BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1324 Length=304 Score E Sequences producing significant alignments: (Bits) Value gi|15608464|ref|NP_215840.1| thioredoxin [Mycobacterium tubercul... 592 2e-167 gi|254364222|ref|ZP_04980268.1| hypothetical thioredoxin [Mycoba... 591 5e-167 gi|289446921|ref|ZP_06436665.1| thioredoxin [Mycobacterium tuber... 590 6e-167 gi|298524831|ref|ZP_07012240.1| conserved hypothetical protein [... 585 2e-165 gi|308231809|ref|ZP_07413839.2| thioredoxin [Mycobacterium tuber... 570 9e-161 gi|240169492|ref|ZP_04748151.1| thioredoxin [Mycobacterium kansa... 473 2e-131 gi|183984045|ref|YP_001852336.1| thioredoxin [Mycobacterium mari... 439 3e-121 gi|118619145|ref|YP_907477.1| thioredoxin [Mycobacterium ulceran... 437 1e-120 gi|254821326|ref|ZP_05226327.1| thioredoxin domain-containing pr... 424 8e-117 gi|342858015|ref|ZP_08714671.1| thioredoxin [Mycobacterium colom... 419 2e-115 gi|41408533|ref|NP_961369.1| hypothetical protein MAP2435c [Myco... 414 7e-114 gi|118464751|ref|YP_880781.1| thioredoxin [Mycobacterium avium 1... 414 1e-113 gi|254774365|ref|ZP_05215881.1| thioredoxin domain-containing pr... 413 1e-113 gi|333989967|ref|YP_004522581.1| thioredoxin [Mycobacterium sp. ... 411 8e-113 gi|15827586|ref|NP_301849.1| hypothetical protein ML1159 [Mycoba... 401 7e-110 gi|118467436|ref|YP_889173.1| hypothetica lprotein [Mycobacteriu... 396 2e-108 gi|296170266|ref|ZP_06851857.1| thioredoxin domain protein [Myco... 385 6e-105 gi|108800826|ref|YP_641023.1| thioredoxin domain-containing prot... 365 6e-99 gi|289761485|ref|ZP_06520863.1| thioredoxin [Mycobacterium tuber... 357 2e-96 gi|120405257|ref|YP_955086.1| thioredoxin domain-containing prot... 341 9e-92 gi|145222930|ref|YP_001133608.1| thioredoxin domain-containing p... 328 5e-88 gi|466907|gb|AAA50882.1| trxA [Mycobacterium leprae] 311 7e-83 gi|169628556|ref|YP_001702205.1| hypothetical protein MAB_1465 [... 280 2e-73 gi|226307379|ref|YP_002767339.1| hypothetical protein RER_38920 ... 273 2e-71 gi|229494039|ref|ZP_04387808.1| thioredoxin [Rhodococcus erythro... 272 4e-71 gi|226360579|ref|YP_002778357.1| thioredoxin [Rhodococcus opacus... 243 2e-62 gi|325673505|ref|ZP_08153196.1| thioredoxin [Rhodococcus equi AT... 239 4e-61 gi|333920899|ref|YP_004494480.1| putative thioredoxin [Amycolici... 236 4e-60 gi|111018457|ref|YP_701429.1| thioredoxin [Rhodococcus jostii RH... 233 2e-59 gi|312139190|ref|YP_004006526.1| thioredoxin [Rhodococcus equi 1... 233 3e-59 gi|343927069|ref|ZP_08766556.1| putative thioredoxin [Gordonia a... 228 9e-58 gi|302524879|ref|ZP_07277221.1| thioredoxin [Streptomyces sp. AA... 227 2e-57 gi|326385040|ref|ZP_08206712.1| Thioredoxin domain-containing pr... 226 4e-57 gi|257056826|ref|YP_003134658.1| thioredoxin [Saccharomonospora ... 219 6e-55 gi|256380072|ref|YP_003103732.1| thioredoxin domain-containing p... 215 9e-54 gi|300783526|ref|YP_003763817.1| thioredoxin [Amycolatopsis medi... 213 2e-53 gi|262201893|ref|YP_003273101.1| thioredoxin domain-containing p... 211 1e-52 gi|54023044|ref|YP_117286.1| putative thioredoxin [Nocardia farc... 208 1e-51 gi|134102655|ref|YP_001108316.1| thioredoxin [Saccharopolyspora ... 201 9e-50 gi|255324532|ref|ZP_05365649.1| thioredoxin domain protein [Cory... 199 4e-49 gi|227503875|ref|ZP_03933924.1| thioredoxin family protein [Cory... 197 2e-48 gi|227832906|ref|YP_002834613.1| hypothetical protein cauri_1080... 197 2e-48 gi|296119537|ref|ZP_06838095.1| thioredoxin-related protein [Cor... 196 5e-48 gi|317508561|ref|ZP_07966223.1| thioredoxin [Segniliparus rugosu... 195 6e-48 gi|296138995|ref|YP_003646238.1| thioredoxin [Tsukamurella pauro... 194 1e-47 gi|237785851|ref|YP_002906556.1| hypothetical protein ckrop_1269... 194 2e-47 gi|311740597|ref|ZP_07714424.1| thioredoxin domain protein [Cory... 190 3e-46 gi|25027878|ref|NP_737932.1| hypothetical protein CE1322 [Coryne... 189 3e-46 gi|296394236|ref|YP_003659120.1| thioredoxin [Segniliparus rotun... 184 1e-44 gi|227501710|ref|ZP_03931759.1| thioredoxin domain protein [Cory... 183 3e-44 >gi|15608464|ref|NP_215840.1| thioredoxin [Mycobacterium tuberculosis H37Rv] gi|15840778|ref|NP_335815.1| thioredoxin-related protein [Mycobacterium tuberculosis CDC1551] gi|31792520|ref|NP_855013.1| thioredoxin [Mycobacterium bovis AF2122/97] 54 more sequence titles Length=304 Score = 592 bits (1526), Expect = 2e-167, Method: Compositional matrix adjust. Identities = 303/304 (99%), Positives = 304/304 (100%), Gaps = 0/304 (0%) Query 1 VTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR 60 +TRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR Sbjct 1 MTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR 60 Query 61 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT 120 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT Sbjct 61 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT 120 Query 121 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL 180 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL Sbjct 121 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL 180 Query 181 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF 240 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF Sbjct 181 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF 240 Query 241 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA 300 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA Sbjct 241 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA 300 Query 301 NALY 304 NALY Sbjct 301 NALY 304 >gi|254364222|ref|ZP_04980268.1| hypothetical thioredoxin [Mycobacterium tuberculosis str. Haarlem] gi|134149736|gb|EBA41781.1| hypothetical thioredoxin [Mycobacterium tuberculosis str. Haarlem] Length=304 Score = 591 bits (1523), Expect = 5e-167, Method: Compositional matrix adjust. Identities = 302/304 (99%), Positives = 304/304 (100%), Gaps = 0/304 (0%) Query 1 VTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR 60 +TRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR Sbjct 1 MTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR 60 Query 61 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT 120 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT Sbjct 61 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT 120 Query 121 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL 180 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL Sbjct 121 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL 180 Query 181 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF 240 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF Sbjct 181 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF 240 Query 241 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA 300 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA Sbjct 241 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA 300 Query 301 NALY 304 NA+Y Sbjct 301 NAVY 304 >gi|289446921|ref|ZP_06436665.1| thioredoxin [Mycobacterium tuberculosis CPHL_A] gi|289419879|gb|EFD17080.1| thioredoxin [Mycobacterium tuberculosis CPHL_A] Length=304 Score = 590 bits (1522), Expect = 6e-167, Method: Compositional matrix adjust. Identities = 302/304 (99%), Positives = 303/304 (99%), Gaps = 0/304 (0%) Query 1 VTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR 60 +TRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR Sbjct 1 MTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR 60 Query 61 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT 120 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT Sbjct 61 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT 120 Query 121 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL 180 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDP VAQARQQL Sbjct 121 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPTVAQARQQL 180 Query 181 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF 240 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF Sbjct 181 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF 240 Query 241 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA 300 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA Sbjct 241 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA 300 Query 301 NALY 304 NALY Sbjct 301 NALY 304 >gi|298524831|ref|ZP_07012240.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298494625|gb|EFI29919.