BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1322A
Length=152
Score E
Sequences producing significant alignments: (Bits) Value
gi|15840776|ref|NP_335813.1| 4-hydroxyphenylpyruvate dioxygenase... 308 2e-82
gi|148822545|ref|YP_001287299.1| hypothetical protein TBFG_11354... 308 2e-82
gi|240169494|ref|ZP_04748153.1| hypothetical protein MkanA1_0928... 274 3e-72
gi|254821324|ref|ZP_05226325.1| methylmalonyl-CoA epimerase [Myc... 255 2e-66
gi|183984047|ref|YP_001852338.1| glyoxalase, GloA_1 [Mycobacteri... 254 4e-66
gi|118619147|ref|YP_907479.1| glyoxalase, GloA_1 [Mycobacterium ... 253 6e-66
gi|41408535|ref|NP_961371.1| hypothetical protein MAP2437 [Mycob... 248 2e-64
gi|342858017|ref|ZP_08714673.1| methylmalonyl-CoA epimerase [Myc... 248 2e-64
gi|254774363|ref|ZP_05215879.1| methylmalonyl-CoA epimerase [Myc... 247 4e-64
gi|296170264|ref|ZP_06851855.1| 4-hydroxyphenylpyruvate dioxygen... 244 3e-63
gi|15827584|ref|NP_301847.1| hypothetical protein ML1157 [Mycoba... 239 8e-62
gi|120405260|ref|YP_955089.1| glyoxalase/bleomycin resistance pr... 235 1e-60
gi|108800829|ref|YP_641026.1| methylmalonyl-CoA epimerase [Mycob... 235 2e-60
gi|315443390|ref|YP_004076269.1| methylmalonyl-CoA epimerase [My... 233 7e-60
gi|145222927|ref|YP_001133605.1| glyoxalase/bleomycin resistance... 233 8e-60
gi|126436427|ref|YP_001072118.1| methylmalonyl-CoA epimerase [My... 232 1e-59
gi|118470973|ref|YP_889176.1| methylmalonyl-CoA epimerase [Mycob... 227 4e-58
gi|333989965|ref|YP_004522579.1| glyoxalase [Mycobacterium sp. J... 223 7e-57
gi|169628553|ref|YP_001702202.1| hypothetical protein MAB_1462c ... 208 3e-52
gi|229493827|ref|ZP_04387604.1| methylmalonyl-CoA epimerase [Rho... 201 3e-50
gi|312139187|ref|YP_004006523.1| glyoxalase family protein [Rhod... 201 4e-50
gi|226360582|ref|YP_002778360.1| methylmalonyl-CoA epimerase [Rh... 199 9e-50
gi|111018460|ref|YP_701432.1| methylmalonyl-CoA epimerase [Rhodo... 199 1e-49
gi|226307382|ref|YP_002767342.1| methylmalonyl-CoA epimerase [Rh... 198 2e-49
gi|331695563|ref|YP_004331802.1| methylmalonyl-CoA epimerase [Ps... 195 2e-48
gi|319948452|ref|ZP_08022588.1| methylmalonyl-CoA epimerase [Die... 187 3e-46
gi|300783501|ref|YP_003763792.1| methylmalonyl-CoA epimerase [Am... 187 5e-46
gi|317125533|ref|YP_004099645.1| methylmalonyl-CoA epimerase [In... 186 8e-46
gi|54023041|ref|YP_117283.1| hypothetical protein nfa10740 [Noca... 185 2e-45
gi|284032871|ref|YP_003382802.1| methylmalonyl-CoA epimerase [Kr... 183 7e-45
gi|343927074|ref|ZP_08766561.1| putative methylmalonyl-CoA epime... 183 7e-45
gi|291303441|ref|YP_003514719.1| methylmalonyl-CoA epimerase [St... 182 2e-44
gi|84494509|ref|ZP_00993628.1| hypothetical protein JNB_06924 [J... 182 2e-44
gi|326385043|ref|ZP_08206715.1| methylmalonyl-CoA epimerase [Gor... 181 2e-44
gi|302524854|ref|ZP_07277196.1| methylmalonyl-CoA epimerase [Str... 181 4e-44
gi|262201888|ref|YP_003273096.1| methylmalonyl-CoA epimerase [Go... 180 5e-44
gi|119716030|ref|YP_922995.1| methylmalonyl-CoA epimerase [Nocar... 180 8e-44
gi|326332952|ref|ZP_08199209.1| methylmalonyl-CoA epimerase [Noc... 179 1e-43
gi|256380098|ref|YP_003103758.1| methylmalonyl-CoA epimerase [Ac... 179 1e-43
gi|330469813|ref|YP_004407556.1| glyoxalase/bleomycin resistance... 177 4e-43
gi|333920903|ref|YP_004494484.1| putative methylmalonyl-CoA epim... 176 1e-42
gi|284992494|ref|YP_003411048.1| methylmalonyl-CoA epimerase [Ge... 175 2e-42
gi|257056832|ref|YP_003134664.1| methylmalonyl-CoA epimerase [Sa... 174 3e-42
gi|159039521|ref|YP_001538774.1| glyoxalase/bleomycin resistance... 174 4e-42
gi|324999733|ref|ZP_08120845.1| glyoxalase family protein [Pseud... 174 6e-42
gi|311743998|ref|ZP_07717804.1| methylmalonyl-CoA epimerase [Aer... 173 7e-42
gi|256824792|ref|YP_003148752.1| methylmalonyl-CoA epimerase [Ky... 171 3e-41
gi|134102675|ref|YP_001108336.1| methylmalonyl-CoA epimerase [Sa... 171 3e-41
gi|238060751|ref|ZP_04605460.1| glyoxalase/bleomycin resistance ... 171 3e-41
gi|145596123|ref|YP_001160420.1| glyoxalase/bleomycin resistance... 171 4e-41
>gi|15840776|ref|NP_335813.1| 4-hydroxyphenylpyruvate dioxygenase C terminal domain-containing
protein [Mycobacterium tuberculosis CDC1551]
gi|31792518|ref|NP_855011.1| hypothetical protein Mb1357c [Mycobacterium bovis AF2122/97]
gi|57116847|ref|YP_177643.1| hypothetical protein Rv1322A [Mycobacterium tuberculosis H37Rv]
67 more sequence titles
Length=152
Score = 308 bits (789), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/152 (99%), Positives = 152/152 (100%), Gaps = 0/152 (0%)
Query 1 VMTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREA 60
+MTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREA
Sbjct 1 MMTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREA 60
Query 61 LLAVPGSAAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVY 120
LLAVPGSAAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVY
Sbjct 61 LLAVPGSAAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVY 120
Query 121 ETARRGTANSRINFIHPKDAGGVLIELVEPAP 152
ETARRGTANSRINFIHPKDAGGVLIELVEPAP
Sbjct 121 ETARRGTANSRINFIHPKDAGGVLIELVEPAP 152
>gi|148822545|ref|YP_001287299.1| hypothetical protein TBFG_11354 [Mycobacterium tuberculosis F11]
gi|167967596|ref|ZP_02549873.1| hypothetical protein MtubH3_06002 [Mycobacterium tuberculosis
H37Ra]
gi|254364220|ref|ZP_04980266.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
10 more sequence titles
Length=151
Score = 308 bits (788), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/151 (100%), Positives = 151/151 (100%), Gaps = 0/151 (0%)
Query 2 MTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREAL 61
MTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREAL
Sbjct 1 MTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREAL 60
Query 62 LAVPGSAAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYE 121
LAVPGSAAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYE
Sbjct 61 LAVPGSAAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYE 120
