BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1322 Length=98 Score E Sequences producing significant alignments: (Bits) Value gi|15608462|ref|NP_215838.1| hypothetical protein Rv1322 [Mycoba... 197 4e-49 gi|41408536|ref|NP_961372.1| hypothetical protein MAP2438c [Myco... 134 4e-30 gi|254774362|ref|ZP_05215878.1| hypothetical protein MaviaA2_067... 133 9e-30 gi|108800830|ref|YP_641027.1| hypothetical protein Mmcs_3866 [My... 130 8e-29 gi|118472410|ref|YP_889177.1| hypothetical protein MSMEG_4922 [M... 129 1e-28 gi|118465724|ref|YP_880778.1| hypothetical protein MAV_1542 [Myc... 129 1e-28 gi|145222926|ref|YP_001133604.1| hypothetical protein Mflv_2338 ... 127 5e-28 gi|296170263|ref|ZP_06851854.1| probable ATP/GTP-binding protein... 121 4e-26 gi|120405261|ref|YP_955090.1| hypothetical protein Mvan_4307 [My... 118 3e-25 gi|169628552|ref|YP_001702201.1| hypothetical protein MAB_1461 [... 117 4e-25 gi|134102681|ref|YP_001108342.1| hypothetical protein SACE_6244 ... 99.0 2e-19 gi|226307384|ref|YP_002767344.1| hypothetical protein RER_38970 ... 98.2 4e-19 gi|226360584|ref|YP_002778362.1| hypothetical protein ROP_11700 ... 97.4 5e-19 gi|111018462|ref|YP_701434.1| hypothetical protein RHA1_ro01458 ... 97.4 6e-19 gi|256380102|ref|YP_003103762.1| hypothetical protein Amir_6109 ... 89.0 2e-16 gi|312139185|ref|YP_004006521.1| hypothetical protein REQ_17671 ... 85.5 2e-15 gi|256390440|ref|YP_003112004.1| hypothetical protein Caci_1238 ... 84.7 4e-15 gi|269128095|ref|YP_003301465.1| hypothetical protein Tcur_3898 ... 84.3 5e-15 gi|54023039|ref|YP_117281.1| hypothetical protein nfa10720 [Noca... 83.6 1e-14 gi|325673510|ref|ZP_08153201.1| ATP/GTP-binding protein [Rhodoco... 82.4 2e-14 gi|302529749|ref|ZP_07282091.1| predicted protein [Streptomyces ... 79.0 2e-13 gi|258654028|ref|YP_003203184.1| hypothetical protein Namu_3902 ... 79.0 2e-13 gi|271963228|ref|YP_003337424.1| hypothetical protein Sros_1690 ... 77.8 6e-13 gi|300789552|ref|YP_003769843.1| hypothetical protein AMED_7733 ... 77.4 6e-13 gi|312194836|ref|YP_004014897.1| hypothetical protein FraEuI1c_0... 76.3 1e-12 gi|302869553|ref|YP_003838190.1| hypothetical protein Micau_5106... 76.3 1e-12 gi|324999736|ref|ZP_08120848.1| hypothetical protein PseP1_13256... 75.5 3e-12 gi|238060756|ref|ZP_04605465.1| hypothetical protein MCAG_01722 ... 75.5 3e-12 gi|317507970|ref|ZP_07965663.1| hypothetical protein HMPREF9336_... 74.7 4e-12 gi|330469821|ref|YP_004407564.1| hypothetical protein VAB18032_2... 74.3 5e-12 gi|296393007|ref|YP_003657891.1| hypothetical protein Srot_0578 ... 74.3 5e-12 gi|111225265|ref|YP_716059.1| hypothetical protein FRAAL5915 [Fr... 74.3 6e-12 gi|291299123|ref|YP_003510401.1| hypothetical protein Snas_1605 ... 73.6 1e-11 gi|229819810|ref|YP_002881336.1| hypothetical protein Bcav_1315 ... 73.2 1e-11 gi|296268897|ref|YP_003651529.1| hypothetical protein Tbis_0912 ... 72.8 2e-11 gi|337768191|emb|CCB76904.1| conserved protein of unknown functi... 72.4 2e-11 gi|145596129|ref|YP_001160426.1| hypothetical protein Strop_3617... 72.0 2e-11 gi|288924014|ref|ZP_06418081.1| hypothetical protein FrEUN1fDRAF... 71.6 3e-11 gi|254382343|ref|ZP_04997703.1| ATP/GTP-binding protein [Strepto... 71.6 3e-11 gi|117927876|ref|YP_872427.1| hypothetical protein Acel_0668 [Ac... 71.6 3e-11 gi|296138989|ref|YP_003646232.1| hypothetical protein Tpau_1262 ... 71.6 4e-11 gi|159039527|ref|YP_001538780.1| hypothetical protein Sare_3999 ... 71.2 4e-11 gi|297192025|ref|ZP_06909423.1| ATP/GTP-binding protein [Strepto... 70.5 8e-11 gi|297559333|ref|YP_003678307.1| ATP/GTP-binding protein [Nocard... 70.5 8e-11 gi|239990773|ref|ZP_04711437.1| putative ATP/GTP-binding protein... 69.7 1e-10 gi|295836469|ref|ZP_06823402.1| ATP/GTP-binding protein [Strepto... 69.7 1e-10 gi|256825621|ref|YP_003149581.1| hypothetical protein Ksed_18120... 69.3 2e-10 gi|29829406|ref|NP_824040.1| ATP/GTP-binding protein [Streptomyc... 69.3 2e-10 gi|291447786|ref|ZP_06587176.1| ATP/GTP-binding protein [Strepto... 69.3 2e-10 gi|182435939|ref|YP_001823658.1| putative ATP/GTP-binding protei... 