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=304 Score = 585 bits (1509), Expect = 2e-165, Method: Compositional matrix adjust. Identities = 301/304 (99%), Positives = 302/304 (99%), Gaps = 0/304 (0%) Query 1 VTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR 60 +TRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR Sbjct 1 MTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR 60 Query 61 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT 120 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT Sbjct 61 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT 120 Query 121 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL 180 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL Sbjct 121 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL 180 Query 181 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF 240 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF Sbjct 181 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF 240 Query 241 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA 300 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRT LIELFELFDPADPEVVA RRNLA Sbjct 241 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTPLIELFELFDPADPEVVARRRNLA 300 Query 301 NALY 304 NALY Sbjct 301 NALY 304 >gi|308231809|ref|ZP_07413839.2| thioredoxin [Mycobacterium tuberculosis SUMu001] gi|308370002|ref|ZP_07419928.2| thioredoxin [Mycobacterium tuberculosis SUMu002] gi|308370688|ref|ZP_07422375.2| thioredoxin [Mycobacterium tuberculosis SUMu003] 17 more sequence titles Length=293 Score = 570 bits (1469), Expect = 9e-161, Method: Compositional matrix adjust. Identities = 293/293 (100%), Positives = 293/293 (100%), Gaps = 0/293 (0%) Query 12 MAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVRSDEVPVVVLLW 71 MAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVRSDEVPVVVLLW Sbjct 1 MAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVRSDEVPVVVLLW 60 Query 72 SPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVALAAGQPIS 131 SPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVALAAGQPIS Sbjct 61 SPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVALAAGQPIS 120 Query 132 SFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQLEDGDFVAARKS 191 SFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQLEDGDFVAARKS Sbjct 121 SFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQLEDGDFVAARKS 180 Query 192 YQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAFAAADVQVLNQD 251 YQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAFAAADVQVLNQD Sbjct 181 YQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAFAAADVQVLNQD 240 Query 252 VSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLANALY 304 VSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLANALY Sbjct 241 VSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLANALY 293 >gi|240169492|ref|ZP_04748151.1| thioredoxin [Mycobacterium kansasii ATCC 12478] Length=304 Score = 473 bits (1216), Expect = 2e-131, Method: Compositional matrix adjust. Identities = 248/304 (82%), Positives = 270/304 (89%), Gaps = 0/304 (0%) Query 1 VTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR 60 +TRPRPP+GPAMAGAVDLSG+KQRAQQNAA + A R S G EITE NFEDEVI R Sbjct 1 MTRPRPPIGPAMAGAVDLSGLKQRAQQNAATAGAAGRTPSAQPGAVEITETNFEDEVIAR 60 Query 61 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT 120 SDEVPVVVLLWSPRS+VCVDLLDTLSGLAAA +G W LA+VNVDVAPRVAQIFGVQAVPT Sbjct 61 SDEVPVVVLLWSPRSDVCVDLLDTLSGLAAADQGTWQLATVNVDVAPRVAQIFGVQAVPT 120 Query 121 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL 180 VVALAA QPISSFQG QPADQL RW+DSLLSATAGKL+G S E TEVDPAVAQAR +L Sbjct 121 VVALAAAQPISSFQGPQPADQLRRWLDSLLSATAGKLRGPTGSGEFTEVDPAVAQARAEL 180 Query 181 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF 240 E GDF AA+KSYQAILDA PG+VEAKAAIRQI+FL RATAQRPDAV VAD+ DDI+AAF Sbjct 181 EAGDFEAAKKSYQAILDAEPGNVEAKAAIRQIDFLTRATAQRPDAVLVADAAPDDIEAAF 240 Query 241 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA 300 AAADVQ+LNQDV+ AF+RL+ALVR T+G+ERTRVRTRLIELFELFDPADPEV+AGRRNLA Sbjct 241 AAADVQILNQDVTGAFDRLVALVRSTAGDERTRVRTRLIELFELFDPADPEVIAGRRNLA 300 Query 301 NALY 304 NALY Sbjct 301 NALY 304 >gi|183984045|ref|YP_001852336.1| thioredoxin [Mycobacterium marinum M] gi|183177371|gb|ACC42481.1| thioredoxin [Mycobacterium marinum M] Length=304 Score = 439 bits (1128), Expect = 3e-121, Method: Compositional matrix adjust. Identities = 240/304 (79%), Positives = 270/304 (89%), Gaps = 0/304 (0%) Query 1 VTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR 60 +TRPRPP+GPA+AGAVDLSG+KQRAQQ+ AA + +A + GV E+TEANFEDEVI R Sbjct 1 MTRPRPPIGPALAGAVDLSGLKQRAQQDTAAGGASGKAPADQPGVVEVTEANFEDEVIGR 60 Query 61 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT 120 SDEVPVVV+LWSPRS+VCV+L+DTLSGLAAA GKW LA+VNVDV PRVAQIFGVQAVPT Sbjct 61 SDEVPVVVVLWSPRSDVCVELVDTLSGLAAADMGKWRLATVNVDVVPRVAQIFGVQAVPT 120 Query 121 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL 180 VVALAA QPISSFQG QPA+QL WVDSLLSAT GKL G A SE++ EVDP VAQAR +L Sbjct 121 VVALAAAQPISSFQGPQPAEQLRLWVDSLLSATDGKLSGVAGSEDAEEVDPTVAQARAEL 180 Query 181 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF 240 E+GDF AAR SYQA+LDANP SVEAKAAIRQI+FL RATAQRPDAV VAD+ DD+DAAF Sbjct 181 EEGDFDAARGSYQAVLDANPNSVEAKAAIRQIDFLSRATAQRPDAVLVADAAPDDVDAAF 240 Query 241 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA 300 AAADVQVL+QDV+ AFERL+ALVRRTSG+ERTRVRTRLIELFELFDPADPEV+AGRR+LA Sbjct 241 AAADVQVLSQDVTGAFERLVALVRRTSGDERTRVRTRLIELFELFDPADPEVIAGRRSLA 300 Query 301 NALY 304 +ALY Sbjct 301 SALY 304 >gi|118619145|ref|YP_907477.1| thioredoxin [Mycobacterium ulcerans Agy99] gi|118571255|gb|ABL06006.1| thioredoxin [Mycobacterium ulcerans Agy99] Length=304 Score = 437 bits (1124), Expect = 1e-120, Method: Compositional matrix adjust. Identities = 239/304 (79%), Positives = 270/304 (89%), Gaps = 0/304 (0%) Query 1 VTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR 60 +TRPRPP+GPA+AGAVDLSG+KQRAQQ+ AA + +A + GV E+TEANFEDEVI R Sbjct 1 MTRPRPPIGPALAGAVDLSGLKQRAQQDTAAGGASGKAPADQPGVVEVTEANFEDEVIGR 60 Query 61 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT 120 SDEVPVVV+LWSPRS+VCV+L+DTLSGLAAA GKW LA+VNVDV PRVAQIFGVQAVPT Sbjct 61 SDEVPVVVVLWSPRSDVCVELVDTLSGLAAADMGKWRLATVNVDVVPRVAQIFGVQAVPT 120 Query 121 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL 180 VVALAA QPISSFQG QPA+QL WVDSLLSAT GKL G A SE++ EVDP VAQAR +L Sbjct 121 VVALAAAQPISSFQGPQPAEQLRLWVDSLLSATDGKLSGVAGSEDAEEVDPTVAQARAEL 180 Query 181 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF 240 E+G+F AAR SYQA+LDANP SVEAKAAIRQI+FL RATAQRPDAV VAD+ DD+DAAF Sbjct 181 EEGNFDAARGSYQAVLDANPNSVEAKAAIRQIDFLSRATAQRPDAVLVADAAPDDVDAAF 240 Query 241 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA 300 AAADVQVL+QDV+ AFERL+ALVRRTSG+ERTRVRTRLIELFELFDPADPEV+AGRR+LA Sbjct 241 AAADVQVLSQDVTGAFERLVALVRRTSGDERTRVRTRLIELFELFDPADPEVIAGRRSLA 300 Query 301 NALY 304 +ALY Sbjct 301 SALY 304 >gi|254821326|ref|ZP_05226327.1| thioredoxin domain-containing protein [Mycobacterium intracellulare ATCC 13950] Length=304 Score = 424 bits (1090), Expect = 8e-117, Method: Compositional matrix adjust. Identities = 224/304 (74%), Positives = 252/304 (83%), Gaps = 0/304 (0%) Query 1 VTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR 60 +TRPRP +GPA+ GAVDLSG+KQRAQ AA G+T +TEANFE EV++R Sbjct 1 MTRPRPSIGPALTGAVDLSGLKQRAQSPGAAPGGPTSPTPEGGGITAVTEANFEAEVLLR 60 Query 61 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT 120 S+EVPVVVLLWSPRS+ CV LLDTLSGL+ GKWSL SVNVDVAPRVAQIFGV AVPT Sbjct 61 SEEVPVVVLLWSPRSDACVQLLDTLSGLSGQDNGKWSLTSVNVDVAPRVAQIFGVDAVPT 120 Query 121 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL 180 VVALAAGQPISSFQG+QPA+QL W+D +LSATAGKL+GA S E VDP +A ARQQL Sbjct 121 VVALAAGQPISSFQGVQPAEQLRGWLDQILSATAGKLRGATGSAEPDVVDPELAAARQQL 180 Query 181 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF 240 EDGDF AA+ SYQ+ILDANP S EAK AIRQIEFL RATAQRPDAV+VAD+ DI+AA Sbjct 181 EDGDFEAAKASYQSILDANPASAEAKGAIRQIEFLTRATAQRPDAVAVADAAPTDIEAAL 240 Query 241 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA 300 AAADVQ+LNQ+V+AAFERLIALVR TSG++R VRTRL+ELFELFDPADPEVV GRRNLA Sbjct 241 AAADVQILNQEVAAAFERLIALVRSTSGDDRALVRTRLVELFELFDPADPEVVVGRRNLA 300 Query 301 NALY 304 NALY Sbjct 301 NALY 304 >gi|342858015|ref|ZP_08714671.1| thioredoxin [Mycobacterium colombiense CECT 3035] gi|342135348|gb|EGT88514.1| thioredoxin [Mycobacterium colombiense CECT 3035] Length=304 Score = 419 bits (1078), Expect = 2e-115, Method: Compositional matrix adjust. Identities = 221/304 (73%), Positives = 250/304 (83%), Gaps = 0/304 (0%) Query 1 VTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR 60 +TRPRP +GPA+AGAVDLS +KQR Q A A +G+ +TEANFE EV++R Sbjct 1 MTRPRPSIGPALAGAVDLSALKQRPQPAGPPGASAPSAAGGDAGIIAVTEANFEAEVLLR 60 Query 61 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT 120 S+EVPVVVLLWSPRS+ CV LLDT +GLAA GKWSL +VNVDVAPRVAQIFGV AVPT Sbjct 61 SEEVPVVVLLWSPRSDACVQLLDTFAGLAAQDNGKWSLTTVNVDVAPRVAQIFGVDAVPT 120 Query 121 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL 180 VVALAAGQPISSFQG+QPA+QL W+D +LSATAGKLKGA S E+ EVDP +A ARQQL Sbjct 121 VVALAAGQPISSFQGMQPAEQLRGWLDQILSATAGKLKGATGSGEAEEVDPELAAARQQL 180 Query 181 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF 240 EDGDF AA+ SYQ+ILDANP S EAK AIRQI+FL RATAQRPDAV+VAD+ DI AA Sbjct 181 EDGDFEAAKASYQSILDANPASAEAKGAIRQIDFLTRATAQRPDAVAVADAAPGDIQAAL 240 Query 241 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA 300 AAADVQ+LNQDV AF+RLIALVR TSG++RT VRTRL+ELFELFDP DPEV AGRRNLA Sbjct 241 AAADVQILNQDVGPAFDRLIALVRSTSGDDRTLVRTRLVELFELFDPTDPEVAAGRRNLA 300 Query 301 NALY 304 NALY Sbjct 301 NALY 304 >gi|41408533|ref|NP_961369.1| hypothetical protein MAP2435c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396891|gb|AAS04752.1| hypothetical protein MAP_2435c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336460968|gb|EGO39849.1| thioredoxin