Query 122 TARRGTANSRINFIHPKDAGGVLIELVEPAP 152
TARRGTANSRINFIHPKDAGGVLIELVEPAP
Sbjct 121 TARRGTANSRINFIHPKDAGGVLIELVEPAP 151
>gi|240169494|ref|ZP_04748153.1| hypothetical protein MkanA1_09286 [Mycobacterium kansasii ATCC
12478]
Length=151
Score = 274 bits (701), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/150 (88%), Positives = 140/150 (94%), Gaps = 0/150 (0%)
Query 2 MTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREAL 61
MTTDQV AR ++ATSLVTGLDHVGIAVADLD AIEWYH+HLGMILVHEE+NDDQGIREA+
Sbjct 1 MTTDQVDARQVVATSLVTGLDHVGIAVADLDAAIEWYHEHLGMILVHEELNDDQGIREAM 60
Query 62 LAVPGSAAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYE 121
LAVPGS AQIQLMAP+DESS IAKFL KRGPGIQQ ACRV+DLDA+ RRLRSQGVRLVYE
Sbjct 61 LAVPGSTAQIQLMAPMDESSAIAKFLQKRGPGIQQFACRVADLDALSRRLRSQGVRLVYE 120
Query 122 TARRGTANSRINFIHPKDAGGVLIELVEPA 151
RRGTANSRINFIHPKDAGGVLIELVEPA
Sbjct 121 APRRGTANSRINFIHPKDAGGVLIELVEPA 150
>gi|254821324|ref|ZP_05226325.1| methylmalonyl-CoA epimerase [Mycobacterium intracellulare ATCC
13950]
Length=154
Score = 255 bits (651), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/153 (82%), Positives = 135/153 (89%), Gaps = 3/153 (1%)
Query 2 MTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREAL 61
MTTDQV AR +LATSLVT +DHVGIAVADLD AI+WYHDHLGMILVHEE+N++QGIREA+
Sbjct 1 MTTDQVDARQILATSLVTAIDHVGIAVADLDAAIDWYHDHLGMILVHEEVNEEQGIREAM 60
Query 62 LAV---PGSAAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRL 118
LAV P AQIQLMAP+DESS IAKFLDKRGPGIQQ+A RVSDLDAM RLR QGVRL
Sbjct 61 LAVRGAPAGTAQIQLMAPIDESSTIAKFLDKRGPGIQQMAVRVSDLDAMVERLREQGVRL 120
Query 119 VYETARRGTANSRINFIHPKDAGGVLIELVEPA 151
+Y+ RRGTANSRINFIHPKD GGVLIELVEPA
Sbjct 121 IYDAPRRGTANSRINFIHPKDGGGVLIELVEPA 153
>gi|183984047|ref|YP_001852338.1| glyoxalase, GloA_1 [Mycobacterium marinum M]
gi|183177373|gb|ACC42483.1| glyoxalase, GloA_1 [Mycobacterium marinum M]
Length=155
Score = 254 bits (648), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 123/152 (81%), Positives = 136/152 (90%), Gaps = 2/152 (1%)
Query 2 MTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREAL 61
MTTDQV AR +L TSLVTGLDHVGIAVADLD AIEWYHDHLG+ILVHEE+NDDQGIREA+
Sbjct 1 MTTDQVDARQILETSLVTGLDHVGIAVADLDAAIEWYHDHLGLILVHEEVNDDQGIREAM 60
Query 62 LAVPGS--AAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLV 119
LAVP + QIQLMAP+DESSVIAKFL KRGPGIQQ ACRV +L+ + +LR+QG+RLV
Sbjct 61 LAVPSAPETTQIQLMAPIDESSVIAKFLHKRGPGIQQFACRVRNLEKLSEQLRAQGIRLV 120
Query 120 YETARRGTANSRINFIHPKDAGGVLIELVEPA 151
YET RRGTA+SRINFIHPKDAGGVLIELVEPA
Sbjct 121 YETPRRGTADSRINFIHPKDAGGVLIELVEPA 152
>gi|118619147|ref|YP_907479.1| glyoxalase, GloA_1 [Mycobacterium ulcerans Agy99]
gi|118571257|gb|ABL06008.1| glyoxalase, GloA_1 [Mycobacterium ulcerans Agy99]
Length=155
Score = 253 bits (646), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 122/152 (81%), Positives = 136/152 (90%), Gaps = 2/152 (1%)
Query 2 MTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREAL 61
MTTDQV AR +L TSLVTGLDHVGIAVADLD AI+WYHDHLG+ILVHEE+NDDQGIREA+
Sbjct 1 MTTDQVDARQILETSLVTGLDHVGIAVADLDAAIKWYHDHLGLILVHEEVNDDQGIREAM 60
Query 62 LAVPGS--AAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLV 119
LAVP + QIQLMAP+DESSVIAKFL KRGPGIQQ ACRV +L+ + +LR+QG+RLV
Sbjct 61 LAVPSAPETTQIQLMAPIDESSVIAKFLQKRGPGIQQFACRVRNLEKLSEQLRAQGIRLV 120
Query 120 YETARRGTANSRINFIHPKDAGGVLIELVEPA 151
YET RRGTA+SRINFIHPKDAGGVLIELVEPA
Sbjct 121 YETPRRGTADSRINFIHPKDAGGVLIELVEPA 152
>gi|41408535|ref|NP_961371.1| hypothetical protein MAP2437 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118467035|ref|YP_880779.1| methylmalonyl-CoA epimerase [Mycobacterium avium 104]
gi|41396893|gb|AAS04754.1| hypothetical protein MAP_2437 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118168322|gb|ABK69219.1| methylmalonyl-CoA epimerase [Mycobacterium avium 104]
gi|336460970|gb|EGO39851.1| methylmalonyl-CoA epimerase [Mycobacterium avium subsp. paratuberculosis
S397]
Length=154
Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/153 (79%), Positives = 134/153 (88%), Gaps = 3/153 (1%)
Query 2 MTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREAL 61
MTTDQV AR +LAT+LVT +DHVGIAVADLD AI WYHDHLGMILVHEE+N++QGIREA+
Sbjct 1 MTTDQVDARQVLATALVTAIDHVGIAVADLDAAIAWYHDHLGMILVHEEVNEEQGIREAM 60
Query 62 LAV---PGSAAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRL 118
LAV P AQ+QLMAP+D+SS IAKFLDKRGPGIQQ+A RVSDLD + RLR QGVRL
Sbjct 61 LAVRGAPAGTAQLQLMAPIDDSSTIAKFLDKRGPGIQQMAMRVSDLDTLIERLREQGVRL 120
Query 119 VYETARRGTANSRINFIHPKDAGGVLIELVEPA 151
+Y+ RRGTANSRINFIHPKDAGGVLIELVEPA
Sbjct 121 IYDAPRRGTANSRINFIHPKDAGGVLIELVEPA 153
>gi|342858017|ref|ZP_08714673.1| methylmalonyl-CoA epimerase [Mycobacterium colombiense CECT 3035]
gi|342135350|gb|EGT88516.1| methylmalonyl-CoA epimerase [Mycobacterium colombiense CECT 3035]
Length=154
Score = 248 bits (633), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/153 (80%), Positives = 133/153 (87%), Gaps = 3/153 (1%)
Query 2 MTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREAL 61
MTTDQV AR +LATSLVT +DHVGIAVADLD AI WYHD LGMILVHEE+N++QGIREA+
Sbjct 1 MTTDQVDARQILATSLVTAIDHVGIAVADLDAAIAWYHDTLGMILVHEEVNEEQGIREAM 60
Query 62 LAV---PGSAAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRL 118
LAV P AQIQLMAP+DESS IAKFLDKRGPGIQQ+A RVSDLDA+ +LR QGVRL
Sbjct 61 LAVRGAPAGTAQIQLMAPIDESSTIAKFLDKRGPGIQQMAVRVSDLDALVEQLREQGVRL 120
Query 119 VYETARRGTANSRINFIHPKDAGGVLIELVEPA 151
+Y+ RRGTANSRINFIHPKD GGVLIELVEPA
Sbjct 121 IYDAPRRGTANSRINFIHPKDGGGVLIELVEPA 153
>gi|254774363|ref|ZP_05215879.1| methylmalonyl-CoA epimerase [Mycobacterium avium subsp. avium
ATCC 25291]
Length=154
Score = 247 bits (631), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 120/153 (79%), Positives = 135/153 (89%), Gaps = 3/153 (1%)
Query 2 MTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREAL 61
MTTDQV AR +LAT+LVT +DHVGIAVADLD AI WYHDHLGMILVHEE+N++QGIREA+
Sbjct 1 MTTDQVDARQVLATALVTAIDHVGIAVADLDAAIAWYHDHLGMILVHEEVNEEQGIREAM 60