68.9 2e-10 >gi|15608462|ref|NP_215838.1| hypothetical protein Rv1322 [Mycobacterium tuberculosis H37Rv] gi|15840775|ref|NP_335812.1| hypothetical protein MT1363.1 [Mycobacterium tuberculosis CDC1551] gi|31792517|ref|NP_855010.1| hypothetical protein Mb1356 [Mycobacterium bovis AF2122/97] 52 more sequence titles Length=98 Score = 197 bits (502), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 98/98 (100%), Positives = 98/98 (100%), Gaps = 0/98 (0%) Query 1 MARRRKPLHRQRPEPPSWALRRVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTA 60 MARRRKPLHRQRPEPPSWALRRVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTA Sbjct 1 MARRRKPLHRQRPEPPSWALRRVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTA 60 Query 61 HVVVWPTDLPQAGVDDRRHWHTPCWANRATRGPTRKWT 98 HVVVWPTDLPQAGVDDRRHWHTPCWANRATRGPTRKWT Sbjct 61 HVVVWPTDLPQAGVDDRRHWHTPCWANRATRGPTRKWT 98 >gi|41408536|ref|NP_961372.1| hypothetical protein MAP2438c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396894|gb|AAS04755.1| hypothetical protein MAP_2438c [Mycobacterium avium subsp. paratuberculosis K-10] Length=98 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 63/80 (79%), Positives = 71/80 (89%), Gaps = 0/80 (0%) Query 19 ALRRVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRR 78 ALRRVE GPDGH+YEVRP+AAARAVKTYRCPGCDHEIRSG AH+VVWP + G +DRR Sbjct 19 ALRRVEVGPDGHDYEVRPIAAARAVKTYRCPGCDHEIRSGAAHLVVWPVEPTLGGAEDRR 78 Query 79 HWHTPCWANRATRGPTRKWT 98 HWHT CWA+RATRGPTR+W+ Sbjct 79 HWHTGCWAHRATRGPTRRWS 98 >gi|254774362|ref|ZP_05215878.1| hypothetical protein MaviaA2_06795 [Mycobacterium avium subsp. avium ATCC 25291] Length=98 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 62/80 (78%), Positives = 71/80 (89%), Gaps = 0/80 (0%) Query 19 ALRRVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRR 78 ALRR+E GPDGH+YEVRP+AAARAVKTYRCPGCDHEIRSG AH+VVWP + G +DRR Sbjct 19 ALRRLEVGPDGHDYEVRPIAAARAVKTYRCPGCDHEIRSGAAHLVVWPVEPTLGGAEDRR 78 Query 79 HWHTPCWANRATRGPTRKWT 98 HWHT CWA+RATRGPTR+W+ Sbjct 79 HWHTGCWAHRATRGPTRRWS 98 >gi|108800830|ref|YP_641027.1| hypothetical protein Mmcs_3866 [Mycobacterium sp. MCS] gi|119869970|ref|YP_939922.1| hypothetical protein Mkms_3940 [Mycobacterium sp. KMS] gi|126436428|ref|YP_001072119.1| hypothetical protein Mjls_3852 [Mycobacterium sp. JLS] gi|108771249|gb|ABG09971.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696059|gb|ABL93132.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126236228|gb|ABN99628.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=98 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 59/78 (76%), Positives = 68/78 (88%), Gaps = 0/78 (0%) Query 21 RRVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRRHW 80 RRVE GPDG+EYEVRPV +RA KTYRCPGCDHEIR GTAH+VVWP D ++ V+DRRHW Sbjct 21 RRVETGPDGYEYEVRPVVGSRATKTYRCPGCDHEIRPGTAHLVVWPADSGESAVEDRRHW 80 Query 81 HTPCWANRATRGPTRKWT 98 HTPCW +RATRGPTR+W+ Sbjct 81 HTPCWTHRATRGPTRRWS 98 >gi|118472410|ref|YP_889177.1| hypothetical protein MSMEG_4922 [Mycobacterium smegmatis str. MC2 155] gi|118173697|gb|ABK74593.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=99 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 71/100 (71%), Positives = 80/100 (80%), Gaps = 3/100 (3%) Query 1 MARRRKPLHRQRPEPPSWAL--RRVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSG 58 MARRR+ RQ P P +L RRVE GPDG++YEVR V A+RA KTYRCPGCDHEIRSG Sbjct 1 MARRRRDKWRQTPPPLPPSLTSRRVETGPDGYDYEVRQVTASRATKTYRCPGCDHEIRSG 60 Query 59 TAHVVVWPTDLPQAGVDDRRHWHTPCWANRATRGPTRKWT 98 TAHVVVWPT +GV+DRRHWHTPCWANR RGPTR+W+ Sbjct 61 TAHVVVWPTG-SASGVEDRRHWHTPCWANRDNRGPTRRWS 99 >gi|118465724|ref|YP_880778.1| hypothetical protein MAV_1542 [Mycobacterium avium 104] gi|118167011|gb|ABK67908.1| conserved hypothetical protein [Mycobacterium avium 104] Length=76 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 60/76 (79%), Positives = 68/76 (90%), Gaps = 0/76 (0%) Query 23 VEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRRHWHT 82 +EAGPDGH+YEVRP+AAARAVKTYRCPGCDHEIRSG AH+VVWP + G +DRRHWHT Sbjct 1 MEAGPDGHDYEVRPIAAARAVKTYRCPGCDHEIRSGAAHLVVWPVEPTLGGAEDRRHWHT 60 Query 83 PCWANRATRGPTRKWT 98 CWA+RATRGPTRKW+ Sbjct 61 GCWAHRATRGPTRKWS 76 >gi|145222926|ref|YP_001133604.1| hypothetical protein Mflv_2338 [Mycobacterium gilvum PYR-GCK] gi|315443389|ref|YP_004076268.1| hypothetical protein Mspyr1_17710 [Mycobacterium sp. Spyr1] gi|145215412|gb|ABP44816.