domain-containing protein [Mycobacterium avium subsp. paratuberculosis S397] Length=303 Score = 414 bits (1065), Expect = 7e-114, Method: Compositional matrix adjust. Identities = 232/304 (77%), Positives = 259/304 (86%), Gaps = 1/304 (0%) Query 1 VTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR 60 +TRPRP +GPA+AGAVDLSG+KQRAQ + + A P G++ +TEANFE EV++R Sbjct 1 MTRPRPSIGPALAGAVDLSGLKQRAQAASGPAGGPAPADGGP-GISAVTEANFEAEVLIR 59 Query 61 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT 120 S+EVPVVVLLWSPRS+ CV LLDTLSGLAA GKWSLA+VNVDVAPRVAQIFGV AVPT Sbjct 60 SEEVPVVVLLWSPRSDACVQLLDTLSGLAAQDNGKWSLATVNVDVAPRVAQIFGVDAVPT 119 Query 121 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL 180 VVALAAGQPISSFQG+QPADQL W+D +LSATAGKLKGA S ES VDP +A ARQQL Sbjct 120 VVALAAGQPISSFQGMQPADQLRGWLDQILSATAGKLKGATGSAESEAVDPELAAARQQL 179 Query 181 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF 240 E GDF AAR SYQAILDANP S EAK AIRQI+FL RATAQRPDAV+VAD+ DIDAAF Sbjct 180 EAGDFEAARTSYQAILDANPASTEAKGAIRQIDFLTRATAQRPDAVAVADAAPGDIDAAF 239 Query 241 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA 300 AAADVQ+LNQDV AAF+RLIALVR TSG++R RVRTRL+ELF+LFDPADPEVVAGRRNLA Sbjct 240 AAADVQILNQDVGAAFDRLIALVRNTSGDDRARVRTRLVELFDLFDPADPEVVAGRRNLA 299 Query 301 NALY 304 NALY Sbjct 300 NALY 303 >gi|118464751|ref|YP_880781.1| thioredoxin [Mycobacterium avium 104] gi|118166038|gb|ABK66935.1| thioredoxin domain protein [Mycobacterium avium 104] Length=303 Score = 414 bits (1063), Expect = 1e-113, Method: Compositional matrix adjust. Identities = 232/304 (77%), Positives = 259/304 (86%), Gaps = 1/304 (0%) Query 1 VTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR 60 +TRPRP +GPA+AGAVDLSG+KQRAQ + + A P G++ +TEANFE EV++R Sbjct 1 MTRPRPSIGPALAGAVDLSGLKQRAQAASGPAGGPAPADGGP-GISAVTEANFEAEVLIR 59 Query 61 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT 120 S+EVPVVVLLWSPRS+ CV LLDTLSGLAA GKWSLA+VNVDVAPRVAQIFGV AVPT Sbjct 60 SEEVPVVVLLWSPRSDACVQLLDTLSGLAAQDNGKWSLATVNVDVAPRVAQIFGVDAVPT 119 Query 121 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL 180 VVALAAGQPISSFQG+QPADQL W+D +LSATAGKLKGA S ES VDP +A ARQQL Sbjct 120 VVALAAGQPISSFQGMQPADQLRGWLDQILSATAGKLKGATGSAESEAVDPELAAARQQL 179 Query 181 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF 240 E GDF AAR SYQAILDANP S EAK AIRQI+FL RATAQRPDAV+VAD+ DIDAAF Sbjct 180 EAGDFEAARTSYQAILDANPASAEAKGAIRQIDFLTRATAQRPDAVAVADAAPGDIDAAF 239 Query 241 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA 300 AAADVQ+LNQDV AAF+RLIALVR TSG++R RVRTRL+ELF+LFDPADPEVVAGRRNLA Sbjct 240 AAADVQILNQDVGAAFDRLIALVRNTSGDDRARVRTRLVELFDLFDPADPEVVAGRRNLA 299 Query 301 NALY 304 NALY Sbjct 300 NALY 303 >gi|254774365|ref|ZP_05215881.1| thioredoxin domain-containing protein [Mycobacterium avium subsp. avium ATCC 25291] Length=303 Score = 413 bits (1062), Expect = 1e-113, Method: Compositional matrix adjust. Identities = 232/304 (77%), Positives = 258/304 (85%), Gaps = 1/304 (0%) Query 1 VTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR 60 +TRPRP +GPA+AGAVDLSG+KQRAQ + + A P G++ +TEANFE EV++R Sbjct 1 MTRPRPSIGPALAGAVDLSGLKQRAQAASGPAGGPAPADGGP-GISAVTEANFEAEVLIR 59 Query 61 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT 120 S+EVPVVVLLWSPRS+ CV LLDTLSGLAA GKWSLA+VNVDVAPRVAQIFGV AVPT Sbjct 60 SEEVPVVVLLWSPRSDACVQLLDTLSGLAAQDNGKWSLATVNVDVAPRVAQIFGVDAVPT 119 Query 121 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL 180 VVALAAGQPISSFQG+QPADQL W+D +LSATAGKLKGA S ES VDP +A ARQQL Sbjct 120 VVALAAGQPISSFQGMQPADQLRGWLDQILSATAGKLKGATGSAESEAVDPELAAARQQL 179 Query 181 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF 240 E GDF AAR SYQAILDANP S EAK AIRQI+FL RATAQRPDAV+VAD+ DIDAAF Sbjct 180 EAGDFEAARTSYQAILDANPASAEAKGAIRQIDFLTRATAQRPDAVAVADAAPGDIDAAF 239 Query 241 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA 300 AAADVQ+LNQDV AAF RLIALVR TSG++R RVRTRL+ELF+LFDPADPEVVAGRRNLA Sbjct 240 AAADVQILNQDVGAAFNRLIALVRNTSGDDRARVRTRLVELFDLFDPADPEVVAGRRNLA 299 Query 301 NALY 304 NALY Sbjct 300 NALY 303 >gi|333989967|ref|YP_004522581.1| thioredoxin [Mycobacterium sp. JDM601] gi|333485935|gb|AEF35327.1| thioredoxin [Mycobacterium sp. JDM601] Length=297 Score = 411 bits (1056), Expect = 8e-113, Method: Compositional matrix adjust. Identities = 218/304 (72%), Positives = 254/304 (84%), Gaps = 7/304 (2%) Query 1 VTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR 60 +TRPRPP+GPA+AGAVDLSG+KQ A D S P G TEITEANFEDEV+VR Sbjct 1 MTRPRPPIGPALAGAVDLSGLKQ---PPGGAGGDG----SAPPGATEITEANFEDEVLVR 53 Query 61 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT 120 S++VPVVVLLWSPRSE C+ L DTL LA + G WSLA+VNVDVAPRVAQ+FGV+AVPT Sbjct 54 SNQVPVVVLLWSPRSEACIKLADTLGALATSDGGTWSLATVNVDVAPRVAQVFGVEAVPT 113 Query 121 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL 180 VVALAAGQPI+SFQG+QP DQL RWVDSLLSATAGKL G +E+ +VDPA+A+AR QL Sbjct 114 VVALAAGQPITSFQGVQPPDQLRRWVDSLLSATAGKLSGGVETEQPEQVDPALARARDQL 173 Query 181 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF 240 + GDF AAR SYQ +L A+P VEAKAA+RQ+ FL RAT ++PDA ++AD+ DDI+AAF Sbjct 174 DAGDFAAARDSYQELLAADPDHVEAKAALRQLTFLERATGRQPDAPALADAAPDDIEAAF 233 Query 241 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA 300 AAADVQ+LNQDV+AAF+RLIALVRRTSG+ER+ VR RL+ELFELFDPADPEVVAGRRNLA Sbjct 234 AAADVQILNQDVTAAFDRLIALVRRTSGDERSTVRARLVELFELFDPADPEVVAGRRNLA 293 Query 301 NALY 304 NALY Sbjct 294 NALY 297 >gi|15827586|ref|NP_301849.1| hypothetical protein ML1159 [Mycobacterium leprae TN] gi|221230063|ref|YP_002503479.1| hypothetical protein MLBr_01159 [Mycobacterium leprae Br4923] gi|13093137|emb|CAC31540.1| conserved hypothetical protein [Mycobacterium leprae] gi|219933170|emb|CAR71254.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=301 Score = 401 bits (1030), Expect = 7e-110, Method: Compositional matrix adjust. Identities = 218/301 (73%), Positives = 248/301 (83%), Gaps = 8/301 (2%) Query 12 MAGAVDLSGIKQRAQQNAAASTDADRAL--------STPSGVTEITEANFEDEVIVRSDE 63 MAGAVDLSG+KQRA+Q A+ S A RA S + V EITEANFEDEV+VRS E Sbjct 1 MAGAVDLSGLKQRARQKASTSDPASRATLGARGTGSSENTSVIEITEANFEDEVLVRSHE 60 Query 64 VPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVA 123 VP++VL+WSPRS+ CV LL+TLSGLA A G W LA+VNVD PRVAQIFGV AVPTVVA Sbjct 61 VPILVLVWSPRSDACVKLLETLSGLAVADSGTWLLATVNVDAVPRVAQIFGVDAVPTVVA 120 Query 124 LAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQLEDG 183 LAAGQP+SSFQG+Q DQL RW+DSLLS TAGKL+G SE+S E+DPA+AQARQQLE G Sbjct 121 LAAGQPLSSFQGMQSVDQLRRWLDSLLSVTAGKLRGPTRSEDSAEIDPAIAQARQQLEAG 180 Query 184 DFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAFAAA 243 DF+ A++SY AILDA+P SVEAKAAIRQI+FL RATAQ PDAV+VAD+ DI AAFAAA Sbjct 181 DFLTAKQSYHAILDADPASVEAKAAIRQIDFLTRATAQHPDAVAVADAAPGDIAAAFAAA 240 Query 244 DVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLANAL 303 DVQ+LNQDV+AAFERLI LVR TSG+ER+ VRTRLIELFELFDP DP V+ GRRNLANAL Sbjct 241 DVQILNQDVTAAFERLIVLVRSTSGDERSSVRTRLIELFELFDPDDPNVIVGRRNLANAL 300 Query 304 Y 304 Y Sbjct 301 Y 301 >gi|118467436|ref|YP_889173.1| hypothetica lprotein [Mycobacterium smegmatis str. MC2 155] gi|118168723|gb|ABK69619.1| tetratricopeptide repeat domain protein [Mycobacterium smegmatis str. MC2 155] Length=296 Score = 396 bits (1018), Expect = 2e-108, Method: Compositional matrix adjust. Identities = 206/304 (68%), Positives = 248/304 (82%), Gaps = 8/304 (2%) Query 1 VTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR 60 +TRPRP +GPA+AGAVDLS +K+ AAS +A A P+ VTE+TEANFE EV+VR Sbjct 1 MTRPRPSIGPALAGAVDLSALKR-----PAASGEAAPAPGGPN-VTEVTEANFEAEVLVR 54 Query 61 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT 120 S +VPVVV+LWSPRS+ L +T + LA+A GKWSLA+VNVD PR+AQ+FG+QAVPT Sbjct 55 SGQVPVVVVLWSPRSDASAQLTETFADLASADGGKWSLAAVNVDTTPRIAQMFGIQAVPT 114 Query 121 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL 180 VVALA GQPI+SFQG QP +QL RWVDSLL ATAGKL G S EE+ +VDPA+AQAR L Sbjct 115 VVALAGGQPIASFQGPQPPEQLRRWVDSLLEATAGKLSG--SGEEAEQVDPALAQARAHL 172 Query 181 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF 240 + G+F A K+Y+AIL+A P EAK A+RQI FL RATAQRPDAV VAD+ DDI+AAF Sbjct 173 DQGNFDEALKAYEAILEAQPNHPEAKGAVRQIGFLQRATAQRPDAVEVADAAPDDIEAAF 232 Query 241 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA 300 AAADV++L Q VSAAF+RLIAL++RT+G++RT+VRTRLIELFELFDPADPEV+AGRRNLA Sbjct 233 AAADVEILAQQVSAAFDRLIALIKRTAGDDRTKVRTRLIELFELFDPADPEVIAGRRNLA 292 Query 301 NALY 304 NALY Sbjct 293 NALY 296 >gi|296170266|ref|ZP_06851857.1| thioredoxin domain protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894989|gb|EFG74708.1| thioredoxin domain protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=287 Score = 385 bits (988), Expect = 6e-105, Method: Compositional matrix adjust. Identities = 215/287 (75%), Positives = 241/287 (84%), Gaps = 0/287 (0%) Query 18 LSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVRSDEVPVVVLLWSPRSEV 77 +SG+KQRAQQ A T + GV+ ITEANFE EV++RS+EVPVVVLLWSPRS+ Sbjct 1 MSGLKQRAQQQPAGGTGGGATPAADGGVSAITEANFESEVLLRSEEVPVVVLLWSPRSDA 60 Query 78 CVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVALAAGQPISSFQGLQ 137 CV L+D LSGLAA GKWSLA+VNVDVAPRVAQIFGV AVPTVVALAAGQPISSFQG+Q Sbjct 61 