Query 62 LAVPGS---AAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRL 118
LAV G+ AQ+QLMAP+D+SS IAKFLDKRGPGIQQ+A RVSDLD + RLR QGVRL
Sbjct 61 LAVRGAPVGTAQLQLMAPIDDSSTIAKFLDKRGPGIQQMAMRVSDLDTLIERLREQGVRL 120
Query 119 VYETARRGTANSRINFIHPKDAGGVLIELVEPA 151
+Y+ RRGTANSRINFIHPKDAGGVLIELVEPA
Sbjct 121 IYDAPRRGTANSRINFIHPKDAGGVLIELVEPA 153
>gi|296170264|ref|ZP_06851855.1| 4-hydroxyphenylpyruvate dioxygenase C domain protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295894987|gb|EFG74706.1| 4-hydroxyphenylpyruvate dioxygenase C domain protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length=155
Score = 244 bits (623), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 117/154 (76%), Positives = 135/154 (88%), Gaps = 3/154 (1%)
Query 1 VMTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREA 60
+MTTDQV AR +LA++LVT +DHVGIAVADLD AI WYHDHLGM+++HEE+N+DQGIREA
Sbjct 1 MMTTDQVDARQVLASALVTAIDHVGIAVADLDAAIAWYHDHLGMVVMHEEVNEDQGIREA 60
Query 61 LLAV---PGSAAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVR 117
+LAV P AQIQLMAP+D+SS IAKFLDKRGPGIQQ+A RVSDLD + LRSQG+R
Sbjct 61 MLAVRGAPAGTAQIQLMAPIDDSSTIAKFLDKRGPGIQQMAVRVSDLDRVIEHLRSQGIR 120
Query 118 LVYETARRGTANSRINFIHPKDAGGVLIELVEPA 151
L+Y+ RRGTANSRINFIHPKDAGGVLIELVEPA
Sbjct 121 LIYDAPRRGTANSRINFIHPKDAGGVLIELVEPA 154
>gi|15827584|ref|NP_301847.1| hypothetical protein ML1157 [Mycobacterium leprae TN]
gi|221230061|ref|YP_002503477.1| hypothetical protein MLBr_01157 [Mycobacterium leprae Br4923]
gi|466927|gb|AAA50902.1| B1549_F2_87 [Mycobacterium leprae]
gi|13093135|emb|CAC31538.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933168|emb|CAR71252.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=155
Score = 239 bits (611), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 115/154 (75%), Positives = 135/154 (88%), Gaps = 3/154 (1%)
Query 1 VMTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREA 60
+MTTDQ++ +LAT+LV +DHVGIAVADL+ AI WYHDHLGMILVHEE+NDDQGIREA
Sbjct 1 MMTTDQINTCQLLATTLVITIDHVGIAVADLNAAISWYHDHLGMILVHEEVNDDQGIREA 60
Query 61 LLAVPGS---AAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVR 117
+L+ G+ QIQLMAP++ESS IAKFLDK GPGIQQLACRVSDLD + +RLR+QGVR
Sbjct 61 MLSAHGAPIGTTQIQLMAPINESSPIAKFLDKHGPGIQQLACRVSDLDRLTKRLRAQGVR 120
Query 118 LVYETARRGTANSRINFIHPKDAGGVLIELVEPA 151
LVY+T R+GT+N+RINFIHPKDAGGVLIELVEPA
Sbjct 121 LVYDTPRQGTSNARINFIHPKDAGGVLIELVEPA 154
>gi|120405260|ref|YP_955089.1| glyoxalase/bleomycin resistance protein/dioxygenase [Mycobacterium
vanbaalenii PYR-1]
gi|119958078|gb|ABM15083.1| methylmalonyl-CoA epimerase [Mycobacterium vanbaalenii PYR-1]
Length=161
Score = 235 bits (600), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 111/153 (73%), Positives = 134/153 (88%), Gaps = 3/153 (1%)
Query 2 MTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREAL 61
MT +Q AR +LAT+LVT +DHVGIAV DLD AI+WYHDHLGMI++HEE+N++QG+REA+
Sbjct 1 MTAEQTDARPVLATALVTAIDHVGIAVPDLDAAIKWYHDHLGMIVLHEEVNEEQGVREAM 60
Query 62 LAVPGSA---AQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRL 118
L V G+A AQIQLM+PLDE+S IAKF+DKRGPG+QQLA R SD+DA+ RLR QGVRL
Sbjct 61 LTVRGAAVGSAQIQLMSPLDETSTIAKFIDKRGPGLQQLAYRTSDIDALSERLREQGVRL 120
Query 119 VYETARRGTANSRINFIHPKDAGGVLIELVEPA 151
+Y+T RRGTA+SRINF+HPKDAGGVLIELVEPA
Sbjct 121 LYDTPRRGTADSRINFVHPKDAGGVLIELVEPA 153
>gi|108800829|ref|YP_641026.1| methylmalonyl-CoA epimerase [Mycobacterium sp. MCS]
gi|119869969|ref|YP_939921.1| methylmalonyl-CoA epimerase [Mycobacterium sp. KMS]
gi|108771248|gb|ABG09970.1| methylmalonyl-CoA epimerase [Mycobacterium sp. MCS]
gi|119696058|gb|ABL93131.1| methylmalonyl-CoA epimerase [Mycobacterium sp. KMS]
Length=156
Score = 235 bits (599), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/153 (73%), Positives = 133/153 (87%), Gaps = 3/153 (1%)
Query 2 MTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREAL 61
MT +Q+ AR +LAT+LVT +DHVGIAV DLD AI WYHDHLGMI++HEE+N++QGIREA+
Sbjct 1 MTAEQIDARPVLATALVTAIDHVGIAVPDLDEAIRWYHDHLGMIVLHEEVNEEQGIREAM 60
Query 62 LAVPGS---AAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRL 118
L+V G+ +AQIQLM+P+D+SS IAKFLDKRGPG+QQ A RVSDLD +C RLR QGVRL
Sbjct 61 LSVRGAPVGSAQIQLMSPIDDSSTIAKFLDKRGPGLQQFAYRVSDLDGLCERLREQGVRL 120
Query 119 VYETARRGTANSRINFIHPKDAGGVLIELVEPA 151
+Y+ RRGT+NSRINFIHPKD GGVLIELVEPA
Sbjct 121 IYDEPRRGTSNSRINFIHPKDGGGVLIELVEPA 153
>gi|315443390|ref|YP_004076269.1| methylmalonyl-CoA epimerase [Mycobacterium sp. Spyr1]
gi|315261693|gb|ADT98434.1| methylmalonyl-CoA epimerase [Mycobacterium sp. Spyr1]
Length=161
Score = 233 bits (594), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 110/153 (72%), Positives = 132/153 (87%), Gaps = 3/153 (1%)
Query 2 MTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREAL 61
MT +Q AR +LAT+LVT +DHVGIAV DLD AI+WYHDHLGMI++HEE+N++QG+REA+
Sbjct 1 MTAEQTDARPVLATALVTAIDHVGIAVPDLDAAIKWYHDHLGMIVLHEEVNEEQGVREAM 60
Query 62 LAVPGS---AAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRL 118
L+V G+ +AQIQLMAPLDE+S IAKFLDKRGPG+QQLA R SD+D + RLR QGVRL
Sbjct 61 LSVRGAPVGSAQIQLMAPLDETSTIAKFLDKRGPGLQQLAYRTSDIDTLSERLREQGVRL 120
Query 119 VYETARRGTANSRINFIHPKDAGGVLIELVEPA 151
+Y+ RRGT+NSRINFIHPKD GGVLIELVEPA
Sbjct 121 LYDAPRRGTSNSRINFIHPKDGGGVLIELVEPA 153
>gi|145222927|ref|YP_001133605.1| glyoxalase/bleomycin resistance protein/dioxygenase [Mycobacterium
gilvum PYR-GCK]
gi|145215413|gb|ABP44817.1| methylmalonyl-CoA epimerase [Mycobacterium gilvum PYR-GCK]
Length=168
Score = 233 bits (594), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 110/153 (72%), Positives = 132/153 (87%), Gaps = 3/153 (1%)
Query 2 MTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREAL 61
MT +Q AR +LAT+LVT +DHVGIAV DLD AI+WYHDHLGMI++HEE+N++QG+REA+
Sbjct 8 MTAEQTDARPVLATALVTAIDHVGIAVPDLDAAIKWYHDHLGMIVLHEEVNEEQGVREAM 67
Query 62 LAVPGS---AAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRL 118
L+V G+ +AQIQLMAPLDE+S IAKFLDKRGPG+QQLA R SD+D + RLR QGVRL
Sbjct 68 LSVRGAPVGSAQIQLMAPLDETSTIAKFLDKRGPGLQQLAYRTSDIDTLSERLREQGVRL 127
