BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1317c Length=496 Score E Sequences producing significant alignments: (Bits) Value gi|15608457|ref|NP_215833.1| bifunctional methylated-DNA--protei... 990 0.0 gi|121637247|ref|YP_977470.1| putative ada regulatory protein al... 989 0.0 gi|340626332|ref|YP_004744784.1| putative ADA regulatory protein... 988 0.0 gi|289569327|ref|ZP_06449554.1| ada regulatory protein alkA [Myc... 988 0.0 gi|294994873|ref|ZP_06800564.1| ada regulatory protein alkA [Myc... 987 0.0 gi|254550325|ref|ZP_05140772.1| ada regulatory protein alkA [Myc... 987 0.0 gi|167967589|ref|ZP_02549866.1| Ada regulatory protein alkA [Myc... 860 0.0 gi|183984052|ref|YP_001852343.1| Ada regulatory protein AlkA [My... 823 0.0 gi|31792511|ref|NP_855004.1| methylated-DNA--protein-cysteine me... 821 0.0 gi|342858023|ref|ZP_08714679.1| AraC family transcriptional regu... 817 0.0 gi|118619152|ref|YP_907484.1| Ada regulatory protein AlkA [Mycob... 816 0.0 gi|254774356|ref|ZP_05215872.1| transcriptional regulator, AraC ... 815 0.0 gi|240169498|ref|ZP_04748157.1| Ada regulatory protein AlkA [Myc... 814 0.0 gi|254821320|ref|ZP_05226321.1| transcriptional regulator, AraC ... 811 0.0 gi|296170257|ref|ZP_06851850.1| transcriptional regulator [Mycob... 807 0.0 gi|118463714|ref|YP_880773.1| AraC family transcriptional regula... 799 0.0 gi|336460975|gb|EGO39856.1| adenosine deaminase [Mycobacterium a... 796 0.0 gi|41408541|ref|NP_961377.1| hypothetical protein MAP2443 [Mycob... 795 0.0 gi|120405276|ref|YP_955105.1| alcohol dehydrogenase [Mycobacteri... 754 0.0 gi|118468735|ref|YP_889180.1| transcriptional regulator, Ada fam... 750 0.0 gi|108800834|ref|YP_641031.1| DNA-3-methyladenine glycosylase II... 739 0.0 gi|126436432|ref|YP_001072123.1| DNA-3-methyladenine glycosylase... 735 0.0 gi|333989960|ref|YP_004522574.1| Ada regulatory protein AlkA [My... 726 0.0 gi|289757419|ref|ZP_06516797.1| ada regulatory protein alkA [Myc... 716 0.0 gi|145222914|ref|YP_001133592.1| alcohol dehydrogenase [Mycobact... 692 0.0 gi|284033727|ref|YP_003383658.1| AraC family transcriptional reg... 629 3e-178 gi|291455156|ref|ZP_06594546.1| conserved hypothetical protein [... 619 3e-175 gi|345010136|ref|YP_004812490.1| DNA repair protein and AraC fam... 613 1e-173 gi|297156258|gb|ADI05970.1| transcriptional regulator, AraC fami... 613 2e-173 gi|333023391|ref|ZP_08451455.1| putative transcriptional regulat... 611 7e-173 gi|302522811|ref|ZP_07275153.1| transcriptional regulator [Strep... 610 1e-172 gi|318059732|ref|ZP_07978455.1| ADA-like regulatory protein [Str... 608 6e-172 gi|302537835|ref|ZP_07290177.1| AlkA [Streptomyces sp. C] >gi|30... 606 2e-171 gi|21224767|ref|NP_630546.1| ADA-like regulatory protein [Strept... 604 1e-170 gi|254382197|ref|ZP_04997558.1| conserved hypothetical protein [... 604 1e-170 gi|302529601|ref|ZP_07281943.1| transcriptional regulator [Strep... 601 8e-170 gi|312199339|ref|YP_004019400.1| AraC family transcriptional reg... 601 9e-170 gi|320007535|gb|ADW02385.1| DNA repair protein and transcription... 601 1e-169 gi|291300677|ref|YP_003511955.1| AraC family transcriptional reg... 599 4e-169 gi|345003112|ref|YP_004805966.1| AraC family transcriptional reg... 597 1e-168 gi|297203487|ref|ZP_06920884.1| transcriptional regulator [Strep... 597 2e-168 gi|302557340|ref|ZP_07309682.1| transcriptional regulator, Ada f... 592 6e-167 gi|329940361|ref|ZP_08289642.1| ADA-like regulatory protein [Str... 591 1e-166 gi|297190918|ref|ZP_06908316.1| ada regulatory protein alkA [Str... 590 2e-166 gi|300786794|ref|YP_003767085.1| adenosine deaminase/DNA-3-methy... 586 4e-165 gi|326775510|ref|ZP_08234775.1| DNA repair protein and transcrip... 582 4e-164 gi|29828476|ref|NP_823110.1| ADA-like regulatory protein [Strept... 581 8e-164 gi|328886332|emb|CCA59571.1| Methylated-DNA--protein-cysteinemet... 581 9e-164 gi|182434994|ref|YP_001822713.1| putative ADA-like transcription... 581 9e-164 gi|290956292|ref|YP_003487474.1| ADA-like regulatory protein [St... 578 7e-163 >gi|15608457|ref|NP_215833.1| bifunctional methylated-DNA--protein-cysteine methyltransferase/O-6-methylguanine-DNA transcription regulator [Mycobacterium tuberculosis H37Rv] gi|15840769|ref|NP_335806.1| Ada family transcriptional regulator [Mycobacterium tuberculosis CDC1551] gi|148661105|ref|YP_001282628.1| ada regulatory protein AlkA [Mycobacterium tuberculosis H37Ra] 44 more sequence titles Length=496 Score = 990 bits (2559), Expect = 0.0, Method: Compositional matrix adjust. Identities = 495/496 (99%), Positives = 496/496 (100%), Gaps = 0/496 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +HDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE Sbjct 1 MHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL Sbjct 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT Sbjct 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR Sbjct 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR Sbjct 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT Sbjct 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP Sbjct 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT Sbjct 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 Query 481 TLEHPVNQWPPQEKIA 496 TLEHPVNQWPPQEKIA Sbjct 481 TLEHPVNQWPPQEKIA 496 >gi|121637247|ref|YP_977470.1| putative ada regulatory protein alkA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989721|ref|YP_002644408.1| putative ada regulatory protein [Mycobacterium bovis BCG str. Tokyo 172] gi|289442758|ref|ZP_06432502.1| ada regulatory protein alkA [Mycobacterium tuberculosis T46] 23 more sequence titles Length=496 Score = 989 bits (2558), Expect = 0.0, Method: Compositional matrix adjust. Identities = 494/496 (99%), Positives = 496/496 (100%), Gaps = 0/496 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +HDDFERCYRA+QSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE Sbjct 1 MHDDFERCYRAVQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL Sbjct 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT Sbjct 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR Sbjct 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR Sbjct 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT Sbjct 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP Sbjct 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT Sbjct 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 Query 481 TLEHPVNQWPPQEKIA 496 TLEHPVNQWPPQEKIA Sbjct 481 TLEHPVNQWPPQEKIA 496 >gi|340626332|ref|YP_004744784.1| putative ADA regulatory protein [Mycobacterium canettii CIPT 140010059] gi|340004522|emb|CCC43665.1| putative ADA regulatory protein ALKA (regulatory protein of adaptative response) (methylated-DNA--protein-cysteine methyltransferase) (O-6-methylguanine-DNA alkyltransferase) (O-6-methylguanine-DNA methyltransferase) (3-methyladenine DNA glycosylase II) [Mycobacterium canettii CIPT 140010059] Length=496 Score = 988 bits (2555), Expect = 0.0, Method: Compositional matrix adjust. Identities = 493/496 (99%), Positives = 496/496 (100%), Gaps = 0/496 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +HDDFERCYRA+QSKDARFDGWFVVAV+TTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE Sbjct 1 MHDDFERCYRAVQSKDARFDGWFVVAVVTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL Sbjct 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT Sbjct 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR Sbjct 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR Sbjct 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT Sbjct 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP Sbjct 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT Sbjct 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 Query 481 TLEHPVNQWPPQEKIA 496 TLEHPVNQWPPQEKIA Sbjct 481 TLEHPVNQWPPQEKIA 496 >gi|289569327|ref|ZP_06449554.1| ada regulatory protein alkA [Mycobacterium tuberculosis T17] gi|289543081|gb|EFD46729.1| ada regulatory protein alkA [Mycobacterium tuberculosis T17] Length=496 Score = 988 bits (2553), Expect = 0.0, Method: Compositional matrix adjust. Identities = 493/496 (99%), Positives = 495/496 (99%), Gaps = 0/496 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +HDDFERCYRA+QSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE Sbjct 1 MHDDFERCYRAVQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL Sbjct 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT Sbjct 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR Sbjct 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 PWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR Sbjct 241 FPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT Sbjct 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP Sbjct 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT Sbjct 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 Query 481 TLEHPVNQWPPQEKIA 496 TLEHPVNQWPPQEKIA Sbjct 481 TLEHPVNQWPPQEKIA 496 >gi|294994873|ref|ZP_06800564.1| ada regulatory protein alkA [Mycobacterium tuberculosis 210] Length=496 Score = 987 bits (2552), Expect = 0.0, Method: Compositional matrix adjust. Identities = 493/496 (99%), Positives = 495/496 (99%), Gaps = 0/496 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +HDDFERCYR +QSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE Sbjct 1 MHDDFERCYRTVQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL Sbjct 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT Sbjct 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR Sbjct 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR Sbjct 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT Sbjct 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP Sbjct 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT Sbjct 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 Query 481 TLEHPVNQWPPQEKIA 496 TLEHPVNQWPPQEKIA Sbjct 481 TLEHPVNQWPPQEKIA 496 >gi|254550325|ref|ZP_05140772.1| ada regulatory protein alkA [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=496 Score = 987 bits (2551), Expect = 0.0, Method: Compositional matrix adjust. Identities = 494/496 (99%), Positives = 495/496 (99%), Gaps = 0/496 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +HDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE Sbjct 1 MHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL Sbjct 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT Sbjct 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR Sbjct 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR Sbjct 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT Sbjct 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP Sbjct 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT Sbjct 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 Query 481 TLEHPVNQWPPQEKIA 496 TLEHP NQWPPQEKIA Sbjct 481 TLEHPGNQWPPQEKIA 496 >gi|167967589|ref|ZP_02549866.1| Ada regulatory protein alkA [Mycobacterium tuberculosis H37Ra] Length=459 Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/437 (99%), Positives = 435/437 (99%), Gaps = 0/437 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +HDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE Sbjct 1 MHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL Sbjct 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT Sbjct 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR Sbjct 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR Sbjct 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT Sbjct 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP Sbjct 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 Query 421 WTAEVIAMRGLGDPDAF 437 WTAEVIAMRGLGDP F Sbjct 421 WTAEVIAMRGLGDPTPF 437 >gi|183984052|ref|YP_001852343.1| Ada regulatory protein AlkA [Mycobacterium marinum M] gi|183177378|gb|ACC42488.1| Ada regulatory protein AlkA [Mycobacterium marinum M] Length=505 Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/493 (83%), Positives = 439/493 (90%), Gaps = 0/493 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 VH+DFERCYRA+QSKDARFDGWFV AVLTT +YCRPSCPVRPPFARNVRFLPTAAAAQ E Sbjct 11 VHEDFERCYRAVQSKDARFDGWFVTAVLTTRIYCRPSCPVRPPFARNVRFLPTAAAAQRE 70 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWNVR D+VARAMRL+ADGTVDR+GV+GLAA+LGYT RQLERL Sbjct 71 GFRACKRCRPDASPGSPEWNVRGDIVARAMRLVADGTVDREGVTGLAARLGYTTRQLERL 130 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 LQA VGAGPLALARAQRMQTARVLIETT+LPFGDVAFAAGFSSIRQFNDT+RL CD TPT Sbjct 131 LQAEVGAGPLALARAQRMQTARVLIETTDLPFGDVAFAAGFSSIRQFNDTIRLVCDSTPT 190 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 ALR AAARF + S GTVSLRLPVR PFA++GVFGHLAA AVPGCEEVRDGAYRRTLR Sbjct 191 ALRRHAAARFGAPATSPGTVSLRLPVRTPFAYQGVFGHLAAGAVPGCEEVRDGAYRRTLR 250 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 L GNGIV+LTPAPDHVRCLLVLDDFRDL ATARCRRLLDLDADPEA+VEAL DP L Sbjct 251 LSSGNGIVTLTPAPDHVRCLLVLDDFRDLAAATARCRRLLDLDADPEAVVEALRGDPALG 310 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 VV APGQRIPRTVDEAE AVRAVLAQQVSTKAA THA RLV AYGRP+HD+ G LTHT Sbjct 311 PVVATAPGQRIPRTVDEAELAVRAVLAQQVSTKAARTHAARLVTAYGRPIHDQGGTLTHT 370 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPS++ LAEIDP HLAVPK RQRT++ +V ++AD+ + LDAGCDW R R QLL +PGVGP Sbjct 371 FPSVQDLAEIDPIHLAVPKTRQRTLSMMVDAIADRRVNLDAGCDWTRTREQLLDIPGVGP 430 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WTAEVIAMRGLGDPDAFP +DLG+RLAAK+LGLP ++ L SARWRPWRSYATQHLWT Sbjct 431 WTAEVIAMRGLGDPDAFPVADLGVRLAAKQLGLPQRQPGLLERSARWRPWRSYATQHLWT 490 Query 481 TLEHPVNQWPPQE 493 TLEH VN WPP+E Sbjct 491 TLEHSVNDWPPRE 503 >gi|31792511|ref|NP_855004.1| methylated-DNA--protein-cysteine methyltransferase [Mycobacterium bovis AF2122/97] gi|31618100|emb|CAD94211.1| PUTATIVE ADA REGULATORY PROTEIN ALKAb [SECOND PART] (Regulatory protein of adaptative response) : Methylated-DNA--protein-cysteine methyltransferase (O-6-methylguanine-DNA alkyltransferase) [Mycobacterium bovis AF2122/97] Length=416 Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/416 (99%), Positives = 416/416 (100%), Gaps = 0/416 (0%) Query 81 VRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERLLQAVVGAGPLALARAQRMQT 140 +RSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERLLQAVVGAGPLALARAQRMQT Sbjct 1 MRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERLLQAVVGAGPLALARAQRMQT 60 Query 141 ARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPTALRARAAARFESATASAGTV 200 ARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPTALRARAAARFESATASAGTV Sbjct 61 ARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPTALRARAAARFESATASAGTV 120 Query 201 SLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLRLPWGNGIVSLTPAPDHVRCL 260 SLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLRLPWGNGIVSLTPAPDHVRCL Sbjct 121 SLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLRLPWGNGIVSLTPAPDHVRCL 180 Query 261 LVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLRAVVGKAPGQRIPRTVDEAEF 320 LVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLRAVVGKAPGQRIPRTVDEAEF Sbjct 181 LVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLRAVVGKAPGQRIPRTVDEAEF 240 Query 321 AVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHTFPSIEQLAEIDPGHLAVPKA 380 AVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHTFPSIEQLAEIDPGHLAVPKA Sbjct 241 AVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHTFPSIEQLAEIDPGHLAVPKA 300 Query 381 RQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGPWTAEVIAMRGLGDPDAFPAS 440 RQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGPWTAEVIAMRGLGDPDAFPAS Sbjct 301 RQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGPWTAEVIAMRGLGDPDAFPAS 360 Query 441 DLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWTTLEHPVNQWPPQEKIA 496 DLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWTTLEHPVNQWPPQEKIA Sbjct 361 DLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWTTLEHPVNQWPPQEKIA 416 >gi|342858023|ref|ZP_08714679.1| AraC family transcriptional regulator [Mycobacterium colombiense CECT 3035] gi|342135356|gb|EGT88522.1| AraC family transcriptional regulator [Mycobacterium colombiense CECT 3035] Length=495 Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/493 (83%), Positives = 436/493 (89%), Gaps = 0/493 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +HDDFERCYRA+QSKDARFDGWFV AVLTT +YCRPSCPVRPPFARNVRF PTAAAAQ Sbjct 1 MHDDFERCYRAVQSKDARFDGWFVTAVLTTRIYCRPSCPVRPPFARNVRFYPTAAAAQRA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWNVR DVVAR MRLIADGTVDR+GV GLAA+LGYT RQLERL Sbjct 61 GFRACKRCRPDASPGSPEWNVRGDVVARTMRLIADGTVDREGVGGLAARLGYTTRQLERL 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 LQA VGAGPLALARAQR QTARVLIETT+LPFGDVAFAAGFSSIRQFNDTVR + TP+ Sbjct 121 LQAEVGAGPLALARAQRAQTARVLIETTDLPFGDVAFAAGFSSIRQFNDTVRAVFENTPS 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 ALR RAA R S S GTV LRLPVR PF + GVFGHLAA VPGCEE+RDGAYRRTLR Sbjct 181 ALRQRAATRSASTPNSPGTVCLRLPVRTPFGYAGVFGHLAAGTVPGCEEIRDGAYRRTLR 240 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP+GN IVSLTPA DHVRC+LVLDDFRDL TA ARCRRLLDLDADPEA+ EAL D + Sbjct 241 LPFGNAIVSLTPAVDHVRCVLVLDDFRDLTTAIARCRRLLDLDADPEAVDEALSRDAEFC 300 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 AVV KAPGQRIPRTVDEAE AVRAVL QQVSTKAASTHAGRLVAAYGRP++D G LTHT Sbjct 301 AVVAKAPGQRIPRTVDEAELAVRAVLGQQVSTKAASTHAGRLVAAYGRPINDPGGTLTHT 360 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPS+EQLA+IDP HLAVP++RQRT++ALV +LAD S+VL AGCDW AR QLLALPGVGP Sbjct 361 FPSVEQLADIDPVHLAVPRSRQRTLSALVGALADGSVVLSAGCDWGSARTQLLALPGVGP 420 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WTAEVIAMRGLGDPDAFPASDLGLRLAA++LGLP+ R+L SA+WRPWRSYATQ+LWT Sbjct 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAEQLGLPSDERSLIARSAQWRPWRSYATQYLWT 480 Query 481 TLEHPVNQWPPQE 493 TLEHPVNQWPPQE Sbjct 481 TLEHPVNQWPPQE 493 >gi|118619152|ref|YP_907484.1| Ada regulatory protein AlkA [Mycobacterium ulcerans Agy99] gi|118571262|gb|ABL06013.1| Ada regulatory protein AlkA [Mycobacterium ulcerans Agy99] Length=495 Score = 816 bits (2107), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/493 (82%), Positives = 437/493 (89%), Gaps = 0/493 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +H+DFERCYRA+QSKDARFDGWFV AVLTT +YCRPSCPVRPPFARNVRFLPTAAAAQ E Sbjct 1 MHEDFERCYRAVQSKDARFDGWFVTAVLTTRIYCRPSCPVRPPFARNVRFLPTAAAAQRE 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWN+R D+VARAMRL+ADGTVDR+GV+GLAA+LGYT RQLERL Sbjct 61 GFRACKRCRPDASPGSPEWNMRGDIVARAMRLVADGTVDREGVTGLAARLGYTTRQLERL 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 LQA VGAGPLALARAQRMQTARVLIETT+LPFGDVAFAAGFSSIRQFNDT+RL CD TPT Sbjct 121 LQAEVGAGPLALARAQRMQTARVLIETTDLPFGDVAFAAGFSSIRQFNDTIRLVCDSTPT 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 ALR AAARF + S GTVSLRLPVR PFA++GVFGHLAA AVPGCEEVRDGAYRRTLR Sbjct 181 ALRRHAAARFGAPATSPGTVSLRLPVRTPFAYQGVFGHLAAGAVPGCEEVRDGAYRRTLR 240 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 L GNGIV+LTPAPDHVRCLLVLDDFRDL ATARCRRLLDL ADPEA+VEAL DP L Sbjct 241 LSSGNGIVTLTPAPDHVRCLLVLDDFRDLAAATARCRRLLDLGADPEAVVEALSGDPALS 300 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 VV APGQRIPRTVDEAE AVRAVLAQQVSTKAA THA RLV AYGRP+HD+ G LTHT Sbjct 301 PVVATAPGQRIPRTVDEAELAVRAVLAQQVSTKAARTHAARLVTAYGRPIHDQGGTLTHT 360 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPS++ LAEIDP HL VPK RQRT++ +V ++AD+ + LDAG DW RAR QLL +PGVGP Sbjct 361 FPSVQDLAEIDPIHLVVPKTRQRTLSMMVDAIADRRVNLDAGFDWTRAREQLLDIPGVGP 420 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WTAEVIAMRGLGDPDAFP +DLG+RLAAK+LGLP ++ L SARWRPWRSYATQHLWT Sbjct 421 WTAEVIAMRGLGDPDAFPVADLGVRLAAKQLGLPQRQPDLLDRSARWRPWRSYATQHLWT 480 Query 481 TLEHPVNQWPPQE 493 TLEH VN WPP+E Sbjct 481 TLEHSVNDWPPRE 493 >gi|254774356|ref|ZP_05215872.1| transcriptional regulator, AraC family protein [Mycobacterium avium subsp. avium ATCC 25291] Length=499 Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/493 (83%), Positives = 433/493 (88%), Gaps = 0/493 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +HDDFERCYRA+QSKDARFDGWFV AVLTTG+YCRPSCPVRPPFARNVRF PTAAAAQ Sbjct 1 MHDDFERCYRAVQSKDARFDGWFVTAVLTTGIYCRPSCPVRPPFARNVRFYPTAAAAQRA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWNVR DVVAR MRLIADGTVDRDGV GLAA+LGYT RQLERL Sbjct 61 GFRACKRCRPDASPGSPEWNVRGDVVARTMRLIADGTVDRDGVGGLAARLGYTTRQLERL 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 LQA VGAGPLALARAQR QTARVLIETT LPFGDVAFAAGFSSIRQFNDTVR + P+ Sbjct 121 LQAEVGAGPLALARAQRAQTARVLIETTELPFGDVAFAAGFSSIRQFNDTVRAVFESPPS 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 LR RA+AR S S G V LRLPVR PF F+GVFGHLAA+ VPGCEEVRDGAYRRTLR Sbjct 181 VLRRRASARCASTANSPGAVCLRLPVRTPFGFQGVFGHLAASVVPGCEEVRDGAYRRTLR 240 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 L +G GIV+LTPA DHVRC LVLDDFRDL A ARCRRLLDLDADPEA+ EAL ADP L Sbjct 241 LGFGTGIVTLTPAADHVRCELVLDDFRDLTAAIARCRRLLDLDADPEAVDEALAADPQLA 300 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 V KAPGQRIPRTVDEAE AVRAVL QQVS +AA THAGRLVAAYGR VHD G LTHT Sbjct 301 PAVRKAPGQRIPRTVDEAELAVRAVLGQQVSIRAARTHAGRLVAAYGRAVHDPEGTLTHT 360 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPS++QLA++DP HLAVPKARQRT+ ALVASLAD+S+VLD GCDWQ AR QLLALPGVGP Sbjct 361 FPSVQQLADVDPIHLAVPKARQRTLAALVASLADRSIVLDTGCDWQSARTQLLALPGVGP 420 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WTAEVIAMRGLGDPDAFPA+DLGLR+AAK+LGLP+ +R+LT SARWRPWRSYATQ+LWT Sbjct 421 WTAEVIAMRGLGDPDAFPAADLGLRVAAKRLGLPSSQRSLTAASARWRPWRSYATQYLWT 480 Query 481 TLEHPVNQWPPQE 493 TLEHPVN WPPQ+ Sbjct 481 TLEHPVNHWPPQQ 493 >gi|240169498|ref|ZP_04748157.1| Ada regulatory protein AlkA [Mycobacterium kansasii ATCC 12478] Length=505 Score = 814 bits (2103), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/505 (80%), Positives = 447/505 (89%), Gaps = 9/505 (1%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +H+DFERCYRA+Q+KDARFDGWFV+AVLTT +YCRPSCPVRPPFARNVRFLPTAAAAQ E Sbjct 1 MHEDFERCYRAVQAKDARFDGWFVIAVLTTRIYCRPSCPVRPPFARNVRFLPTAAAAQQE 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWN+R DVVARAMRLIADGTVDR+GV+GL+A+LGYT RQL+RL Sbjct 61 GFRACKRCRPDASPGSPEWNIRGDVVARAMRLIADGTVDREGVTGLSARLGYTPRQLQRL 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 L+A VGAGPLALARAQRMQTARVLIETT+LPFG+VAFAAGFSSIRQFNDTVRL CD TPT Sbjct 121 LRAEVGAGPLALARAQRMQTARVLIETTDLPFGEVAFAAGFSSIRQFNDTVRLVCDSTPT 180 Query 181 ALRARAAARFESATASAGT-------VSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDG 233 ALR RAA+R SA + A +SLRLP R PFA+EGVFGHLAA AVPGCEEVR+G Sbjct 181 ALRKRAASRSGSAESGAAVHHAGPAAISLRLPARTPFAYEGVFGHLAAGAVPGCEEVRNG 240 Query 234 AYRRTLRLPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEAL 293 AYRRTLRL G+G+V+LTPA DHVRCLLVLDDFRDL ATARCRRLLDLDADP+A+VEAL Sbjct 241 AYRRTLRLSSGSGLVTLTPALDHVRCLLVLDDFRDLAAATARCRRLLDLDADPDAVVEAL 300 Query 294 GADPDLRAVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDR 353 DP L VV APGQRIPRTVDEAE A+RAVLAQQVSTKAA THAGRLVAAYG+PVHD Sbjct 301 SGDPALAPVVANAPGQRIPRTVDEAELAIRAVLAQQVSTKAARTHAGRLVAAYGQPVHDA 360 Query 354 HGALTHTFPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLL 413 G LTHTFPS+EQL++IDP HLAVP AR+RT++ALV+ LAD + LDAGCDW AR QLL Sbjct 361 AGGLTHTFPSVEQLSQIDPAHLAVPGARRRTLSALVSGLADGRISLDAGCDWTEARSQLL 420 Query 414 ALPGVGPWTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSY 473 ALPGVGPWTAEV+AMRGLGDPDAFPA DLG+RLAA++LGLP QRRAL+ SARWRPWRSY Sbjct 421 ALPGVGPWTAEVVAMRGLGDPDAFPAGDLGVRLAARQLGLPEQRRALSERSARWRPWRSY 480 Query 474 ATQHLWTTLEHPVNQWP--PQEKIA 496 ATQHLWTTLEHPVN WP P +++A Sbjct 481 ATQHLWTTLEHPVNHWPQKPPKEVA 505 >gi|254821320|ref|ZP_05226321.1| transcriptional regulator, AraC family protein [Mycobacterium intracellulare ATCC 13950] Length=495 Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/493 (84%), Positives = 439/493 (90%), Gaps = 0/493 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +HDDF+RCYRA+QSKDARFDGWFV AVLTT +YCRPSCPVRPPFARNVRF PTAAAAQ Sbjct 