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315261692|gb|ADT98433.1| hypothetical protein Mspyr1_17710 [Mycobacterium sp. Spyr1] Length=97 Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 66/98 (68%), Positives = 74/98 (76%), Gaps = 1/98 (1%) Query 1 MARRRKPLHRQRPEPPSWALRRVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTA 60 M RRR R P A RR+E GPDG++YEVRPVAAARAVKTYRCPGCDHEIR TA Sbjct 1 MGRRRAARKRSPAAAPLPAPRRIEVGPDGYDYEVRPVAAARAVKTYRCPGCDHEIRPNTA 60 Query 61 HVVVWPTDLPQAGVDDRRHWHTPCWANRATRGPTRKWT 98 H+VVWP + DDRRHWHTPCW +RATRGPTR+W+ Sbjct 61 HLVVWPAET-SGDSDDRRHWHTPCWTHRATRGPTRRWS 97 >gi|296170263|ref|ZP_06851854.1| probable ATP/GTP-binding protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894986|gb|EFG74705.1| probable ATP/GTP-binding protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=85 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 65/80 (82%), Positives = 70/80 (88%), Gaps = 0/80 (0%) Query 19 ALRRVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRR 78 LRRVE GPDGHEYEVR VAAARAVKTYRCPGCDHEIRSGTAH+VVWPTD G DDRR Sbjct 6 VLRRVEVGPDGHEYEVRAVAAARAVKTYRCPGCDHEIRSGTAHLVVWPTDSTLGGADDRR 65 Query 79 HWHTPCWANRATRGPTRKWT 98 HWH PCW++R TRGPTR+W+ Sbjct 66 HWHVPCWSHRGTRGPTRRWS 85 >gi|120405261|ref|YP_955090.1| hypothetical protein Mvan_4307 [Mycobacterium vanbaalenii PYR-1] gi|119958079|gb|ABM15084.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=97 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 56/80 (70%), Positives = 65/80 (82%), Gaps = 1/80 (1%) Query 19 ALRRVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRR 78 A RR+E G DG++YEVRPVAAARA K YRCPGCDHEIR T+H+VVWP D G+DDRR Sbjct 19 APRRIETGADGYDYEVRPVAAARATKIYRCPGCDHEIRPATSHLVVWPAD-SSGGIDDRR 77 Query 79 HWHTPCWANRATRGPTRKWT 98 HWHT CWA+R RGPTR+W+ Sbjct 78 HWHTSCWAHRERRGPTRRWS 97 >gi|169628552|ref|YP_001702201.1| hypothetical protein MAB_1461 [Mycobacterium abscessus ATCC 19977] gi|169240519|emb|CAM61547.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=101 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 59/98 (61%), Positives = 72/98 (74%), Gaps = 2/98 (2%) Query 2 ARRRKPLHRQRPEPPSWALRRVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTAH 61 +RR+P R+ P S +VE G DG +Y VR +AAARAVK YRCPGCDHEI G AH Sbjct 5 GKRRQP-RREVPAALSIGGDQVEQGVDGFDYHVRRIAAARAVKVYRCPGCDHEIAIGVAH 63 Query 62 VVVWPTD-LPQAGVDDRRHWHTPCWANRATRGPTRKWT 98 VVVWP + P++G++DRRHWHTPCW NRA R PTR+W+ Sbjct 64 VVVWPAEGNPESGMEDRRHWHTPCWGNRANRSPTRRWS 101 >gi|134102681|ref|YP_001108342.1| hypothetical protein SACE_6244 [Saccharopolyspora erythraea NRRL 2338] gi|291004633|ref|ZP_06562606.1| hypothetical protein SeryN2_08949 [Saccharopolyspora erythraea NRRL 2338] gi|133915304|emb|CAM05417.1| hypothetical protein SACE_6244 [Saccharopolyspora erythraea NRRL 2338] Length=83 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 50/77 (65%), Positives = 57/77 (75%), Gaps = 2/77 (2%) Query 22 RVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRRHWH 81 RVE GPDG ++ VR V AA+A K YRCPGCDHEIR+G HVV WP GVDDRRHWH Sbjct 9 RVEEGPDG-DWMVRTVPAAQATKDYRCPGCDHEIRAGIGHVVAWPA-ADHGGVDDRRHWH 66 Query 82 TPCWANRATRGPTRKWT 98 T CW R+ RGPTR+W+ Sbjct 67 TGCWNARSRRGPTRRWS 83 >gi|226307384|ref|YP_002767344.1| hypothetical protein RER_38970 [Rhodococcus erythropolis PR4] gi|226186501|dbj|BAH34605.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=114 Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 45/80 (57%), Positives = 55/80 (69%), Gaps = 2/80 (2%) Query 19 ALRRVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRR 78 AL R E GP G Y VRP+ + A K YRCPGCDH+IR G AHVV WP++ G ++RR Sbjct 37 ALVREEPGPGGEMYMVRPIPGSNATKFYRCPGCDHDIRPGVAHVVTWPSE--PGGANERR 94 Query 79 HWHTPCWANRATRGPTRKWT 98 HWHT CW+ R TR TR+W+ Sbjct 95 HWHTGCWSGRGTRSLTRRWS 114 >gi|226360584|ref|YP_002778362.1| hypothetical protein ROP_11700 [Rhodococcus opacus B4] gi|226239069|dbj|BAH49417.1| hypothetical protein [Rhodococcus opacus B4] Length=108 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 48/83 (58%), Positives = 58/83 (70%), Gaps = 5/83 (6%) Query 19 ALRRVEAGPDG---HEYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVD 75 AL R E+GP G Y VR V ARA K+YRCPGCDH+IR G AH+V WP + G + Sbjct 28 ALMRQESGPAGDADESYIVRTVPGARATKSYRCPGCDHDIRPGVAHLVTWPAEY--GGAE 85 Query 76 DRRHWHTPCWANRATRGPTRKWT 98 DRRHWHT CW+ R+TRG TR+W+ Sbjct 86 DRRHWHTGCWSGRSTRGLTRRWS 108 >gi|111018462|ref|YP_701434.1| hypothetical protein RHA1_ro01458 [Rhodococcus jostii RHA1] gi|110817992|gb|ABG93276.