Query 119 VYETARRGTANSRINFIHPKDAGGVLIELVEPA 151
+Y+ RRGT+NSRINFIHPKD GGVLIELVEPA
Sbjct 128 LYDAPRRGTSNSRINFIHPKDGGGVLIELVEPA 160
>gi|126436427|ref|YP_001072118.1| methylmalonyl-CoA epimerase [Mycobacterium sp. JLS]
gi|126236227|gb|ABN99627.1| methylmalonyl-CoA epimerase [Mycobacterium sp. JLS]
Length=156
Score = 232 bits (592), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/153 (72%), Positives = 132/153 (87%), Gaps = 3/153 (1%)
Query 2 MTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREAL 61
MT +Q+ AR +LAT+LVT +DHVGIAV DLD AI WYHDHLGMI++HEE+N++QGIREA+
Sbjct 1 MTAEQIDARPVLATALVTAIDHVGIAVPDLDEAIRWYHDHLGMIVLHEEVNEEQGIREAM 60
Query 62 LAVPGS---AAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRL 118
L+V G+ + QIQLM+P+D+SS IAKFLDKRGPG+QQ A RVSDLD +C RLR QGVRL
Sbjct 61 LSVRGAPVGSTQIQLMSPIDDSSTIAKFLDKRGPGLQQFAYRVSDLDGLCERLREQGVRL 120
Query 119 VYETARRGTANSRINFIHPKDAGGVLIELVEPA 151
+Y+ RRGT+NSRINFIHPKD GGVLIEL+EPA
Sbjct 121 IYDEPRRGTSNSRINFIHPKDGGGVLIELLEPA 153
>gi|118470973|ref|YP_889176.1| methylmalonyl-CoA epimerase [Mycobacterium smegmatis str. MC2
155]
gi|118172260|gb|ABK73156.1| methylmalonyl-CoA epimerase [Mycobacterium smegmatis str. MC2
155]
Length=157
Score = 227 bits (579), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 107/154 (70%), Positives = 131/154 (86%), Gaps = 3/154 (1%)
Query 2 MTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREAL 61
MTT+ V AR LA++LVT +DHVGIAV DLD A +WYHDHLGMI++HEEIN++QG+REA+
Sbjct 1 MTTEHVDARPALASALVTAIDHVGIAVPDLDAAAKWYHDHLGMIVLHEEINEEQGVREAM 60
Query 62 LAV---PGSAAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRL 118
L+V P +AQIQL+AP+DE S IAKF+D RGPG+QQLA R SD+DA+ RLR+ GVRL
Sbjct 61 LSVRGAPKGSAQIQLLAPIDEKSTIAKFIDTRGPGLQQLAYRTSDIDALSDRLRADGVRL 120
Query 119 VYETARRGTANSRINFIHPKDAGGVLIELVEPAP 152
+Y+ +RGTANSRINFIHPKDAGGVLIELVEP+P
Sbjct 121 LYDAPKRGTANSRINFIHPKDAGGVLIELVEPSP 154
>gi|333989965|ref|YP_004522579.1| glyoxalase [Mycobacterium sp. JDM601]
gi|333485933|gb|AEF35325.1| glyoxalase GloA_1 [Mycobacterium sp. JDM601]
Length=164
Score = 223 bits (568), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 109/157 (70%), Positives = 131/157 (84%), Gaps = 7/157 (4%)
Query 2 MTTDQV----HARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGI 57
MTTD V R LA++LVT +DHVGIAV DL+ A +WYHD LGMI++HEE+ND+QGI
Sbjct 1 MTTDSVTDPFEVRSALASALVTAIDHVGIAVPDLEAAKKWYHDQLGMIVLHEEVNDEQGI 60
Query 58 REALLAVPGS---AAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQ 114
EA+LAV G+ +AQ+QLMAP+DESS IAKFLDKRGPG+QQLA R SD+DA+ +RLR Q
Sbjct 61 VEAMLAVRGAPVGSAQLQLMAPIDESSTIAKFLDKRGPGLQQLAYRTSDIDALSQRLRDQ 120
Query 115 GVRLVYETARRGTANSRINFIHPKDAGGVLIELVEPA 151
GVRL+Y+ RRGT+NSRINFIHPKDAGGVL+ELVEPA
Sbjct 121 GVRLLYDAPRRGTSNSRINFIHPKDAGGVLVELVEPA 157
>gi|169628553|ref|YP_001702202.1| hypothetical protein MAB_1462c [Mycobacterium abscessus ATCC
19977]
gi|169240520|emb|CAM61548.1| Conserved hypothetical protein (Glyoxalase/ Bleomycin resistance
protein?) [Mycobacterium abscessus]
Length=157
Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/143 (69%), Positives = 121/143 (85%), Gaps = 3/143 (2%)
Query 12 MLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGS---A 68
+L+T LVT +DHVGIAV DLDVAIEWYH+HLGMILVHEEIN+ QG+REA+L+ PG+ +
Sbjct 12 ILSTGLVTAIDHVGIAVPDLDVAIEWYHEHLGMILVHEEINEGQGVREAMLSFPGAEPGS 71
Query 69 AQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTA 128
AQIQLM+PL SS I KFLD +GPG+QQLA RV+D+DA+ +LR+ GVR++Y+ R GTA
Sbjct 72 AQIQLMSPLHASSPIGKFLDTKGPGLQQLAYRVTDIDALTDQLRAAGVRVLYDEPRIGTA 131
Query 129 NSRINFIHPKDAGGVLIELVEPA 151
NSRINF+HPKD GGVLIELV+P
Sbjct 132 NSRINFLHPKDTGGVLIELVQPT 154
>gi|229493827|ref|ZP_04387604.1| methylmalonyl-CoA epimerase [Rhodococcus erythropolis SK121]
gi|229319264|gb|EEN85108.1| methylmalonyl-CoA epimerase [Rhodococcus erythropolis SK121]
Length=160
Score = 201 bits (510), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/141 (68%), Positives = 116/141 (83%), Gaps = 3/141 (2%)
Query 13 LATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGSAA--- 69
L++ LV +DHVGIAV DLDVAI WY HLGM+ HEEIN+ QG+REA+L+V GS A
Sbjct 16 LSSDLVVAIDHVGIAVPDLDVAIAWYTQHLGMVSTHEEINESQGVREAMLSVVGSPAGST 75
Query 70 QIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTAN 129
+QL+APLDE+S IAKF+D+ GPG+QQLA RV+D+DA+ LR +GVRL+Y+ RRGTAN
Sbjct 76 AVQLLAPLDENSTIAKFIDRSGPGLQQLAYRVTDIDAISAELRDRGVRLLYDAPRRGTAN 135
Query 130 SRINFIHPKDAGGVLIELVEP 150
SRINFIHPKDAGGVL+ELVEP
Sbjct 136 SRINFIHPKDAGGVLVELVEP 156
>gi|312139187|ref|YP_004006523.1| glyoxalase family protein [Rhodococcus equi 103S]
gi|325673508|ref|ZP_08153199.1| 4-hydroxyphenylpyruvate dioxygenase C domain protein [Rhodococcus
equi ATCC 33707]
gi|311888526|emb|CBH47838.1| putative glyoxalase family protein [Rhodococcus equi 103S]
gi|325555529|gb|EGD25200.1| 4-hydroxyphenylpyruvate dioxygenase C domain protein [Rhodococcus
equi ATCC 33707]
Length=159
Score = 201 bits (510), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 94/142 (67%), Positives = 116/142 (82%), Gaps = 3/142 (2%)
Query 13 LATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPG---SAA 69
L + LVT +DHVGIAV DLD AI WY HLGM+ +HEE+N++QG+REA+L PG A
Sbjct 13 LTSELVTAIDHVGIAVPDLDAAIAWYGKHLGMVSLHEEVNEEQGVREAMLGYPGQVAGAT 72
Query 70 QIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTAN 129
IQL+APL+E+S IAKF+D+ GPG+QQLA RV+D+DA+ +LR+ GVRL+Y+ RRGTAN
Sbjct 73 AIQLLAPLNENSTIAKFIDRSGPGLQQLAFRVTDIDAISTQLRADGVRLLYDAPRRGTAN 132
Query 130 SRINFIHPKDAGGVLIELVEPA 151
SRINFIHPKD GGVLIELVEPA
Sbjct 133 SRINFIHPKDGGGVLIELVEPA 154
>gi|226360582|ref|YP_002778360.1| methylmalonyl-CoA epimerase [Rhodococcus opacus B4]
gi|226239067|dbj|BAH49415.1| putative methylmalonyl-CoA epimerase [Rhodococcus opacus B4]
Length=157
Score = 199 bits (507), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 90/142 (64%), Positives = 119/142 (84%), Gaps = 3/142 (2%)
Query 13 LATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAV---PGSAA 69
L++ LVT +DHVGIAV DLD AI WY +HLGM+ HEE+N++QG+REA+L+V P +