1 MHDDFDRCYRAVQSKDARFDGWFVTAVLTTRIYCRPSCPVRPPFARNVRFYPTAAAAQRA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWNVR DVVAR MRLIADGTVDRDGV GLAA LGYT RQLERL Sbjct 61 GFRACKRCRPDASPGSPEWNVRGDVVARTMRLIADGTVDRDGVGGLAAHLGYTTRQLERL 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 LQA VGAGPLALARAQR QTARVLIETT+LPFGDVAFAAGFSSIRQFNDTVR +GTP+ Sbjct 121 LQAEVGAGPLALARAQRAQTARVLIETTDLPFGDVAFAAGFSSIRQFNDTVRSVFEGTPS 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 ALR RAAAR S S GTV LRLPVR PFA+EGVFGHLAA AVPGCEEVRDG YRR+LR Sbjct 181 ALRRRAAARTASEANSPGTVCLRLPVRTPFAYEGVFGHLAAGAVPGCEEVRDGGYRRSLR 240 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP+GN IV+LTPA DHVRC+LVLDDFRDL TA ARCRRLLDLDADPEA+ EALGAD LR Sbjct 241 LPFGNAIVNLTPAVDHVRCVLVLDDFRDLTTAIARCRRLLDLDADPEAVDEALGADAGLR 300 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 VV KAPGQRIPRTVDEAE AVRAVL QQVST+AASTHAGRLVAAYGRPV+D G LTHT Sbjct 301 PVVAKAPGQRIPRTVDEAELAVRAVLGQQVSTRAASTHAGRLVAAYGRPVNDAEGTLTHT 360 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPS+E+LAEIDP HLAVPKAR+RT++ALVA LAD S+VLD GCDW AR QLLALPGVGP Sbjct 361 FPSVEELAEIDPVHLAVPKARRRTLSALVAGLADGSIVLDTGCDWDSARRQLLALPGVGP 420 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WTAEVIAMRGLGDPDAFPASDLGLRLAAK+LGLP+ R+L ARWRPWRSYATQ+LWT Sbjct 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKQLGLPSDERSLVERGARWRPWRSYATQYLWT 480 Query 481 TLEHPVNQWPPQE 493 TLEHPVN WPPQE Sbjct 481 TLEHPVNHWPPQE 493 >gi|296170257|ref|ZP_06851850.1| transcriptional regulator [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895133|gb|EFG74851.1| transcriptional regulator [Mycobacterium parascrofulaceum ATCC BAA-614] Length=495 Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/493 (82%), Positives = 432/493 (88%), Gaps = 0/493 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +HDDFERCYRA+QSKDARFDGWFV AVLTT +YCRPSCPVRPPFARNVRF PTAAAAQ Sbjct 1 MHDDFERCYRAVQSKDARFDGWFVTAVLTTRIYCRPSCPVRPPFARNVRFYPTAAAAQRA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWNVR DVVAR MRLIADGTVDR+GV GLAA LGYT RQLERL Sbjct 61 GFRACKRCRPDASPGSPEWNVRGDVVARTMRLIADGTVDREGVGGLAAHLGYTTRQLERL 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 LQA VGAGPLALARAQR QTARVLIETT+LPFGDVAFA+GFSSIRQFNDTVRL + TPT Sbjct 121 LQAEVGAGPLALARAQRAQTARVLIETTDLPFGDVAFASGFSSIRQFNDTVRLVFENTPT 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 LR RAA R S A AGTV LRLPVR PFA+EG+FGHLAA AVP CEE+R GAYRR+LR Sbjct 181 ELRRRAAVRSASGGAPAGTVCLRLPVRTPFAYEGLFGHLAAGAVPACEEIRGGAYRRSLR 240 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP+G +VSLTPA DHVRC+LVLDDFRDL TA ARCRRLLDLDADPEA+ +AL DP LR Sbjct 241 LPFGGAVVSLTPAVDHVRCVLVLDDFRDLTTAIARCRRLLDLDADPEAVDDALSDDPRLR 300 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 AVVGKA GQRIPRTVDE+E AVRAVL QQVSTKAA THAGRLVAAYG+P+ D G LTH Sbjct 301 AVVGKARGQRIPRTVDESELAVRAVLGQQVSTKAAGTHAGRLVAAYGQPIADPDGGLTHA 360 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPS+EQLAEIDP HLAVP AR+RT++ALVA LAD S+VLD+G DW+ AR QLL LPGVGP Sbjct 361 FPSVEQLAEIDPIHLAVPDARRRTLSALVAGLADGSIVLDSGSDWEAARSQLLGLPGVGP 420 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WTAEVIAMRGLGDPDAFPA+DLG RLAAK+LGLP RAL H+ RWRPWRSYATQ+LWT Sbjct 421 WTAEVIAMRGLGDPDAFPATDLGARLAAKRLGLPTDERALVGHATRWRPWRSYATQYLWT 480 Query 481 TLEHPVNQWPPQE 493 TLEHPVNQWPPQE Sbjct 481 TLEHPVNQWPPQE 493 >gi|118463714|ref|YP_880773.1| AraC family transcriptional regulator [Mycobacterium avium 104] gi|118165001|gb|ABK65898.1| transcriptional regulator, AraC family protein [Mycobacterium avium 104] Length=499 Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/493 (82%), Positives = 431/493 (88%), Gaps = 0/493 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +HDDFERCYRA+QSKDARFDGWFV AVLTTG+YCRPSCPVRPPFARNVRF PTAAAAQ Sbjct 1 MHDDFERCYRAVQSKDARFDGWFVTAVLTTGIYCRPSCPVRPPFARNVRFYPTAAAAQRA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWNVR DVVAR MRLIADGTVDRDGV GLAA+LGYT RQLERL Sbjct 61 GFRACKRCRPDASPGSPEWNVRGDVVARTMRLIADGTVDRDGVGGLAARLGYTTRQLERL 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 LQA VGAGPLALARAQR QTARVLIETT LPFGDVAFAAGFSSIRQFNDTVR + P+ Sbjct 121 LQAEVGAGPLALARAQRAQTARVLIETTELPFGDVAFAAGFSSIRQFNDTVRAVFESPPS 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 LR RAAAR S S G V LRLPVR PF F+GVFGHLAA+ VPGCEEVRDGAYRRTLR Sbjct 181 VLRRRAAARCASTANSPGAVCLRLPVRTPFGFQGVFGHLAASVVPGCEEVRDGAYRRTLR 240 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 L +G GIV+LTPA DHVRC LVLDDFRDL A ARCRRLLDLDADPEA+ EA+ ADP L Sbjct 241 LGFGTGIVTLTPAADHVRCELVLDDFRDLTAAIARCRRLLDLDADPEAVDEAVAADPQLA 300 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 V KAPGQRIPRTVDEAE AVRAVL QQVS +AA THAGRLVAAYGR VHD G LTHT Sbjct 301 PAVRKAPGQRIPRTVDEAELAVRAVLGQQVSIRAARTHAGRLVAAYGRAVHDPEGTLTHT 360 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPS++QLA++DP HLAVPKARQRT+ ALVA LAD+S+VLD GCDWQ AR QLLALPGVGP Sbjct 361 FPSVQQLADVDPIHLAVPKARQRTLAALVAGLADRSIVLDTGCDWQSARTQLLALPGVGP 420 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WTAEVIAMRGLGDPDAFPA+DLGLR+AAK+L LP+ +R+LT SARWRPWRSYATQ+LWT Sbjct 421 WTAEVIAMRGLGDPDAFPAADLGLRVAAKRLRLPSSQRSLTAASARWRPWRSYATQYLWT 480 Query 481 TLEHPVNQWPPQE 493 TLEHPVN WPPQ+ Sbjct 481 TLEHPVNHWPPQQ 493 >gi|336460975|gb|EGO39856.1| adenosine deaminase [Mycobacterium avium subsp. paratuberculosis S397] Length=495 Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/493 (82%), Positives = 432/493 (88%), Gaps = 0/493 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +HDDFERCYRA+QSKDARFDGWFV AVLTTG+YCRPSCPVRPPFARNVRF PTAAAAQ Sbjct 1 MHDDFERCYRAVQSKDARFDGWFVTAVLTTGIYCRPSCPVRPPFARNVRFYPTAAAAQRA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWNVR DVVAR MRLIADGTVDRDGV GLAA+LGYT RQLERL Sbjct 61 GFRACKRCRPDASPGSPEWNVRGDVVARTMRLIADGTVDRDGVGGLAARLGYTTRQLERL 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 LQA VGAGPLALARAQR QTARVLIETT LPFGDVAFAAGFSSIRQFNDTVR + P+ Sbjct 121 LQAEVGAGPLALARAQRAQTARVLIETTELPFGDVAFAAGFSSIRQFNDTVRAVFESPPS 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 LR RA+AR SA S G V LRLPVR PF F GVFGHLAA+ VPGCEEVRDGAYRRTLR Sbjct 181 VLRRRASARCASAANSPGAVCLRLPVRTPFGFHGVFGHLAASVVPGCEEVRDGAYRRTLR 240 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 L +G GIV+LTPA DHVRC LVLDDFRDL A ARCRRLLDLDADPEA+ EAL ADP L Sbjct 241 LGFGTGIVTLTPAADHVRCELVLDDFRDLTAAIARCRRLLDLDADPEAVDEALAADPQLA 300 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 V KAPGQRIPRTVDEAE AVRAVL QQVS +AA THAGRLVAAYGR VHD G LTHT Sbjct 301 PAVRKAPGQRIPRTVDEAELAVRAVLGQQVSIRAARTHAGRLVAAYGRAVHDPEGTLTHT 360 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPS++QLA++DP HLAVPKARQRT+ ALVA LAD+S+VLD GCDWQ AR QLLALPGVGP Sbjct 361 FPSVQQLADVDPIHLAVPKARQRTLAALVAGLADRSIVLDTGCDWQSARTQLLALPGVGP 420 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WTAEVIAMRGLGDPDAFPA+DLGLR+AAK+LGLP+ +R+LT SARWRPWRS+ATQ+LWT Sbjct 421 WTAEVIAMRGLGDPDAFPAADLGLRVAAKRLGLPSGQRSLTAASARWRPWRSHATQYLWT 480 Query 481 TLEHPVNQWPPQE 493 TLEHPVN WPPQ+ Sbjct 481 TLEHPVNHWPPQQ 493 >gi|41408541|ref|NP_961377.1| hypothetical protein MAP2443 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396899|gb|AAS04760.1| AlkA [Mycobacterium avium subsp. paratuberculosis K-10] Length=507 Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/493 (82%), Positives = 431/493 (88%), Gaps = 0/493 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +HDDFERCYRA+QSKDARFDGWFV AVLTTG+YCRPSCPVRPPFARNVRF PTAAAAQ Sbjct 1 MHDDFERCYRAVQSKDARFDGWFVTAVLTTGIYCRPSCPVRPPFARNVRFYPTAAAAQRA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWNVR DVVAR MRLIADGTVDRDGV GLAA+LGYT RQLERL Sbjct 61 GFRACKRCRPDASPGSPEWNVRGDVVARTMRLIADGTVDRDGVGGLAARLGYTTRQLERL 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 LQA VGAGPLALARAQR QTARVLIETT LPFGDVAFAAGFSSIRQFNDTVR + P+ Sbjct 121 LQAEVGAGPLALARAQRAQTARVLIETTELPFGDVAFAAGFSSIRQFNDTVRAVFESPPS 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 LR RA+AR SA S G V LRLPVR PF F GVFGHLAA+ VPGCEEVRDGAYRRTLR Sbjct 181 VLRRRASARCASAANSPGAVCLRLPVRTPFGFHGVFGHLAASVVPGCEEVRDGAYRRTLR 240 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 L +G GIV+LTPA DHVRC LVLDDFRDL A ARCRRLLDLDADPEA+ EAL ADP L Sbjct 241 LGFGTGIVTLTPAADHVRCELVLDDFRDLTAAIARCRRLLDLDADPEAVDEALAADPQLA 300 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 V KAPGQ IPRTVDEAE AVRAVL QQVS +AA THAGRLVAAYGR VHD G LTHT Sbjct 301 PAVRKAPGQCIPRTVDEAELAVRAVLGQQVSIRAARTHAGRLVAAYGRAVHDPEGTLTHT 360 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPS++QLA++DP HLAVPKARQRT+ ALVA LAD+S+VLD GCDWQ AR QLLALPGVGP Sbjct 361 FPSVQQLADVDPIHLAVPKARQRTLAALVAGLADRSIVLDTGCDWQSARTQLLALPGVGP 420 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WTAEVIAMRGLGDPDAFPA+DLGLR+AAK+LGLP+ +R+LT SARWRPWRSYATQ+LWT Sbjct 421 WTAEVIAMRGLGDPDAFPAADLGLRVAAKRLGLPSGQRSLTAASARWRPWRSYATQYLWT 480 Query 481 TLEHPVNQWPPQE 493 TLEHPVN WPPQ+ Sbjct 481 TLEHPVNHWPPQQ 493 >gi|120405276|ref|YP_955105.1| alcohol dehydrogenase [Mycobacterium vanbaalenii PYR-1] gi|119958094|gb|ABM15099.1| DNA-3-methyladenine glycosylase II / DNA-O6-methylguanine--protein-cysteine S-methyltransferase [Mycobacterium vanbaalenii PYR-1] Length=495 Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/495 (76%), Positives = 417/495 (85%), Gaps = 1/495 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +H DF+RCYRA+QSKDARFDGWFV AVLTT +YCRPSCPVRPP+ARN+RF PTAAAAQ Sbjct 1 MHTDFDRCYRAVQSKDARFDGWFVTAVLTTRIYCRPSCPVRPPYARNMRFYPTAAAAQRA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWNVR DVVARAMRLI DGTVDR+GV+GLAA++GYT+RQLERL Sbjct 61 GFRACKRCRPDASPGSPEWNVRGDVVARAMRLITDGTVDREGVTGLAARVGYTVRQLERL 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 +QA VGA PLALARAQR Q AR LIETT +PF DVAFAAGFSSIRQFN+T+R C TP+ Sbjct 121 MQAEVGATPLALARAQRTQMARTLIETTEMPFSDVAFAAGFSSIRQFNETIRTVCALTPS 180 Query 181 ALRARAAARF-ESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTL 239 LR RA ARF TA AG +SLRLPVRAPFAFEG+FGHLAA+AVPG EEVRDGAYRRTL Sbjct 181 MLRTRARARFGRDHTAGAGVMSLRLPVRAPFAFEGLFGHLAASAVPGVEEVRDGAYRRTL 240 Query 240 RLPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDL 299 RLP GNGIVSLTP PDHVRC LV+DDFRDL A ARCRRLLDLDADPEA+V+AL AD L Sbjct 241 RLPRGNGIVSLTPHPDHVRCHLVVDDFRDLAAAIARCRRLLDLDADPEAVVDALSADDRL 300 Query 300 RAVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTH 359 A+V KAPGQRIPR VDE E A+R VL QQVS AA THAGR+ AAYG+ V D G LTH Sbjct 301 AALVAKAPGQRIPRCVDEHELALRVVLGQQVSMAAARTHAGRVAAAYGQSVDDPEGQLTH 360 Query 360 TFPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVG 419 FPS+ +L+EIDP HLA PKARQR++ ALV +LA+ ++VLD GCDW AR +LLALPG+G Sbjct 361 VFPSVAELSEIDPRHLAFPKARQRSLGALVTALAEGTVVLDPGCDWNAARERLLALPGIG 420 Query 420 PWTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLW 479 PW+AE+IAMRGLGDPDAFP +DLG+ AA++ GLP R L HS RWRPWRSYATQHLW Sbjct 421 PWSAEMIAMRGLGDPDAFPVTDLGVITAAEQTGLPTAPRLLADHSDRWRPWRSYATQHLW 480 Query 480 TTLEHPVNQWPPQEK 494 T L+H VNQWPP+EK Sbjct 481 TALDHSVNQWPPREK 495 >gi|118468735|ref|YP_889180.1| transcriptional regulator, Ada family protein/DNA-3-methyladenine glycosylase II [Mycobacterium smegmatis str. MC2 155] gi|118170022|gb|ABK70918.1| transcriptional regulator, Ada family protein/DNA-3-methyladenine glycosylase II [Mycobacterium smegmatis str. MC2 155] Length=512 Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/490 (76%), Positives = 419/490 (86%), Gaps = 0/490 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +H+DF+RCYRA+QSKDARFDGWFV AVLTTG+YCRPSCPVRPP ARN+RF PTAAAAQ Sbjct 18 MHEDFDRCYRAVQSKDARFDGWFVTAVLTTGIYCRPSCPVRPPLARNLRFYPTAAAAQAA 77 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWNVR DVVAR MRLIADGTVDR+GV+GLAA+LGYT RQL+R+ Sbjct 78 GFRACKRCRPDASPGSPEWNVRGDVVARCMRLIADGTVDREGVTGLAARLGYTTRQLQRI 137 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 QA +GA PLALARAQR QTARVLIETT LPF DVAFA+GF+SIRQFNDTVR CD TP+ Sbjct 138 TQAELGASPLALARAQRAQTARVLIETTELPFSDVAFASGFASIRQFNDTVRAVCDLTPS 197 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 LR +A +RF +A+ G ++LRLPVRAPFA+EG+FGHLAA+A PG EEVR YRRTLR Sbjct 198 ELRHKARSRFGPVSAAPGALTLRLPVRAPFAYEGLFGHLAASAAPGIEEVRGDTYRRTLR 257 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP G+GIV L P PDHVRC LVLDDFRDL A ARCRRLLDLDADPEA+VE LGAD DL+ Sbjct 258 LPHGHGIVGLRPYPDHVRCELVLDDFRDLAAAIARCRRLLDLDADPEAVVEFLGADADLK 317 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 AVV KAPGQRIPRTVDEAE A+R V+ QQVS KAA TH GRLVA YG + D G LTH Sbjct 318 AVVAKAPGQRIPRTVDEAELALRVVIGQQVSIKAARTHVGRLVARYGSRIDDEGGGLTHV 377 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPS++QLAE+ P LA+P +R+RT+ ++V +LAD +LV+D GCDW AR QLLALPGVGP Sbjct 378 FPSVDQLAEMSPDDLAMPASRKRTVLSMVRALADGTLVVDPGCDWGLAREQLLALPGVGP 437 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WTAEVIAMRGLGDPDAFPASDLG+RLAA++LGLPA RALT +S RWRPWR+YATQHLWT Sbjct 438 WTAEVIAMRGLGDPDAFPASDLGVRLAAEQLGLPADTRALTAYSCRWRPWRAYATQHLWT 497 Query 481 TLEHPVNQWP 490 TLEH VNQWP Sbjct 498 TLEHDVNQWP 507 >gi|108800834|ref|YP_641031.1| DNA-3-methyladenine glycosylase II / DNA-O6-methylguanine--protein-cysteine S-methyltransferase / transcriptional regulator Ada [Mycobacterium sp. MCS] gi|119869974|ref|YP_939926.1| DNA-O6-methylguanine--protein-cysteine S-methyltransferase / DNA-3-methyladenine glycosylase II / transcriptional regulator Ada [Mycobacterium sp. KMS] gi|108771253|gb|ABG09975.1| DNA-3-methyladenine glycosylase II [Mycobacterium sp. MCS] gi|119696063|gb|ABL93136.1| DNA-3-methyladenine glycosylase II [Mycobacterium sp. KMS] Length=517 Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/493 (75%), Positives = 412/493 (84%), Gaps = 0/493 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 ++DDF+RCYRA+QSKDARFDGWFV AVLTT +YCRPSCPVRPPFARNVRF PTAAAAQ Sbjct 22 MYDDFDRCYRAVQSKDARFDGWFVTAVLTTRIYCRPSCPVRPPFARNVRFYPTAAAAQAA 81 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWNVR DV ARAMRLIADGTVDRDGV+GLA +LGYT RQL+R+ Sbjct 82 GFRACKRCRPDASPGSPEWNVRGDVAARAMRLIADGTVDRDGVTGLAGRLGYTTRQLQRI 141 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 LQA VGA PLALARAQR QTARVLIETT+LPF DVAFAAGFSSIRQFNDTVR TPT Sbjct 142 LQAEVGANPLALARAQRAQTARVLIETTDLPFSDVAFAAGFSSIRQFNDTVRATSACTPT 201 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 A+R RA RF +ATA AG++SLRLPVR PFA+EGVFGHLAA+AVPG EE RDGA+RRTLR Sbjct 202 AMRERARRRFGAATAGAGSLSLRLPVRRPFAYEGVFGHLAASAVPGVEEFRDGAFRRTLR 261 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 L G+GIV LTP HV C+L L+D RDL +A ARCRRLLDLDADPEA+V+ LGADPDL Sbjct 262 LSRGHGIVGLTPRDGHVDCVLHLEDLRDLSSAIARCRRLLDLDADPEAVVDVLGADPDLT 321 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 A+V KAPGQRIPRTVDEAE AVR VL QQVS KAA THA RLV YGRP+ D HG LTH Sbjct 322 ALVTKAPGQRIPRTVDEAELAVRVVLGQQVSLKAARTHAARLVTHYGRPISDPHGGLTHV 381 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FP++E+LA+I HLAVP++RQ T+ +L+A+LA + LD GCDW AR QL LPG+G Sbjct 382 FPTVEELADIAAPHLAVPRSRQATVRSLIAALASGDVRLDPGCDWNEARAQLTVLPGIGT 441 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WTAEVIAMRGLGDPDAFP +DLG+ AA+ LGL RAL H ARWRPWR+YATQHLWT Sbjct 442 WTAEVIAMRGLGDPDAFPVTDLGVLTAARHLGLAEDARALAAHGARWRPWRAYATQHLWT 501 Query 481 TLEHPVNQWPPQE 493 L+HPVN WPP+E Sbjct 502 ALDHPVNDWPPKE 514 >gi|126436432|ref|YP_001072123.1| DNA-3-methyladenine glycosylase II / DNA-O6-methylguanine--protein-cysteine S-methyltransferase / transcriptional regulator Ada [Mycobacterium sp. JLS] gi|126236232|gb|ABN99632.1| DNA-O6-methylguanine--protein-cysteine S-methyltransferase [Mycobacterium sp. JLS] Length=496 Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/493 (75%), Positives = 410/493 (84%), Gaps = 0/493 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 ++DDF+RCYRA+QSKDARFDGWFV AVLTT +YCRPSCPVRPPFARNVRF PTAAAA Sbjct 1 MYDDFDRCYRAVQSKDARFDGWFVTAVLTTRIYCRPSCPVRPPFARNVRFYPTAAAALAA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWNVR DV ARAMRLIADGTVDRDGV+GLA +LGYT RQL+R+ Sbjct 61 GFRACKRCRPDASPGSPEWNVRGDVAARAMRLIADGTVDRDGVTGLAGRLGYTTRQLQRI 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 LQA VGA PLALARAQR QTARVLIETT+LPF DVAFAAGFSSIRQFNDTVR TPT Sbjct 121 LQAEVGANPLALARAQRAQTARVLIETTDLPFSDVAFAAGFSSIRQFNDTVRATSACTPT 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 A+R RA RF +ATA AG+++LRLPVR PFA+EGVFGHLAA+AVPG EE RDGA+RRTLR Sbjct 181 AMRERARRRFGAATAGAGSLALRLPVRRPFAYEGVFGHLAASAVPGVEEFRDGAFRRTLR 240 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 L G+GIV LTP HV C+L L+D RDL +A ARCRRLLDLDADPEA+V+ LGADPDL Sbjct 241 LSRGHGIVGLTPRDGHVDCVLHLEDLRDLSSAIARCRRLLDLDADPEAVVDVLGADPDLT 300 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 A+V KAPGQRIPRTVDEAE AVR VL QQVS KAA THA RLV YGRP+ D HG LT Sbjct 301 ALVTKAPGQRIPRTVDEAELAVRVVLGQQVSLKAARTHAARLVTHYGRPISDPHGGLTRV 360 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FP++E+LA+I HLAVP++RQ T+ +L+A+LA + LD GCDW AR QL LPG+G Sbjct 361 FPTVEELADIAAPHLAVPRSRQSTVRSLIAALASGDVRLDPGCDWNEARAQLTVLPGIGT 420 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WTAEVIAMRGLGDPDAFP +DLG+ AA+ LGL RAL H ARWRPWR+YATQHLWT Sbjct 421 WTAEVIAMRGLGDPDAFPVTDLGVLTAARHLGLAEDARALAAHGARWRPWRAYATQHLWT 480 Query 481 TLEHPVNQWPPQE 493 L+HPVN WPP+E Sbjct 481 ALDHPVNDWPPKE 493 >gi|333989960|ref|YP_004522574.1| Ada regulatory protein AlkA [Mycobacterium sp. JDM601] gi|333485928|gb|AEF35320.1| Ada regulatory protein AlkA [Mycobacterium sp. JDM601] Length=501 Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/498 (75%), Positives = 412/498 (83%), Gaps = 4/498 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +HDDF+RCYRA+QS DARFDGWF AVLTT +YCRPSCPVRPP RNVRF PTAAAAQ Sbjct 1 MHDDFDRCYRAVQSSDARFDGWFYTAVLTTRIYCRPSCPVRPPLPRNVRFYPTAAAAQRA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDA+PGSPEWNVR D+V RAMRL+ADGTVDR+GV+GLA LGY+ RQL+RL Sbjct 61 GFRACKRCRPDAAPGSPEWNVRGDIVGRAMRLVADGTVDREGVTGLAGHLGYSTRQLQRL 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 L VGAGPLALARAQR QTAR+LIETT+LP D+AFAAGF+SIRQFNDTVR TPT Sbjct 121 LHNEVGAGPLALARAQRAQTARILIETTDLPLSDIAFAAGFASIRQFNDTVRAVWATTPT 180 Query 181 ALRARAAARFESAT----ASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYR 236 ALR AAARF++ + S G +SLRLPVR PFAFEGVFGHLAA AVPGCEEVRDGAYR Sbjct 181 ALRQHAAARFKAESDRRPPSPGGLSLRLPVRTPFAFEGVFGHLAACAVPGCEEVRDGAYR 240 Query 237 RTLRLPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGAD 296 RTLRLP GNGIVSLTPAPDHVRC LVLDDFRDL A RCRRLLDLDADPEA+VEAL D Sbjct 241 RTLRLPHGNGIVSLTPAPDHVRCELVLDDFRDLTAAITRCRRLLDLDADPEAVVEALTDD 300 Query 297 PDLRAVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGA 356 P+L +V KAPGQRIPRTVDEAE AVRAVL+QQVS KAA TH RL+ +G P+ D G Sbjct 301 PELAPLVAKAPGQRIPRTVDEAELAVRAVLSQQVSVKAARTHTRRLLLGHGEPIVDPSGG 360 Query 357 LTHTFPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALP 416 LTH FPS+E+LA+ID LA+P+AR+RT+ ALVA LAD S+ L AGCDW RAR LL LP Sbjct 361 LTHVFPSVERLADIDADRLALPRARRRTLLALVAGLADGSISLGAGCDWGRARKSLLELP 420 Query 417 GVGPWTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQ 476 GVG WTAE+IAMRGLGDPDAFPA+DLG+R+A ++LGLP Q RALT S RWRPWRSYATQ Sbjct 421 GVGAWTAELIAMRGLGDPDAFPATDLGVRVAVRRLGLPEQPRALTERSLRWRPWRSYATQ 480 Query 477 HLWTTLEHPVNQWPPQEK 494 HLWT L+H VN WP K Sbjct 481 HLWTALDHAVNDWPRTSK 498 >gi|289757419|ref|ZP_06516797.1| ada regulatory protein alkA [Mycobacterium tuberculosis T85] gi|289712983|gb|EFD76995.1| ada regulatory protein alkA [Mycobacterium tuberculosis T85] Length=359 Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/359 (100%), Positives = 359/359 (100%), Gaps = 0/359 (0%) Query 138 MQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPTALRARAAARFESATASA 197 MQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPTALRARAAARFESATASA Sbjct 1 MQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPTALRARAAARFESATASA 60 Query 198 GTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLRLPWGNGIVSLTPAPDHV 257 GTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLRLPWGNGIVSLTPAPDHV Sbjct 61 GTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLRLPWGNGIVSLTPAPDHV 120 Query 258 RCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLRAVVGKAPGQRIPRTVDE 317 RCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLRAVVGKAPGQRIPRTVDE Sbjct 121 RCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLRAVVGKAPGQRIPRTVDE 180 Query 318 AEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHTFPSIEQLAEIDPGHLAV 377 AEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHTFPSIEQLAEIDPGHLAV Sbjct 181 AEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHTFPSIEQLAEIDPGHLAV 240 Query 378 PKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGPWTAEVIAMRGLGDPDAF 437 PKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGPWTAEVIAMRGLGDPDAF Sbjct 241 PKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGPWTAEVIAMRGLGDPDAF 300 Query 438 PASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWTTLEHPVNQWPPQEKIA 496 PASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWTTLEHPVNQWPPQEKIA Sbjct 301 PASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWTTLEHPVNQWPPQEKIA 359 >gi|145222914|ref|YP_001133592.1| alcohol dehydrogenase [Mycobacterium gilvum PYR-GCK] gi|315443377|ref|YP_004076256.1| DNA-O6-methylguanine--protein-cysteine S-methyltransferase ;transcriptional regulator Ada;DNA-3-methyladenine glycosylase II [Mycobacterium sp. Spyr1] gi|145215400|gb|ABP44804.1| DNA-O6-methylguanine--protein-cysteine S-methyltransferase / DNA-3-methyladenine glycosylase II [Mycobacterium gilvum PYR-GCK] gi|315261680|gb|ADT98421.1| DNA-O6-methylguanine--protein-cysteine S-methyltransferase ;Transcriptional regulator Ada;DNA-3-methyladenine glycosylase II [Mycobacterium sp. Spyr1] Length=503 Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/493 (74%), Positives = 396/493 (81%), Gaps = 1/493 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 ++ DF+RCYRA+QSKD RFDGWFV AVLTT +YCRPSCPVRPP+ARN+RF PTAAAAQ Sbjct 1 MYTDFDRCYRAVQSKDTRFDGWFVTAVLTTAIYCRPSCPVRPPYARNMRFYPTAAAAQRA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWNVR DVVARAMRLIADG VDRDGV GLAA+LGYT+RQLER+ Sbjct 61 GFRACKRCRPDASPGSPEWNVRGDVVARAMRLIADGVVDRDGVGGLAARLGYTVRQLERV 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 Q VGA PLALARAQR Q AR+LIETT + F D AFAAGFSSIRQFNDTVR D TPT Sbjct 121 TQTEVGATPLALARAQRAQMARILIETTEMRFADAAFAAGFSSIRQFNDTVRSVSDLTPT 180 Query 181 ALRARAAARFES-ATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTL 239 LR RA +R + A G +SLRL VR PFAFEG+FGHLAA+AVPG EEV DG YRRTL Sbjct 181 MLRRRARSRRGADAEGGTGELSLRLAVRTPFAFEGLFGHLAASAVPGVEEVSDGTYRRTL 240 Query 240 RLPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDL 299 RLP G GIVSLTP PDHV C LVLDDFRDL TA ARCRRLLDLDADPEAIV AL AD L Sbjct 241 RLPHGKGIVSLTPHPDHVGCRLVLDDFRDLSTAIARCRRLLDLDADPEAIVSALSADETL 300 Query 300 RAVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTH 359 A+V KAPGQRIPRTVDE E AVR VL QQVS AA THA RLV AYG+PV G LTH Sbjct 301 TALVAKAPGQRIPRTVDEHELAVRVVLGQQVSMAAARTHAARLVQAYGQPVERAGGTLTH 360 Query 360 TFPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVG 419 FPS+ L+EIDP +LA P+AR+RT+ ALV +LAD S+ LD GCD AR LL LPG+G Sbjct 361 VFPSVTDLSEIDPENLAFPRARRRTLIALVGALADGSVTLDTGCDRDAARAALLGLPGIG 420 Query 420 PWTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLW 479 PWT E+IAMRGLGDPDAFP DLG+ AA ++GLPA R L HS RWRPWRSYATQHLW Sbjct 421 PWTTEMIAMRGLGDPDAFPRGDLGVIAAATQIGLPATPRGLAQHSVRWRPWRSYATQHLW 480 Query 480 TTLEHPVNQWPPQ 492 T L+H VN+WPP+ Sbjct 481 TALDHSVNEWPPK 493 >gi|284033727|ref|YP_003383658.1| AraC family transcriptional regulator [Kribbella flavida DSM 17836] gi|283813020|gb|ADB34859.1| transcriptional regulator, AraC family [Kribbella flavida DSM 17836] Length=490 Score = 629 bits (1622), Expect = 3e-178, Method: Compositional matrix adjust. Identities = 321/492 (66%), Positives = 374/492 (77%), Gaps = 2/492 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +++ ERC RA+QSKDARFDGWF AVLTT +YCRPSCPV PP +N+RF P+AAAAQ Sbjct 1 MYECVERCVRAVQSKDARFDGWFFTAVLTTRIYCRPSCPVVPPKVKNMRFYPSAAAAQQA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWN R+D+VARAMRLIADG VDRDGV GLA QLGY++RQ++R Sbjct 61 GFRACKRCRPDASPGSPEWNDRADLVARAMRLIADGVVDRDGVPGLATQLGYSVRQVQRQ 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 LQA +GAGPLALARAQR QTARVLIET++L DVAFA+GFSS+R FN+TV+ +PT Sbjct 121 LQAELGAGPLALARAQRAQTARVLIETSDLQMADVAFASGFSSVRTFNETVQEVFALSPT 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 LR RA S + GT+SLRLP RAP + +FGHL AT VPG EE GAYRRTLR Sbjct 181 ELRGRA--HRGSHPTAPGTISLRLPFRAPLTPDNLFGHLIATGVPGVEEWHGGAYRRTLR 238 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP G+G+VSL P PDH+ C L L D RDL A +RCRR+LDLDADP A+ E L DP L Sbjct 239 LPHGHGVVSLRPTPDHIACQLSLTDQRDLAIAISRCRRMLDLDADPVAVDELLSEDPVLA 298 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 +V KAPG+R+PRTVD AEFAVRAVL QQVST AA THA RLV AYG PV D G LTH Sbjct 299 PLVAKAPGRRVPRTVDGAEFAVRAVLGQQVSTAAARTHASRLVQAYGEPVDDPAGGLTHL 358 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FP ++ LA +DP LA P++R+ T+ LVA+LA + L AG DW RAR QL ALPGVGP Sbjct 359 FPRMDALAGLDPETLAFPQSRRTTLTTLVAALAAGEIDLGAGSDWDRAREQLAALPGVGP 418 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WT E IAMR LGDPDAF ASDLG+R AA+ LGLP +AL H+ WRPWR+YA Q+LW Sbjct 419 WTVESIAMRALGDPDAFVASDLGIRYAARDLGLPTAPKALIAHARAWRPWRAYAVQYLWA 478 Query 481 TLEHPVNQWPPQ 492 T EHP+N+ P + Sbjct 479 TGEHPINRIPAE 490 >gi|291455156|ref|ZP_06594546.