91 FDDTVTWLATTTSRTTVRQLMRIAWPTVGSIISRVRADIDAQVDRLAGLRRIGIDEISYK 150 Query 172 RHHRYLTVVVDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVT 231 ++HRYLTVVVDHD+GRLVWAA G+DK TL FFDALG +R AQITHVSADAA WIA V Sbjct 151 KNHRYLTVVVDHDTGRLVWAAAGNDKPTLATFFDALGPDRCAQITHVSADAAAWIARTVQ 210 Query 232 ERCPDAIQCADPFHVVAWATEALDVERRRAWNDAR 266 + CPDAI+CADPFHVV WAT+ALD RR+AWN AR Sbjct 211 QYCPDAIRCADPFHVVKWATDALDAVRRQAWNTAR 245 >gi|33867237|ref|NP_898795.1| putative transposase [Rhodococcus erythropolis] gi|33669071|gb|AAP74065.1| putative transposase [Rhodococcus erythropolis] Length=419 Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 180/446 (41%), Positives = 230/446 (52%), Gaps = 35/446 (7%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASW-Y 59 +R L LL + K T I D+E +D RV VRP+ +R C C Y Sbjct 1 MRATTLLNRLLPLPKAT-IRDVEIVDD------RVRVAVRPQRHRMR-CPHCDYSTRHRY 52 Query 60 DRGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWL 119 D WR LD G L R+ CP HG AV +AR +G T F+D V WL Sbjct 53 DTRDVDSSWRHLDLGGRVCVLTLRRRRLRCPEHGVLAEAVDFARPGSGFTRDFEDLVVWL 112 Query 120 AVACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTV 179 A K+ V RI WRTVGA+ RV A+ + DRF NL IG+DEIS++RHH+YLT+ Sbjct 113 ATKTDKSTVSVFCRITWRTVGAMCTRVAAE-KLSPDRFTNLVDIGVDEISWRRHHKYLTL 171 Query 180 VVDHDSGRLVWAAPGHDKATLGLFF-DALGAERAAQITHVSADAADWIADVVTERCPDAI 238 + DHD+G +VW G A L FF D L A Q+ VS D V P A Sbjct 172 ISDHDTGTIVWGTEGKSAAALDEFFTDTLPDGAAEQVAAVSMDLGPAYRKSVRAHAPQAT 231 Query 239 QCADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKG 298 C DPFHVV AT ALD RRR W AR ++ ++ A+ KG Sbjct 232 ICFDPFHVVKLATAALDDVRRRQWQLARTLS-------------------DKQIAKTYKG 272 Query 299 ARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFS--VKGEEGKQALDRW 356 AR+AL KNPE+LT +Q + L + + L RAY LKE+LR VF+ + ++ L RW Sbjct 273 ARWALLKNPENLTVKQESTLDALKRHGGALVRAYELKEALRAVFAGDLDADQVHTMLGRW 332 Query 357 ISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQ 416 SWAQRCRIP FV++ I+ HR I AA+ GL+ G E N K+RL+ R A+GF S + Sbjct 333 CSWAQRCRIPQFVKVGRTIREHRDGILAAVTRGLANGRHEGLNNKVRLIIRRAYGFHSAE 392 Query 417 ALIALAMLTLAGHRPTLP---GRHNH 439 +A+ MLT LP G H H Sbjct 393 NALAMVMLTCGPVTLDLPYHMGTHPH 418 >gi|308373106|ref|ZP_07431030.2| hypothetical protein TMEG_01210 [Mycobacterium tuberculosis SUMu005] gi|308338894|gb|EFP27745.1| hypothetical protein TMEG_01210 [Mycobacterium tuberculosis SUMu005] Length=142 Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 130/131 (99%), Positives = 130/131 (99%), Gaps = 0/131 (0%) Query 314 QSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAA 373 QSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAA Sbjct 12 QSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAA 71 Query 374 RIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTL 433 RIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPT Sbjct 72 RIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTR 131 Query 434 PGRHNHPQISQ 444 PGRHNHPQISQ Sbjct 132 PGRHNHPQISQ 142 >gi|308372662|ref|ZP_07429403.2| hypothetical protein TMDG_01536 [Mycobacterium tuberculosis SUMu004] gi|308332661|gb|EFP21512.1| hypothetical protein TMDG_01536 [Mycobacterium tuberculosis SUMu004] Length=135 Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD Sbjct 15 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 74 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA Sbjct 75 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 134 Query 121 V 121 V Sbjct 135 V 135 >gi|308380043|ref|ZP_07488480.2| hypothetical protein TMKG_01814 [Mycobacterium tuberculosis SUMu011] gi|308362820|gb|EFP51671.1| hypothetical protein TMKG_01814 [Mycobacterium tuberculosis SUMu011] Length=137 Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 120/120 (100%), Positives = 120/120 (100%), Gaps = 0/120 (0%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD Sbjct 15 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 74 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA Sbjct 75 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 134 >gi|323720192|gb|EGB29292.1| transposase [Mycobacterium tuberculosis CDC1551A] Length=120 Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 119/120 (99%), Positives = 120/120 (100%), Gaps = 0/120 (0%) Query 1 VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 +RNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD Sbjct 1 MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD 60 Query 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA Sbjct 61 RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA 120 >gi|167969641|ref|ZP_02551918.1| transposase [Mycobacterium tuberculosis H37Ra] Length=134 Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 118/119 (99%), Positives = 118/119 (99%), Gaps = 0/119 (0%) Query 326 PRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAA 385 P LYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAA Sbjct 16 PVLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAA 75 Query 386 LDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ 444 LDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ Sbjct 76 LDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ 134 Lambda K H 0.324 0.136 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 915653111114 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40