Sbjct 13 LSSDLVTAIDHVGIAVPDLDAAIAWYSEHLGMVSTHEEVNEEQGVREAMLSVVGAPEGST 72
Query 70 QIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTAN 129
+QL+APL+ESS IAKF+D+ GPG+QQLA RV+D+DA+ +LR +GVRL+Y+ RRGTA+
Sbjct 73 ALQLLAPLNESSTIAKFIDRSGPGLQQLAYRVTDIDAISAQLRERGVRLLYDAPRRGTAD 132
Query 130 SRINFIHPKDAGGVLIELVEPA 151
SRINF+HPKDAGGVL+ELVEP+
Sbjct 133 SRINFVHPKDAGGVLVELVEPS 154
>gi|111018460|ref|YP_701432.1| methylmalonyl-CoA epimerase [Rhodococcus jostii RHA1]
gi|110817990|gb|ABG93274.1| possible methylmalonyl-CoA epimerase [Rhodococcus jostii RHA1]
Length=157
Score = 199 bits (505), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 90/142 (64%), Positives = 120/142 (85%), Gaps = 3/142 (2%)
Query 13 LATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGS---AA 69
L++ LVT +DHVGIAV DLD AI WY +HLGM+ HEE+N++QG+REA+L+V GS +
Sbjct 13 LSSDLVTAIDHVGIAVPDLDAAIAWYSEHLGMVSTHEEVNEEQGVREAMLSVVGSPEGST 72
Query 70 QIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTAN 129
+QL+APL+E+S IAKF+D+ GPG+QQLA RV+D+DA+ +LR +GVRL+Y+ RRGTA+
Sbjct 73 ALQLLAPLNENSTIAKFIDRSGPGLQQLAYRVTDIDAISAQLRERGVRLLYDAPRRGTAD 132
Query 130 SRINFIHPKDAGGVLIELVEPA 151
SRINF+HPKDAGGVL+ELVEP+
Sbjct 133 SRINFVHPKDAGGVLVELVEPS 154
>gi|226307382|ref|YP_002767342.1| methylmalonyl-CoA epimerase [Rhodococcus erythropolis PR4]
gi|226186499|dbj|BAH34603.1| probable methylmalonyl-CoA epimerase [Rhodococcus erythropolis
PR4]
Length=157
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/141 (66%), Positives = 114/141 (81%), Gaps = 3/141 (2%)
Query 13 LATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAV---PGSAA 69
L++ LV +DHVGIAV DLD AI WY HLGM+ HEEIN+ QG+REA+L+V P +
Sbjct 13 LSSDLVVAIDHVGIAVPDLDAAIAWYTQHLGMVSTHEEINESQGVREAMLSVVGCPAGST 72
Query 70 QIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTAN 129
+QL+APLDE+S IAKF+D+ GPG+QQLA RV+D+DA+ LR +GVRL+Y+ RRGTAN
Sbjct 73 AVQLLAPLDENSTIAKFIDRSGPGLQQLAYRVTDIDAISAELRERGVRLLYDAPRRGTAN 132
Query 130 SRINFIHPKDAGGVLIELVEP 150
SRINFIHPKDAGGVL+ELVEP
Sbjct 133 SRINFIHPKDAGGVLVELVEP 153
>gi|331695563|ref|YP_004331802.1| methylmalonyl-CoA epimerase [Pseudonocardia dioxanivorans CB1190]
gi|326950252|gb|AEA23949.1| methylmalonyl-CoA epimerase [Pseudonocardia dioxanivorans CB1190]
Length=151
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/137 (68%), Positives = 114/137 (84%), Gaps = 1/137 (0%)
Query 16 SLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPG-SAAQIQLM 74
+LVT +DHVGIAVADLD AI WY D LG+ VH E N++QG+REA+LA PG S AQ+QL+
Sbjct 10 ALVTAVDHVGIAVADLDEAIAWYRDTLGLEAVHVETNEEQGVREAMLAAPGDSGAQVQLL 69
Query 75 APLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTANSRINF 134
APLDE+S IAKF+D+ GPGIQQLA RVSD+DA LR++G+RL+Y+ R GTA SR+NF
Sbjct 70 APLDETSTIAKFIDRNGPGIQQLAYRVSDIDAAGAALRAKGLRLLYDEPRNGTAGSRVNF 129
Query 135 IHPKDAGGVLIELVEPA 151
+HPKDAGGVL+ELVEPA
Sbjct 130 VHPKDAGGVLVELVEPA 146
>gi|319948452|ref|ZP_08022588.1| methylmalonyl-CoA epimerase [Dietzia cinnamea P4]
gi|319437872|gb|EFV92856.1| methylmalonyl-CoA epimerase [Dietzia cinnamea P4]
Length=156
Score = 187 bits (476), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 87/153 (57%), Positives = 118/153 (78%), Gaps = 4/153 (2%)
Query 2 MTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREAL 61
MTT + +L + LV +DHVG+AV D D A+ WY D+LGM +HEE+N++QG+REA+
Sbjct 1 MTTTPT-GQPLLPSELVVAIDHVGVAVPDFDAAVAWYRDNLGMENLHEEVNEEQGVREAM 59
Query 62 LAVPG---SAAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRL 118
L PG +A +Q++APLDE+S IAKF+D+ GPGIQQ+A RV+D+DA+ L +GVR+
Sbjct 60 LGSPGRPEGSALLQVLAPLDETSTIAKFIDRNGPGIQQMAVRVTDIDAITEHLTGRGVRV 119
Query 119 VYETARRGTANSRINFIHPKDAGGVLIELVEPA 151
+Y +RGTA+SRINF+HPKDAGGVL+ELVEPA
Sbjct 120 LYPAPKRGTADSRINFVHPKDAGGVLLELVEPA 152
>gi|300783501|ref|YP_003763792.1| methylmalonyl-CoA epimerase [Amycolatopsis mediterranei U32]
gi|299793015|gb|ADJ43390.1| methylmalonyl-CoA epimerase [Amycolatopsis mediterranei U32]
gi|340524887|gb|AEK40092.1| methylmalonyl-CoA epimerase [Amycolatopsis mediterranei S699]
Length=151
Score = 187 bits (474), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 88/138 (64%), Positives = 110/138 (80%), Gaps = 3/138 (2%)
Query 17 LVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGSAA---QIQL 73
VT +DHVGIAV DLD AIE++ H G+ + HEE+N++QG+REA+L PG+A QIQL
Sbjct 8 FVTAIDHVGIAVPDLDAAIEFHRAHFGLEVAHEEVNEEQGVREAMLRAPGTAGTETQIQL 67
Query 74 MAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTANSRIN 133
+APL E S I KFL K GPG+QQLA RVSD+DA LR QG+R++YE A+RGT+NSR+N
Sbjct 68 LAPLREDSAIGKFLTKSGPGLQQLAYRVSDVDAAAAALREQGLRMLYEEAKRGTSNSRVN 127
Query 134 FIHPKDAGGVLIELVEPA 151
F+HPKDAGGVL+ELVEPA
Sbjct 128 FVHPKDAGGVLVELVEPA 145
>gi|317125533|ref|YP_004099645.1| methylmalonyl-CoA epimerase [Intrasporangium calvum DSM 43043]
gi|315589621|gb|ADU48918.1| methylmalonyl-CoA epimerase [Intrasporangium calvum DSM 43043]
Length=147
Score = 186 bits (473), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/139 (64%), Positives = 111/139 (80%), Gaps = 0/139 (0%)
Query 13 LATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGSAAQIQ 72
LA L T +DHVGIAV DLD AI +Y GM L+HEE N++QG+REA++ V S + IQ
Sbjct 4 LAGPLFTHIDHVGIAVPDLDEAIAFYSGKYGMELLHEETNEEQGVREAMMGVGDSGSCIQ 63
Query 73 LMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTANSRI 132
L+APL S IAKFLD+ GPG+QQLA RV+D+DA+C LR +G+RL+Y+T +RGT+NSR+
Sbjct 64 LLAPLSPESTIAKFLDRSGPGMQQLAYRVTDIDAVCDTLRERGLRLLYDTPKRGTSNSRV 123
Query 133 NFIHPKDAGGVLIELVEPA 151
NFIHPKDAGGVL+ELVEPA
Sbjct 124 NFIHPKDAGGVLVELVEPA 142
>gi|54023041|ref|YP_117283.1| hypothetical protein nfa10740 [Nocardia farcinica IFM 10152]
gi|54014549|dbj|BAD55919.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=162
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/138 (62%), Positives = 111/138 (81%), Gaps = 3/138 (2%)
Query 18 VTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGS---AAQIQLM 74
V +DHVG+AV DLD AI WY ++LGM+ H E+N+ QG+ EA+L++PG+ A +QL+
Sbjct 21 VVAVDHVGVAVPDLDAAIAWYAENLGMVETHREVNESQGVHEAMLSLPGAPDGATALQLL 80