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291358105|gb|EFE85007.1| conserved hypothetical protein [Streptomyces albus J1074] Length=492 Score = 619 bits (1597), Expect = 3e-175, Method: Compositional matrix adjust. Identities = 329/491 (68%), Positives = 375/491 (77%), Gaps = 1/491 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 ++ D ERC RA+QSKDARFDGWF AVLTTG+YCRPSCP PP N+ F P+AAA Q Sbjct 1 MYTDTERCVRAVQSKDARFDGWFFTAVLTTGIYCRPSCPAVPPKPANMVFHPSAAACQQA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPD SPGSPEWN R+D VARAMRLIADGTVDR+GV GLAA+LGY+ RQ+ER Sbjct 61 GFRACKRCRPDTSPGSPEWNQRADAVARAMRLIADGTVDREGVPGLAARLGYSTRQIERQ 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 L A +GAGPLALARAQR QTAR+LIETT LP D+AFAAGFSS+R FNDTVR +PT Sbjct 121 LLAELGAGPLALARAQRAQTARLLIETTTLPMADIAFAAGFSSVRTFNDTVREVYALSPT 180 Query 181 ALRARAAARFESATASA-GTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTL 239 LRAR+ AR +A A G VSLRLP+R PF + VFGHLAATAVPG EE RDGAYRRTL Sbjct 181 ELRARSRARPGTAGDPAPGAVSLRLPLRTPFTPDNVFGHLAATAVPGVEEWRDGAYRRTL 240 Query 240 RLPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDL 299 LP G GI +LTPAPDH+ C L L D RDL A +RCRRLLDLDADP A+ E L ADP L Sbjct 241 DLPHGPGIATLTPAPDHIGCRLALTDLRDLTLAISRCRRLLDLDADPVAVDERLAADPVL 300 Query 300 RAVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTH 359 +V KAPG+R+PRTVD AEFAVRAVL QQVST AA THA RL AYG PV D G LTH Sbjct 301 APLVTKAPGRRVPRTVDAAEFAVRAVLGQQVSTAAARTHAARLATAYGTPVEDPAGGLTH 360 Query 360 TFPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVG 419 FP QLA +DP LA+P++R+ T+ LVA+LAD S+ L DW AR +LLALPG G Sbjct 361 LFPRPGQLAGLDPEQLAMPRSRRTTLTTLVAALADGSIGLGPEEDWDEARARLLALPGFG 420 Query 420 PWTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLW 479 PWT E+IAMR LGDPDAFPA+DLG+R AA++LGLP LT +A WRPWR+YA Q+LW Sbjct 421 PWTVEIIAMRALGDPDAFPATDLGVRRAAERLGLPGAPGGLTARAADWRPWRAYAVQYLW 480 Query 480 TTLEHPVNQWP 490 T +HP+N P Sbjct 481 ATDDHPINLLP 491 >gi|345010136|ref|YP_004812490.1| DNA repair protein and AraC family transcriptional regulator [Streptomyces violaceusniger Tu 4113] gi|344036485|gb|AEM82210.1| DNA repair protein and transcriptional regulator, AraC family [Streptomyces violaceusniger Tu 4113] Length=491 Score = 613 bits (1582), Expect = 1e-173, Method: Compositional matrix adjust. Identities = 318/491 (65%), Positives = 373/491 (76%), Gaps = 3/491 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +H D +RC RA Q+KDARFDGWF VAV+TTG+YCRPSCPV P A N+RF P+AAAAQ Sbjct 1 MHTDTDRCLRAAQAKDARFDGWFFVAVVTTGIYCRPSCPVVGPKAENMRFHPSAAAAQQA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSP+WN R+D+VARAMRLIADG VDRDGV GLAA+LGY+ RQ+ER Sbjct 61 GFRACKRCRPDASPGSPQWNERADLVARAMRLIADGVVDRDGVPGLAARLGYSTRQVERQ 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 L A +GAGPLALARAQR QTAR+LIET+ LP D+AFAAGF+S+R FN+TVR +PT Sbjct 121 LLAELGAGPLALARAQRAQTARLLIETSALPMADIAFAAGFASVRAFNETVREVFALSPT 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 LR RA T+ G ++LRLP RAP + +FGHLAATAVPG EE RDGAYRRTLR Sbjct 181 ELRQRATR--GPRTSVPGALTLRLPFRAPLCPDNLFGHLAATAVPGVEEWRDGAYRRTLR 238 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP+G G+V+L+P PDH+ C L L D RDL A +RCRRLLDLDADP A+ + L D L Sbjct 239 LPYGPGVVTLSPRPDHIACQLSLADLRDLAGAISRCRRLLDLDADPTAVDDLLRTDLQLA 298 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 +V KAPG+R+PR VD EFAVRAVL QQVST AA THAGRLVAA+G PV D G LTH Sbjct 299 PLVDKAPGRRVPRAVDADEFAVRAVLGQQVSTAAARTHAGRLVAAHGEPVEDPGGGLTHL 358 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPS++ LA +DP LA+P+ R+ T+ LV +LA+ + L G DW AR L LPG+GP Sbjct 359 FPSVQALAGLDPETLAMPRTRRATLTGLVGALAEGRVALGVGSDWDDARAALGTLPGLGP 418 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WT EVIAMR LGDPDAF +DLG+R AA +LGLPA ALT HSARWRPWR+YA QHLW Sbjct 419 WTVEVIAMRALGDPDAFVPTDLGVRRAAAELGLPATPGALTRHSARWRPWRAYAVQHLWA 478 Query 481 T-LEHPVNQWP 490 T H +N+ P Sbjct 479 TDAAHAINRLP 489 >gi|297156258|gb|ADI05970.1| transcriptional regulator, AraC family protein [Streptomyces bingchenggensis BCW-1] Length=490 Score = 613 bits (1581), Expect = 2e-173, Method: Compositional matrix adjust. Identities = 312/490 (64%), Positives = 372/490 (76%), Gaps = 2/490 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +H D +RC RA Q+KDARFDGWF VAV+TT +YCRPSCPV P N+RF P+AAA+Q Sbjct 1 MHTDTDRCLRAAQAKDARFDGWFFVAVVTTRIYCRPSCPVVGPKPENMRFYPSAAASQQA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSP+WN R+D+VARAMRLIADG VDRDGV GLAA+LGY+ RQ+ER Sbjct 61 GFRACKRCRPDASPGSPQWNERADLVARAMRLIADGVVDRDGVPGLAARLGYSTRQVERQ 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 L+A +GAGPLALARAQR QTAR+LIETT LP ++AFAAGF+SIR FNDTVR +PT Sbjct 121 LRAELGAGPLALARAQRAQTARLLIETTGLPMAEIAFAAGFASIRAFNDTVREVFALSPT 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 LR RA + +A+ G ++LRLP RAP + +FGHLAATAVPG EE RDGAYRRTLR Sbjct 181 ELRQRA--KRGGRSAAPGALTLRLPFRAPLCPDNLFGHLAATAVPGVEEWRDGAYRRTLR 238 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP+G+G+V+L P PDH+ C L L D RDL A +RCRRLLDLDADP A+ E L DPDL Sbjct 239 LPYGHGVVTLRPEPDHIGCQLSLTDMRDLAGAISRCRRLLDLDADPVAVDELLRTDPDLA 298 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 +V KAPG+R+PR D EFAVRAVL QQVST AA THAGRLV A+G + D G LTH Sbjct 299 PLVDKAPGRRVPRAADADEFAVRAVLGQQVSTAAARTHAGRLVTAHGERIEDPAGGLTHL 358 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FP++ LA +DP LA+P+ R+ T+ L+ +LA L L G DW AR +L LPG+GP Sbjct 359 FPTVRALAGLDPEALAMPRTRRATLLGLIDALASDRLALGVGSDWDEARARLAELPGIGP 418 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WT EVIAMR LGDPDAF +DLG+R AA +LGLPA ALT ++ RWRPWR+YA Q+LW Sbjct 419 WTVEVIAMRALGDPDAFLPTDLGVRHAAAELGLPATPGALTRYATRWRPWRAYAVQYLWA 478 Query 481 TLEHPVNQWP 490 T +HP+N P Sbjct 479 TGDHPINYLP 488 >gi|333023391|ref|ZP_08451455.1| putative transcriptional regulator [Streptomyces sp. Tu6071] gi|332743243|gb|EGJ73684.1| putative transcriptional regulator [Streptomyces sp. Tu6071] Length=513 Score = 611 bits (1576), Expect = 7e-173, Method: Compositional matrix adjust. Identities = 318/490 (65%), Positives = 374/490 (77%), Gaps = 3/490 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +H D +RC RA++S+DARFDGWF AV +TG+YCRPSCP P N+ FLP+AAA Q Sbjct 25 LHADRDRCVRAVRSRDARFDGWFFTAVTSTGIYCRPSCPALTPRPENMVFLPSAAACQQA 84 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWN R+D+VARAMRL+ADG VDR+GV GLAA+LGY+ RQ+ER Sbjct 85 GFRACKRCRPDASPGSPEWNHRADLVARAMRLVADGVVDREGVPGLAARLGYSARQVERQ 144 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 L A +GAGPLALARAQR QTAR+L+ETT LP D+AFA+GFSSIR FN+TV+ P+ Sbjct 145 LNAELGAGPLALARAQRAQTARLLVETTTLPMADIAFASGFSSIRTFNETVQEVYALAPS 204 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 ALRARA +A AGTV LRLP+R PF + +FGHLAATAVPG EE RDGAYRRTL Sbjct 205 ALRARAGG---TAEPGAGTVRLRLPLRGPFTPDNLFGHLAATAVPGVEEWRDGAYRRTLD 261 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP G GIV+L+P P++V C L L + RDL A +RCRRLLDLDADPEA+ L ADPDL Sbjct 262 LPHGPGIVALSPLPEYVDCRLRLRELRDLPAAISRCRRLLDLDADPEAVDTVLAADPDLA 321 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 +V KAPG+R+PRT DEAEFAVRAVL QQVST AA THAGRL A+YG PV D G LTH Sbjct 322 PLVRKAPGRRVPRTTDEAEFAVRAVLGQQVSTAAARTHAGRLAASYGTPVDDPDGGLTHL 381 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FP LA +DP LA+P++R+RT+ LV +LA +L L A DW AR +L LPG+GP Sbjct 382 FPGPAALAALDPEQLAMPRSRRRTLTGLVDALAGGTLALGADSDWDLARARLAELPGIGP 441 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WT EVIAMR LGDPDAFP +DLG+R AA+ LGLPA ALT +A WRPWR+YATQ+LW Sbjct 442 WTVEVIAMRALGDPDAFPVTDLGVRQAAEALGLPATPAALTRRAAAWRPWRAYATQYLWA 501 Query 481 TLEHPVNQWP 490 T HP+N P Sbjct 502 TSTHPINVMP 511 >gi|302522811|ref|ZP_07275153.1| transcriptional regulator [Streptomyces sp. SPB78] gi|302431706|gb|EFL03522.1| transcriptional regulator [Streptomyces sp. SPB78] Length=513 Score = 610 bits (1574), Expect = 1e-172, Method: Compositional matrix adjust. Identities = 318/490 (65%), Positives = 374/490 (77%), Gaps = 3/490 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +H D +RC RA++S+DARFDGWF AV +TG+YCRPSCP P N+ FLP+AAA Q Sbjct 25 LHADRDRCVRAVRSRDARFDGWFFTAVTSTGIYCRPSCPALTPRPENMVFLPSAAACQQA 84 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWN R+D+VARAMRL+ADG VDR+GV GLAA+LGY+ RQ+ER Sbjct 85 GFRACKRCRPDASPGSPEWNHRADLVARAMRLVADGVVDREGVPGLAARLGYSARQVERQ 144 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 L A +GAGPLALARAQR QTAR+L+ETT LP D+AFA+GFSSIR FN+TV+ P+ Sbjct 145 LNAELGAGPLALARAQRAQTARLLVETTTLPMADIAFASGFSSIRTFNETVQEVYALAPS 204 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 ALRARA +A AGTV LRLP+R PF + +FGHLAATAVPG EE RDGAYRRTL Sbjct 205 ALRARAGG---TAEPGAGTVRLRLPLRGPFTPDNLFGHLAATAVPGVEEWRDGAYRRTLD 261 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP G GIV+L+P P++V C L L + RDL A +RCRRLLDLDADPEA+ L ADPDL Sbjct 262 LPHGPGIVALSPLPEYVDCRLRLRELRDLPAAISRCRRLLDLDADPEAVDTVLTADPDLA 321 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 +V KAPG+R+PRT DEAEFAVRAVL QQVST AA THAGRL A+YG PV D G LTH Sbjct 322 PLVRKAPGRRVPRTTDEAEFAVRAVLGQQVSTAAARTHAGRLAASYGTPVDDPDGGLTHL 381 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FP LA +DP LA+P++R+RT+ LV +LA +L L A DW AR +L LPG+GP Sbjct 382 FPRPAALAALDPEQLAMPRSRRRTLTGLVDALAGGTLALGADSDWDLARARLAELPGIGP 441 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WT EVIAMR LGDPDAFP +DLG+R AA+ LGLPA ALT +A WRPWR+YATQ+LW Sbjct 442 WTVEVIAMRALGDPDAFPVTDLGVRQAAEALGLPATPAALTRRAAAWRPWRAYATQYLWA 501 Query 481 TLEHPVNQWP 490 T HP+N P Sbjct 502 TSTHPINVMP 511 >gi|318059732|ref|ZP_07978455.1| ADA-like regulatory protein [Streptomyces sp. SA3_actG] gi|318077676|ref|ZP_07985008.1| ADA-like regulatory protein [Streptomyces sp. SA3_actF] Length=501 Score = 608 bits (1568), Expect = 6e-172, Method: Compositional matrix adjust. Identities = 317/490 (65%), Positives = 373/490 (77%), Gaps = 3/490 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +H D +RC RA++S+DARFDGWF AV +TG+YCRPSCP P N+ FLP+AAA Q Sbjct 13 LHADRDRCVRAVRSRDARFDGWFFTAVTSTGIYCRPSCPALTPRPENMVFLPSAAACQQA 72 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDAS GSPEWN R+D+VARAMRL+ADG VDR+GV GLAA+LGY+ RQ+ER Sbjct 73 GFRACKRCRPDASSGSPEWNHRADLVARAMRLVADGVVDREGVPGLAARLGYSARQVERQ 132 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 L A +GAGPLALARAQR QTAR+L+ETT LP D+AFA+GFSSIR FN+TV+ P+ Sbjct 133 LNAELGAGPLALARAQRAQTARLLVETTTLPMADIAFASGFSSIRTFNETVQEVYALAPS 192 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 ALRARA +A AGTV LRLP+R PF + +FGHLAATAVPG EE RDGAYRRTL Sbjct 193 ALRARAGG---TAEPGAGTVRLRLPLRGPFTPDNLFGHLAATAVPGVEEWRDGAYRRTLD 249 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP G GIV+L+P P++V C L L + RDL A +RCRRLLDLDADPEA+ L ADPDL Sbjct 