CVQLVDILSGLAAEDNGKWSLATVNVDVAPRVAQIFGVDAVPTVVALAAGQPISSFQGMQ 120 Query 138 PADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQLEDGDFVAARKSYQAILD 197 P +QL W+DSLLSATAGKL+G +S E EVDP +A AR+QLE G+F AAR +YQAILD Sbjct 121 PPEQLRGWIDSLLSATAGKLRGPNNSGEPAEVDPELAAAREQLEAGNFDAARAAYQAILD 180 Query 198 ANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAFAAADVQVLNQDVSAAFE 257 +PGS EAK AIRQI+FL RATA PDA++ AD+ DDIDAAFAAADVQ+LNQDV AAFE Sbjct 181 GDPGSAEAKGAIRQIDFLTRATAHSPDALAAADAAPDDIDAAFAAADVQILNQDVGAAFE 240 Query 258 RLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLANALY 304 RLIALVR TSG+ERTRVRTRLIELFELFDPADPEVVAGRRNLANALY Sbjct 241 RLIALVRSTSGDERTRVRTRLIELFELFDPADPEVVAGRRNLANALY 287 >gi|108800826|ref|YP_641023.1| thioredoxin domain-containing protein [Mycobacterium sp. MCS] gi|119869966|ref|YP_939918.1| thioredoxin domain-containing protein [Mycobacterium sp. KMS] gi|126436424|ref|YP_001072115.1| thioredoxin domain-containing protein [Mycobacterium sp. JLS] gi|108771245|gb|ABG09967.1| Thioredoxin domain protein [Mycobacterium sp. MCS] gi|119696055|gb|ABL93128.1| Thioredoxin domain [Mycobacterium sp. KMS] gi|126236224|gb|ABN99624.1| Thioredoxin domain [Mycobacterium sp. JLS] Length=299 Score = 365 bits (936), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 209/304 (69%), Positives = 239/304 (79%), Gaps = 5/304 (1%) Query 1 VTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR 60 +TRPRP +GPA+AGAVDLS +KQR AA A EITEAN E EV++R Sbjct 1 MTRPRPSIGPALAGAVDLSALKQRPAAEAAGPAGAGGPGGV-----EITEANLEAEVLIR 55 Query 61 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT 120 S +VPVVVLLWSPRS+ V L TL+ LA A GKWSLA+VNVD PRVAQ+FGVQAVPT Sbjct 56 SSQVPVVVLLWSPRSDSSVALGQTLAELANADAGKWSLATVNVDTTPRVAQMFGVQAVPT 115 Query 121 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL 180 VVALA GQPISSFQG QPADQL RW+DSLL ATAGKL G+ ++ +VDP VAQAR L Sbjct 116 VVALAGGQPISSFQGPQPADQLRRWIDSLLEATAGKLAGSGDPDQPEQVDPEVAQARAFL 175 Query 181 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF 240 ++GDF AA +YQAILDA P EAK A+RQI FL RAT QRPDAV+VAD+ DD+DAAF Sbjct 176 DNGDFDAALSAYQAILDAQPNHAEAKGAVRQIVFLQRATTQRPDAVTVADAAPDDVDAAF 235 Query 241 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA 300 AAADV++L Q V AAFERLIALV+RT+G++RTRVRTRLIELFELFDPADPEV+AGRR LA Sbjct 236 AAADVEILQQQVEAAFERLIALVKRTAGDDRTRVRTRLIELFELFDPADPEVIAGRRKLA 295 Query 301 NALY 304 NALY Sbjct 296 NALY 299 >gi|289761485|ref|ZP_06520863.1| thioredoxin [Mycobacterium tuberculosis GM 1503] gi|289708991|gb|EFD73007.1| thioredoxin [Mycobacterium tuberculosis GM 1503] Length=231 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 181/186 (98%), Positives = 183/186 (99%), Gaps = 0/186 (0%) Query 1 VTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR 60 +TRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR Sbjct 1 MTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR 60 Query 61 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT 120 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT Sbjct 61 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT 120 Query 121 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL 180 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL Sbjct 121 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL 180 Query 181 EDGDFV 186 ED + Sbjct 181 EDATLL 186 >gi|120405257|ref|YP_955086.1| thioredoxin domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119958075|gb|ABM15080.1| Thioredoxin domain [Mycobacterium vanbaalenii PYR-1] Length=297 Score = 341 bits (874), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 196/304 (65%), Positives = 234/304 (77%), Gaps = 7/304 (2%) Query 1 VTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVR 60 +TRP P + PA+AGAVDLS +KQRA A + E+TEAN E EV+VR Sbjct 1 MTRPGPRISPALAGAVDLSALKQRASAGGGAPAGNPGGV-------EVTEANLEAEVLVR 53 Query 61 SDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPT 120 S EVPVVVLLWSPRS+ V L D L+ L+AA KW+ A+VNVD PRVAQ+FGVQAVPT Sbjct 54 STEVPVVVLLWSPRSDSSVQLGDALAALSAADGAKWTFATVNVDTTPRVAQMFGVQAVPT 113 Query 121 VVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQL 180 VVALAAG+P+SSF+G+QP +QL RW+DSLL+A AGKL G E++ VDP V QAR L Sbjct 114 VVALAAGRPLSSFEGIQPPEQLRRWIDSLLNAVAGKLGGTGEDEQAEAVDPEVEQARAHL 173 Query 181 EDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAF 240 + GDF AA+ +YQAILDANP EAK A+RQI FL RATA DA++VAD+ +DIDAAF Sbjct 174 DAGDFEAAQSAYQAILDANPNHDEAKGAVRQIGFLQRATAHPRDAIAVADASPNDIDAAF 233 Query 241 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA 300 AAADV++L QDV AAF RL ALV+RT+G++RT+VRTRLIELF+LFDPADPEVVAGRRNLA Sbjct 234 AAADVEILQQDVQAAFTRLTALVKRTAGDDRTKVRTRLIELFDLFDPADPEVVAGRRNLA 293 Query 301 NALY 304 NALY Sbjct 294 NALY 297 >gi|145222930|ref|YP_001133608.1| thioredoxin domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|315443393|ref|YP_004076272.1| thioredoxin domain-containing protein [Mycobacterium sp. Spyr1] gi|145215416|gb|ABP44820.1| Thioredoxin domain [Mycobacterium gilvum PYR-GCK] gi|315261696|gb|ADT98437.1| thioredoxin domain-containing protein [Mycobacterium sp. Spyr1] Length=298 Score = 328 bits (842), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 191/305 (63%), Positives = 230/305 (76%), Gaps = 8/305 (2%) Query 1 VTRPRPPLGPAMAGAVDLSGIKQRAQQNA-AASTDADRALSTPSGVTEITEANFEDEVIV 59 +TRP P + A+AGAVDLS +KQR +A +AST A P G+ E+TE N E +V+V Sbjct 1 MTRPGPRISSALAGAVDLSALKQRPASSAESASTGA------PGGI-EVTETNLEADVLV 53 Query 60 RSDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVP 119 RS EVPVVVLLWSPRS+ V L + L L+A KW A+VNVD PRVAQ+FGVQAVP Sbjct 54 RSTEVPVVVLLWSPRSDASVQLGEALGALSATDGAKWVFATVNVDTTPRVAQMFGVQAVP 113 Query 120 TVVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQ 179 TVVALAAG+P+SSF+G+QP DQL RW+DSLL+A AGKL GA + EVDP + QAR Sbjct 114 TVVALAAGRPLSSFEGMQPPDQLRRWIDSLLNAVAGKLSGAGDEGQPEEVDPQLEQARAL 173 Query 180 LEDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAA 239 L++GDF AAR +YQAILDA+P EAK A+RQI FL RAT DAV++AD+ DDI AA Sbjct 174 LDEGDFDAARNAYQAILDADPNHAEAKGAVRQIGFLQRATTHPQDAVAIADAAPDDIAAA 233 Query 240 FAAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNL 299 AAADV++L Q + AF RL ALVRRT+G++RT VRTRLIELF+LFDPADP V+AGRRNL Sbjct 234 LAAADVEILQQQIEPAFARLTALVRRTAGDDRTTVRTRLIELFDLFDPADPAVIAGRRNL 293 Query 300 ANALY 304 ANALY Sbjct 294 ANALY 298 >gi|466907|gb|AAA50882.1| trxA [Mycobacterium leprae] Length=255 Score = 311 bits (798), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 159/228 (70%), Positives = 183/228 (81%), Gaps = 8/228 (3%) Query 1 VTRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTDADRAL--------STPSGVTEITEAN 52 VT PR P+ PAMAGAVDLSG+KQRA+Q A+ S A RA S + V EITEAN Sbjct 14 VTSPRSPIRPAMAGAVDLSGLKQRARQKASTSDPASRATLGARGTGSSENTSVIEITEAN 73 Query 53 FEDEVIVRSDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQI 112 FEDEV+VRS EVP++VL+WSPRS+ CV LL+TLSGLA A G W LA+VNVD PRVAQI Sbjct 74 FEDEVLVRSHEVPILVLVWSPRSDACVKLLETLSGLAVADSGTWLLATVNVDAVPRVAQI 133 Query 113 FGVQAVPTVVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPA 172 FGV AVPTVVALAAGQP+SSFQG+Q DQL RW+DSLLS TAGKL+G SE+S E+DPA Sbjct 134 FGVDAVPTVVALAAGQPLSSFQGMQSVDQLRRWLDSLLSVTAGKLRGPTRSEDSAEIDPA 193 Query 173 VAQARQQLEDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATA 220 +AQARQQLE GDF+ A++SY AILDA+P SVEAKAAIRQI+FL RATA Sbjct 194 IAQARQQLEAGDFLTAKQSYHAILDADPASVEAKAAIRQIDFLTRATA 241 >gi|169628556|ref|YP_001702205.1| hypothetical protein MAB_1465 [Mycobacterium abscessus ATCC 19977] gi|169240523|emb|CAM61551.1| Conserved hypothetical protein thioredoxin-like [Mycobacterium abscessus] Length=307 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 180/312 (58%), Positives = 224/312 (72%), Gaps = 13/312 (4%) Query 1 VTRPRPPLGPA--MAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVI 58 +TRPRP + A M+GAVDLS +KQRAQ+ A+ A + E+TEAN E EV+ Sbjct 1 MTRPRPAVAAAAAMSGAVDLSALKQRAQEPASGEPSAGGEWTV-----EVTEANLESEVL 55 Query 59 VRSDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAV 118 +S+ VPV+VLL SPRSE L TL L A +G W+LA VNVD P++AQ+FGVQAV Sbjct 56 AQSNRVPVIVLLGSPRSEASAALAATLGDLVAEDRGTWALARVNVDTNPQIAQVFGVQAV 115 Query 119 PTVVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGA-ASSEESTE--VDPAVAQ 175 PTVVA+AAG+P++SF G QPADQL RW+DS+L A AGKL A S +E TE VDPA+A Sbjct 116 PTVVAVAAGRPLTSFTGPQPADQLRRWLDSILDAVAGKLPDAPVSDDEDTEEAVDPALAA 175 Query 176 ARQQLEDGDFVAARKSYQAILDAN-PGSV--EAKAAIRQIEFLIRATAQRPDAVSVADSL 232 AR L+ GDF AAR +YQ +LD G+V EA A++RQI FLIRAT Q DAV A++ Sbjct 176 ARDALDSGDFEAARTAYQGLLDGGATGAVAAEATASVRQIAFLIRATGQPQDAVLTANAA 235 Query 233 SDDIDAAFAAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEV 292 DIDA AAADV+VL+Q +AF+RL+ALVR TS ++R +VR RL+ELFELFDPADP V Sbjct 236 PGDIDAGLAAADVEVLSQQPDSAFDRLVALVRGTSDDDRAKVRARLLELFELFDPADPAV 295 Query 293 VAGRRNLANALY 304 +AGRR LANAL+ Sbjct 296 IAGRRKLANALF 307 >gi|226307379|ref|YP_002767339.1| hypothetical protein RER_38920 [Rhodococcus erythropolis PR4] gi|226186496|dbj|BAH34600.