Query 75 APLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTANSRINF 134
APLDESS IAKF+D+ GPG+QQLA RV+D++A+ LR +G+RL+YE R GTA+SRINF
Sbjct 81 APLDESSTIAKFIDRNGPGLQQLAYRVTDIEAVSAYLRGRGLRLLYEAPRHGTADSRINF 140
Query 135 IHPKDAGGVLIELVEPAP 152
IHPKDAGGVL+ELVEP P
Sbjct 141 IHPKDAGGVLVELVEPNP 158
>gi|284032871|ref|YP_003382802.1| methylmalonyl-CoA epimerase [Kribbella flavida DSM 17836]
gi|283812164|gb|ADB34003.1| methylmalonyl-CoA epimerase [Kribbella flavida DSM 17836]
Length=145
Score = 183 bits (465), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 86/142 (61%), Positives = 111/142 (79%), Gaps = 1/142 (0%)
Query 11 HMLAT-SLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGSAA 69
H+ AT +L +DHVG+AVAD D A+ +Y + GM + HEE+N++QG+REA+L++ S +
Sbjct 3 HLTATQTLFEAIDHVGVAVADFDEAVRFYAETFGMTVAHEEVNEEQGVREAMLSIGDSGS 62
Query 70 QIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTAN 129
IQL+APL +SS IAKFLD+ GPGIQQLA RV DLDA+ LR +G +L+Y+ RRGTA
Sbjct 63 SIQLLAPLSDSSPIAKFLDRNGPGIQQLAYRVRDLDAVSATLRERGAQLLYDEPRRGTAG 122
Query 130 SRINFIHPKDAGGVLIELVEPA 151
SRINFIHPK AGGVL+ELVEPA
Sbjct 123 SRINFIHPKSAGGVLVELVEPA 144
>gi|343927074|ref|ZP_08766561.1| putative methylmalonyl-CoA epimerase [Gordonia alkanivorans NBRC
16433]
gi|343763029|dbj|GAA13487.1| putative methylmalonyl-CoA epimerase [Gordonia alkanivorans NBRC
16433]
Length=160
Score = 183 bits (464), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 85/139 (62%), Positives = 106/139 (77%), Gaps = 0/139 (0%)
Query 13 LATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGSAAQIQ 72
L + LV +DHVGIAV DLD A EWY HLG +H+E N +QG+ EA++ G A IQ
Sbjct 17 LISDLVVAIDHVGIAVPDLDAAKEWYATHLGFETLHQETNAEQGVEEAMVGPAGGGAVIQ 76
Query 73 LMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTANSRI 132
L+APL+E S IAKF+ + GPG+QQLA RV+D+DA+ RL GVR++Y A+RGTANSRI
Sbjct 77 LLAPLNEESTIAKFIGRNGPGLQQLAVRVTDVDAVMTRLTEAGVRVLYPAAKRGTANSRI 136
Query 133 NFIHPKDAGGVLIELVEPA 151
NF+HPKDAGGVL+ELVEPA
Sbjct 137 NFVHPKDAGGVLLELVEPA 155
>gi|291303441|ref|YP_003514719.1| methylmalonyl-CoA epimerase [Stackebrandtia nassauensis DSM 44728]
gi|290572661|gb|ADD45626.1| methylmalonyl-CoA epimerase [Stackebrandtia nassauensis DSM 44728]
Length=143
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/132 (65%), Positives = 108/132 (82%), Gaps = 0/132 (0%)
Query 20 GLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGSAAQIQLMAPLDE 79
G+DHVG+AVADLD AI +Y D LG VH E ND+QG+REA++A+ G +IQL+AP D
Sbjct 11 GVDHVGVAVADLDAAIRFYEDILGGECVHVEQNDEQGVREAMIAIGGGTTRIQLLAPTDP 70
Query 80 SSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTANSRINFIHPKD 139
+S IAKFLD++GPG+QQLA V+D+DA C LR++ +RL+Y+ RRGTA+SRINFIHPKD
Sbjct 71 ASTIAKFLDRKGPGLQQLAYTVADIDAACASLRAKNIRLLYDEPRRGTADSRINFIHPKD 130
Query 140 AGGVLIELVEPA 151
AGGVL+ELVEPA
Sbjct 131 AGGVLVELVEPA 142
>gi|84494509|ref|ZP_00993628.1| hypothetical protein JNB_06924 [Janibacter sp. HTCC2649]
gi|84384002|gb|EAP99882.1| hypothetical protein JNB_06924 [Janibacter sp. HTCC2649]
Length=154
Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/146 (57%), Positives = 113/146 (78%), Gaps = 3/146 (2%)
Query 9 ARHMLAT---SLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVP 65
+RH+ ++ SL T +DHVG+AV DLD AI +Y D GM L HEE+N++QG+REA++AV
Sbjct 3 SRHLESSPIASLFTAIDHVGVAVTDLDEAIAFYRDTYGMTLAHEEVNEEQGVREAMMAVG 62
Query 66 GSAAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARR 125
S + IQL+APL S IAKF+D+ G G+QQ+A RV D+D + LR +G+RL+Y+ +R
Sbjct 63 DSGSHIQLLAPLSPKSTIAKFIDRSGAGVQQVAYRVEDIDGVSATLRERGLRLLYDEPKR 122
Query 126 GTANSRINFIHPKDAGGVLIELVEPA 151
GT+NSR+NFIHPKDAGG+L+ELVEPA
Sbjct 123 GTSNSRVNFIHPKDAGGILVELVEPA 148
>gi|326385043|ref|ZP_08206715.1| methylmalonyl-CoA epimerase [Gordonia neofelifaecis NRRL B-59395]
gi|326196257|gb|EGD53459.1| methylmalonyl-CoA epimerase [Gordonia neofelifaecis NRRL B-59395]
Length=153
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 82/135 (61%), Positives = 106/135 (79%), Gaps = 0/135 (0%)
Query 17 LVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGSAAQIQLMAP 76
LVT +DHVG+AV DLDVA W+ D+ G + HEE+N++Q +REA++ G IQL+ P
Sbjct 16 LVTAIDHVGLAVPDLDVAAAWWLDNFGFVNQHEEVNEEQRVREAMIGPEGGDTMIQLLTP 75
Query 77 LDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTANSRINFIH 136
L+E S IAKFLD+ GPG+QQ+A RV+DLD + +RL S GVRL+Y +RGTA+SRINF+H
Sbjct 76 LNEESTIAKFLDRNGPGMQQMAVRVTDLDEVAKRLTSAGVRLLYPAPKRGTADSRINFVH 135
Query 137 PKDAGGVLIELVEPA 151
PKDAGGVL+ELVEPA
Sbjct 136 PKDAGGVLLELVEPA 150
>gi|302524854|ref|ZP_07277196.1| methylmalonyl-CoA epimerase [Streptomyces sp. AA4]
gi|302433749|gb|EFL05565.1| methylmalonyl-CoA epimerase [Streptomyces sp. AA4]
Length=154
Score = 181 bits (458), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 84/138 (61%), Positives = 109/138 (79%), Gaps = 3/138 (2%)
Query 17 LVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGSAAQ---IQL 73
VT +DHVGIAV DLD AI ++ DH G+ + HEE+ND+QG+REA+L PG+A IQL
Sbjct 13 FVTAIDHVGIAVPDLDAAIAFHRDHFGLEVAHEEVNDEQGVREAMLRAPGTAGTETMIQL 72
Query 74 MAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTANSRIN 133
+AP + S IAKF+ + GPG+QQLA RVSD+DA LR +G+RL+Y+ A+RGT+NSR+N
Sbjct 73 LAPSRDDSTIAKFIGRNGPGLQQLALRVSDVDAAAAALREKGLRLLYDAAKRGTSNSRVN 132
Query 134 FIHPKDAGGVLIELVEPA 151
F+HPKDAGGVL+ELVEPA
Sbjct 133 FVHPKDAGGVLVELVEPA 150
>gi|262201888|ref|YP_003273096.1| methylmalonyl-CoA epimerase [Gordonia bronchialis DSM 43247]
gi|262085235|gb|ACY21203.1| methylmalonyl-CoA epimerase [Gordonia bronchialis DSM 43247]
Length=157
Score = 180 bits (457), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 82/135 (61%), Positives = 104/135 (78%), Gaps = 0/135 (0%)
Query 17 LVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGSAAQIQLMAP 76
LV +DHVGIAV DLD A +WY HLG +H+E N +QG+ EA++ G IQL+AP
Sbjct 18 LVVAIDHVGIAVPDLDAAKQWYATHLGFETLHQETNTEQGVEEAMVGPAGGGTVIQLLAP 77
Query 77 LDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTANSRINFIH 136
LD SS IAKF+D+ GPG+QQLA RV+D+DA+ RL G+R++Y A+RGTA+SRINF+H
