BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1325c Length=603 Score E Sequences producing significant alignments: (Bits) Value gi|57116848|ref|YP_177799.1| PE-PGRS family protein [Mycobacteri... 971 0.0 gi|31792521|ref|NP_855014.1| PE-PGRS family protein [Mycobacteri... 969 0.0 gi|339294307|gb|AEJ46418.1| PE-PGRS family protein [Mycobacteriu... 947 0.0 gi|15840779|ref|NP_335816.1| PE_PGRS family protein [Mycobacteri... 820 0.0 gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobac... 159 2e-36 gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobac... 159 2e-36 gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobac... 157 7e-36 gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobac... 148 3e-33 gi|148822671|ref|YP_001287425.1| PE-PGRS family protein [Mycobac... 146 8e-33 gi|339631519|ref|YP_004723161.1| PE-PGRS family protein [Mycobac... 146 1e-32 gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobact... 146 1e-32 gi|339294428|gb|AEJ46539.1| hypothetical protein CCDC5079_1349 [... 146 1e-32 gi|15840912|ref|NP_335949.1| PE_PGRS family protein [Mycobacteri... 145 1e-32 gi|57116866|ref|YP_177813.1| PE-PGRS family protein [Mycobacteri... 145 1e-32 gi|339298066|gb|AEJ50176.1| hypothetical protein CCDC5180_1339 [... 145 2e-32 gi|224989857|ref|YP_002644544.1| PE-PGRS family protein [Mycobac... 145 3e-32 gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobact... 144 3e-32 gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobac... 144 3e-32 gi|31792646|ref|NP_855139.1| PE-PGRS family protein [Mycobacteri... 144 3e-32 gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacter... 144 4e-32 gi|121637382|ref|YP_977605.1| PE-PGRS family protein [Mycobacter... 144 4e-32 gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacteri... 144 4e-32 gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobac... 144 5e-32 gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted p... 143 1e-31 gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacteri... 143 1e-31 gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobac... 143 1e-31 gi|57116996|ref|YP_177887.1| PE-PGRS family protein [Mycobacteri... 142 1e-31 gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacteriu... 142 1e-31 gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024... 142 2e-31 gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobac... 141 3e-31 gi|183985312|ref|YP_001853603.1| PE-PGRS family protein [Mycobac... 141 3e-31 gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobac... 140 7e-31 gi|183984157|ref|YP_001852448.1| PE-PGRS family protein [Mycobac... 140 9e-31 gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS... 139 2e-30 gi|253799499|ref|YP_003032500.1| PE-PGRS family protein [Mycobac... 137 5e-30 gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531... 137 7e-30 gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacteri... 136 9e-30 gi|340626105|ref|YP_004744557.1| PE-PGRS family protein [Mycobac... 136 1e-29 gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacteri... 135 2e-29 gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobac... 135 2e-29 gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobac... 135 2e-29 gi|118616864|ref|YP_905196.1| PE-PGRS family protein [Mycobacter... 133 1e-28 gi|183982702|ref|YP_001850993.1| PE-PGRS family protein, PE_PGRS... 132 2e-28 gi|339295509|gb|AEJ47620.1| putative PE family protein [Mycobact... 131 3e-28 gi|15842175|ref|NP_337212.1| PE_PGRS family protein [Mycobacteri... 