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=316 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 157/316 (50%), Positives = 212/316 (68%), Gaps = 12/316 (3%) Query 1 VTRP--RPP-----LGPAMAGAVDLSGIKQRAQQNAAA-STDADRALSTPSG-VTEITEA 51 +TRP RPP + AM+GAVDLS K+RA +T D A+S SG V E+TE Sbjct 1 MTRPGSRPPARSSAVAAAMSGAVDLSAFKERATAPPPPRNTSGDGAVSAVSGAVIEVTEE 60 Query 52 NFEDEVIVRSDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQ 111 NFE EV+++S +VPV+V + E V + L LAA A GKW LA+V+VDV+PR+AQ Sbjct 61 NFESEVLLKSSQVPVIVNIGGRAYEPSVVFTEVLESLAARAGGKWILANVDVDVSPRIAQ 120 Query 112 IFGVQAVPTVVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASS--EESTEV 169 FGVQ+VPTVVA+AAGQP++ FQG QP QLS+W D++L A GKL G S E EV Sbjct 121 AFGVQSVPTVVAVAAGQPLADFQGAQPEAQLSQWFDAVLQAVEGKLSGPVSDGDEPVEEV 180 Query 170 -DPAVAQARQQLEDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSV 228 DP A L++GD AA +YQ ILDA P + EAK+A+RQ++F+ R P++++ Sbjct 181 EDPRFVAAETALDEGDLDAAIAAYQMILDAEPNNAEAKSAVRQVKFMARVQGVDPESIAA 240 Query 229 ADSLSDDIDAAFAAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPA 288 AD+ +++ FAAAD+++ Q AAF RLI++V RT+G+++ RTRL+ELFELFDPA Sbjct 241 ADADPSNLELQFAAADLEMFAQQPEAAFARLISVVSRTAGDDKAAARTRLLELFELFDPA 300 Query 289 DPEVVAGRRNLANALY 304 +P V+A RR LA+ALY Sbjct 301 EPIVIAARRKLASALY 316 >gi|229494039|ref|ZP_04387808.1| thioredoxin [Rhodococcus erythropolis SK121] gi|229319108|gb|EEN84960.1| thioredoxin [Rhodococcus erythropolis SK121] Length=316 Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 156/316 (50%), Positives = 211/316 (67%), Gaps = 12/316 (3%) Query 1 VTRP--RPP-----LGPAMAGAVDLSGIKQRAQQNAAA-STDADRALSTPSG-VTEITEA 51 +TRP RPP + AM+GAVDLS K+RA +T D A+S SG V E+TE Sbjct 1 MTRPGSRPPARSSAVAAAMSGAVDLSAFKERATAPPPPRNTSGDGAVSAVSGAVIEVTEE 60 Query 52 NFEDEVIVRSDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQ 111 NFE EV+++S +VPV+V + E V + L AA A GKW LA+V+VDV+PR+AQ Sbjct 61 NFESEVLLKSSQVPVIVNIGGRAYEPSVVFTEVLESFAARAGGKWILANVDVDVSPRIAQ 120 Query 112 IFGVQAVPTVVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASS--EESTEV 169 FGVQ+VPTVVA+AAGQP++ FQG QP QLS+W D++L A GKL G S E EV Sbjct 121 AFGVQSVPTVVAVAAGQPLADFQGAQPEAQLSQWFDAVLQAVEGKLSGPVSDADEPVEEV 180 Query 170 -DPAVAQARQQLEDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSV 228 DP A L++GD AA +YQ ILDA P + EAK+A+RQ++F+ R P++++ Sbjct 181 EDPRFVAAETALDEGDLDAAIAAYQEILDAEPNNAEAKSAVRQVKFMARVQGVDPESIAA 240 Query 229 ADSLSDDIDAAFAAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPA 288 AD+ D++ FAAAD+++ Q A+F RLI++V RT+G+++ RTRL+ELFELFDPA Sbjct 241 ADADPSDLELQFAAADLEMFAQQPEASFARLISVVSRTAGDDKAAARTRLLELFELFDPA 300 Query 289 DPEVVAGRRNLANALY 304 +P V+A RR LA+ALY Sbjct 301 EPIVIAARRKLASALY 316 >gi|226360579|ref|YP_002778357.1| thioredoxin [Rhodococcus opacus B4] gi|226239064|dbj|BAH49412.1| putative thioredoxin [Rhodococcus opacus B4] Length=305 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 151/305 (50%), Positives = 193/305 (64%), Gaps = 12/305 (3%) Query 12 MAGAVDLSGIKQRAQQNAAASTDADR---ALSTPSG-----VTEITEANFEDEVIVRSDE 63 M+GAVDLS +K+RA + A + P G V ++TEA FE EV+ RS + Sbjct 1 MSGAVDLSALKERAAAPPPPAPAPSGDGAAPAAPGGTGLTPVIDVTEATFEAEVLARSQQ 60 Query 64 VPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVA 123 VPVVV LW+ E C L L LA A G W LA V+VD PR+AQ FGVQ+VPTVVA Sbjct 61 VPVVVDLWATWCEPCKQLSPLLEKLAHEAGGTWVLAKVDVDANPRIAQAFGVQSVPTVVA 120 Query 124 LAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGA----ASSEESTEVDPAVAQARQQ 179 +A GQP++ FQG QP QL +W+ ++ ATAGKL G S++E DP A Sbjct 121 IAGGQPLADFQGAQPEPQLRQWLAAVQQATAGKLSGPPAGDGSADEPEPEDPRFVAAEAA 180 Query 180 LEDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAA 239 L++GD AA +Q ILDA P + EA+ AIRQ+ FL R + P AV+ AD+ DIDA Sbjct 181 LDEGDLAAAEAEFQKILDAEPANAEAQGAIRQVRFLARVQSVDPGAVAAADAAPADIDAQ 240 Query 240 FAAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNL 299 AADV++ +Q AAF RLI +V R++G++RTRVRTRL+ELFELFDPA+P V+ RR L Sbjct 241 LQAADVELYSQAPDAAFARLIGVVARSAGDDRTRVRTRLLELFELFDPAEPVVMTARRKL 300 Query 300 ANALY 304 A ALY Sbjct 301 AAALY 305 >gi|325673505|ref|ZP_08153196.1| thioredoxin [Rhodococcus equi ATCC 33707] gi|325555526|gb|EGD25197.1| thioredoxin [Rhodococcus equi ATCC 33707] Length=302 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 149/302 (50%), Positives = 195/302 (65%), Gaps = 9/302 (2%) Query 12 MAGAVDLSGIKQRAQQNAAASTDA---DRALSTPSG---VTEITEANFEDEVIVRSDEVP 65 MAGAVDLSG+K RA + S A P+G V ++TEA F+ EV+ RS+EV Sbjct 1 MAGAVDLSGLKDRAPAPPSPSAGPPADGSAPVNPTGLAPVVDVTEATFQTEVLDRSNEVL 60 Query 66 VVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVALA 125 V+V LW+ C L L LA G W LA ++VD P +AQ FGVQ+VPTVVA+A Sbjct 61 VIVDLWATWCGPCKQLSPVLEKLAHEGGGNWVLAKIDVDANPGIAQAFGVQSVPTVVAIA 120 Query 126 AGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQ---ARQQLED 182 AG+P++ F G QP QL +W+ +L A AGKL G S + E +P + A L++ Sbjct 121 AGRPLADFAGAQPEPQLRQWIAALQEAVAGKLSGPPSGDGEPEPEPEDPRFVAAENALDE 180 Query 183 GDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAFAA 242 GDF A +Y IL++ P + +A+AA+RQ+ FL R DAV+VAD+ D IDA FAA Sbjct 181 GDFAGAEAAYNLILNSEPANQQAQAALRQVRFLARVQDLPADAVAVADAQPDSIDAQFAA 240 Query 243 ADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLANA 302 AD ++ +Q AAF+RL+ALVRRT G++RT VRTRL+ELFELFDPA+P VVA RR LA+A Sbjct 241 ADAELYSQQPEAAFDRLVALVRRTFGDDRTTVRTRLLELFELFDPAEPIVVAARRKLASA 300 Query 303 LY 304 LY Sbjct 301 LY 302 >gi|333920899|ref|YP_004494480.1| putative thioredoxin [Amycolicicoccus subflavus DQS3-9A1] gi|333483120|gb|AEF41680.1| Putative thioredoxin [Amycolicicoccus subflavus DQS3-9A1] Length=321 Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 137/293 (47%), Positives = 182/293 (63%), Gaps = 15/293 (5%) Query 11 AMAGAVDLSGIKQRA-------QQNAAASTDADRALSTPSGVTEITEANFEDEVIVRSDE 63 ++AGAVDL+ +K+RA QQN+A D PS +T++TE FE EVI RS+ Sbjct 21 SLAGAVDLAALKERAAQKASPTQQNSARPAPGD----GPSLITDVTEQTFESEVIERSNR 76 Query 64 VPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVA 123 V VVV LW+ +E C +L L LA+ A GKW LA ++VD PR+AQ FGVQ+VPTVVA Sbjct 77 VLVVVDLWATWAEPCKELSPILEQLASEANGKWVLARIDVDANPRIAQAFGVQSVPTVVA 136 Query 124 LAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEV----DPAVAQARQQ 179 +A GQP+ +F G+Q Q+ +W+ LL A GKL G A + DP + A Sbjct 137 IAGGQPVHAFAGMQSEPQIRQWLGELLKAVEGKLPGEARQDADAVAEPPRDPRIEAAEDA 196 Query 180 LEDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAA 239 L++GDF AA +Y IL+ P + EAKA FL R P+A +AD+ DDIDA Sbjct 197 LQNGDFAAAEAAYAQILNDEPRNTEAKAGANHARFLARVQNLSPEAAKIADTNPDDIDAQ 256 Query 240 FAAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEV 292 AAD +V+N++ AAF RLI L+R T+G++R+RVR RLI L +LFDPADP V Sbjct 257 LDAADFEVVNREPEAAFGRLIGLIRSTAGDDRSRVRERLISLLDLFDPADPLV 309 >gi|111018457|ref|YP_701429.1| thioredoxin [Rhodococcus jostii RHA1] gi|110817987|gb|ABG93271.1| thioredoxin [Rhodococcus jostii RHA1] Length=325 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 146/301 (49%), Positives = 189/301 (63%), Gaps = 12/301 (3%) Query 16 VDLSGIKQRAQQNAAASTDADRALSTPSG--------VTEITEANFEDEVIVRSDEVPVV 67 VDLS +K+RA + + P+ V ++TEA FE EV+VRS +VPVV Sbjct 25 VDLSALKERAAAPPPPVSAPSGDGAAPAAPGSTGLAPVIDVTEATFEAEVLVRSQQVPVV 84 Query 68 VLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVALAAG 127 V LW+ E C L L LA A G W LA V+VD PR+AQ FGVQ+VPTVVA+A G Sbjct 85 VDLWATWCEPCKQLSPLLEKLAREAGGTWVLAKVDVDANPRIAQAFGVQSVPTVVAIAGG 144 Query 128 QPISSFQGLQPADQLSRWVDSLLSATAGKLKGA----ASSEESTEVDPAVAQARQQLEDG 183 QP++ FQG QP QL +W+ ++ ATAGKL G +++E DP A L++G Sbjct 145 QPLADFQGAQPEPQLRQWLAAVQQATAGKLSGPPAADGNADEPEPEDPRFVAAEAALDEG 204 Query 184 DFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAFAAA 243 D AA +Q ILD P + EA+ AIRQ+ FL R + P AV+ AD+ DDIDA AA Sbjct 205 DLSAAEAEFQKILDEEPANAEAQGAIRQVRFLARVQSVDPGAVAAADAAPDDIDAQLQAA 264 Query 244 DVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLANAL 303 DV+V +Q AAF RLI +V R++G+++TRVRTRL+ELFELFDPA+P V+ RR LA AL Sbjct 265 DVEVYSQAPDAAFARLIGVVARSAGDDKTRVRTRLLELFELFDPAEPVVMTARRKLAAAL 324 Query 304 Y 304 Y Sbjct 325 Y 325 >gi|312139190|ref|YP_004006526.1| thioredoxin [Rhodococcus equi 103S] gi|311888529|emb|CBH47841.1| putative secreted thioredoxin [Rhodococcus equi 103S] Length=317 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 152/312 (49%), Positives = 203/312 (66%), Gaps = 9/312 (2%) Query 2 TRPRPPLGPAMAGAVDLSGIKQRAQQNAAASTD--AD-RALSTPSG---VTEITEANFED 55 +RP P + AMAGAVDLSG+K RA + S AD A P+G V ++TEA F+ Sbjct 6 SRPSPAIAAAMAGAVDLSGLKDRAPAPPSPSVGPPADGSAPVNPTGLAPVVDVTEATFQT 65 Query 56 EVIVRSDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGV 115 EV+ RS++V V+V LW+ C L L LA G W LA ++VD P +AQ FGV Sbjct 66 EVLDRSNQVLVIVDLWATWCGPCKQLSPVLEKLAHEGGGNWVLAKIDVDANPGIAQAFGV 125 Query 116 QAVPTVVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQ 175 Q+VPTVVA+AAG+P++ F G QP QL +W+ +L A AGKL G S++ E +P + Sbjct 126 QSVPTVVAIAAGRPLADFAGAQPEPQLRQWIAALQEAVAGKLSGPPSADGEPEPEPEDPR 185 Query 176 ---ARQQLEDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSL 232 A L++GDF A +Y IL++ P + +A+AA+RQ+ FL R DAV+VAD+ Sbjct 186 FVAAENALDEGDFAGAEAAYNLILNSEPANQQAQAALRQVRFLARVQDLPADAVAVADAQ 245 Query 233 SDDIDAAFAAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEV 292 D IDA FAAAD ++ +Q AAF+RL+ALV+RT G++RT VRTRL+ELFELFD A+P V Sbjct 246 PDSIDAQFAAADAELYSQQPEAAFDRLVALVKRTFGDDRTTVRTRLLELFELFDSAEPIV 305 Query 293 VAGRRNLANALY 304 VA RR LA+ALY Sbjct 306 VAARRKLASALY 317 >gi|343927069|ref|ZP_08766556.1| putative