Sbjct 78 LDASSTIAKFIDRNGPGLQQLAVRVTDVDAVTARLTDAGIRVLYPAAKRGTADSRINFVH 137
Query 137 PKDAGGVLIELVEPA 151
PKDAGGVL+ELVEPA
Sbjct 138 PKDAGGVLLELVEPA 152
>gi|119716030|ref|YP_922995.1| methylmalonyl-CoA epimerase [Nocardioides sp. JS614]
gi|119536691|gb|ABL81308.1| methylmalonyl-CoA epimerase [Nocardioides sp. JS614]
Length=170
Score = 180 bits (456), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 83/135 (62%), Positives = 110/135 (82%), Gaps = 0/135 (0%)
Query 17 LVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGSAAQIQLMAP 76
L T +DHVG+AV DLD AI +Y + GM L H+E N++QG+REA++AV S + IQL+AP
Sbjct 31 LFTAIDHVGVAVPDLDAAITFYEEVYGMRLAHQETNEEQGVREAMMAVGDSGSHIQLLAP 90
Query 77 LDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTANSRINFIH 136
LDE+S IAKFLD+ GPGIQQ+A RV+D++A+ LR +G+RL+Y+ RRGT+ SR+NFIH
Sbjct 91 LDENSTIAKFLDRSGPGIQQMAYRVTDVEAVAAILRERGLRLLYDEPRRGTSKSRVNFIH 150
Query 137 PKDAGGVLIELVEPA 151
PKDAGG+L+ELVEPA
Sbjct 151 PKDAGGILVELVEPA 165
>gi|326332952|ref|ZP_08199209.1| methylmalonyl-CoA epimerase [Nocardioidaceae bacterium Broad-1]
gi|325949310|gb|EGD41393.1| methylmalonyl-CoA epimerase [Nocardioidaceae bacterium Broad-1]
Length=149
Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 83/135 (62%), Positives = 109/135 (81%), Gaps = 0/135 (0%)
Query 17 LVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGSAAQIQLMAP 76
L T +DHVG+AVADLD AI++Y GM L H E N++QG+ EA++A+ S ++QL+AP
Sbjct 10 LFTQIDHVGLAVADLDAAIDFYEKTFGMKLAHRETNEEQGVEEAMIAIGDSDNKLQLLAP 69
Query 77 LDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTANSRINFIH 136
L+E+S IAKFLD+ GPG+QQLA RV+D++ + LR +GVRL+Y+ RRGTA+SRINFIH
Sbjct 70 LNENSTIAKFLDRNGPGMQQLAYRVTDVEQVSAILRERGVRLLYDAPRRGTADSRINFIH 129
Query 137 PKDAGGVLIELVEPA 151
PKDAGGVL+ELVEPA
Sbjct 130 PKDAGGVLVELVEPA 144
>gi|256380098|ref|YP_003103758.1| methylmalonyl-CoA epimerase [Actinosynnema mirum DSM 43827]
gi|255924401|gb|ACU39912.1| methylmalonyl-CoA epimerase [Actinosynnema mirum DSM 43827]
Length=146
Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/142 (58%), Positives = 109/142 (77%), Gaps = 3/142 (2%)
Query 13 LATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPG---SAA 69
L + L+T +DHVGIAV DLD AI ++ + G+++ HEE+N++QG+REA+L PG
Sbjct 3 LLSGLITAVDHVGIAVPDLDEAIAFHRETFGLVVAHEEVNEEQGVREAMLRAPGDGGGGT 62
Query 70 QIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTAN 129
+QL+APL S IAKFLD+ GPG+QQLA RVSD+DA RLR G+R++Y +A+RGT
Sbjct 63 AVQLLAPLSPKSTIAKFLDRSGPGLQQLAYRVSDVDAAAERLREAGLRVLYASAKRGTGG 122
Query 130 SRINFIHPKDAGGVLIELVEPA 151
SR+NF+HPKDAGGVL+ELVEPA
Sbjct 123 SRVNFVHPKDAGGVLVELVEPA 144
>gi|330469813|ref|YP_004407556.1| glyoxalase/bleomycin resistance protein/dioxygenase [Verrucosispora
maris AB-18-032]
gi|328812784|gb|AEB46956.1| glyoxalase/bleomycin resistance protein/dioxygenase [Verrucosispora
maris AB-18-032]
Length=160
Score = 177 bits (449), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/135 (65%), Positives = 105/135 (78%), Gaps = 4/135 (2%)
Query 21 LDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGSAAQ---IQLMAPL 77
+DHVGIAVADLD AI++Y GM VH E N +QG+REA+LAV G + +QL+APL
Sbjct 22 IDHVGIAVADLDAAIDFYTRTFGMRCVHTETNTEQGVREAMLAV-GPTTEGGCLQLLAPL 80
Query 78 DESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTANSRINFIHP 137
S IAKFLD+ GPG+QQ+A V+D+DA C LR +G+RL+YET RRGTA SRINFIHP
Sbjct 81 TPESTIAKFLDRNGPGVQQVAYTVTDVDAACAALRERGLRLLYETPRRGTAGSRINFIHP 140
Query 138 KDAGGVLIELVEPAP 152
KDAGGVL+ELVEPAP
Sbjct 141 KDAGGVLVELVEPAP 155
>gi|333920903|ref|YP_004494484.1| putative methylmalonyl-CoA epimerase [Amycolicicoccus subflavus
DQS3-9A1]
gi|333483124|gb|AEF41684.1| Possible methylmalonyl-CoA epimerase [Amycolicicoccus subflavus
DQS3-9A1]
Length=155
Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/144 (57%), Positives = 110/144 (77%), Gaps = 8/144 (5%)
Query 15 TSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGSAAQ---- 70
+ L+T +DHVGIAVADLD AI+WY G+++ H E N+ QG+ EA+L VP ++AQ
Sbjct 7 SELITQIDHVGIAVADLDAAIDWYGASFGLVVSHRETNESQGVEEAML-VPANSAQGAAT 65
Query 71 ---IQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGT 127
+QL++PL + S I +FLD+ GPG+QQLA RV+DLDA R++G+RL+Y+ RRGT
Sbjct 66 STALQLLSPLTDESTIRRFLDRNGPGMQQLAYRVTDLDAAAEHFRAKGIRLLYDEPRRGT 125
Query 128 ANSRINFIHPKDAGGVLIELVEPA 151
A+SRINF+HPKDAGGVL+ELVEPA
Sbjct 126 ADSRINFLHPKDAGGVLVELVEPA 149
>gi|284992494|ref|YP_003411048.1| methylmalonyl-CoA epimerase [Geodermatophilus obscurus DSM 43160]
gi|284065739|gb|ADB76677.1| methylmalonyl-CoA epimerase [Geodermatophilus obscurus DSM 43160]
Length=162
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 113/150 (76%), Gaps = 3/150 (2%)
Query 2 MTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREAL 61
MTTD R L L T +DHVG+AV DLD A+ +Y G+ VHEE+N++QG+REA+
Sbjct 1 MTTD---PRTGLPAELFTTIDHVGVAVPDLDEALAFYAQAFGVHSVHEEVNEEQGVREAM 57
Query 62 LAVPGSAAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYE 121
LAV +IQL+APL S IAKF+ + GPG+QQLA RV+D++A+ LR +G+RL+Y+
Sbjct 58 LAVGDGDTRIQLLAPLTPESTIAKFIGRSGPGLQQLAFRVTDVEAVSATLRERGLRLLYD 117
Query 122 TARRGTANSRINFIHPKDAGGVLIELVEPA 151
T +RGT++SR+NF+HPKDAGGVL+ELVEPA
Sbjct 118 TPKRGTSDSRVNFVHPKDAGGVLVELVEPA 147
>gi|257056832|ref|YP_003134664.1| methylmalonyl-CoA epimerase [Saccharomonospora viridis DSM 43017]
gi|256586704|gb|ACU97837.1| methylmalonyl-CoA epimerase [Saccharomonospora viridis DSM 43017]
Length=153
Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 79/136 (59%), Positives = 109/136 (81%), Gaps = 2/136 (1%)
Query 17 LVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGSA--AQIQLM 74
VT +DHVG+AVADLD AI ++ +H G+ + H E+N++QG+REA+L PG A IQL+
Sbjct 14 FVTAVDHVGVAVADLDAAIAFHTEHFGLEVTHVEVNEEQGVREAMLRAPGDADGTAIQLL 73
Query 75 APLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTANSRINF 134
APL++ S IAKFLD+ GPG+QQLA RV+D++A LR++G+R++Y ARRGTA S++NF
Sbjct 74 APLNDESTIAKFLDRNGPGLQQLAYRVTDVEAAAEALRNKGLRVLYPQARRGTAGSKVNF 133
Query 135 IHPKDAGGVLIELVEP 150
+HPKDAGGVL+ELV+P
Sbjct 134 VHPKDAGGVLVELVQP 149