131 3e-28 gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobac... 130 6e-28 gi|118618448|ref|YP_906780.1| PE-PGRS family protein [Mycobacter... 130 7e-28 gi|121638523|ref|YP_978747.1| PE-PGRS family protein [Mycobacter... 130 7e-28 gi|31793820|ref|NP_856313.1| PE-PGRS family protein [Mycobacteri... 130 7e-28 gi|289754754|ref|ZP_06514132.1| predicted protein [Mycobacterium... 130 8e-28 >gi|57116848|ref|YP_177799.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148661114|ref|YP_001282637.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148822548|ref|YP_001287302.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] 12 more sequence titles Length=603 Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust. Identities = 603/603 (100%), Positives = 603/603 (100%), Gaps = 0/603 (0%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ Sbjct 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN Sbjct 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 Query 121 GANGAPGTGQAGGAGGLLYGNGGAGGSGAPGQAGGPGGAAGLFGNGGAGGAGGDGPGNGA 180 GANGAPGTGQAGGAGGLLYGNGGAGGSGAPGQAGGPGGAAGLFGNGGAGGAGGDGPGNGA Sbjct 121 GANGAPGTGQAGGAGGLLYGNGGAGGSGAPGQAGGPGGAAGLFGNGGAGGAGGDGPGNGA 180 Query 181 AGGAGGAGGLLFGSGGAGGPGGVGNTGTGGLGGDGGAAGLFGAGGIGGAGGPGFNGGAGG 240 AGGAGGAGGLLFGSGGAGGPGGVGNTGTGGLGGDGGAAGLFGAGGIGGAGGPGFNGGAGG Sbjct 181 AGGAGGAGGLLFGSGGAGGPGGVGNTGTGGLGGDGGAAGLFGAGGIGGAGGPGFNGGAGG 240 Query 241 AGGRSGLFEVLAAGGAGGTGGLSVNGGTGGTGGTGGGGGLFSNGGAGGAGGFGVSGSAGG 300 AGGRSGLFEVLAAGGAGGTGGLSVNGGTGGTGGTGGGGGLFSNGGAGGAGGFGVSGSAGG Sbjct 241 AGGRSGLFEVLAAGGAGGTGGLSVNGGTGGTGGTGGGGGLFSNGGAGGAGGFGVSGSAGG 300 Query 301 NGGTGGDGGIFTGNGGTGGTGGTGTGNQLVGGEGGAGGAGGNAGILFGAGGIGGTGGTGL 360 NGGTGGDGGIFTGNGGTGGTGGTGTGNQLVGGEGGAGGAGGNAGILFGAGGIGGTGGTGL Sbjct 301 NGGTGGDGGIFTGNGGTGGTGGTGTGNQLVGGEGGAGGAGGNAGILFGAGGIGGTGGTGL 360 Query 361 GAPDPGGTGGKGGVGGIGGAGALFGPGGAGGTGGFGASSADQMAGGIGGSGGSGGAAKLI 420 GAPDPGGTGGKGGVGGIGGAGALFGPGGAGGTGGFGASSADQMAGGIGGSGGSGGAAKLI Sbjct 361 GAPDPGGTGGKGGVGGIGGAGALFGPGGAGGTGGFGASSADQMAGGIGGSGGSGGAAKLI 420 Query 421 GDGGAGGTGGDSVRGAAGSGGTGGTGGLIGDGGAGGAGGTGIEFGSVGGAGGAGGNAAGL 480 GDGGAGGTGGDSVRGAAGSGGTGGTGGLIGDGGAGGAGGTGIEFGSVGGAGGAGGNAAGL Sbjct 421 GDGGAGGTGGDSVRGAAGSGGTGGTGGLIGDGGAGGAGGTGIEFGSVGGAGGAGGNAAGL 480 Query 481 SGAGGAGGAGGFGETAGDGGAGGNAGLLNGDGGAGGAGGLGIAGDGGNGGKGGKAGMVGN 540 SGAGGAGGAGGFGETAGDGGAGGNAGLLNGDGGAGGAGGLGIAGDGGNGGKGGKAGMVGN Sbjct 481 SGAGGAGGAGGFGETAGDGGAGGNAGLLNGDGGAGGAGGLGIAGDGGNGGKGGKAGMVGN 540 Query 541 GGDGGAGGASVVANGGVGGSGGNATLIGNGGNGGNGGVGSAPGKGGAGGTAGLLGLNGSP 600 GGDGGAGGASVVANGGVGGSGGNATLIGNGGNGGNGGVGSAPGKGGAGGTAGLLGLNGSP Sbjct 541 GGDGGAGGASVVANGGVGGSGGNATLIGNGGNGGNGGVGSAPGKGGAGGTAGLLGLNGSP 600 Query 601 GLS 603 GLS Sbjct 601 GLS 603 >gi|31792521|ref|NP_855014.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|121637256|ref|YP_977479.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|31618110|emb|CAD94221.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] gi|121492903|emb|CAL71374.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|341601274|emb|CCC63947.