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=108 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 46/83 (56%), Positives = 59/83 (72%), Gaps = 5/83 (6%) Query 19 ALRRVEAGPDGH---EYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVD 75 A+ R EAGP G+ + VR + ARA K+YRCPGCDH+IR G AH+V WP + G + Sbjct 28 AMMRQEAGPAGYADESFIVRTIPGARATKSYRCPGCDHDIRPGVAHLVTWPAEY--GGAE 85 Query 76 DRRHWHTPCWANRATRGPTRKWT 98 DRRHWHT CW+ R+TRG TR+W+ Sbjct 86 DRRHWHTGCWSGRSTRGLTRRWS 108 >gi|256380102|ref|YP_003103762.1| hypothetical protein Amir_6109 [Actinosynnema mirum DSM 43827] gi|255924405|gb|ACU39916.1| hypothetical protein Amir_6109 [Actinosynnema mirum DSM 43827] Length=110 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/99 (54%), Positives = 61/99 (62%), Gaps = 8/99 (8%) Query 3 RRRKPLHRQRPEPPS---WALRRVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGT 59 RR +P H P P WA R E+G DG E+ VR ++ A KTYRCPGCDHEIR GT Sbjct 16 RRNRPKHTGEPSTPGGHGWA--RSESGSDG-EWLVRAISGAGTTKTYRCPGCDHEIRPGT 72 Query 60 AHVVVWPTDLPQAGVDDRRHWHTPCWANRATRGP-TRKW 97 HVV WP V+DRRHWH CW RA RGP +R+W Sbjct 73 PHVVAWPA-ADYGSVEDRRHWHQSCWNARARRGPSSRRW 110 >gi|312139185|ref|YP_004006521.1| hypothetical protein REQ_17671 [Rhodococcus equi 103S] gi|311888524|emb|CBH47836.1| conserved hypothetical protein [Rhodococcus equi 103S] Length=110 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/83 (60%), Positives = 58/83 (70%), Gaps = 5/83 (6%) Query 19 ALRRVEAGPDGHE---YEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVD 75 AL R E+GP G++ + VR + ARA K+YRCPGCD E+R G AHVV WP D G D Sbjct 30 ALAREESGPAGYDDERFMVRQIPGARATKSYRCPGCDQEVRPGVAHVVAWPAD--PGGAD 87 Query 76 DRRHWHTPCWANRATRGPTRKWT 98 DRRHWHT CWA R TRG TR+W+ Sbjct 88 DRRHWHTGCWAGRRTRGLTRRWS 110 >gi|256390440|ref|YP_003112004.1| hypothetical protein Caci_1238 [Catenulispora acidiphila DSM 44928] gi|256356666|gb|ACU70163.1| hypothetical protein Caci_1238 [Catenulispora acidiphila DSM 44928] Length=106 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 38/70 (55%), Positives = 47/70 (68%), Gaps = 0/70 (0%) Query 22 RVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRRHWH 81 R+E GPDG ++ VR + A K YRCPGC+ EIR+G H+V WP + GV DRRHWH Sbjct 34 RIEPGPDGRDWAVRGIPGQAAQKVYRCPGCEQEIRAGVPHIVAWPKEDHGIGVQDRRHWH 93 Query 82 TPCWANRATR 91 TPCW R+ R Sbjct 94 TPCWNARSRR 103 >gi|269128095|ref|YP_003301465.1| hypothetical protein Tcur_3898 [Thermomonospora curvata DSM 43183] gi|268313053|gb|ACY99427.1| hypothetical protein Tcur_3898 [Thermomonospora curvata DSM 43183] Length=106 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 44/77 (58%), Positives = 49/77 (64%), Gaps = 3/77 (3%) Query 17 SWALRRVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDD 76 S+ L E GPDG ++ VR +A A AVK YRCPGCD EI G HVV WP D G D+ Sbjct 22 SFGLENREEGPDG-DWIVREIAPANAVKVYRCPGCDQEIAPGVGHVVAWPADW--GGPDE 78 Query 77 RRHWHTPCWANRATRGP 93 RRHWH PCW R RGP Sbjct 79 RRHWHKPCWRARLHRGP 95 >gi|54023039|ref|YP_117281.1| hypothetical protein nfa10720 [Nocardia farcinica IFM 10152] gi|54014547|dbj|BAD55917.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=101 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 50/85 (59%), Positives = 55/85 (65%), Gaps = 4/85 (4%) Query 15 PPSWALRRVEAGPDGHE-YEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAG 73 P S VE GPDG E Y VR + AARA+KTYRCPGCDHEI G AH+V WP G Sbjct 20 PLSDVFGSVEPGPDGDEDYAVRTIPAARALKTYRCPGCDHEIAPGVAHIVAWPR---FGG 76 Query 74 VDDRRHWHTPCWANRATRGPTRKWT 98 DDRRHWH CW R TR TR+W+ Sbjct 77 EDDRRHWHRGCWNGRRTRRITRRWS 101 >gi|325673510|ref|ZP_08153201.1| ATP/GTP-binding protein [Rhodococcus equi ATCC 33707] gi|325555531|gb|EGD25202.1| ATP/GTP-binding protein [Rhodococcus equi ATCC 33707] Length=80 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 47/82 (58%), Positives = 57/82 (70%), Gaps = 5/82 (6%) Query 20 LRRVEAGPDGHE---YEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDD 76 + R E+GP G++ + VR + ARA K+YRCPGCD E+R G AHVV WP D G DD Sbjct 1 MAREESGPAGYDDERFMVRQIPGARATKSYRCPGCDQEVRPGVAHVVAWPAD--PGGADD 58 Query 77 RRHWHTPCWANRATRGPTRKWT 98 RRHWHT CWA R TRG TR+W+ Sbjct 59 RRHWHTGCWAGRRTRGLTRRWS 80 >gi|302529749|ref|ZP_07282091.1| predicted protein [Streptomyces sp. AA4] gi|302438644|gb|EFL10460.1| predicted protein [Streptomyces sp. AA4] Length=101 