250 LPHGPGIVALSPLPEYVDCRLRLRELRDLPAAISRCRRLLDLDADPEAVDTVLAADPDLA 309 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 +V KAPG+R+PRT DEAEFAVRAVL QQVST AA THAGRL A+YG PV D G LTH Sbjct 310 PLVRKAPGRRVPRTTDEAEFAVRAVLGQQVSTAAARTHAGRLAASYGTPVEDPDGGLTHL 369 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FP LA +DP LA+P++R+RT+ LV +LA +L L A DW AR +L LPG+GP Sbjct 370 FPGPAALAALDPEQLAMPRSRRRTLTGLVDALAGGTLALGADSDWDLARARLAELPGIGP 429 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WT EVIAMR LGDPDAFP +DLG+R AA+ LGLPA ALT +A WRPWR+YATQ+LW Sbjct 430 WTVEVIAMRALGDPDAFPVTDLGVRQAAEALGLPATPAALTRRAAAWRPWRAYATQYLWA 489 Query 481 TLEHPVNQWP 490 T HP+N P Sbjct 490 TSTHPINVMP 499 >gi|302537835|ref|ZP_07290177.1| AlkA [Streptomyces sp. C] gi|302446730|gb|EFL18546.1| AlkA [Streptomyces sp. C] Length=499 Score = 606 bits (1563), Expect = 2e-171, Method: Compositional matrix adjust. Identities = 321/492 (66%), Positives = 369/492 (75%), Gaps = 2/492 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 ++ D +RC RA+QSKDARFDGWF AV TTG+YCRPSCP PP N+ FLP+AAA Q Sbjct 1 MYTDTDRCVRAVQSKDARFDGWFFTAVRTTGIYCRPSCPAVPPKVENMSFLPSAAACQQA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 G+RACKRCRPDASPGSPEWN R+D VARAMRLI DG VDR+GV GLA +LGY+ RQ+ER Sbjct 61 GYRACKRCRPDASPGSPEWNARADAVARAMRLIQDGVVDREGVPGLALRLGYSTRQVERQ 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 L A +GAGPLALARAQR QTAR+LIET+ LP GDVAFAAGFSSIR FN+TVR TP Sbjct 121 LGAELGAGPLALARAQRAQTARLLIETSELPMGDVAFAAGFSSIRNFNETVREVFALTPG 180 Query 181 ALRARAAARFESATASA--GTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRT 238 LR RA GT+SLRLP RAP + +FGHLAATAVPG EE RDGAYRRT Sbjct 181 ELRLRAGRGTGGRGEPRIPGTISLRLPYRAPLNPDNLFGHLAATAVPGVEEWRDGAYRRT 240 Query 239 LRLPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPD 298 LRLP+G+G+V+LTP P+H+ C L L D RDL A +RCR +LDLDADPEA+ L DP Sbjct 241 LRLPYGSGVVALTPGPEHIGCRLALTDLRDLTIAISRCRWMLDLDADPEAVDGQLRTDPL 300 Query 299 LRAVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALT 358 L +V KAPG+R+PRTVD AEFAVRAVL QQVST AA THA RLVAAYG PV D HG LT Sbjct 301 LAPLVDKAPGRRVPRTVDAAEFAVRAVLGQQVSTAAARTHAARLVAAYGEPVEDPHGGLT 360 Query 359 HTFPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGV 418 H FPS LA IDP L++P++R+ T+ LVA+LAD SL L DW+ AR +L ALPG Sbjct 361 HLFPSPAALAGIDPESLSMPRSRRTTLTTLVAALADGSLPLGIDSDWEAARARLSALPGF 420 Query 419 GPWTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHL 478 GPWT EVIAMR LGDPDAF SDLG+R AA+ LGLP+ ALT +A WRPWR+YA Q+L Sbjct 421 GPWTTEVIAMRALGDPDAFLPSDLGVRKAARALGLPSTPAALTARAAGWRPWRAYAVQYL 480 Query 479 WTTLEHPVNQWP 490 W T HP+N P Sbjct 481 WATDGHPINHLP 492 >gi|21224767|ref|NP_630546.1| ADA-like regulatory protein [Streptomyces coelicolor A3(2)] gi|289767955|ref|ZP_06527333.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|4158207|emb|CAA22770.1| putative ADA-like regulatory protein [Streptomyces coelicolor A3(2)] gi|289698154|gb|EFD65583.1| conserved hypothetical protein [Streptomyces lividans TK24] Length=490 Score = 604 bits (1557), Expect = 1e-170, Method: Compositional matrix adjust. Identities = 326/490 (67%), Positives = 373/490 (77%), Gaps = 1/490 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +H D ERC RA+QSKDARFDGWF AVLTTG+YCRPSCPV PP N+ F P+AAA Q Sbjct 1 MHTDTERCVRAVQSKDARFDGWFFTAVLTTGIYCRPSCPVVPPKPGNMTFYPSAAACQQA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPD SPGSPEWN R+D+ ARAMRLIADG VDR+GV GLA++LGY+ RQ+ER Sbjct 61 GFRACKRCRPDTSPGSPEWNRRADLTARAMRLIADGVVDREGVPGLASRLGYSTRQVERQ 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 L A +GAGPLALARAQR QTAR+LIETT LP D+AFAAGFSSIR FNDTVR +P+ Sbjct 121 LLAELGAGPLALARAQRAQTARLLIETTPLPMADIAFAAGFSSIRTFNDTVREVYALSPS 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 LR RA +ATA G +SLRLP RAP + +FGHLAATAVPG EE RDGAYRRTLR Sbjct 181 ELRTRAPRNRRAATAP-GALSLRLPFRAPLNPDNLFGHLAATAVPGVEEWRDGAYRRTLR 239 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP+G+GIV+LTP PDH+ C L L D RDL A +RCRRLLDLDADP AI + L ADP L Sbjct 240 LPYGHGIVALTPNPDHIACRLTLSDLRDLTVAISRCRRLLDLDADPTAIDDQLRADPLLA 299 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 +V KAPG+R+PRTVDEAEFAVRAVL QQVST AA THA RLV A+G PV D G LTH Sbjct 300 PLVDKAPGRRVPRTVDEAEFAVRAVLGQQVSTAAARTHAARLVTAHGDPVDDPEGGLTHL 359 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPS E LA +DP LA+P+ R+ T LVA LAD S+ DW R +LLALPG GP Sbjct 360 FPSTEALAAVDPETLAMPRTRRTTFTTLVAHLADGSVNPGVESDWAETRARLLALPGFGP 419 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WTA+VIAMR LGDPDAF +DLG+R AA +LGLP+ ALT +A WRPWR+YA Q+LW Sbjct 420 WTADVIAMRALGDPDAFLPTDLGIRRAAAELGLPSTPAALTARAAAWRPWRAYAVQYLWA 479 Query 481 TLEHPVNQWP 490 T +HP+N P Sbjct 480 TDDHPINFLP 489 >gi|254382197|ref|ZP_04997558.1| conserved hypothetical protein [Streptomyces sp. Mg1] gi|194341103|gb|EDX22069.1| conserved hypothetical protein [Streptomyces sp. Mg1] Length=494 Score = 604 bits (1557), Expect = 1e-170, Method: Compositional matrix adjust. Identities = 320/493 (65%), Positives = 371/493 (76%), Gaps = 3/493 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 ++ D +RC RA++SKDARFDGWF AV TTG+YCRPSCP PP N+ FLP+AAA Q Sbjct 1 MYTDTDRCVRAVRSKDARFDGWFFTAVRTTGIYCRPSCPAVPPKVENMTFLPSAAACQQA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPD SPGSPEWN R+D VARAMRLI DG VDR+GV GLAA+LGY+ RQ+ER Sbjct 61 GFRACKRCRPDTSPGSPEWNARADAVARAMRLIQDGVVDREGVPGLAARLGYSTRQVERQ 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 L A +GAGPLALARAQR QTAR+LIET+ LP GD+AFAAGFSSIR FNDTVR P Sbjct 121 LGAELGAGPLALARAQRAQTARLLIETSALPMGDIAFAAGFSSIRTFNDTVREVFALAPG 180 Query 181 ALRARA-AARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTL 239 LR RA A GT++LRLP RAP + +FGHLAATAVPG EE R GAYRRTL Sbjct 181 ELRRRAEKAHRHQQPQVPGTIALRLPYRAPLNPDNLFGHLAATAVPGVEEWRAGAYRRTL 240 Query 240 RLPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDL 299 RLP+G G+V+LTP PDH+ C L L D RDL A +RCR +LDLDADPEA+ E L +DP L Sbjct 241 RLPYGTGVVALTPRPDHIGCQLALTDLRDLTIAISRCRWMLDLDADPEAVDEQLRSDPLL 300 Query 300 RAVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVH--DRHGAL 357 +V KAPG+R+PRTVD AEFAVRAVL QQVST AA THA RLV AYG PV D G L Sbjct 301 APLVDKAPGRRVPRTVDAAEFAVRAVLGQQVSTAAARTHAARLVTAYGEPVTDPDPEGGL 360 Query 358 THTFPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPG 417 TH FPS + LA +DP LA+P++R+ T+ LV++LAD SL L DW+ AR +L ALPG Sbjct 361 THLFPSPQALAALDPQSLALPRSRRTTLTTLVSALADGSLPLGIDSDWEDARARLNALPG 420 Query 418 VGPWTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQH 477 GPWT EVIAMR LGDPDAF ASDLG+R AAK+LGLP+ ALT +A WRPWR+YA Q+ Sbjct 421 FGPWTTEVIAMRALGDPDAFLASDLGVRKAAKELGLPSTPAALTARAAHWRPWRAYAVQY 480 Query 478 LWTTLEHPVNQWP 490 LW T HP+N+ P Sbjct 481 LWATDGHPINRLP 493 >gi|302529601|ref|ZP_07281943.1| transcriptional regulator [Streptomyces sp. AA4] gi|302438496|gb|EFL10312.1| transcriptional regulator [Streptomyces sp. AA4] Length=493 Score = 601 bits (1550), Expect = 8e-170, Method: Compositional matrix adjust. Identities = 317/494 (65%), Positives = 372/494 (76%), Gaps = 2/494 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 ++++ ERC RA+QSKD RFDGWF AVLTTG+YCRPSCPV PP N+RF P+AAAAQ Sbjct 1 MYEETERCIRAVQSKDDRFDGWFFTAVLTTGIYCRPSCPVVPPKVENMRFYPSAAAAQAA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSP WN R+DVVARAMRLI DG VDR+GV GLAA+LGY++RQ+ER Sbjct 61 GFRACKRCRPDASPGSPLWNERADVVARAMRLIGDGVVDREGVQGLAARLGYSVRQVERQ 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 +QA +GAGPLALARAQR +TAR+LIETT +P D+A AAGFSSIR FN+TVR TP+ Sbjct 121 VQAELGAGPLALARAQRAETARLLIETTAMPMSDIAHAAGFSSIRTFNETVRAVFALTPS 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 LR+R R T S G +SLRLP R P + +FGHL ATAVPG EE RDGAYRRTLR Sbjct 181 ELRSRV--RGGKRTKSPGVLSLRLPFRRPLCPDNLFGHLIATAVPGVEEWRDGAYRRTLR 238 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP G+G+VSL P PDHV C L L D RDL A +RCR LLDLDADP A+ E L ADP L Sbjct 239 LPHGHGVVSLRPEPDHVACRLSLTDLRDLAAAISRCRWLLDLDADPVAVDEQLAADPTLA 298 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 +V APG+R+PRT D AEFAVRAVL QQVST AA THA RL A+G P+ DR G LTH Sbjct 299 PLVAAAPGRRVPRTTDAAEFAVRAVLGQQVSTAAARTHAARLALAHGTPIEDREGGLTHL 358 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPS E LA +DP LA+PK+R+ T+ LV++L + L AG DW AR QL ALPG GP Sbjct 359 FPSPEALANLDPETLAMPKSRRATLLGLVSALVSGDVDLTAGGDWLHARAQLAALPGFGP 418 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WT E IAMR LGDPDAF A+DLG+++AA+ LGLP AL H+ RW+PWR+YA QHLW Sbjct 419 WTVESIAMRALGDPDAFVATDLGVKIAAETLGLPTSPAALIAHAKRWQPWRAYAVQHLWA 478 Query 481 TLEHPVNQWPPQEK 494 T +HP+N+ P +E Sbjct 479 TGDHPINRIPAEES 492 >gi|312199339|ref|YP_004019400.1| AraC family transcriptional regulator [Frankia sp. EuI1c] gi|311230675|gb|ADP83530.1| transcriptional regulator, AraC family [Frankia sp. EuI1c] Length=496 Score = 601 bits (1550), Expect = 9e-170, Method: Compositional matrix adjust. Identities = 321/490 (66%), Positives = 379/490 (78%), Gaps = 2/490 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 ++ D ERC RA+Q+KD RFDGWF AVLTTG+YCRPSCP PP N+RF P+AAAAQ Sbjct 1 MYQDVERCVRAVQAKDERFDGWFFTAVLTTGIYCRPSCPATPPKPANMRFYPSAAAAQQA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRP A PGSP+WN R+D+V RAMRLIADG VDR+GV GLAA+LGY++RQLER Sbjct 61 GFRACKRCRPGAVPGSPQWNERADLVGRAMRLIADGLVDREGVPGLAARLGYSVRQLERQ 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 L A +GAGPLAL RAQR QTAR+LIETT LP D+A+AAGF+S+R FNDTVR TP+ Sbjct 121 LFAELGAGPLALTRAQRAQTARLLIETTALPMADLAYAAGFASVRTFNDTVREVFALTPS 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 LRARA + + T GT+ LRLP R P + +FGHLAATAVPG EE RDGAYRRTLR Sbjct 181 ELRARARSTVDPRTQ--GTLVLRLPFRRPLCPDNLFGHLAATAVPGVEEWRDGAYRRTLR 238 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP G+GIV+L P PDHV C L L D RDL TA +RCR LLDLDADP A+ LGAD L Sbjct 239 LPRGHGIVALRPTPDHVECRLTLSDLRDLTTAISRCRWLLDLDADPVAVDAQLGADEALA 298 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 +V K+PG+R+PRT D EFA+RAVL QQVST AA THA RLVAA+G PV DR G LTH Sbjct 299 PLVAKSPGRRVPRTTDPPEFALRAVLGQQVSTAAARTHAARLVAAHGEPVEDREGGLTHL 358 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FP+ E LAE+DP LA+P++R+ T++ALVA+LA L LD G DW++AR +L ALPGVGP Sbjct 359 FPTPEALAELDPETLAMPRSRRATVSALVAALASGDLELDVGGDWEQARARLAALPGVGP 418 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WT E +AMR LGDPDAF A+DLG+R AA+ LGLPA+ ALT +A WRPWR+YA QHLW+ Sbjct 419 WTVESVAMRALGDPDAFVATDLGVRRAAEGLGLPARPAALTARAAAWRPWRAYAVQHLWS 478 Query 481 TLEHPVNQWP 490 T +HP+NQ P Sbjct 479 TSDHPINQIP 488 >gi|320007535|gb|ADW02385.1| DNA repair protein and transcriptional regulator, AraC family [Streptomyces flavogriseus ATCC 33331] Length=534 Score = 601 bits (1549), Expect = 1e-169, Method: Compositional matrix adjust. Identities = 318/490 (65%), Positives = 370/490 (76%), Gaps = 1/490 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +H+D ERC RA++SKDARFDGWF AVLTT +YCRPSCPV PP A N+ F P+AAA Q Sbjct 45 MHNDTERCVRAVRSKDARFDGWFFTAVLTTRIYCRPSCPVVPPKAANMTFYPSAAACQQA 104 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPD SPGSPEWN R+D VARAMRLI DG VDR+GV GLAA+LGY+ RQ+ER Sbjct 105 GFRACKRCRPDTSPGSPEWNARADSVARAMRLIQDGVVDREGVPGLAARLGYSARQVERQ 164 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 L A +GAGPLALAR+QR QTARVLIETT LP +VAFAAGFSSIR FNDTVR P Sbjct 165 LLAELGAGPLALARSQRAQTARVLIETTELPMAEVAFAAGFSSIRTFNDTVREVFALAPG 224 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 LR+RAA R ++G +SLRLP RAP +FGHLA+TAVPG EE RDGAYRRTL Sbjct 225 ELRSRAA-RGGRTPGTSGAISLRLPYRAPLTPGNLFGHLASTAVPGVEEWRDGAYRRTLT 283 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP G+GIV+LTP H+ C L L D RDL A +RCRRLLDLDADP A+ E L +DP L Sbjct 284 LPHGHGIVALTPQSGHIDCRLSLTDPRDLTQAISRCRRLLDLDADPVAVDEQLRSDPLLA 343 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 +V + PG+R+PRTVD AEFAVRAVL QQVST AA THA RLV A+G PV D G LTH Sbjct 344 PLVDEGPGRRVPRTVDPAEFAVRAVLGQQVSTAAARTHAARLVRAHGIPVEDPEGGLTHL 403 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FP+ E LA +DP LA+P++R+ T+ LVA+LAD SL L+ G DW R +L ALPG GP Sbjct 404 