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=603 Score = 969 bits (2505), Expect = 0.0, Method: Compositional matrix adjust. Identities = 602/603 (99%), Positives = 602/603 (99%), Gaps = 0/603 (0%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ Sbjct 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN Sbjct 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 Query 121 GANGAPGTGQAGGAGGLLYGNGGAGGSGAPGQAGGPGGAAGLFGNGGAGGAGGDGPGNGA 180 GANGAPGTGQAGGAGGLLYGNGGAGGSGAPGQAGGPGGAAGLFGNGGAGGAGGDGPGNGA Sbjct 121 GANGAPGTGQAGGAGGLLYGNGGAGGSGAPGQAGGPGGAAGLFGNGGAGGAGGDGPGNGA 180 Query 181 AGGAGGAGGLLFGSGGAGGPGGVGNTGTGGLGGDGGAAGLFGAGGIGGAGGPGFNGGAGG 240 AGGAGGAGGLLFGSGGAGGPGGVGNTGTGGLGGDGGAAGLFGAGGIGGAGGPGFNGGAGG Sbjct 181 AGGAGGAGGLLFGSGGAGGPGGVGNTGTGGLGGDGGAAGLFGAGGIGGAGGPGFNGGAGG 240 Query 241 AGGRSGLFEVLAAGGAGGTGGLSVNGGTGGTGGTGGGGGLFSNGGAGGAGGFGVSGSAGG 300 AGGRSGLFEVLAAGGAGGTGGLSVNGGTGGTGGTGGGGGLFSNGGAGGAGGFGVSGSAGG Sbjct 241 AGGRSGLFEVLAAGGAGGTGGLSVNGGTGGTGGTGGGGGLFSNGGAGGAGGFGVSGSAGG 300 Query 301 NGGTGGDGGIFTGNGGTGGTGGTGTGNQLVGGEGGAGGAGGNAGILFGAGGIGGTGGTGL 360 NGGTGGDGGIFTGNGGTGG GGTGTGNQLVGGEGGAGGAGGNAGILFGAGGIGGTGGTGL Sbjct 301 NGGTGGDGGIFTGNGGTGGAGGTGTGNQLVGGEGGAGGAGGNAGILFGAGGIGGTGGTGL 360 Query 361 GAPDPGGTGGKGGVGGIGGAGALFGPGGAGGTGGFGASSADQMAGGIGGSGGSGGAAKLI 420 GAPDPGGTGGKGGVGGIGGAGALFGPGGAGGTGGFGASSADQMAGGIGGSGGSGGAAKLI Sbjct 361 GAPDPGGTGGKGGVGGIGGAGALFGPGGAGGTGGFGASSADQMAGGIGGSGGSGGAAKLI 420 Query 421 GDGGAGGTGGDSVRGAAGSGGTGGTGGLIGDGGAGGAGGTGIEFGSVGGAGGAGGNAAGL 480 GDGGAGGTGGDSVRGAAGSGGTGGTGGLIGDGGAGGAGGTGIEFGSVGGAGGAGGNAAGL Sbjct 421 GDGGAGGTGGDSVRGAAGSGGTGGTGGLIGDGGAGGAGGTGIEFGSVGGAGGAGGNAAGL 480 Query 481 SGAGGAGGAGGFGETAGDGGAGGNAGLLNGDGGAGGAGGLGIAGDGGNGGKGGKAGMVGN 540 SGAGGAGGAGGFGETAGDGGAGGNAGLLNGDGGAGGAGGLGIAGDGGNGGKGGKAGMVGN Sbjct 481 SGAGGAGGAGGFGETAGDGGAGGNAGLLNGDGGAGGAGGLGIAGDGGNGGKGGKAGMVGN 540 Query 541 GGDGGAGGASVVANGGVGGSGGNATLIGNGGNGGNGGVGSAPGKGGAGGTAGLLGLNGSP 600 GGDGGAGGASVVANGGVGGSGGNATLIGNGGNGGNGGVGSAPGKGGAGGTAGLLGLNGSP Sbjct 541 GGDGGAGGASVVANGGVGGSGGNATLIGNGGNGGNGGVGSAPGKGGAGGTAGLLGLNGSP 600 Query 601 GLS 603 GLS Sbjct 601 GLS 603 >gi|339294307|gb|AEJ46418.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079] Length=603 Score = 947 bits (2449), Expect = 0.0, Method: Compositional matrix adjust. Identities = 595/603 (99%), Positives = 596/603 (99%), Gaps = 0/603 (0%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ Sbjct 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN Sbjct 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 Query 121 GANGAPGTGQAGGAGGLLYGNGGAGGSGAPGQAGGPGGAAGLFGNGGAGGAGGDGPGNGA 180 GANGAPGTGQAGGAGGLLYGNGGAGG+GAPGQAGGPGGAAGLFGNGGAGG GGDGPGNGA Sbjct 121 GANGAPGTGQAGGAGGLLYGNGGAGGAGAPGQAGGPGGAAGLFGNGGAGGGGGDGPGNGA 180 Query 181 AGGAGGAGGLLFGSGGAGGPGGVGNTGTGGLGGDGGAAGLFGAGGIGGAGGPGFNGGAGG 240 AGGAGGAGGLLFGSGGAGGPGGVGNTGTGGLGGDGGAAGLFGAGGIGGAGGPG NGGAGG Sbjct 181 AGGAGGAGGLLFGSGGAGGPGGVGNTGTGGLGGDGGAAGLFGAGGIGGAGGPGGNGGAGG 240 Query 241 AGGRSGLFEVLAAGGAGGTGGLSVNGGTGGTGGTGGGGGLFSNGGAGGAGGFGVSGSAGG 300 AGGRSGLFEVLAAGGAGGTGGLSVNGGTGGTGGTGGGGG SNGGAGGAGGFGVSGSAGG Sbjct 241 AGGRSGLFEVLAAGGAGGTGGLSVNGGTGGTGGTGGGGGGVSNGGAGGAGGFGVSGSAGG 300 Query 301 NGGTGGDGGIFTGNGGTGGTGGTGTGNQLVGGEGGAGGAGGNAGILFGAGGIGGTGGTGL 360 NGGTGGDGGIFTGNGGTGGTGGTGTGNQLVGGEGGAGGAGGNAGILFGAGGIGGTGGTGL Sbjct 301 NGGTGGDGGIFTGNGGTGGTGGTGTGNQLVGGEGGAGGAGGNAGILFGAGGIGGTGGTGL 360 Query 361 GAPDPGGTGGKGGVGGIGGAGALFGPGGAGGTGGFGASSADQMAGGIGGSGGSGGAAKLI 420 GAPDPGGTGGKGGVGGIGGAGALFGPGGAGGTGGFGASSADQMAGGIGGSGGSGGAAKLI Sbjct 361 GAPDPGGTGGKGGVGGIGGAGALFGPGGAGGTGGFGASSADQMAGGIGGSGGSGGAAKLI 420 Query 421 GDGGAGGTGGDSVRGAAGSGGTGGTGGLIGDGGAGGAGGTGIEFGSVGGAGGAGGNAAGL 480 GDGGAGGTGGDSVRGAAGSGGTGGTGGLIGDGGAGGAGGTGIEFGSVGGAGGAGGNA GL Sbjct 421 GDGGAGGTGGDSVRGAAGSGGTGGTGGLIGDGGAGGAGGTGIEFGSVGGAGGAGGNAGGL 480 Query 481 SGAGGAGGAGGFGETAGDGGAGGNAGLLNGDGGAGGAGGLGIAGDGGNGGKGGKAGMVGN 540 SGAGGAGGAGGFGETAGDGGAGGNAGLLNGDGGAGGAGGLGIAGDGGNGGKGGKAGMVGN Sbjct 481 SGAGGAGGAGGFGETAGDGGAGGNAGLLNGDGGAGGAGGLGIAGDGGNGGKGGKAGMVGN 540 Query 541 GGDGGAGGASVVANGGVGGSGGNATLIGNGGNGGNGGVGSAPGKGGAGGTAGLLGLNGSP 600 GGDGGAGGA VANGGVGGSGGNATLIGNGGNGGNGGVGSAPGKGGAGGTAGLLGLNGSP Sbjct 541 GGDGGAGGAGGVANGGVGGSGGNATLIGNGGNGGNGGVGSAPGKGGAGGTAGLLGLNGSP 600 Query 601 GLS 603 GLS Sbjct 601 GLS 603 >gi|15840779|ref|NP_335816.