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/64 (63%), Positives = 46/64 (72%), Gaps = 2/64 (3%) Query 22 RVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRRHWH 81 R E+ PDG ++ VR V ++A KTYRCPGCDHEIR G H+VVWP D GV DRRHWH Sbjct 28 RSESAPDG-DWLVRTVPGSQAAKTYRCPGCDHEIRPGVPHLVVWPAD-ETGGVADRRHWH 85 Query 82 TPCW 85 PCW Sbjct 86 RPCW 89 >gi|258654028|ref|YP_003203184.1| hypothetical protein Namu_3902 [Nakamurella multipartita DSM 44233] gi|258557253|gb|ACV80195.1| hypothetical protein Namu_3902 [Nakamurella multipartita DSM 44233] Length=99 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 41/73 (57%), Positives = 45/73 (62%), Gaps = 5/73 (6%) Query 22 RVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTD---LPQAGVDDRR 78 R E G G E+ VR V A K YRCPGC IR G AH+VVWP D QAG+ DRR Sbjct 28 RTETGAGGREWMVRSVGGAE--KAYRCPGCQQLIRPGLAHLVVWPADHLFGEQAGLGDRR 85 Query 79 HWHTPCWANRATR 91 HWHTPCW R+ R Sbjct 86 HWHTPCWRGRSGR 98 >gi|271963228|ref|YP_003337424.1| hypothetical protein Sros_1690 [Streptosporangium roseum DSM 43021] gi|270506403|gb|ACZ84681.1| hypothetical protein Sros_1690 [Streptosporangium roseum DSM 43021] Length=107 Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 41/77 (54%), Positives = 49/77 (64%), Gaps = 3/77 (3%) Query 19 ALRRVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRR 78 + +VE PDG ++ VR V + A K YRCPGCD EIR+G H+V WP G D+RR Sbjct 31 GVDQVEEWPDG-DWHVRRVTGSGADKVYRCPGCDQEIRAGLPHLVSWPA--WAGGEDERR 87 Query 79 HWHTPCWANRATRGPTR 95 HWHT CW NR RGP R Sbjct 88 HWHTACWRNRVKRGPGR 104 >gi|300789552|ref|YP_003769843.1| hypothetical protein AMED_7733 [Amycolatopsis mediterranei U32] gi|299799066|gb|ADJ49441.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] Length=101 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 46/91 (51%), Positives = 53/91 (59%), Gaps = 8/91 (8%) Query 1 MARRRKPLHRQRPEPPSWAL------RRVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHE 54 M RR +P R PP L R E+G DG ++ VR V ++A K YRCPGCDHE Sbjct 1 MPRRNRPGRRSDGGPPERDLGAATGWARAESGTDG-DWLVRTVPGSQATKFYRCPGCDHE 59 Query 55 IRSGTAHVVVWPTDLPQAGVDDRRHWHTPCW 85 IR GT H+VVWP D V DRRHWH CW Sbjct 60 IRPGTPHLVVWPAD-ETGSVADRRHWHRACW 89 >gi|312194836|ref|YP_004014897.1| hypothetical protein FraEuI1c_0954 [Frankia sp. EuI1c] gi|311226172|gb|ADP79027.1| hypothetical protein FraEuI1c_0954 [Frankia sp. EuI1c] Length=103 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/93 (47%), Positives = 53/93 (57%), Gaps = 8/93 (8%) Query 2 ARRRKPLHRQRPEP--PSWALRRVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGT 59 R RK HR+ + P W + V +G ++ RPV A + K+YRCPGCDHEI G Sbjct 10 GRPRKDRHREDEQESRPGWLVESVVI--NGEDWSQRPVTGAASGKSYRCPGCDHEISPGV 67 Query 60 AHVVVWPTDLPQAGVDDRRHWHTPCWANRATRG 92 H+VVWP+ D RRHWHTPCWA R G Sbjct 68 PHMVVWPSGR----TDSRRHWHTPCWARRRAGG 96 >gi|302869553|ref|YP_003838190.1| hypothetical protein Micau_5106 [Micromonospora aurantiaca ATCC 27029] gi|315503985|ref|YP_004082872.1| hypothetical protein ML5_3205 [Micromonospora sp. L5] gi|302572412|gb|ADL48614.1| hypothetical protein Micau_5106 [Micromonospora aurantiaca ATCC 27029] gi|315410604|gb|ADU08721.1| hypothetical protein ML5_3205 [Micromonospora sp. L5] Length=110 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 34/64 (54%), Positives = 44/64 (69%), Gaps = 1/64 (1%) Query 31 EYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRRHWHTPCWANRAT 90 +++VR ++ +VKTYRCPGCD EIR G AH+V WP D + + DRRHWH+ CW R Sbjct 37 DWQVRAISGGASVKTYRCPGCDQEIRPGVAHLVAWPAD-DRGDLTDRRHWHSGCWRARDR 95 Query 91 RGPT 94 RGP Sbjct 96 RGPN 99 >gi|324999736|ref|ZP_08120848.1| hypothetical protein PseP1_13256 [Pseudonocardia sp. P1] Length=78 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 38/62 (62%), Positives = 43/62 (70%), Gaps = 2/62 (3%) Query 24 EAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRRHWHTP 83 E+G DG E+ VR V +VK YRCPGCD + SGT HVV WP D P GV+DRRHWH P Sbjct 6 ESGRDG-EWNVRRVPGGSSVKNYRCPGCDQLLPSGTPHVVAWPADDP-GGVEDRRHWHLP 63 Query 84 CW 85 CW Sbjct 64 CW 65 >gi|238060756|ref|ZP_04605465.1| hypothetical protein MCAG_01722 [Micromonospora sp. ATCC 39149] gi|237882567|gb|EEP71395.1| hypothetical protein MCAG_01722 [Micromonospora sp. ATCC 39149] Length=111 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 34/63 (54%), Positives = 44/63 (70%), Gaps = 1/63 (1%) Query 31 EYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRRHWHTPCWANRAT 90 +++VR ++ +VKTYRCPGCD EIR G AH+V WP D + + DRRHWH+ CW R Sbjct 38 DWQVRGISGGASVKTYRCPGCDQEIRPGVAHLVAWPAD-DRGDLTDRRHWHSGCWRARDR 96 Query 91 RGP 93 RGP Sbjct 97 RGP 99 >gi|317507970|ref|ZP_07965663.1| hypothetical protein HMPREF9336_02035 [Segniliparus rugosus ATCC BAA-974] gi|316253739|gb|EFV13116.1| hypothetical protein HMPREF9336_02035 [Segniliparus rugosus ATCC BAA-974] Length=104 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 39/76 (52%), Positives = 45/76 (60%), Gaps = 4/76 (5%) Query 12 RPEPPSWALRRV--EAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDL 69 RP+P + R E+G DG EY V V A+A K YRCPGCDHEIR G H+V W Sbjct 19 RPQPAQSSFRYATSESGADGDEYIVVSVPGAKATKVYRCPGCDHEIRVGEPHLVAWSAFD 78 Query 70 PQAGVDDRRHWHTPCW 85 AG +RRHWH CW Sbjct 79 AAAG--ERRHWHRACW 92 >gi|330469821|ref|YP_004407564.1| hypothetical protein VAB18032_29466 [Verrucosispora maris AB-18-032] gi|328812792|gb|AEB46964.1| hypothetical protein VAB18032_29466 [Verrucosispora maris AB-18-032] Length=108 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 33/64 (52%), Positives = 43/64 (68%), Gaps = 1/64 (1%) Query 31 EYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRRHWHTPCWANRAT 90 +++VR ++ +VKTYRCPGCD EIR G AH+V WP D + + DRRHWH+ CW R Sbjct 35 DWQVRGISGGSSVKTYRCPGCDQEIRPGVAHLVAWPAD-GRGDLTDRRHWHSGCWRARDR 93 Query 91 RGPT 94 R P Sbjct 94 RAPV 97 >gi|296393007|ref|YP_003657891.1| hypothetical protein Srot_0578 [Segniliparus rotundus DSM 44985] gi|296180154|gb|ADG97060.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985] Length=103 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 40/70 (58%), Positives = 43/70 (62%), Gaps = 3/70 (4%) Query 17 SWALRRVEAGPDGHE-YEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVD 75 S+ EAGPDG E Y V V A+AVK YRCPGCDHEI G HVV WP AG Sbjct 24 SFRFATSEAGPDGEEEYVVVAVPGAKAVKAYRCPGCDHEIGVGEPHVVAWPAFDASAG-- 81 Query 76 DRRHWHTPCW 85 +RRHWH CW Sbjct 82 ERRHWHRSCW 91 >gi|111225265|ref|YP_716059.1| hypothetical protein FRAAL5915 [Frankia alni ACN14a] gi|111152797|emb|CAJ64540.1| Conserved hypothetical protein [Frankia alni ACN14a] Length=115 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 36/58 (63%), Positives = 40/58 (69%), Gaps = 4/58 (6%) Query 31 EYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRRHWHTPCWANR 88 E+ VRPV A K YRCPGCDHEI GTAH+VVWP + V+DRRHWH PCW R Sbjct 50 EWVVRPVTGAATAKVYRCPGCDHEINPGTAHLVVWPPER----VEDRRHWHRPCWDRR 103 >gi|291299123|ref|YP_003510401.1| hypothetical protein Snas_1605 [Stackebrandtia nassauensis DSM 44728] gi|290568343|gb|ADD41308.1| hypothetical protein Snas_1605 [Stackebrandtia nassauensis DSM 44728] Length=80 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/76 (49%), Positives = 46/76 (61%), Gaps = 4/76 (5%) Query 19 ALRRVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRR 78 ++ VE GPDG + VR + + KTYRCPGCD EI G H+V WP D ++RR Sbjct 4 GVQAVEDGPDG-RWHVRNLPGGGSAKTYRCPGCDQEIPPGVPHLVAWPAD---GSTEERR 59 Query 79 HWHTPCWANRATRGPT 94 HWH PCW R RGP+ Sbjct 60 HWHRPCWRARYRRGPS 75 >gi|229819810|ref|YP_002881336.1| hypothetical protein Bcav_1315 [Beutenbergia cavernae DSM 12333] gi|229565723|gb|ACQ79574.1| conserved hypothetical protein [Beutenbergia cavernae DSM 12333] Length=102 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/77 (50%), Positives = 46/77 (60%), Gaps = 5/77 (6%) Query 22 RVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTD---LPQAGVDDRR 78 R + DG + VR V+ ++YRCPGCD + GTAHVVVWP D A +DDRR Sbjct 28 RTQTRRDGSSWTVRSVSGGE--RSYRCPGCDQLVGPGTAHVVVWPADHLLGADAALDDRR 85 Query 79 HWHTPCWANRATRGPTR 95 HWH+ CW R TR P R Sbjct 86 HWHSACWQARDTRAPRR 102 >gi|296268897|ref|YP_003651529.1| hypothetical protein Tbis_0912 [Thermobispora bispora DSM 43833] gi|296091684|gb|ADG87636.1| hypothetical protein Tbis_0912 [Thermobispora bispora DSM 43833] Length=104 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/93 (49%), Positives = 55/93 (60%), Gaps = 6/93 (6%) Query 6 KPLHRQRPEPPSW--ALRRVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVV 63 +P R P W + R E PDG E+ VR V+ A + YRCPGC+ EIR G HVV Sbjct 14 RPGGRGSSRPIEWVAGIDRKEHAPDG-EWVVRHVSGA-TDRVYRCPGCEQEIRPGVPHVV 71 Query 64 VWPTDLPQAGVDDRRHWHTPCWANRATRGPTRK 96 WP + P G ++RRHWHT CW NR RGP R+ Sbjct 72 SWP-NWP-GGAEERRHWHTACWRNRINRGPLRR 102 >gi|337768191|emb|CCB76904.1| conserved protein of unknown function [Streptomyces cattleya NRRL 8057] Length=104 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/93 (50%), Positives = 52/93 (56%), Gaps = 9/93 (9%) Query 3 RRRKPLHRQRPEP----PSWALRRVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSG 58 RR +P +PEP L R E+ G E+ +RPVA + KTYRCPGCD EI G Sbjct 4 RRNRPNRAAKPEPRPDGDRHGLERTESW-RGEEWVMRPVAGS-GGKTYRCPGCDQEIPPG 61 Query 59 TAHVVVWPTDLPQAGVDDRRHWHTPCWANRATR 91 HVV WP GVDDRRHWH PCW R R Sbjct 62 VGHVVAWPE---FGGVDDRRHWHRPCWNARDRR 91 >gi|145596129|ref|YP_001160426.1| hypothetical protein Strop_3617 [Salinispora tropica CNB-440] gi|145305466|gb|ABP56048.1| hypothetical protein Strop_3617 [Salinispora tropica CNB-440] Length=134 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 34/64 (54%), Positives = 42/64 (66%), Gaps = 1/64 (1%) Query 31 EYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRRHWHTPCWANRAT 90 +++VR ++ +VKTYRCPGCD EIR G AHVVVWP + DRRHWH+ CW R Sbjct 61 DWQVRLISGGASVKTYRCPGCDQEIRPGVAHVVVWPAQ-GWGDLTDRRHWHSGCWRARDR 119 Query 91 RGPT 94 R P Sbjct 120 RAPI 123 >gi|288924014|ref|ZP_06418081.1| hypothetical protein FrEUN1fDRAFT_7779 [Frankia sp. EUN1f] gi|288344642|gb|EFC79104.1| hypothetical protein FrEUN1fDRAFT_7779 [Frankia sp. EUN1f] Length=74 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 36/60 (60%), Positives = 38/60 (64%), Gaps = 4/60 (6%) Query 32 YEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRRHWHTPCWANRATR 91 + VRPV A K YRCPGCDH I GT H VVWP +DDRRHWHTPCWA R R Sbjct 8 WVVRPVTGAATTKAYRCPGCDHLIELGTPHRVVWPV----GALDDRRHWHTPCWARRHAR 63 >gi|254382343|ref|ZP_04997703.1| ATP/GTP-binding protein [Streptomyces sp. Mg1] gi|194341248|gb|EDX22214.1| ATP/GTP-binding protein [Streptomyces sp. Mg1] Length=119 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/69 (58%), Positives = 44/69 (64%), Gaps = 5/69 (7%) Query 18 WALRRVEAGPDGHEYEVRPVAAARAV-KTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDD 76 + L R E G E++VR VA A AV K YRCPGCD EI SGT H+V WP GVDD Sbjct 36 YGLERTEE-YQGEEWKVRHVAGASAVGKRYRCPGCDQEIPSGTPHLVAWPE---YGGVDD 91 Query 77 RRHWHTPCW 85 RRHWH CW Sbjct 92 RRHWHKACW 100 >gi|117927876|ref|YP_872427.1| hypothetical protein Acel_0668 [Acidothermus cellulolyticus 11B] gi|117648339|gb|ABK52441.1| conserved hypothetical protein [Acidothermus cellulolyticus 11B] Length=106 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 33/63 (53%), Positives = 41/63 (66%), Gaps = 4/63 (6%) Query 23 VEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRRHWHT 82 V+ GPDG + R + + +VKTYRCPGCD EIR T H+V W P+ V+ RRHWHT Sbjct 33 VDIGPDGVPWVFRRITGSTSVKTYRCPGCDQEIRPATPHIVAW----PEGDVESRRHWHT 88 Query 83 PCW 85 CW Sbjct 89 ACW 91 >gi|296138989|ref|YP_003646232.1| hypothetical protein Tpau_1262 [Tsukamurella paurometabola DSM 20162] gi|296027123|gb|ADG77893.1| hypothetical protein Tpau_1262 [Tsukamurella paurometabola DSM 20162] Length=95 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/93 (45%), Positives = 50/93 (54%), Gaps = 9/93 (9%) Query 5 RKPLHRQRPEPPSWALR------RVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSG 58 ++P+ R+R P L RV+ G D Y+VR V A K YRCPGC I SG Sbjct 3 KRPVSRRRAGGPVRPLSAGGFGSRVDLGDD--AYQVRTVTGTAAAKDYRCPGCAQVIASG 60 Query 59 TAHVVVWPTDLPQAGVDDRRHWHTPCWANRATR 91 TAH+V WP GV +RRHWHT CW +R Sbjct 61 TAHIVAWPA-AESGGVTERRHWHTGCWRREVSR 92 >gi|159039527|ref|YP_001538780.1| hypothetical protein Sare_3999 [Salinispora arenicola CNS-205] gi|157918362|gb|ABV99789.1| conserved hypothetical protein [Salinispora arenicola CNS-205] Length=95 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 33/64 (52%), Positives = 41/64 (65%), Gaps = 1/64 (1%) Query 31 EYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRRHWHTPCWANRAT 90 +++VR ++ + KTYRCPGCD EIR G AHVVVWP + DRRHWH+ CW R Sbjct 22 DWQVRGISGGASAKTYRCPGCDQEIRPGVAHVVVWPAQ-GWGDLTDRRHWHSGCWRARDR 80 Query 91 RGPT 94 R P Sbjct 81 RAPI 84 >gi|297192025|ref|ZP_06909423.1| ATP/GTP-binding protein [Streptomyces pristinaespiralis ATCC 25486] gi|197719526|gb|EDY63434.1| ATP/GTP-binding protein [Streptomyces pristinaespiralis ATCC 25486] Length=109 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 36/58 (63%), Positives = 37/58 (64%), Gaps = 4/58 (6%) Query 29 GHEYEVRPVAAARAV-KTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRRHWHTPCW 85 G E+ VR VA A A K YRCPGCD EI SG HVV WP GVDDRRHWH CW Sbjct 36 GEEWSVRHVAGASAAGKRYRCPGCDQEISSGMPHVVAWPE---HGGVDDRRHWHKACW 90 >gi|297559333|ref|YP_003678307.1| ATP/GTP-binding protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843781|gb|ADH65801.1| putative ATP/GTP-binding protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length=110 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 38/73 (53%), Positives = 44/73 (61%), Gaps = 4/73 (5%) Query 21 RRVEAGPDGHEYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRRHW 80 +R E GPDG E+ R + A A K YRCPGC EI +G AHVV W P DDRRHW Sbjct 37 QRRETGPDG-EWVTRRIPGAAATKVYRCPGCAQEIPTGMAHVVAW---RPYGDGDDRRHW 92 Query 81 HTPCWANRATRGP 93 H+ CW R+ R P Sbjct 93 HSSCWDRRSHRAP 105 >gi|239990773|ref|ZP_04711437.1| putative ATP/GTP-binding protein [Streptomyces roseosporus NRRL 11379] Length=109 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/64 (55%), Positives = 40/64 (63%), Gaps = 4/64 (6%) Query 29 GHEYEVRPVAAARAV-KTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRRHWHTPCWAN 87 G E+ VRPV+ A A K YRCPGCD EI SG H+V WP G+DDRRHWH CW Sbjct 36 GEEWSVRPVSGASAQGKRYRCPGCDQEIPSGVPHLVAWPE---YGGIDDRRHWHKACWNA 92 Query 88 RATR 91 + R Sbjct 93 KDRR 96 >gi|295836469|ref|ZP_06823402.1| ATP/GTP-binding protein [Streptomyces sp. SPB74] gi|197699036|gb|EDY45969.1| ATP/GTP-binding protein [Streptomyces sp. SPB74] Length=109 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/75 (55%), Positives = 45/75 (60%), Gaps = 5/75 (6%) Query 18 WALRRVEAGPDGHEYEVRPVAAARAV-KTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDD 76 + L R E D E+ VR VA A A KTYRCPGCD EI SG HVV WP +GVD+ Sbjct 26 FGLHRTETWQD-EEWSVRHVAGASAAGKTYRCPGCDQEIPSGVPHVVAWPE---YSGVDE 81 Query 77 RRHWHTPCWANRATR 91 RRHWH CW R R Sbjct 82 RRHWHKACWNARDRR 96 >gi|256825621|ref|YP_003149581.1| hypothetical protein Ksed_18120 [Kytococcus sedentarius DSM 20547] gi|256689014|gb|ACV06816.1| hypothetical protein Ksed_18120 [Kytococcus sedentarius DSM 20547] Length=70 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 31/57 (55%), Positives = 37/57 (65%), Gaps = 1/57 (1%) Query 29 GHEYEVRPVAAARAVKTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRRHWHTPCW 85 G E+ VR + +K YRCPGC HE+ S T H VVWP D GV++RRHWHT CW Sbjct 12 GREFVVRTLRGNGELKVYRCPGCQHEVASSTGHYVVWPND-GMLGVEERRHWHTRCW 67 >gi|29829406|ref|NP_824040.1| ATP/GTP-binding protein [Streptomyces avermitilis MA-4680] gi|29606513|dbj|BAC70575.1| putative ATP/GTP-binding protein [Streptomyces avermitilis MA-4680] Length=110 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/59 (63%), Positives = 38/59 (65%), Gaps = 4/59 (6%) Query 28 DGHEYEVRPVAAARAV-KTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRRHWHTPCW 85 G E+ VR VA A A KTYRCPGCD I SG HVV WP AGVDDRRHWH CW Sbjct 36 QGEEWSVRHVAGASAEGKTYRCPGCDQMIPSGVPHVVAWPE---HAGVDDRRHWHKACW 91 >gi|291447786|ref|ZP_06587176.1| ATP/GTP-binding protein [Streptomyces roseosporus NRRL 15998] gi|291350733|gb|EFE77637.1| ATP/GTP-binding protein [Streptomyces roseosporus NRRL 15998] Length=113 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/64 (55%), Positives = 40/64 (63%), Gaps = 4/64 (6%) Query 29 GHEYEVRPVAAARAV-KTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRRHWHTPCWAN 87 G E+ VRPV+ A A K YRCPGCD EI SG H+V WP G+DDRRHWH CW Sbjct 40 GEEWSVRPVSGASAQGKRYRCPGCDQEIPSGVPHLVAWPE---YGGIDDRRHWHKACWNA 96 Query 88 RATR 91 + R Sbjct 97 KDRR 100 >gi|182435939|ref|YP_001823658.1| putative ATP/GTP-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326776563|ref|ZP_08235828.1| putative ATP/GTP-binding protein [Streptomyces cf. griseus XylebKG-1] gi|178464455|dbj|BAG18975.1| putative ATP/GTP-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326656896|gb|EGE41742.1| putative ATP/GTP-binding protein [Streptomyces griseus XylebKG-1] Length=109 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/64 (55%), Positives = 40/64 (63%), Gaps = 4/64 (6%) Query 29 GHEYEVRPVAAARAV-KTYRCPGCDHEIRSGTAHVVVWPTDLPQAGVDDRRHWHTPCWAN 87 G E+ VRPV+ A A K YRCPGCD EI SG H+V WP G+DDRRHWH CW Sbjct 36 GEEWSVRPVSGASAQGKRYRCPGCDQEIPSGVPHLVTWPE---FGGIDDRRHWHKACWNA 92 Query 88 RATR 91 + R Sbjct 93 KDRR 96 Lambda K H 0.321 0.135 0.484 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 130183417542 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40