FPTSEALAGLDPEALALPRSRRTTLTTLVAALADGSLRLEEGADWTDVRTELAALPGFGP 463 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WT EV+AMR LGDPDAF +DLG+R AA++LGLPA ALT + RWRPWR+YA Q+LWT Sbjct 464 WTVEVVAMRALGDPDAFLPTDLGIRRAAEQLGLPATPAALTARADRWRPWRAYAVQYLWT 523 Query 481 TLEHPVNQWP 490 +HP+N P Sbjct 524 VDDHPINHLP 533 >gi|291300677|ref|YP_003511955.1| AraC family transcriptional regulator [Stackebrandtia nassauensis DSM 44728] gi|290569897|gb|ADD42862.1| transcriptional regulator, AraC family [Stackebrandtia nassauensis DSM 44728] Length=497 Score = 599 bits (1544), Expect = 4e-169, Method: Compositional matrix adjust. Identities = 320/496 (65%), Positives = 374/496 (76%), Gaps = 2/496 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +H+DFERC RA+QSKDARFDGWF AV +TG+YCRPSCPV PP N+RF P++AAAQ Sbjct 1 MHEDFERCVRAVQSKDARFDGWFFTAVTSTGIYCRPSCPVVPPKPENMRFYPSSAAAQAA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSPEWNVR+DVVARAMRLIADG VDR+GVSGLAA+LGY++RQLER Sbjct 61 GFRACKRCRPDASPGSPEWNVRADVVARAMRLIADGVVDREGVSGLAARLGYSVRQLERQ 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 ++ +GAGP A+ARAQR TAR+LIETT+L FG +AFAAGFSSIR FNDTV +PT Sbjct 121 VRGELGAGPGAVARAQRASTARLLIETTDLAFGQIAFAAGFSSIRAFNDTVVRVFALSPT 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 +LR RA +R + + +G +SLRLP R P + VFGHLAATAVPG EE RDGAYRRTLR Sbjct 181 SLRQRAKSR--AVSGGSGALSLRLPFRQPLCPDNVFGHLAATAVPGVEEWRDGAYRRTLR 238 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP G G+VSL P PDHV C+L L D RDL A ARCR LLDLDADP A+ E L D L Sbjct 239 LPHGPGVVSLRPGPDHVGCVLWLSDLRDLSIAIARCRWLLDLDADPVAVDELLSRDEVLA 298 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 +V KAPG+R+PRTVD EFAVRAVL QQVST AA THA RLVA YG+ V D G LTH Sbjct 299 PLVAKAPGRRVPRTVDPGEFAVRAVLGQQVSTAAARTHAARLVARYGQRVEDPGGGLTHL 358 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPS +LA +DP LA+P +R+ T+ LV +L D + L G DW+ A+ L ALPG GP Sbjct 359 FPSPGELAGLDPDGLAMPVSRKNTLLGLVRALVDGDVELGVGVDWRSAKEALSALPGFGP 418 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WT E IAMR LGDPDAF ASDLG+RLAA++LGLP RAL S W PWR+YA Q+LW Sbjct 419 WTVESIAMRALGDPDAFVASDLGIRLAAEQLGLPTGARALVERSRAWMPWRAYAVQYLWA 478 Query 481 TLEHPVNQWPPQEKIA 496 T EH +N P + ++ Sbjct 479 TGEHAINVLPSGDIVS 494 >gi|345003112|ref|YP_004805966.1| AraC family transcriptional regulator [Streptomyces sp. SirexAA-E] gi|344318738|gb|AEN13426.1| transcriptional regulator, AraC family [Streptomyces sp. SirexAA-E] Length=490 Score = 597 bits (1539), Expect = 1e-168, Method: Compositional matrix adjust. Identities = 321/490 (66%), Positives = 367/490 (75%), Gaps = 1/490 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +H D +RC RA++SKDARFDGWF AVLTT +YCRPSCPV PP RN+ F P+AAA Q Sbjct 1 MHTDTDRCVRAVRSKDARFDGWFFTAVLTTRIYCRPSCPVVPPKVRNMAFYPSAAACQQA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPD SPGSPEWNVR+D VARAMRLI DG VDR+GV GLAA+LGY+ RQ+ER Sbjct 61 GFRACKRCRPDTSPGSPEWNVRADSVARAMRLIQDGVVDREGVPGLAARLGYSARQIERQ 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 L A +GAGPLALARAQR QTARVLIETT LP +VA AAGFSSIR FNDTVR TP Sbjct 121 LLAELGAGPLALARAQRAQTARVLIETTALPMAEVALAAGFSSIRTFNDTVREVFALTPG 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 LR RAA R + G ++LRLP RAP +FGHLAATAVPG EE RDGAYRRTL Sbjct 181 ELRTRAA-RGAGTPHTPGVIALRLPYRAPLRPGNLFGHLAATAVPGVEEWRDGAYRRTLT 239 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP G+GIV+L+P P H+ C L L D RDL A +RCRRLLDLDADP A+ E L ADP L Sbjct 240 LPHGHGIVALSPQPGHIACRLSLTDPRDLTQAISRCRRLLDLDADPVAVDEELRADPLLA 299 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 +V APG+R+PRTVD AEFAVRAVL QQVST AA THA RLVAA+G PV D G LTH Sbjct 300 PLVEAAPGRRVPRTVDAAEFAVRAVLGQQVSTAAARTHAARLVAAHGVPVEDPEGGLTHL 359 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FP+ + LA +DP LA+P++R+ T+ LVA+LAD SL L G D AR L ALPG GP Sbjct 360 FPAPDALAGLDPEALALPRSRRATLTTLVAALADGSLRLGEGTDRDEARAGLSALPGFGP 419 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WT EVIAMR LGDPDAF +DLG+R AA+ LGLP+ ALT + RWRPWR+YA Q+LWT Sbjct 420 WTVEVIAMRALGDPDAFLPTDLGIRKAARHLGLPSTPAALTARATRWRPWRAYAVQYLWT 479 Query 481 TLEHPVNQWP 490 +HP+N P Sbjct 480 VDDHPINHLP 489 >gi|297203487|ref|ZP_06920884.1| transcriptional regulator [Streptomyces sviceus ATCC 29083] gi|197714461|gb|EDY58495.1| transcriptional regulator [Streptomyces sviceus ATCC 29083] Length=492 Score = 597 bits (1538), Expect = 2e-168, Method: Compositional matrix adjust. Identities = 323/491 (66%), Positives = 370/491 (76%), Gaps = 1/491 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 ++ + ERC RA+QSKDARFDGWF AVLTT +YCRPSCPV PP N+ F P+AAA Q Sbjct 1 MYTETERCVRAVQSKDARFDGWFFTAVLTTRIYCRPSCPVVPPKPENMTFYPSAAACQQA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPD SPGSPEWN R+D+VARAMRLIADG VDR+GV GLAA+LGY+ RQ+ER Sbjct 61 GFRACKRCRPDTSPGSPEWNQRADLVARAMRLIADGVVDREGVPGLAARLGYSTRQVERQ 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 L A +GAGPLALARAQR QTAR+LIETT LP D+AFAAGFS+IR FNDTVR P Sbjct 121 LLAELGAGPLALARAQRAQTARILIETTALPMADIAFAAGFSAIRTFNDTVREVYALAPG 180 Query 181 ALRARAAARFESATA-SAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTL 239 LR RAA R T + G++SLRLP RAP + +FGHLAATAVPG EE RDGAYRRTL Sbjct 181 ELRTRAAKRTAPDTPDTPGSLSLRLPFRAPLNPDNLFGHLAATAVPGVEEWRDGAYRRTL 240 Query 240 RLPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDL 299 RLP+G+G+V+LTP PDH+ C L L D RDL A +RCRRLLDLDADP AI + L DP L Sbjct 241 RLPYGHGVVALTPRPDHIACRLTLSDLRDLTVAISRCRRLLDLDADPVAIDDQLRTDPLL 300 Query 300 RAVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTH 359 +V KAPG+R+PRTVDEAEFAVRAVL QQVST AA THA RLV A+G PV D G LTH Sbjct 301 APLVDKAPGRRVPRTVDEAEFAVRAVLGQQVSTAAARTHAARLVTAHGEPVDDTEGGLTH 360 Query 360 TFPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVG 419 FP+ LA +DPG LA+P+ R+ T LV LAD SL L DW R LLALPG G Sbjct 361 LFPTPGALAALDPGTLAMPRTRRTTFTTLVNQLADGSLRLGVEHDWSETRALLLALPGFG 420 Query 420 PWTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLW 479 PWT +VIAMRGLGDPDAF +DLG+R AA++LGLPA ALT +A WRPWR+YA Q+LW Sbjct 421 PWTVDVIAMRGLGDPDAFLPTDLGIRRAAQELGLPATPAALTARAAAWRPWRAYAVQYLW 480 Query 480 TTLEHPVNQWP 490 T HP+N P Sbjct 481 ATDSHPINFLP 491 >gi|302557340|ref|ZP_07309682.1| transcriptional regulator, Ada family/DNA-3-methyladenine glycosylase II [Streptomyces griseoflavus Tu4000] gi|302474958|gb|EFL38051.1| transcriptional regulator, Ada family/DNA-3-methyladenine glycosylase II [Streptomyces griseoflavus Tu4000] Length=495 Score = 592 bits (1526), Expect = 6e-167, Method: Compositional matrix adjust. Identities = 320/492 (66%), Positives = 374/492 (77%), Gaps = 2/492 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +H D ERC RA++SKDARFDGWF AVLTTG+YCRPSCPV PP N+ F P+AAA Q Sbjct 1 MHTDTERCVRAVRSKDARFDGWFFTAVLTTGIYCRPSCPVVPPKPANMVFHPSAAACQQA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPD SPGSPEWN R+D+VARAMRLIADG VDR+GV GLAA+LGY+ RQ+ER Sbjct 61 GFRACKRCRPDTSPGSPEWNHRADLVARAMRLIADGVVDREGVPGLAARLGYSTRQIERQ 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 L A +GAGPLALARAQR QTAR+LIETT LP ++AFAAGF+S+R FNDTVR +P+ Sbjct 121 LLAELGAGPLALARAQRAQTARLLIETTRLPMAEIAFAAGFASVRTFNDTVREVFALSPS 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 LR RA +++ A+ G +SLRLP RAP + +FGHLAATAVPG EE RDGAYRRTLR Sbjct 181 DLRTRAPR--DASHATPGALSLRLPFRAPLNPDNLFGHLAATAVPGVEEWRDGAYRRTLR 238 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP+G+GIV+LTP PDH+ C L L D RDL A +RCRRLLDLDADP A+ L ADP L Sbjct 239 LPYGHGIVALTPRPDHIACRLTLGDPRDLTVAISRCRRLLDLDADPVAVDGQLRADPVLA 298 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 +V KAPG+R+PRTVDEAEFAVRAVL QQVST AA THA RLV A+G P+ D G LTH Sbjct 299 PLVDKAPGRRVPRTVDEAEFAVRAVLGQQVSTAAARTHAARLVTAHGTPLDDPEGGLTHL 358 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPS E LA +DP LA+P+ R+ T LV LA L L A DW R +LLALPG GP Sbjct 359 FPSPEALAAVDPETLALPRTRRTTFTTLVTRLAGGELHLGADSDWPGTRVRLLALPGFGP 418 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WTA+V+AMR LGDPDAF +DLG+R AA++LGLP+ ALT +A WRPWR+YA Q+LW Sbjct 419 WTADVVAMRALGDPDAFLPTDLGIRRAARELGLPSTPAALTARAAGWRPWRAYAVQYLWA 478 Query 481 TLEHPVNQWPPQ 492 T HP+N P Q Sbjct 479 TDSHPINFLPAQ 490 >gi|329940361|ref|ZP_08289642.1| ADA-like regulatory protein [Streptomyces griseoaurantiacus M045] gi|329300422|gb|EGG44319.1| ADA-like regulatory protein [Streptomyces griseoaurantiacus M045] Length=488 Score = 591 bits (1523), Expect = 1e-166, Method: Compositional matrix adjust. Identities = 317/490 (65%), Positives = 367/490 (75%), Gaps = 3/490 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +H D ERC RA++SKDARFDGWF AVLTTG+YCRPSCP PP N+ F P+AAA Q Sbjct 1 MHTDTERCVRAVRSKDARFDGWFFTAVLTTGIYCRPSCPAVPPRPENMTFHPSAAACQQA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPD SPGSPEWN R+D VARAMRLIADG VDR+GV GLA +LGY+ RQ+ER Sbjct 61 GFRACKRCRPDTSPGSPEWNQRADAVARAMRLIADGVVDREGVPGLATRLGYSTRQIERQ 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 L A +GAGPLALARAQR QTAR+LIETT LP D+AFAAGFSSIR FNDTVR +P+ Sbjct 121 LLAELGAGPLALARAQRAQTARLLIETTTLPMADLAFAAGFSSIRTFNDTVREVFALSPS 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 LRAR R + G +SLRLP RAP + +FGHLAATAVPG EE RDGAYRRTLR Sbjct 181 ELRAR---RPRQTVTAPGALSLRLPFRAPLHPDNLFGHLAATAVPGVEEWRDGAYRRTLR 237 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP+G+G+V+LTP PDH+ C L L D RDL A +RCRR+LDLDADP A+ LG DP L Sbjct 238 LPYGHGVVALTPRPDHIACRLTLSDLRDLPVAISRCRRMLDLDADPVAVDGQLGTDPLLA 297 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 +V KAPG+R+PRTVDEAEFA+RAVL QQVST AA THA RLV A+G + D G LTH Sbjct 298 PLVAKAPGRRVPRTVDEAEFALRAVLGQQVSTAAARTHAARLVTAHGERIEDPEGGLTHL 357 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FP+ E LA +DP LA+P+ R+ T LV LA+ + L DW R QLLALPG+GP Sbjct 358 FPAPEALAALDPEALAMPRTRRTTFTTLVRELAEGRVQLGVESDWAETRVQLLALPGLGP 417 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WT +VIAMR LGDPDAFP +DLG+R AA+ LGLPA ALT +A WRPWR+YA Q+LW Sbjct 418 WTVDVIAMRALGDPDAFPVTDLGIRRAARDLGLPATPAALTARAAAWRPWRAYAVQYLWA 477 Query 481 TLEHPVNQWP 490 T +HPVN P Sbjct 478 TDDHPVNVLP 487 >gi|297190918|ref|ZP_06908316.1| ada regulatory protein alkA [Streptomyces pristinaespiralis ATCC 25486] gi|297150679|gb|EFH30725.1| ada regulatory protein alkA [Streptomyces pristinaespiralis ATCC 25486] Length=491 Score = 590 bits (1521), Expect = 2e-166, Method: Compositional matrix adjust. Identities = 321/490 (66%), Positives = 371/490 (76%), Gaps = 0/490 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +H D ERC RA++SKDARFDGWF AVLTT +YCRPSCPV PP A N+ F P+AAA Q Sbjct 1 MHTDTERCVRAVRSKDARFDGWFFTAVLTTRIYCRPSCPVVPPKAENMVFYPSAAACQQA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPD SPGSPEWN R+D VARA+RLI DG VDR+GV GLAA+LGY+ RQ+ER Sbjct 61 GFRACKRCRPDTSPGSPEWNARADAVARAVRLIQDGVVDREGVPGLAARLGYSTRQVERQ 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 L A +GAGPLALARAQR QTAR+LIETT LP +VAFAAGFSSIR FNDTVR P Sbjct 121 LLAELGAGPLALARAQRAQTARLLIETTPLPMAEVAFAAGFSSIRTFNDTVREVFALAPG 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 LRARAA + A+ G ++LRLP RAP +FGHLAAT VPG EE RDGAYRRTL Sbjct 181 ELRARAARGRSAPAATPGVIALRLPYRAPLEPGNLFGHLAATGVPGVEEWRDGAYRRTLS 240 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP+G+GIVSL P PDH+ C L L D RDL A +RCR +LDLDADP A+ + L DP L Sbjct 241 LPYGHGIVSLAPHPDHIACRLSLTDPRDLTIAISRCRWMLDLDADPVAVDDQLRDDPLLA 300 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 +VGKAPG+R+PRTVD AEFAVRAVL QQVST AA THAGRLV A+G PV D G LTH Sbjct 301 PLVGKAPGRRVPRTVDAAEFAVRAVLGQQVSTAAARTHAGRLVRAHGVPVEDPEGGLTHL 360 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FP+ + LA +DP LA+P++R+ T+ LVA+LAD +L LD G DW RAR QL ALPG GP Sbjct 361 FPAPDALASLDPEALALPRSRRTTLTTLVAALADGTLKLDPGSDWDRARAQLAALPGFGP 420 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WT EVIAMR LGDPDAF +DLG+R AA LGLP+ ALT +A WRPWR+YA Q+LW Sbjct 421 WTVEVIAMRALGDPDAFLPTDLGMRRAAAALGLPSTPAALTARAAAWRPWRAYAVQYLWA 480 Query 481 TLEHPVNQWP 490 + +HP+N P Sbjct 481 SDDHPINHLP 490 >gi|300786794|ref|YP_003767085.1| adenosine deaminase/DNA-3-methyladenine