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13880973|gb|AAK45630.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=535 Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust. Identities = 531/535 (99%), Positives = 531/535 (99%), Gaps = 0/535 (0%) Query 69 MSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGNGANGAPGT 128 MSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGNGANGAPGT Sbjct 1 MSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGNGANGAPGT 60 Query 129 GQAGGAGGLLYGNGGAGGSGAPGQAGGPGGAAGLFGNGGAGGAGGDGPGNGAAGGAGGAG 188 GQA GA GLLYGNGGAGGSGAPGQAGGPGGAAGLFGNGGAGGAGGDGPGNGAAGGAGGAG Sbjct 61 GQAVGADGLLYGNGGAGGSGAPGQAGGPGGAAGLFGNGGAGGAGGDGPGNGAAGGAGGAG 120 Query 189 GLLFGSGGAGGPGGVGNTGTGGLGGDGGAAGLFGAGGIGGAGGPGFNGGAGGAGGRSGLF 248 GLLFGSGGAGGPGGVGNTGTGGLGGDGGAAGLFGAGGIGGAGGPGFNGGAGGAGGRSGLF Sbjct 121 GLLFGSGGAGGPGGVGNTGTGGLGGDGGAAGLFGAGGIGGAGGPGFNGGAGGAGGRSGLF 180 Query 249 EVLAAGGAGGTGGLSVNGGTGGTGGTGGGGGLFSNGGAGGAGGFGVSGSAGGNGGTGGDG 308 EVLAAGGAGGTGGLSVNGGTGGTGGTGGGGGLFSNGGAGGAGGFGVSGSAGGNGGTGGDG Sbjct 181 EVLAAGGAGGTGGLSVNGGTGGTGGTGGGGGLFSNGGAGGAGGFGVSGSAGGNGGTGGDG 240 Query 309 GIFTGNGGTGGTGGTGTGNQLVGGEGGAGGAGGNAGILFGAGGIGGTGGTGLGAPDPGGT 368 GIFTGNGGTGGTGGTGTGNQLVGGEGGA GAGGNAGILFGAGGIGGTGGTGLGAPDPGGT Sbjct 241 GIFTGNGGTGGTGGTGTGNQLVGGEGGADGAGGNAGILFGAGGIGGTGGTGLGAPDPGGT 300 Query 369 GGKGGVGGIGGAGALFGPGGAGGTGGFGASSADQMAGGIGGSGGSGGAAKLIGDGGAGGT 428 GGKGGVGGIGGAGALFGPGGAGGTGGFGASSADQMAGGIGGSGGSGGAAKLIGDGGAGGT Sbjct 301 GGKGGVGGIGGAGALFGPGGAGGTGGFGASSADQMAGGIGGSGGSGGAAKLIGDGGAGGT 360 Query 429 GGDSVRGAAGSGGTGGTGGLIGDGGAGGAGGTGIEFGSVGGAGGAGGNAAGLSGAGGAGG 488 GGDSVRGAAGSGGTGGTGGLIGDGGAGGAGGTGIEFGSVGGAGGAGGNAAGLSGAGGAGG Sbjct 361 GGDSVRGAAGSGGTGGTGGLIGDGGAGGAGGTGIEFGSVGGAGGAGGNAAGLSGAGGAGG 420 Query 489 AGGFGETAGDGGAGGNAGLLNGDGGAGGAGGLGIAGDGGNGGKGGKAGMVGNGGDGGAGG 548 AGGFGETAGDGGAGGNAGL NGDGGAGGAGGLGIAGDGGNGGKGGKAGMVGNGGDGGAGG Sbjct 421 AGGFGETAGDGGAGGNAGLFNGDGGAGGAGGLGIAGDGGNGGKGGKAGMVGNGGDGGAGG 480 Query 549 ASVVANGGVGGSGGNATLIGNGGNGGNGGVGSAPGKGGAGGTAGLLGLNGSPGLS 603 ASVVANGGVGGSGGNATLIGNGGNGGNGGVGSAPGKGGAGGTAGLLGLNGSPGLS Sbjct 481 ASVVANGGVGGSGGNATLIGNGGNGGNGGVGSAPGKGGAGGTAGLLGLNGSPGLS 535 >gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174556|gb|ACC39666.1| PE-PGRS family protein [Mycobacterium marinum M] Length=963 Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 80/123 (66%), Positives = 94/123 (77%), Gaps = 0/123 (0%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 M+FV+ APE + AASDLANIGS + AN A PT ELLAAG DEVS AIASLF+ H Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 YQ++ A+M+AFH QFV TAG G Y+SAEAAAA PL+ LLN+VN PTQ LLGRPLIG+ Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD 120 Query 121 GAN 123 GA+ Sbjct 121 GAD 123 >gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174555|gb|ACC39665.1| PE-PGRS family protein [Mycobacterium marinum M] Length=946 Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 80/123 (66%), Positives = 94/123 (77%), Gaps = 0/123 (0%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 M+FV+ APE + AASDLANIGS + AN A PT ELLAAG DEVS AIASLF+ H Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 YQ++ A+M+AFH QFV TAG G Y+SAEAAAA PL+ LLN+VN PTQ LLGRPLIG+ Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD 120 Query 121 GAN 123 GA+ Sbjct 121 GAD 123 >gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183176632|gb|ACC41742.1| PE-PGRS family protein [Mycobacterium marinum M] Length=965 Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 80/123 (66%), Positives = 93/123 (76%), Gaps = 0/123 (0%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 M+FV+ APE + AASDLANIGS + AN A PT ELLAAG DEVS AIASLF+ H Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 YQ + A+M+AFH QFV TAG G Y+SAEAAAA PL+ LLN+VN PTQ LLGRPLIG+ Sbjct 61 DYQNLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD 120 Query 121 GAN 123 GA+ Sbjct 121 GAD 123 >gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178338|gb|ACC43448.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1451 Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 92/139 (67%), Positives = 113/139 (82%), Gaps = 0/139 (0%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS++IAAPE + AA+DLA I S L AAN +A PTT++LAAGADEVSAAIA+LF AH Q Sbjct 1 MSYLIAAPELMQSAAADLAGIESALSAANVSAAVPTTQILAAGADEVSAAIAALFGAHAQ 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 AYQA+ + ++AFH +FVQ +GA +YA+AEAA+ APL+ L ++VN PTQ LLGRPLIGN Sbjct 61 AYQALGSHVTAFHQEFVQALNSGAASYANAEAASIAPLQALYDLVNAPTQALLGRPLIGN 120 Query 121 GANGAPGTGQAGGAGGLLY 139 GANGAPGTGQ GG GGLL+ Sbjct 121 GANGAPGTGQNGGDGGLLF 139 >gi|148822671|ref|YP_001287425.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148721198|gb|ABR05823.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] Length=737 Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 91/122 (75%), Gaps = 4/122 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS VI PET+ AASD+A IGS++G AN+AA G TT +LAAGADEVSAAIA+LF +H + Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPL----EGLLNIVNTPTQLLLGRP 116 YQA+S Q++AFH +F QT +A G+Y SAEA AAPL +LN +N PTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|339631519|ref|YP_004723161.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339330875|emb|CCC26546.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=805 Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 91/122 (75%), Gaps = 4/122 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS VI PET+ AASD+A IGS++G AN+AA G TT +LAAGADEVSAAIA+LF +H + Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPL----EGLLNIVNTPTQLLLGRP 116 YQA+S Q++AFH +F QT +A G+Y SAEA AAPL +LN +N PTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobacterium tuberculosis CCDC5079] Length=1330 Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 91/122 (75%), Gaps = 4/122 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS VI PET+ AASD+A IGS++G AN+AA G TT +LAAGADEVSAAIA+LF +H + Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPL----EGLLNIVNTPTQLLLGRP 116 YQA+S Q++AFH +F QT +A G+Y SAEA AAPL +LN +N PTQ LLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 117 LI 118 LI Sbjct 122 LI 123 >gi|339294428|gb|AEJ46539.1| hypothetical protein CCDC5079_1349 [Mycobacterium tuberculosis CCDC5079] Length=742 Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 91/122 (75%), Gaps = 4/122 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS VI PET+ AASD+A IGS++G AN+AA G TT +LAAGADEVSAAIA+LF +H + Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPL----EGLLNIVNTPTQLLLGRP 116 YQA+S Q++AFH +F QT +A G+Y SAEA AAPL +LN +N PTQ LLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 117 LI 118 LI Sbjct 122 LI 123 >gi|15840912|ref|NP_335949.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13881115|gb|AAK45763.