thioredoxin [Gordonia alkanivorans NBRC 16433] gi|343763024|dbj|GAA13482.1| putative thioredoxin [Gordonia alkanivorans NBRC 16433] Length=314 Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 137/315 (44%), Positives = 188/315 (60%), Gaps = 23/315 (7%) Query 11 AMAGAVDLSGIKQRAQQNAAASTDADR-------------------ALSTPSGVTEITEA 51 AM GAVDL GIK+RA+ A S A R + + V ++TE Sbjct 2 AMTGAVDLGGIKERAEAQRAQSQRAQRPQAQRDDTAGPGTPPPSAPPAAAGASVIDVTEE 61 Query 52 NFEDEVIVRSDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQ 111 FE EV+ RS + VVV LW+ C L L LAA + G+W LA V+VD PR++Q Sbjct 62 TFEAEVLNRSMQQLVVVDLWAEWCGPCKQLSPVLERLAAESGGRWVLAKVDVDANPRISQ 121 Query 112 IFGVQAVPTVVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEEST--EV 169 F VQ++P VVA+ GQP+++F G++ +++ W+D + + L AA+ + Sbjct 122 AFRVQSIPMVVAIVQGQPVTAFNGVRSEAEITAWIDEIFAQVGNALPDAAAGAAPEPEQT 181 Query 170 DPAVAQARQQLEDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVA 229 DP + A ++L DGDF A +Y+A+ +A P +VEA +A R +EF++RA A P V A Sbjct 182 DPRMLAAEEKLNDGDFDGALAAYRAVAEAEPDNVEAASAARNLEFILRAQAHDPSIVETA 241 Query 230 DSLSDDIDAAFAAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPAD 289 DIDA AAADV +L+Q AAF+R+I +VR T GEERTR RTRL+ELFELFDPA+ Sbjct 242 SP--RDIDAQLAAADVLLLSQQPEAAFDRIIDVVRVTHGEERTRARTRLLELFELFDPAE 299 Query 290 PEVVAGRRNLANALY 304 P VV+ RR LA+ALY Sbjct 300 PFVVSARRKLASALY 314 >gi|302524879|ref|ZP_07277221.1| thioredoxin [Streptomyces sp. AA4] gi|302433774|gb|EFL05590.1| thioredoxin [Streptomyces sp. AA4] Length=306 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 137/308 (45%), Positives = 188/308 (62%), Gaps = 13/308 (4%) Query 8 LGPAMAGAVDLSGIKQRAQ--QNAAASTDADRALSTPS----GVTEITEANFEDEVIVRS 61 + A++GAVDLS +K RA+ +N S A R TP+ V ++TEA F+ V+ RS Sbjct 1 MSAALSGAVDLSALKARAEASRNQPPSA-AGRPEGTPAPPSDTVLDVTEATFQS-VVERS 58 Query 62 DEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTV 121 VVV LW+ SE C L L LA G W LA V+V+ PR+AQ FG Q+VPTV Sbjct 59 LNQLVVVDLWAGFSEQCQQLTAVLERLAGEGGGAWVLAKVDVEANPRIAQAFGAQSVPTV 118 Query 122 VALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEES-----TEVDPAVAQA 176 VA+A GQP+ +F G P ++ +W+ SLL A +L G ++EE+ DP +A Sbjct 119 VAIAGGQPVDAFSGALPEPEIRKWLGSLLDALRDRLPGIRAAEEARGPVEEPEDPRFTEA 178 Query 177 RQQLEDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDI 236 + E GD+ AA+ +Y+ ILDA P + AK A+ Q++F RA A P A A++ DI Sbjct 179 EEAFERGDYAAAQAAYERILDAEPANELAKNALAQVKFTARAEAADPSAREKAEADPKDI 238 Query 237 DAAFAAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGR 296 DA AAAD+ + QDV AF RL+ +VRRT+G++R RVR L+ LFELFDPAD V+ R Sbjct 239 DAQLAAADLDIAEQDVEGAFRRLVDVVRRTAGDDRNRVREHLVALFELFDPADERVMKAR 298 Query 297 RNLANALY 304 R+LA+AL+ Sbjct 299 RDLASALF 306 >gi|326385040|ref|ZP_08206712.1| Thioredoxin domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326196254|gb|EGD53456.1| Thioredoxin domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length=306 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 140/309 (46%), Positives = 188/309 (61%), Gaps = 19/309 (6%) Query 12 MAGAVDLSGIK------------QRAQQNAAASTDADRALS-TPSGVTEITEANFEDEVI 58 MAGAVDLS +K RA+ + DA +A + T S V ++ E +FE E++ Sbjct 1 MAGAVDLSVLKATAEGRHAPRGPTRARPAPESRPDAGQAGAPTGSAVIDVDELSFETEIV 60 Query 59 VRSDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAV 118 RS VVV LW+ +E L TL+ LA A+ G+W LA V+VD PR+AQ FG Q+V Sbjct 61 ERSTRQLVVVDLWAAWAEPSRQLSPTLASLAEASGGRWVLARVDVDANPRIAQAFGAQSV 120 Query 119 PTVVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEEST---EVDPAVAQ 175 PTVVAL AG+P++ F+G QPADQ+ W+D + A AG L + E E DP +A Sbjct 121 PTVVALVAGRPVAMFEGAQPADQIQGWIDEIF-AKAGHLLPELADEGGAPEPEQDPRMAA 179 Query 176 ARQQLEDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDD 235 A + + GD A +Y+AI P +VEA + +R +EF+ RA A PD V+ D+ D Sbjct 180 AEELMNSGDMDGALDAYRAIAQLEPNNVEAASVVRNLEFVTRAQAHDPDVVN--DAAPGD 237 Query 236 IDAAFAAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAG 295 +DA AAADV +L Q AAF+RLI L++ T ++R R R RL+ELF+LFDPA+P VVA Sbjct 238 VDAQLAAADVLLLGQRPEAAFDRLIDLIKVTRDDDRGRARARLLELFDLFDPAEPFVVAA 297 Query 296 RRNLANALY 304 RR LA ALY Sbjct 298 RRKLATALY 306 >gi|257056826|ref|YP_003134658.1| thioredoxin [Saccharomonospora viridis DSM 43017] gi|256586698|gb|ACU97831.1| thioredoxin [Saccharomonospora viridis DSM 43017] Length=299 Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 122/267 (46%), Positives = 163/267 (62%), Gaps = 9/267 (3%) Query 45 VTEITEANFEDEVIVRSDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVD 104 V ++TEA F+ EV+ RS VVV LW+ C L L LA + G W LA V+VD Sbjct 35 VIDVTEATFQAEVVERSLRQLVVVDLWADWCGPCKQLGPVLEKLAGESNGAWVLAKVDVD 94 Query 105 VAPRVAQIFGVQAVPTVVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKL------- 157 PR++Q+FGVQ++PTV+A+A GQP+ +F G P Q+ +W+ LL A KL Sbjct 95 ANPRISQLFGVQSIPTVIAIAGGQPVDAFSGALPEPQIRQWLTQLLDALRDKLPGIQAAQ 154 Query 158 KGAASSEESTEVDPAVAQARQQLEDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIR 217 +G A EE DP A+A GD+ AA+ +YQ ILD+ P + +AKAA+ Q+EF R Sbjct 155 QGGAQPEEPQ--DPRFAEAENAFAQGDYAAAKAAYQRILDSEPNNEQAKAALTQVEFAER 212 Query 218 ATAQRPDAVSVADSLSDDIDAAFAAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTR 277 A P V+ AD +D+DA +AADV+V +V F RLIA +RRTSG +R RVR Sbjct 213 AANVDPSVVAKADEDPNDLDAQLSAADVEVARGEVEQGFARLIAAIRRTSGSDRDRVREH 272 Query 278 LIELFELFDPADPEVVAGRRNLANALY 304 L+ LFELFDPAD V RR+LA+AL+ Sbjct 273 LVGLFELFDPADERVAKARRDLASALF 299 >gi|256380072|ref|YP_003103732.1| thioredoxin domain-containing protein [Actinosynnema mirum DSM 43827] gi|255924375|gb|ACU39886.1| thioredoxin domain protein [Actinosynnema mirum DSM 43827] Length=326 Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 128/269 (48%), Positives = 172/269 (64%), Gaps = 13/269 (4%) Query 45 VTEITEANFEDEVIVRSDEVPVVVLL---WSPRSEVCVDLLDTLSGLAAAAKGKWSLASV 101 V ++TEA F+ V+ RS E+PVVV L WSP + L L LA A G W LA V Sbjct 62 VVDVTEATFQ-PVVERSLEIPVVVELTASWSPEAG---QLSPVLERLAEAGGGAWLLARV 117 Query 102 NVDVAPRVAQIFGVQAVPTVVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAA 161 ++D +PR+ Q+FGVQ+VPTVVA+A GQPI +F G P D++++W+D LL A +L G A Sbjct 118 DLDASPRIGQLFGVQSVPTVVAVAGGQPIDAFAGPLPEDEIAQWIDRLLDALRDRLPGIA 177 Query 162 SSEESTEV------DPAVAQARQQLEDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFL 215 ++E + DP + A E+GDF AA +Y+AIL A PG+ EAKAA+ Q+ F Sbjct 178 AAEANRGAPAPEPEDPRLTAAETAFEEGDFAAAEAAYEAILSAEPGNAEAKAALAQVRFT 237 Query 216 IRATAQRPDAVSVADSLSDDIDAAFAAADVQVLNQDVSAAFERLIALVRRTSGEERTRVR 275 R + P V+ AD+ DD++A AAADVQ++NQ+V AF+RL+ VRR G++R +VR Sbjct 238 ARVESLDPAVVATADANPDDLEAQLAAADVQIVNQEVEQAFQRLVDTVRRVFGDDRDKVR 297 Query 276 TRLIELFELFDPADPEVVAGRRNLANALY 304 LI LFELF DP V RRNLA+ALY Sbjct 298 NHLIALFELFPADDPAVAKARRNLASALY 326 >gi|300783526|ref|YP_003763817.1| thioredoxin [Amycolatopsis mediterranei U32] gi|299793040|gb|ADJ43415.1| thioredoxin [Amycolatopsis mediterranei U32] gi|340524912|gb|AEK40117.1| thioredoxin [Amycolatopsis mediterranei S699] Length=323 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 126/303 (42%), Positives = 178/303 (59%), Gaps = 15/303 (4%) Query 16 VDLSGIKQRAQ--------QNAAASTDADRALSTPSGVTEITEANFEDEVIVRSDEVPVV 67 VDLS +K RA+ A D ++ V ++TEA F+ EV+ RS VV Sbjct 22 VDLSALKARAEAAQRQPAPPAGPAGGDGPPRPASGDAVIDVTEATFQAEVVERSLHQLVV 81 Query 68 VLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVALAAG 127 V LW+ C L L +AA + G W +A V+VD PR+AQ+FG Q++PT+VA+A G Sbjct 82 VDLWAEWCGPCKQLSPVLERMAAESGGAWVVAKVDVDANPRIAQLFGAQSIPTIVAIAGG 141 Query 128 QPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSE------ESTEVDPAVAQARQQLE 181 QP+ +F G P ++ +W+++LL A KL G +E E E DP +A + E Sbjct 142 QPVDAFSGALPEPEIRKWINALLDALRDKLPGIRDAEAAGGPVEEPE-DPRFTEAEEAFE 200 Query 182 DGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAFA 241 GDF AA+ +Y+ ILD P + AK A+ Q++F RA + PDA + AD+ D+ A Sbjct 201 RGDFAAAQAAYERILDVEPANELAKNALAQVKFTARAESADPDARAKADADPSDLAAQLD 260 Query 242 AADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLAN 301 AAD+ + DV A F+RLI VRRT+GE+R RVR L+ LF+LFDPAD V+ RR+LA+ Sbjct 261 AADLDIAENDVEAGFKRLIDAVRRTAGEDRNRVREHLVALFDLFDPADDRVMKARRDLAS 320 Query 302 ALY 304 AL+ Sbjct 321 ALF 323 >gi|262201893|ref|YP_003273101.1| thioredoxin domain-containing protein [Gordonia bronchialis DSM 43247] gi|262085240|gb|ACY21208.1| Thioredoxin domain protein [Gordonia bronchialis DSM 43247] Length=313 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 132/315 (42%), Positives = 188/315 (60%), Gaps = 24/315 (7%) Query 12 MAGAVDLSGIKQRAQQNAAASTDA-----------DRALSTPSG----------VTEITE 50 M+GAVDL+G+K RA+ A + DR STP+ V ++T+ Sbjct 1 MSGAVDLAGLKARAEAQRAQAGGGPGGVPSSPPVPDRPQSTPASAPGTAAAGAAVIDVTD 60 Query 51 ANFEDEVIVRSDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVA 110 A+FED+V+ RS V+V LW+ C L L LA A+ G+W LA V+VD RVA Sbjct 61 ASFEDDVLNRSTAQLVLVDLWAEWCGPCKQLSPVLEKLANASGGRWVLAKVDVDANQRVA 120 Query 111 QIFGVQAVPTVVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGA-ASSEESTEV 169 Q F VQ++P VVA+ GQP+++F G++ +++ W+D +L+ L G + E Sbjct 121 QAFRVQSIPMVVAIVHGQPVAAFNGVRSEAEITAWIDEILAQVGDSLTGVPGPAAEPEPE 180 Query 170 DPAVAQARQQLEDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVA 229 DP + A +++ GDF A Y+AI ++ P + EA +A R +EF++RA A P V A Sbjct 181 DPRMVAAEEKMNAGDFDGALADYRAIAESEPDNTEAASAARNLEFVLRAQAHDPAIVQTA 240 Query 230 DSLSDDIDAAFAAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPAD 289 D+DA AAADV +L+Q AF+R+I +V+ TSG++RTR RTRL+ELFELFDPA+ Sbjct 241 --APGDVDAQLAAADVLLLSQQPEEAFDRIIGVVKATSGDDRTRARTRLLELFELFDPAE 298 Query 290 PEVVAGRRNLANALY 304 P VVA RR LA+ALY Sbjct 299 PFVVAARRKLASALY 313 >gi|54023044|ref|YP_117286.1| putative thioredoxin [Nocardia farcinica IFM 10152] gi|54014552|dbj|BAD55922.1| putative thioredoxin [Nocardia farcinica IFM 10152] Length=278 Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 120/246 (49%), Positives = 170/246 (70%), Gaps = 1/246 (0%) Query 48 ITEANFEDEVIVRSDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAP 107 ++EA+FE +V+ RS +VPVVV L+S RS V+L+ TL + AA G W LA+V + Sbjct 23 VSEADFETKVLRRSLQVPVVVALYSQRSPGSVELVRTLERMVAADGGTWDLATVEAEANM 82 Query 108 RVAQIFGVQAVPTVVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEEST 167 R+AQ VQ +PTV+A+AAGQP++ F+G QP Q+ +W+D+++ A AGKL+G + Sbjct 83 RIAQALRVQGIPTVIAIAAGQPLADFEGAQPEPQVRQWIDAVVQAVAGKLEGDGGEPQPQ 142 Query 168 EVDPAVAQARQQLEDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVS 227 E DP A + LE GD AA +Y+ IL A P + EAK A+RQ+ FL RA DAV+ Sbjct 143 E-DPRFVAAEEALERGDMAAAEAAYEQILAAEPNNTEAKGALRQLRFLARAQQVPADAVA 201 Query 228 VADSLSDDIDAAFAAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDP 287 AD+ ++DAA AAAD+++LNQ AAF+RLIA+V+R++G++RT+ RT L+ELFELFD Sbjct 202 TADADPANVDAAIAAADLELLNQQPEAAFDRLIAVVKRSAGDDRTKARTHLLELFELFDQ 261 Query 288 ADPEVV 293 A+P VV Sbjct 262 AEPFVV 267 >gi|134102655|ref|YP_001108316.1| thioredoxin [Saccharopolyspora erythraea NRRL 2338] gi|291004659|ref|ZP_06562632.1| thioredoxin [Saccharopolyspora erythraea NRRL 2338] gi|133915278|emb|CAM05391.1| thioredoxin [Saccharopolyspora erythraea NRRL 2338] Length=307 Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 132/296 (45%), Positives = 177/296 (60%), Gaps = 14/296 (4%) Query 12 MAGAVDLSGIKQRAQ-------QNAAASTDADRALSTPSGVTEITEANFEDEVIVRSDEV 64 MAGAVDLS +K RA Q AA +A A V ++TEA F+ EV+ RS +V Sbjct 1 MAGAVDLSALKSRADATARAGDQQPAAKGEAGAAPPAGGSVIDVTEATFQAEVVERSMQV 60 Query 65 PVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVAL 124 PVVV LW+ C L L LAA A G W LA ++VD PR+AQ+F VQ+VP V+A+ Sbjct 61 PVVVDLWATWCGPCKQLSPMLERLAAEAGGSWVLAKIDVDANPRIAQLFQVQSVPMVIAI 120 Query 125 AAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKG-------AASSEESTEVDPAVAQAR 177 A GQP+ +F G QP Q+ +W++SLL A +L G A + + + DP A Sbjct 121 AGGQPVEAFAGAQPEPQIRQWINSLLDAMRDQLPGIREAEAAAGGAAPAEQEDPRFTAAE 180 Query 178 QQLEDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDID 237 + LE GD+ AA +YQ IL++ P + +AKAA+ Q+ F RA + P AV AD+ DD+D Sbjct 181 EALERGDYAAAESAYQQILESEPANEQAKAALAQVRFSARAESADPSAVERADAAPDDLD 240 Query 238 AAFAAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVV 293 A AAAD +V Q V AF+RL+ V+RTSG++R RVR L+E+FELF D V Sbjct 241 AQLAAADAEVAAQRVEEAFDRLVRTVKRTSGDDRNRVRQHLVEMFELFPDGDERVT 296 >gi|255324532|ref|ZP_05365649.1| thioredoxin domain protein [Corynebacterium tuberculostearicum SK141] gi|255298438|gb|EET77738.1| thioredoxin domain protein [Corynebacterium tuberculostearicum SK141] Length=308 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 121/305 (40%), Positives = 173/305 (57%), Gaps = 7/305 (2%) Query 7 PLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVRSDEVPV 66 P + GA+DLS +K RA+ A + +TEANF+ +V+ RS EVPV Sbjct 4 PNNAYVGGALDLSQVKARAEARQKAQESPQTSAGGVQPFFTVTEANFDQDVVRRSTEVPV 63 Query 67 VVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVALAA 126 VVL+ + RS L L+ LAA + +A V+ D P+VAQ FGV+ +PTVVAL A Sbjct 64 VVLIGTARSTQSEQLKTDLADLAAQGNLSFLVAYVDADATPQVAQAFGVKNLPTVVALGA 123 Query 127 GQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEES-----TEVDPAVAQARQQLE 181 GQP+++F+G QP D L +WVD+L+ +LKG +E S EVDP + +A L Sbjct 124 GQPLTNFEGAQPKDALKQWVDTLVQNVGPQLKGLQGNEASEQPQEEEVDPRLQEAESFLN 183 Query 182 DGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIR--ATAQRPDAVSVADSLSDDIDAA 239 GDF A Y +IL++ P +V+ K A L R Q D ++ A+ D+D Sbjct 184 AGDFDGALNVYNSILESEPDNVQIKQARDTTVLLQRLDPANQTEDPIAAAEGDKGDVDKQ 243 Query 240 FAAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNL 299 AAD +V+ AF+RLI ++ T+G+E++R+R RL+ELF LF+ DP V+ R L Sbjct 244 MRAADAEVVAGAPEKAFDRLIETMKTTAGDEKSRLRERLLELFGLFEGNDPRVMEARTKL 303 Query 300 ANALY 304 A+ALY Sbjct 304 ASALY 308 >gi|227503875|ref|ZP_03933924.1| thioredoxin family protein [Corynebacterium striatum ATCC 6940] gi|227199498|gb|EEI79546.1| thioredoxin family protein [Corynebacterium striatum ATCC 6940] Length=296 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 121/304 (40%), Positives = 174/304 (58%), Gaps = 18/304 (5%) Query 9 GPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVT---EITEANFEDEVIVRSDEVP 65 GP + GA+DL +KQ+A+ A DA P+G+ E+TE NFE ++I RS EVP Sbjct 3 GPYVGGALDLGALKQKAE----APNDA------PAGIAAFFEVTEENFEADLIRRSAEVP 52 Query 66 VVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVALA 125 V+ L+ SPRS L L LA A + + +N DV P+VAQ+FG+Q +PT VA+A Sbjct 53 VIALIGSPRSPASEQLKADLKSLAEAGNLSFIVGYINADVVPQVAQVFGIQNLPTTVAIA 112 Query 126 AGQPISSFQGLQPADQLSRWVDSLLSATAGKLK---GAASSEESTEVDPAVAQARQQLED 182 AGQP+++F+G QP D L +W +L+ +L+ G + EES D + A + L Sbjct 113 AGQPVTNFEGAQPKDALEQWTGTLVEKLGPQLRGLSGGEAQEESEAPDSRLHVAEEALNR 172 Query 183 GDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIR--ATAQRPDAVSVADSLSDDIDAAF 240 GDF AA Y IL + P +VE K A L R + D V+ AD+ D+ Sbjct 173 GDFDAAIAQYDEILASEPDNVEIKQARNTTVLLKRLDPANRSEDPVAAADAEPQDVAKQL 232 Query 241 AAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLA 300 AAD +V+ AF+RLI ++RT+G+E+ ++ RL+ELF LF+ +DP V+ R LA Sbjct 233 DAADAEVVAGTPEKAFDRLIEGMKRTAGDEKQTLKDRLLELFGLFESSDPRVLKARTQLA 292 Query 301 NALY 304 +ALY Sbjct 293 SALY 296 >gi|227832906|ref|YP_002834613.1| hypothetical protein cauri_1080 [Corynebacterium aurimucosum ATCC 700975] gi|262182605|ref|ZP_06042026.1| hypothetical protein CaurA7_01320 [Corynebacterium aurimucosum ATCC 700975] gi|227453922|gb|ACP32675.1| hypothetical protein cauri_1080 [Corynebacterium aurimucosum ATCC 700975] Length=307 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 124/311 (40%), Positives = 185/311 (60%), Gaps = 21/311 (6%) Query 9 GPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVT---EITEANFEDEVIVRSDEVP 65 GP + GA+DL IKQ+A+ A A S +GV E+TE NFE++++ RS EVP Sbjct 3 GPYVGGALDLGAIKQQAEAKAKAQEQGTTGAS--AGVQPFFEVTEQNFENDLVRRSAEVP 60 Query 66 VVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVALA 125 V+ L+ SPRS L +AAA K+ + +N DV P+VAQ+FGVQ +PT VA+A Sbjct 61 VIALIGSPRSPASEQLKKDFEEMAAAGGLKFIVGYINADVVPQVAQVFGVQNLPTTVAIA 120 Query 126 AGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTE------VDPAVAQARQQ 179 AGQP+++F+G QP + L +WV +++ +LKG EE+ E DP ++ A + Sbjct 121 AGQPVTNFEGGQPRENLEQWVAAIVDKLGPQLKGLPKQEEAGEGPAEEVADPRLSLAEEA 180 Query 180 LEDGDFVAARKSYQAILDANPGSVEAKAA------IRQIEFLIRATAQRPDAVSVADSLS 233 L GDF +A +Y+ IL A P +VE K A +++++ R+ A + + +S Sbjct 181 LNRGDFDSAIATYEEILAAEPDNVEIKQARDTTLLLKRLDPANRSEDPIAAADAAPEDVS 240 Query 234 DDIDAAFAAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVV 293 +D AAD +V+ AFERLI ++RT+G+E+ +++TRL+ELF LFD DP V+ Sbjct 241 KQLD----AADAEVVAGAPDRAFERLIEAMKRTAGDEKEQLKTRLLELFGLFDSGDPRVL 296 Query 294 AGRRNLANALY 304 A R LA+ALY Sbjct 297 AARTKLASALY 307 >gi|296119537|ref|ZP_06838095.1| thioredoxin-related protein [Corynebacterium ammoniagenes DSM 20306] gi|295967420|gb|EFG80687.1| thioredoxin-related protein [Corynebacterium ammoniagenes DSM 20306] Length=312 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 116/305 (39%), Positives = 178/305 (59%), Gaps = 13/305 (4%) Query 12 MAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVT---EITEANFEDEVIVRSDEVPVVV 68 + GA+DLS +K +A+ AA ++ A T G+ ++T+ NFE+EV+ RS ++PV+ Sbjct 9 VGGALDLSQVKAQAEAREAAKNQSNSAGQT-GGIAPFFDVTDGNFENEVVRRSTQIPVIA 67 Query 69 LLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVALAAGQ 128 ++ +PRS L LA A K+ + ++ D P++AQ+FGVQ +PTVVA+ AGQ Sbjct 68 IIGTPRSPASEQLKADFKELAEAGGLKFIVGYIDADTFPQIAQVFGVQQLPTVVAIGAGQ 127 Query 129 PISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSE-----ESTEV--DPAVAQARQQLE 181 P+++F+G QP + L +WVD+L+ KLKG + + ES EV DP +A+A +L Sbjct 128 PLTNFEGAQPKEALQQWVDALVDQIGPKLKGLDAQDMPQEAESQEVAEDPRLAEAESKLN 187 Query 182 DGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIR--ATAQRPDAVSVADSLSDDIDAA 239 DF A Y +IL P + E + A + L R + D ++ A ++IDA Sbjct 188 QSDFDGAMAVYDSILADEPDNAEIRQARNTTQLLKRLDPANRTTDPIAAAQQEPENIDAQ 247 Query 240 FAAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNL 299 F AAD +++ + A F+RLIAL+ E+ +VR RL+ELF LFD DP V+A R L Sbjct 248 FNAADAEIVAGNPEAGFDRLIALIAGNVSGEKDKVRDRLLELFALFDATDPRVLAARTKL 307 Query 300 ANALY 304 A++LY Sbjct 308 ASSLY 312 >gi|317508561|ref|ZP_07966223.1| thioredoxin [Segniliparus rugosus ATCC BAA-974] gi|316253144|gb|EFV12552.1| thioredoxin [Segniliparus rugosus ATCC BAA-974] Length=304 Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 125/307 (41%), Positives = 176/307 (58%), Gaps = 17/307 (5%) Query 12 MAGAVDLSGIKQRAQQNAAASTDADRALSTP---SGVTEITEANFEDEVIVRSDEVPVVV 68 M GAVDLS +K A + A + + +TP