glycosylase/8-oxoguanine DNA glycosylase [Amycolatopsis mediterranei U32] gi|299796308|gb|ADJ46683.1| adenosine deaminase/DNA-3-methyladenine glycosylase/8-oxoguanine DNA glycosylase [Amycolatopsis mediterranei U32] Length=487 Score = 586 bits (1510), Expect = 4e-165, Method: Compositional matrix adjust. Identities = 314/492 (64%), Positives = 368/492 (75%), Gaps = 9/492 (1%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +H+DFERC RA+Q+KDARFDGWF AVLTT +YCRPSCPV PP RN+ F P+AAAAQ Sbjct 1 MHEDFERCVRAVQAKDARFDGWFYTAVLTTKIYCRPSCPVVPPKPRNMSFYPSAAAAQQA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPDASPGSP WN R+D+VARAMRLIADG VD +GV GLAA+LGY++RQ+ER Sbjct 61 GFRACKRCRPDASPGSPLWNERADLVARAMRLIADGVVDTEGVRGLAARLGYSVRQVERQ 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 + A +GAGPLALARAQR QTAR LIETT LP ++A AAGF SIR FNDTVR +PT Sbjct 121 VFAELGAGPLALARAQRAQTARTLIETTTLPMTELALAAGFGSIRTFNDTVREVFALSPT 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 LR+RA + A+AG + LRLP R P + +FGHL AT VPG EE RDGAYRRTLR Sbjct 181 ELRSRAKG---TPQAAAGALVLRLPYRKPLCPDNLFGHLVATGVPGVEEWRDGAYRRTLR 237 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP G+G+V+L P H+ C L L D RDL AT+RCRRLLDLDADP A+ + L DP L Sbjct 238 LPHGHGVVALRPEDGHIACRLTLADLRDLPAATSRCRRLLDLDADPVAVDDQLATDPLLA 297 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 +V APG+R+PRT D AEFAVRAVL QQVST AA THA RLV A+G PV D G LTH Sbjct 298 PLVAAAPGRRVPRTADGAEFAVRAVLGQQVSTAAARTHAARLVVAHGEPVDDPEGGLTHL 357 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FPS E LA +DP LA+P++R+RT+ LV++LAD L L AG DW+ AR L ALPG GP Sbjct 358 FPSPEALASLDPETLAMPRSRRRTLLGLVSALAD-GLDLSAGSDWEAARAALGALPGFGP 416 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGL--PAQRRALTVHSARWRPWRSYATQHL 478 WT E IAMR LGDPDAF +DLG++ AA+ LGL PA A+ SA WRPWR+YATQHL Sbjct 417 WTVESIAMRALGDPDAFLPTDLGIKYAAEMLGLGGPA---AVVARSAAWRPWRAYATQHL 473 Query 479 WTTLEHPVNQWP 490 W T +H +N+ P Sbjct 474 WATGDHAINRMP 485 >gi|326775510|ref|ZP_08234775.1| DNA repair protein and transcriptional regulator, AraC family [Streptomyces cf. griseus XylebKG-1] gi|326655843|gb|EGE40689.1| DNA repair protein and transcriptional regulator, AraC family [Streptomyces griseus XylebKG-1] Length=490 Score = 582 bits (1501), Expect = 4e-164, Method: Compositional matrix adjust. Identities = 318/490 (65%), Positives = 363/490 (75%), Gaps = 1/490 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +H D ERC RA+QSKDARFDGWF AVLTT +YCRPSCPV PP RN+ F P+AAA Q Sbjct 1 MHTDTERCVRAVQSKDARFDGWFFTAVLTTRIYCRPSCPVVPPKVRNMTFYPSAAACQQA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPD SPGSPEWN R+D VARAMRLI DG VDR+GVSGLAA+LGY+ RQ+ER Sbjct 61 GFRACKRCRPDTSPGSPEWNARADSVARAMRLIRDGVVDREGVSGLAARLGYSARQIERQ 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 L A +GAGPLALARAQR QTAR+LIETT LP VAFAAGFSSIR FN+TVR P Sbjct 121 LLAELGAGPLALARAQRAQTARLLIETTALPMAQVAFAAGFSSIRTFNETVREVFGLAPG 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 LR RAA R A G ++LRLP RAP +FGHLAATAVPG EE RDGAYRRTL Sbjct 181 ELRTRAA-RGPGPAAVPGVIALRLPYRAPLNPGNLFGHLAATAVPGVEEWRDGAYRRTLT 239 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP+G+G+V+L+PAPDH+ C L L D RDL A +RCR LLDLDADP A+ L DP L Sbjct 240 LPYGHGVVALSPAPDHIACRLALTDPRDLTRAISRCRWLLDLDADPVAVDAQLRTDPVLA 299 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 +V PG+R+PRTVD AEFAVRAVL QQVST AA THA RLV A+G PV D G LTH Sbjct 300 PLVDAGPGRRVPRTVDGAEFAVRAVLGQQVSTAAARTHAARLVTAHGVPVEDPEGGLTHL 359 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FP+ E LA +DP LA+P+ R+ T+ LVA+LA+ L LD DW+RAR +L ALPG GP Sbjct 360 FPTPEALAGLDPETLALPRTRRTTLTTLVAALAEDRLRLDTDTDWERARTELAALPGFGP 419 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WT E IAMR LGDPDAF DLG+R AA +LGLPA ALT + WRPWR+YA Q+LWT Sbjct 420 WTVESIAMRALGDPDAFLPGDLGIRRAAGRLGLPATPAALTARAVDWRPWRAYAVQYLWT 479 Query 481 TLEHPVNQWP 490 +HP+N P Sbjct 480 VDDHPINHLP 489 >gi|29828476|ref|NP_823110.1| ADA-like regulatory protein [Streptomyces avermitilis MA-4680] gi|29605579|dbj|BAC69645.1| putative ADA-like regulatory protein [Streptomyces avermitilis MA-4680] Length=488 Score = 581 bits (1498), Expect = 8e-164, Method: Compositional matrix adjust. Identities = 313/490 (64%), Positives = 367/490 (75%), Gaps = 3/490 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +H D ERC RA++SKDARFDGWF AVLTT +YCRPSCPV PP N+ F P+AAA Q Sbjct 1 MHIDSERCVRAVRSKDARFDGWFFTAVLTTRIYCRPSCPVVPPKPANMTFYPSAAACQQA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPD SPGSPEWN R+D+VARAMRLI DG VDR+GV GLA +LGY+ RQ+ER Sbjct 61 GFRACKRCRPDTSPGSPEWNQRADLVARAMRLIGDGVVDREGVPGLATRLGYSTRQIERQ 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 L A +GAGPLALARAQR QTAR+LIETT+LP ++AFAAGFSSIR FNDTVR +P+ Sbjct 121 LLAELGAGPLALARAQRAQTARLLIETTSLPMAEIAFAAGFSSIRTFNDTVREVFALSPS 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 LR R + S G ++LRLP RAP + +FGHLAATAVPG EE RDGAYRRTLR Sbjct 181 ELRGRLPKK---TVVSPGALTLRLPFRAPLNPDNLFGHLAATAVPGVEEWRDGAYRRTLR 237 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP+G+GIV+LTPA DH+ C L L D RDL A +RCRR+LDLDADP AI + L ADP L Sbjct 238 LPYGHGIVALTPAADHIGCRLSLSDLRDLPVAISRCRRMLDLDADPVAIDDQLRADPLLA 297 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 +V KAPG+R+PRTVDEAEFAVRAVL QQVST AA THA RLV A+G V D G LTH Sbjct 298 PLVDKAPGRRVPRTVDEAEFAVRAVLGQQVSTAAARTHAARLVTAHGEAVTDPEGGLTHL 357 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FP+ E LA + P LA+P+ R+ T LV LA+ L L DW+ R +LL+LPG GP Sbjct 358 FPAPEALAAVAPESLAMPRTRRTTFTTLVRQLAEGGLHLGVESDWEETRARLLSLPGFGP 417 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WTA+VIAMR LGDPDAF +DLG+R AA++LGLP+ ALT +A WRPWR+YA Q+LW Sbjct 418 WTADVIAMRALGDPDAFLPTDLGIRRAAEELGLPSTPAALTARAAAWRPWRAYAVQYLWA 477 Query 481 TLEHPVNQWP 490 T HP+N P Sbjct 478 TDSHPINFLP 487 >gi|328886332|emb|CCA59571.1| Methylated-DNA--protein-cysteinemethyltransferase [Streptomyces venezuelae ATCC 10712] Length=511 Score = 581 bits (1498), Expect = 9e-164, Method: Compositional matrix adjust. Identities = 313/492 (64%), Positives = 362/492 (74%), Gaps = 0/492 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +H D ERC RA+QSKDARFDG F AV TT +YCRPSCPV PP N+ F +AA+ Q Sbjct 18 MHTDTERCVRAVQSKDARFDGVFFTAVRTTRIYCRPSCPVVPPKPENMEFHASAASCQRA 77 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPD SPGSPEWNVR+D VARA+RLI DG VDR+GV GLA +LG++ RQ+ER Sbjct 78 GFRACKRCRPDTSPGSPEWNVRADAVARAVRLIQDGVVDREGVPGLARRLGWSTRQIERQ 137 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 L A +GAGPLALARAQR QTARVLIETT +P G++AFAAGFSSIR FNDTVR TP Sbjct 138 LLAELGAGPLALARAQRAQTARVLIETTPMPLGEIAFAAGFSSIRTFNDTVREVFALTPG 197 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 LRARAA T + G +SLRLP RAP +FGHLAATAVPG EE RDGAYRRTLR Sbjct 198 ELRARAARPAPDRTPTPGVISLRLPFRAPLEPSNLFGHLAATAVPGVEEWRDGAYRRTLR 257 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP+G+GIV+L P DH+ C L L D RDL A +RCRRLLDLDADP A+ E L ADP L Sbjct 258 LPYGHGIVALAPRADHIACRLSLTDPRDLTHAISRCRRLLDLDADPVAVDERLRADPLLA 317 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 VV +APG+R+P TVD AEFAVRAVL QQVST AA THA RLV A+G PV D G LTH Sbjct 318 PVVDEAPGRRVPGTVDPAEFAVRAVLGQQVSTAAARTHAARLVTAHGTPVDDPEGGLTHL 377 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FP + LA +DP LA+P++R+ T+ LV +LAD +L L D + R +LLALPG GP Sbjct 378 FPGPDALAALDPETLALPRSRRTTLLTLVRALADGTLSLGPAGDREETRARLLALPGFGP 437 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WT E+IAMR LGDPDAF DLG+R AA LGLP ALT +A WRPWR+YA Q+LW Sbjct 438 WTTEIIAMRALGDPDAFLPGDLGVRRAAAGLGLPGTPAALTARAAHWRPWRAYAVQYLWA 497 Query 481 TLEHPVNQWPPQ 492 T +HP+N P + Sbjct 498 TDDHPINLLPSE 509 >gi|182434994|ref|YP_001822713.1| putative ADA-like transcriptional regulator [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463510|dbj|BAG18030.1| putative ADA-like transcriptional regulator [Streptomyces griseus subsp. griseus NBRC 13350] Length=490 Score = 581 bits (1498), Expect = 9e-164, Method: Compositional matrix adjust. Identities = 317/490 (65%), Positives = 363/490 (75%), Gaps = 1/490 (0%) Query 1 VHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE 60 +H D ERC RA+QSKD+RFDGWF AVLTT +YCRPSCPV PP RN+ F P+AAA Q Sbjct 1 MHTDTERCVRAVQSKDSRFDGWFFTAVLTTRIYCRPSCPVVPPKVRNMTFYPSAAACQQA 60 Query 61 GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL 120 GFRACKRCRPD SPGSPEWN R+D VARAMRLI DG VDR+GVSGLAA+LGY+ RQ+ER Sbjct 61 GFRACKRCRPDTSPGSPEWNARADSVARAMRLIRDGVVDREGVSGLAARLGYSARQIERQ 120 Query 121 LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT 180 L A +GAGPLALARAQR QTAR+LIETT LP VAFAAGFSSIR FN+TVR P Sbjct 121 LLAELGAGPLALARAQRAQTARLLIETTALPMAQVAFAAGFSSIRTFNETVREVFGLAPG 180 Query 181 ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR 240 LR RAA R A G ++LRLP RAP +FGHLAATAVPG EE RDGAYRRTL Sbjct 181 ELRTRAA-RGPGPAAVPGVIALRLPYRAPLNPGNLFGHLAATAVPGVEEWRDGAYRRTLT 239 Query 241 LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR 300 LP+G+G+V+L+PAPDH+ C L L D RDL A +RCR LLDLDADP A+ L DP L Sbjct 240 LPYGHGVVALSPAPDHIACRLALTDPRDLTRAISRCRWLLDLDADPVAVDAQLRTDPVLA 299 Query 301 AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT 360 +V PG+R+PRTVD AEFAVRAVL QQVST AA THA RLV A+G PV D G LTH Sbjct 300 PLVDAGPGRRVPRTVDGAEFAVRAVLGQQVSTAAARTHAARLVTAHGVPVEDPEGGLTHL 359 Query 361 FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP 420 FP+ E LA +DP LA+P+ R+ T+ LVA+LA+ L LD DW+RAR +L ALPG GP Sbjct 360 FPTPEALAGLDPEALALPRTRRTTLTTLVAALAEDRLRLDTDTDWERARTELAALPGFGP 419 Query 421 WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT 480 WT E IAMR LGDPDAF DLG+R AA +LGLPA ALT + WRPWR+YA Q+LWT Sbjct 420 WTVESIAMRALGDPDAFLPGDLGIRRAAGRLGLPATPAALTARAVDWRPWRAYAVQYLWT 479 Query 481 TLEHPVNQWP 490 +HP+N P Sbjct 480 VDDHPINHLP 489 >gi|290956292|ref|YP_003487474.1| ADA-like regulatory protein [Streptomyces scabiei 87.22] gi|260645818|emb|CBG68909.1| putative ADA-like regulatory protein [Streptomyces scabiei 87.22] Length=486 Score = 578 bits (1490), Expect = 7e-163, Method: Compositional matrix adjust. Identities = 310/484 (65%), Positives = 359/484 (75%), Gaps = 3/484 (0%) Query 10 RAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGEGFRACKRCR 69 RA++SKDARFDGWF AVLTT +YCRPSCPV PP A N+ F P+AAA Q GFRACKRCR Sbjct 2 RAVRSKDARFDGWFFTAVLTTRIYCRPSCPVVPPKAENMTFYPSAAACQQAGFRACKRCR 61 Query 70 PDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERLLQAVVGAGP 129 PD SPGSPEW+ R+D+VARAMRL+ DG VDR+GV GLA +LGY+ RQ+ER L A +GAGP Sbjct 62 PDTSPGSPEWDQRADLVARAMRLVGDGVVDREGVPGLARRLGYSARQVERQLLAELGAGP 121 Query 130 LALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPTALRARA--- 186 LALARAQR QTAR+LIETT LP ++AFAAGF+SIR FNDTVR +P+ LR RA Sbjct 122 LALARAQRAQTARLLIETTALPMAEIAFAAGFASIRTFNDTVREVFALSPSELRERATRS 181 Query 187 AARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLRLPWGNG 246 A + + ++G +SLRLP RAP + +FGHLAATAVPG EE RDGAYRRTLRLP+G+G Sbjct 182 ARQRSDSPGTSGALSLRLPFRAPLNPDNLFGHLAATAVPGVEEWRDGAYRRTLRLPYGHG 241 Query 247 IVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLRAVVGKA 306 IV L P PDH+ C L L D RDL A +RCRR+LDLDADP A+ E L DP L +V KA Sbjct 242 IVGLAPRPDHIACRLTLGDLRDLPVAISRCRRMLDLDADPVAVDEQLRTDPVLAPLVDKA 301 Query 307 PGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHTFPSIEQ 366 PG+R+PRTVDEAEFAVRAVL QQVST AA THA RLV A+G PV D G LTH FPS E Sbjct 302 PGRRVPRTVDEAEFAVRAVLGQQVSTAAARTHAARLVLAHGEPVDDPEGGLTHLFPSPEA 361 Query 367 LAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGPWTAEVI 426 LA +DP LA+P R+ T LV L D L L DW R +LLALPG GPWT EVI Sbjct 362 LAAVDPEALAMPGTRRTTFTTLVRRLVDGELHLGLDSDWAETRARLLALPGFGPWTVEVI 421 Query 427 AMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWTTLEHPV 486 AMR LGDPDAF DLG+R AA++LGLP+ ALT +A WRPWR+YA Q+LW T HP+ Sbjct 422 AMRALGDPDAFLPGDLGIRRAARELGLPSTPAALTARAAAWRPWRAYAVQYLWATDSHPI 481 Query 487 NQWP 490 N P Sbjct 482 NYLP 485 Lambda K H 0.323 0.136 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1065436273792 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40