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=738 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 91/122 (75%), Gaps = 4/122 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS VI PET+ AASD+A IGS++G AN+AA G TT +LAAGADEVSAAIA+LF +H + Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPL----EGLLNIVNTPTQLLLGRP 116 YQA+S Q++AFH +F QT +A G+Y SAEA AAPL +LN +N PTQ LLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 117 LI 118 LI Sbjct 122 LI 123 >gi|57116866|ref|YP_177813.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148661244|ref|YP_001282767.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|7441232|pir||G70917 hypothetical glycine-rich protein Rv1452c - Mycobacterium tuberculosis (strain H37RV) gi|38490272|emb|CAE55391.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148505396|gb|ABQ73205.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=741 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 91/122 (75%), Gaps = 4/122 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS VI PET+ AASD+A IGS++G AN+AA G TT +LAAGADEVSAAIA+LF +H + Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPL----EGLLNIVNTPTQLLLGRP 116 YQA+S Q++AFH +F QT +A G+Y SAEA AAPL +LN +N PTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|339298066|gb|AEJ50176.1| hypothetical protein CCDC5180_1339 [Mycobacterium tuberculosis CCDC5180] Length=742 Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 91/122 (75%), Gaps = 4/122 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS VI PET+ AASD+A IGS++G AN+AA G TT +LAAGADEVSAAIA+LF +H + Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPL----EGLLNIVNTPTQLLLGRP 116 YQA+S Q++AFH +F QT +A G+Y SAEA AAPL +LN +N PTQ LLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 117 LI 118 LI Sbjct 122 LI 123 >gi|224989857|ref|YP_002644544.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|224772970|dbj|BAH25776.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601401|emb|CCC64074.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=740 Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 91/122 (75%), Gaps = 4/122 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS VI APET+ AA D+A IGS++G AN+AA G TT +LAAGADEVSAAIA+LF +H + Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPL----EGLLNIVNTPTQLLLGRP 116 YQA+S Q++AFH +F QT +A G+Y SAEA AAPL +LN +N PTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobacterium tuberculosis CCDC5180] Length=1330 Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 73/122 (60%), Positives = 91/122 (75%), Gaps = 4/122 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS VI PET+ AASD+A IGS++G AN+AA G TT +LAAGAD+VSAAIA+LF +H + Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADDVSAAIATLFGSHAR 61 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPL----EGLLNIVNTPTQLLLGRP 116 YQA+S Q++AFH +F QT +A G+Y SAEA AAPL +LN +N PTQ LLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 117 LI 118 LI Sbjct 122 LI 123 >gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339330873|emb|CCC26544.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=1389 Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 91/122 (75%), Gaps = 4/122 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS VI APET+ AA D+A IGS++G AN+AA G TT +LAAGADEVSAAIA+LF +H + Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPL----EGLLNIVNTPTQLLLGRP 116 YQA+S Q++AFH +F QT +A G+Y SAEA AAPL +LN +N PTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|31792646|ref|NP_855139.