V ++ EA+FE +V+ RS VVV Sbjct 1 MYGAVDLSALKANADRPARPAQPSQEP-ATPVDSEHVFDVAEADFESQVLERSTRQLVVV 59 Query 69 LLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVALAAGQ 128 LW+ + C L L GLAA + G+W LA V+VD R+AQ+FG +++P VVA+A G+ Sbjct 60 DLWATWCQPCKQLSPVLEGLAAQSGGRWVLAKVDVDENQRIAQVFGARSIPMVVAIAGGR 119 Query 129 PISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQLEDGDFVAA 188 P+S+FQG QP + +W+ +L A +EE T DP + A + L D DF A Sbjct 120 PVSAFQGAQPEPVVKQWLADVLEQVAPLFGQEEDAEEPT--DPRLVAASEALADNDFAKA 177 Query 189 RKSYQAI----LDANPGSVE-------AKAAIRQIEFLIRATAQRPDAVSVADSLSDDID 237 R ++ I D GS + A+A +R++ FL R +A PDAV+ A S D+D Sbjct 178 RALFEDIKERGTDETEGSKKAAARQATAEAGLREVAFLERVSAISPDAVAAAQENSGDVD 237 Query 238 AAFAAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRR 297 A AD++V AF+RLI +V+ + +T R RL+ELFELFDPADP V+A RR Sbjct 238 AQLEVADLEVAAGRAGQAFDRLIGVVKTSPEPGKTTARKRLLELFELFDPADPTVIAARR 297 Query 298 NLANALY 304 LA+ALY Sbjct 298 KLASALY 304 >gi|296138995|ref|YP_003646238.1| thioredoxin [Tsukamurella paurometabola DSM 20162] gi|296027129|gb|ADG77899.1| Thioredoxin domain protein [Tsukamurella paurometabola DSM 20162] Length=323 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 126/288 (44%), Positives = 173/288 (61%), Gaps = 6/288 (2%) Query 11 AMAGAVDLSGIKQRA------QQNAAASTDADRALSTPSGVTEITEANFEDEVIVRSDEV 64 AM+GAVDLSG+K RA Q +AA + D A + V ++T+ F EVI S Sbjct 24 AMSGAVDLSGLKARAEAKATQQARSAAGAEPDGAPAGGGAVLDVTDQTFPAEVIDASARQ 83 Query 65 PVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVAL 124 VVV L + SE + L+ LAA G+W V+VD AP VAQ FG Q+VP V+A+ Sbjct 84 LVVVALTASYSEQSAAMTAVLAQLAAQDGGRWKFVRVDVDAAPGVAQAFGAQSVPMVIAV 143 Query 125 AAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQLEDGD 184 A G+ +++F G QP + +W+D +L+ L GA + DP A Q DGD Sbjct 144 AGGRAVTAFAGAQPESAVRQWLDDVLAQIGPALGGAEDAPAEAASDPRREAAEQLAADGD 203 Query 185 FVAARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRPDAVSVADSLSDDIDAAFAAAD 244 + A+ +Y+AIL A+PG EA AA++Q+ F RATA P AV+ AD+ D+DAA AAAD Sbjct 204 YAGAQAAYEAILHADPGDAEAAAAVKQMGFFARATAAEPGAVARADADPKDVDAALAAAD 263 Query 245 VQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEV 292 ++L AAF RLI+ +R T+G++R +RTRL+ELFELFDP+D V Sbjct 264 EELLTGAPQAAFARLISAIRITAGDQRAALRTRLLELFELFDPSDAMV 311 >gi|237785851|ref|YP_002906556.1| hypothetical protein ckrop_1269 [Corynebacterium kroppenstedtii DSM 44385] gi|237758763|gb|ACR18013.1| conserved hypothetical protein [Corynebacterium kroppenstedtii DSM 44385] Length=334 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 106/265 (40%), Positives = 160/265 (61%), Gaps = 12/265 (4%) Query 47 EITEANFEDEVIVRSDEVPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVA 106 ++TEANFE++V+ RS +VPV+V + S RS D++ L LA A KW A+V+ D Sbjct 75 DVTEANFENDVLKRSLQVPVIVAISSTRSPDSQDIVQNLEALARQANYKWIFANVSADTV 134 Query 107 PRVAQIFGVQAVPTVVALAAGQPISSFQGLQPADQLSRWVDSLLSATAGKL-------KG 159 P++AQ FGV+A+PTV+ALA G+P+ + +G QP +QL W+D +L KL KG Sbjct 135 PQIAQAFGVRAIPTVIALANGRPLDAREGQQPKEQLQGWIDQILQIVGDKLPGIPDAEKG 194 Query 160 AASSEESTEVDPAVAQARQQLEDGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIRAT 219 + + +E DP + A + L +GDF AA +Y I+DA P + EAKAA + L R + Sbjct 195 STTQDEQPPSDPRLDAAEEALNNGDFDAALAAYDKIIDAEPHNAEAKAARANVSLLKRVS 254 Query 220 AQRPDAVSVADSLSDDIDAAFAAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLI 279 +D + + + FA AD +++ AF L+ L+R ++G+++T+V+ RLI Sbjct 255 -----EAQASDHPTSEPEKTFAQADQYMISSKEEDAFRVLLDLLRVSAGDQKTQVKDRLI 309 Query 280 ELFELFDPADPEVVAGRRNLANALY 304 ELF L DPADP V RR +A+AL+ Sbjct 310 ELFTLCDPADPRVATARREMASALF 334 >gi|311740597|ref|ZP_07714424.1| thioredoxin domain protein [Corynebacterium pseudogenitalium ATCC 33035] gi|311304117|gb|EFQ80193.1| thioredoxin domain protein [Corynebacterium pseudogenitalium ATCC 33035] Length=308 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 117/305 (39%), Positives = 171/305 (57%), Gaps = 7/305 (2%) Query 7 PLGPAMAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVRSDEVPV 66 P + GA+DLS +K RA+ A + +TE+NF+ +V+ RS EVPV Sbjct 4 PNNAYVGGALDLSQVKARAEARQKAQESPQPSAGGVQPFFTVTESNFDQDVVRRSTEVPV 63 Query 67 VVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVALAA 126 VVL+ + RS L L+ LAA + +A V+ D P+VAQ FGV+ +PTVVAL A Sbjct 64 VVLIGTARSTQSEQLKTDLADLAAQGNLSFLVAYVDADATPQVAQAFGVKNLPTVVALGA 123 Query 127 GQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASS-----EESTEVDPAVAQARQQLE 181 GQP+++F+G QP + L +WVD+L+ +LKG + + E DP + +A L Sbjct 124 GQPLTNFEGAQPKEALKQWVDTLVQNVGPQLKGLQGNEASEQPQEEEEDPRLQEAESFLN 183 Query 182 DGDFVAARKSYQAILDANPGSVEAKAAIRQIEFLIR--ATAQRPDAVSVADSLSDDIDAA 239 GDF A Y +IL++ P +V+ K A L R Q D ++ A+ D+D Sbjct 184 TGDFDGALNVYNSILESEPDNVQIKQARDTTVLLKRLDPANQTEDPIAAAEGDKGDVDKQ 243 Query 240 FAAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNL 299 AAD +V+ AF+RLI ++ T+G+E++RVR RL+ELF LF+ DP V+ R L Sbjct 244 MRAADAEVVAGAPEKAFDRLIETMKTTAGDEKSRVRERLLELFGLFEGNDPRVLEARTKL 303 Query 300 ANALY 304 A+ALY Sbjct 304 ASALY 308 >gi|25027878|ref|NP_737932.1| hypothetical protein CE1322 [Corynebacterium efficiens YS-314] gi|23493161|dbj|BAC18132.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length=319 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 119/301 (40%), Positives = 177/301 (59%), Gaps = 13/301 (4%) Query 13 AGAVDLSGIKQRAQ--QNAAASTDADRALSTPSGVTEITEANFEDEVIVRSDEVPVVVLL 70 +GA+DL +K RA+ Q + A ++T +T +T N E+EV+ RS +VPV+VL+ Sbjct 23 SGAIDLGEVKARAEARQKNHEAGPASHGIAT--SIT-VTMDNLENEVLRRSIQVPVIVLI 79 Query 71 WSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVALAAGQPI 130 + RS V L + LA + + A V+ D P VAQ+FGVQ +PT +A+AAG+P+ Sbjct 80 GTSRSPVSEQLRTDFTTLADKSGLSFIFAYVDADTTPDVAQVFGVQGLPTTIAVAAGRPL 139 Query 131 SSFQGLQPADQLSRWVDSLLSATAGKL----KGAASSEESTEVDPAVAQARQQLEDGDFV 186 + FQG QPA+ + +WV+S++ A +L +GA ++E DP + A L G+F Sbjct 140 ADFQGGQPAEAIEQWVNSVIQAVGPQLEGLPEGAPAAESVAPEDPRLDAATDALNTGNFE 199 Query 187 AARKSYQAILDANPGSVEAKAAIRQIEFLIRATAQRP---DAVSVADSLSDDIDAAFAAA 243 A + Y+ IL P + E K A R I L+ P D ++ AD+ D D FAAA Sbjct 200 EAIRIYEEILAEEPKNTEIKQA-RDIAMLMSRLGSTPGDTDVIAEADADPGDPDKVFAAA 258 Query 244 DVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLANAL 303 D +++ + AAF RLIAL+ RT+G+E+ V+ RLIELF LFD DP V++ R +A+AL Sbjct 259 DAEIVAGNPEAAFNRLIALLTRTAGKEKDAVKNRLIELFGLFDATDPRVLSARGRMASAL 318 Query 304 Y 304 Y Sbjct 319 Y 319 >gi|296394236|ref|YP_003659120.1| thioredoxin [Segniliparus rotundus DSM 44985] gi|296181383|gb|ADG98289.1| Thioredoxin domain protein [Segniliparus rotundus DSM 44985] Length=311 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 122/313 (39%), Positives = 174/313 (56%), Gaps = 22/313 (7%) Query 12 MAGAVDLSGIKQRAQQNAAASTDADRALST--------PSGVTEITEANFEDEVIVRSDE 63 M GAVDLS +K +A + A + + + + V ++ EA+FE +V+ RS Sbjct 1 MYGAVDLSALKAQADRPAPPAQSPEGSAAGTAAGPAAESEHVFDVDEADFESQVLERSTR 60 Query 64 VPVVVLLWSPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVA 123 VVV LW+P + C L L GLAA + G+W+LA V+VD R+AQ+FG +++P VVA Sbjct 61 QVVVVDLWAPWCQPCKQLSPVLEGLAAQSGGRWALAKVDVDANQRIAQVFGARSIPMVVA 120 Query 124 LAAGQPISSFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPAVAQARQQLEDG 183 +A G+P+S+FQG QP + +W+ +L A S +E VDP + A + L G Sbjct 121 IAGGRPVSAFQGAQPEATVKQWLADVLEQAAPLYGQEESGDEP--VDPRLVAASEALSAG 178 Query 184 DFVAARKSYQAI----LDANPGSVE-------AKAAIRQIEFLIRATAQRP-DAVSVADS 231 DF A+ ++ I D GS + A+A +R++ FL R +A P + V A Sbjct 179 DFAEAKALFEDIKARGTDETEGSQKAAARKATAEAGLREVAFLERVSALSPENTVRAAQE 238 Query 232 LSDDIDAAFAAADVQVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPE 291 D A AD++V AF+RLIALVR + +T R RL+ELFELFDPADP Sbjct 239 EPGDTAAQLDMADLEVAAGRAEQAFDRLIALVRTSPDPGKTTARVRLLELFELFDPADPT 298 Query 292 VVAGRRNLANALY 304 V+A RR LA+ALY Sbjct 299 VIAARRKLASALY 311 >gi|227501710|ref|ZP_03931759.1| thioredoxin domain protein [Corynebacterium accolens ATCC 49725] gi|227077735|gb|EEI15698.1| thioredoxin domain protein [Corynebacterium accolens ATCC 49725] Length=305 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 117/299 (40%), Positives = 168/299 (57%), Gaps = 8/299 (2%) Query 12 MAGAVDLSGIKQRAQQNAAASTDADRALSTPSGVTEITEANFEDEVIVRSDEVPVVVLLW 71 + GA+DLS +K RA+ A P +TEANFE EV+ RS EVPVVVL+ Sbjct 9 VGGALDLSQVKARAEARQQAQEQPQSNGVQP--FFTVTEANFETEVVRRSTEVPVVVLIG 66 Query 72 SPRSEVCVDLLDTLSGLAAAAKGKWSLASVNVDVAPRVAQIFGVQAVPTVVALAAGQPIS 131 + RS L L LAAA + + V+ D P+VAQ FGV+ +PTVVA+ AGQP++ Sbjct 67 TSRSTQSDQLKQDLQELAAAGNLSFLVGYVDADATPQVAQAFGVKNLPTVVAIGAGQPLT 126 Query 132 SFQGLQPADQLSRWVDSLLSATAGKLKGAASSEESTEVDPA----VAQARQQLEDGDFVA 187 +F+G QP + L +W+DSL+ +LKG ++ + E + + +A L GDF Sbjct 127 NFEGAQPKEALKQWLDSLVENVGPQLKGLEAAPAAAEEEEEDDPRLQEAESFLNSGDFDG 186 Query 188 ARKSYQAILDANPGSVEAKAAIRQIEFLIR--ATAQRPDAVSVADSLSDDIDAAFAAADV 245 A K Y++IL+A P + + K A + L R Q D ++ AD DI AAD Sbjct 187 AIKVYESILEAEPDNTQIKQARDTTKLLKRLDPANQTEDPIAAADGDKGDIGKQMHAADA 246 Query 246 QVLNQDVSAAFERLIALVRRTSGEERTRVRTRLIELFELFDPADPEVVAGRRNLANALY 304 +V+ AF+RLI ++ T+G+E+ ++R RL+ELF LF DP V+ R LA+ALY Sbjct 247 EVVAGAAENAFDRLIEAMKVTAGDEKAQLRERLLELFGLFAGNDPRVLEARTKLASALY 305 Lambda K H 0.315 0.128 0.351 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 511987440690 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40