>gi|159039521|ref|YP_001538774.1| glyoxalase/bleomycin resistance protein/dioxygenase [Salinispora
arenicola CNS-205]
gi|157918356|gb|ABV99783.1| Glyoxalase/bleomycin resistance protein/dioxygenase [Salinispora
arenicola CNS-205]
Length=159
Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 81/133 (61%), Positives = 106/133 (80%), Gaps = 2/133 (1%)
Query 21 LDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGSAAQ--IQLMAPLD 78
+DHVG+AV DLD AI++Y GM VH E N++QG+REA+LAV + A +QL+AP+
Sbjct 22 IDHVGVAVPDLDAAIDFYQRTFGMRCVHTETNEEQGVREAMLAVGPTVAGGCVQLLAPIS 81
Query 79 ESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTANSRINFIHPK 138
+S IA+FLD+ GPG+QQ+A V+D++A C +LR +G+RL+YE RRGTANSRINF+HPK
Sbjct 82 SASTIARFLDRNGPGVQQVAYTVTDIEAACAKLRERGLRLLYEQPRRGTANSRINFVHPK 141
Query 139 DAGGVLIELVEPA 151
DAGGVLIELVEPA
Sbjct 142 DAGGVLIELVEPA 154
>gi|324999733|ref|ZP_08120845.1| glyoxalase family protein [Pseudonocardia sp. P1]
Length=140
Score = 174 bits (440), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 81/134 (61%), Positives = 111/134 (83%), Gaps = 3/134 (2%)
Query 21 LDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGSAA---QIQLMAPL 77
+DHVGIAV DLD AI WY ++LG++ VHEE N +QG+REA+L PG A+ ++QL+APL
Sbjct 3 VDHVGIAVPDLDEAIRWYAENLGLVSVHEETNTEQGVREAMLGAPGEASGATKVQLLAPL 62
Query 78 DESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTANSRINFIHP 137
DE+S IAKF+D+ GPG+QQ+A RV+D+ A LR++G+RL+Y+ RRGT++S++NF+HP
Sbjct 63 DENSTIAKFIDRNGPGLQQVAYRVTDVAAAADALRAKGLRLLYDEPRRGTSDSKVNFVHP 122
Query 138 KDAGGVLIELVEPA 151
KDAGGVL+ELVEPA
Sbjct 123 KDAGGVLVELVEPA 136
>gi|311743998|ref|ZP_07717804.1| methylmalonyl-CoA epimerase [Aeromicrobium marinum DSM 15272]
gi|311313128|gb|EFQ83039.1| methylmalonyl-CoA epimerase [Aeromicrobium marinum DSM 15272]
Length=149
Score = 173 bits (439), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 83/135 (62%), Positives = 105/135 (78%), Gaps = 0/135 (0%)
Query 17 LVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGSAAQIQLMAP 76
L+ +DHVGIAV DLD AIE+Y G+ VHEE+N++QG+REA+LAV S + IQL+AP
Sbjct 10 LLLAIDHVGIAVPDLDEAIEFYGSTFGLHSVHEEVNEEQGVREAMLAVGDSGSFIQLLAP 69
Query 77 LDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTANSRINFIH 136
L S IAKFLD+ G G+QQLA RVSD+DA+ LR +GVRL+Y+ + GT SR+NF+H
Sbjct 70 LSPESTIAKFLDRNGQGVQQLAYRVSDIDAVGATLRERGVRLLYDAPKNGTGGSRVNFVH 129
Query 137 PKDAGGVLIELVEPA 151
PKDAGGVL+ELVEPA
Sbjct 130 PKDAGGVLVELVEPA 144
>gi|256824792|ref|YP_003148752.1| methylmalonyl-CoA epimerase [Kytococcus sedentarius DSM 20547]
gi|256688185|gb|ACV05987.1| methylmalonyl-CoA epimerase [Kytococcus sedentarius DSM 20547]
Length=145
Score = 171 bits (434), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/136 (62%), Positives = 107/136 (79%), Gaps = 2/136 (1%)
Query 16 SLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGSAAQIQLMA 75
+L T +DHVG+AV+DLD AI ++ D LGM L H E N +QG+REA++ + S IQL+A
Sbjct 9 ALFTAIDHVGLAVSDLDAAIAFHRDVLGMELAHTEENPEQGVREAMMRIGDS--HIQLLA 66
Query 76 PLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTANSRINFI 135
PL S IAKFLD RGPG+QQ+A RV+D+DA+ LR +G+RL+Y+ RRGT+NSR+NFI
Sbjct 67 PLTPDSTIAKFLDSRGPGMQQVAYRVADIDAVSTTLRDRGLRLLYDEPRRGTSNSRVNFI 126
Query 136 HPKDAGGVLIELVEPA 151
HPKDAGGVL+ELVEPA
Sbjct 127 HPKDAGGVLVELVEPA 142
>gi|134102675|ref|YP_001108336.1| methylmalonyl-CoA epimerase [Saccharopolyspora erythraea NRRL
2338]
gi|291004639|ref|ZP_06562612.1| methylmalonyl-CoA epimerase [Saccharopolyspora erythraea NRRL
2338]
gi|133915298|emb|CAM05411.1| methylmalonyl-CoA epimerase [Saccharopolyspora erythraea NRRL
2338]
Length=146
Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/140 (58%), Positives = 109/140 (78%), Gaps = 3/140 (2%)
Query 15 TSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGSAA---QI 71
+ LVT +DHVGIAV DLD AIE+ G+ + H E+N++QG+ EA+L PG A+ QI
Sbjct 6 SGLVTAIDHVGIAVPDLDAAIEFQRRTFGLEVAHIEVNEEQGVHEAMLRAPGDASGATQI 65
Query 72 QLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTANSR 131
QL+AP+ + S IAKF+ + GPG+QQLA RV+D++A LR++G RL+Y++ RRGTA+SR
Sbjct 66 QLLAPMRDDSAIAKFIGRSGPGLQQLAYRVTDVEAASEALRAKGFRLLYDSPRRGTADSR 125
Query 132 INFIHPKDAGGVLIELVEPA 151
INF+HPKDAGGVL+ELVEPA
Sbjct 126 INFVHPKDAGGVLVELVEPA 145
>gi|238060751|ref|ZP_04605460.1| glyoxalase/bleomycin resistance protein/dioxygenase [Micromonospora
sp. ATCC 39149]
gi|237882562|gb|EEP71390.1| glyoxalase/bleomycin resistance protein/dioxygenase [Micromonospora
sp. ATCC 39149]
Length=161
Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/132 (63%), Positives = 102/132 (78%), Gaps = 2/132 (1%)
Query 21 LDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGS--AAQIQLMAPLD 78
+DHVGIAVADLD AI++Y GM VH E N +QG+REA+LAV + +QL+APL
Sbjct 29 IDHVGIAVADLDAAIDFYQRTFGMRCVHTETNTEQGVREAMLAVGPTVEGGCVQLLAPLT 88
Query 79 ESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTANSRINFIHPK 138
S IAKFLD+ GPG+QQ+A V D+DA C LR +G+RL+YET RRGTA+SRINF+HPK
Sbjct 89 PESTIAKFLDRNGPGVQQVAYTVVDIDAACAALRERGLRLLYETPRRGTADSRINFVHPK 148
Query 139 DAGGVLIELVEP 150
DAGGVL+ELV+P
Sbjct 149 DAGGVLVELVQP 160
>gi|145596123|ref|YP_001160420.1| glyoxalase/bleomycin resistance protein/dioxygenase [Salinispora
tropica CNB-440]
gi|145305460|gb|ABP56042.1| methylmalonyl-CoA epimerase [Salinispora tropica CNB-440]
Length=157
Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/133 (61%), Positives = 105/133 (79%), Gaps = 2/133 (1%)
Query 21 LDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREALLAVPGSAAQ--IQLMAPLD 78
+DHVGIAV DLD AI++Y GM VH E N++QG+REA+LAV +AA +QL+APL
Sbjct 22 IDHVGIAVPDLDEAIDFYQRAFGMRCVHTETNEEQGVREAMLAVGPTAAGGCVQLLAPLS 81
Query 79 ESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTANSRINFIHPK 138
S IA+FLD++GPG+QQ+A V+D+D C +LR +G+RL+Y RRGTANSR+NF+HPK
Sbjct 82 PESTIARFLDRQGPGMQQVAYTVTDIDVACAKLRERGLRLLYAQPRRGTANSRVNFVHPK 141
Query 139 DAGGVLIELVEPA 151
DAGGVL+ELVEPA
Sbjct 142 DAGGVLVELVEPA 154
Lambda K H
0.322 0.137 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128332939266
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40