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31618236|emb|CAD96154.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=795 Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 91/122 (75%), Gaps = 4/122 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS VI APET+ AA D+A IGS++G AN+AA G TT +LAAGADEVSAAIA+LF +H + Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPL----EGLLNIVNTPTQLLLGRP 116 YQA+S Q++AFH +F QT +A G+Y SAEA AAPL +LN +N PTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989855|ref|YP_002644542.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121493027|emb|CAL71498.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772968|dbj|BAH25774.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601399|emb|CCC64072.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=1399 Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 91/122 (75%), Gaps = 4/122 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS VI APET+ AA D+A IGS++G AN+AA G TT +LAAGADEVSAAIA+LF +H + Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPL----EGLLNIVNTPTQLLLGRP 116 YQA+S Q++AFH +F QT +A G+Y SAEA AAPL +LN +N PTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|121637382|ref|YP_977605.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121493029|emb|CAL71500.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] Length=740 Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 91/122 (75%), Gaps = 4/122 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS VI APET+ AA D+A IGS++G AN+AA G TT +LAAGADEVSAAIA+LF +H + Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPL----EGLLNIVNTPTQLLLGRP 116 YQA+S Q++AFH +F QT +A G+Y SAEA AAPL +LN +N PTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31618234|emb|CAD96152.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=1408 Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 91/122 (75%), Gaps = 4/122 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS VI APET+ AA D+A IGS++G AN+AA G TT +LAAGADEVSAAIA+LF +H + Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPL----EGLLNIVNTPTQLLLGRP 116 YQA+S Q++AFH +F QT +A G+Y SAEA AAPL +LN +N PTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340005694|emb|CCC44860.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=1660 Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 77/124 (63%), Positives = 92/124 (75%), Gaps = 0/124 (0%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS+VIA PE + AA DLA IGS + AA+A A PTTE++AAGADEVSA IA+LF+AH Q Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 YQA+SAQ +AFH QFV T TA A Y + E A AA + +L VN PTQ LLGRPLIG+ Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRAVLGAVNAPTQTLLGRPLIGD 120 Query 121 GANG 124 GA+G Sbjct 121 GAHG 124 >gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] gi|289438352|gb|EFD20845.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] Length=1323 Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 77/124 (63%), Positives = 92/124 (75%), Gaps = 0/124 (0%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS+VIA PE + AA DLA IGS + AA+A A PTTE++AAGADEVSA IA+LF+AH Q Sbjct 6 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 65 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 YQA+SAQ +AFH QFV T TA A Y + E A AA + +L VN PTQ LLGRPLIG+ Sbjct 66 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 125 Query 121 GANG 124 GA+G Sbjct 126 GAHG 129 >gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13882294|gb|AAK46868.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=1665 Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 77/124 (63%), Positives = 92/124 (75%), Gaps = 0/124 (0%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS+VIA PE + AA DLA IGS + AA+A A PTTE++AAGADEVSA IA+LF+AH Q Sbjct 6 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 65 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 YQA+SAQ +AFH QFV T TA A Y + E A AA + +L VN PTQ LLGRPLIG+ Sbjct 66 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 125 Query 121 GANG 124 GA+G Sbjct 126 GAHG 129 >gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339331872|emb|CCC27575.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=1657 Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 77/124 (63%), Positives = 92/124 (75%), Gaps = 0/124 (0%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS+VIA PE + AA DLA IGS + AA+A A PTTE++AAGADEVSA IA+LF+AH Q Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 YQA+SAQ +AFH QFV T TA A Y + E A AA + +L VN PTQ LLGRPLIG+ Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120 Query 121 GANG 124 GA+G Sbjct 121 GAHG 124 >gi|57116996|ref|YP_177887.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148662325|ref|YP_001283848.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|7441223|pir||A70869 hypothetical glycine-rich protein Rv2490c - Mycobacterium tuberculosis (strain H37RV) gi|41353424|emb|CAE55496.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148506477|gb|ABQ74286.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=1660 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 77/124 (63%), Positives = 92/124 (75%), Gaps = 0/124 (0%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS+VIA PE + AA DLA IGS + AA+A A PTTE++AAGADEVSA IA+LF+AH Q Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 YQA+SAQ +AFH QFV T TA A Y + E A AA + +L VN PTQ LLGRPLIG+ Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120 Query 121 GANG 124 GA+G Sbjct 121 GAHG 124 >gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1644 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 77/124 (63%), Positives = 92/124 (75%), Gaps = 0/124 (0%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS+VIA PE + AA DLA IGS + AA+A A PTTE++AAGADEVSA IA+LF+AH Q Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 YQA+SAQ +AFH QFV T TA A Y + E A AA + +L VN PTQ LLGRPLIG+ Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120 Query 121 GANG 124 GA+G Sbjct 121 GAHG 124 >gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024 [Mycobacterium tuberculosis KZN 1435] gi|253319935|gb|ACT24538.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|328458200|gb|AEB03623.1| hypothetical protein TBSG_01494 [Mycobacterium tuberculosis KZN 4207] Length=1616 Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 77/124 (63%), Positives = 92/124 (75%), Gaps = 0/124 (0%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS+VIA PE + AA DLA IGS + AA+A A PTTE++AAGADEVSA IA+LF+AH Q Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 YQA+SAQ +AFH QFV T TA A Y + E A AA + +L VN PTQ LLGRPLIG+ Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120 Query 121 GANG 124 GA+G Sbjct 121 GAHG 124 >gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175442|gb|ACC40552.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1386 Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 85/122 (70%), Gaps = 4/122 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MSFV APE + AASDL +GST+ AAN AA G TT +LAAGADEVSA IA+LF H Sbjct 1 MSFVGVAPEMVAVAASDLERLGSTISAANVAAAGSTTTILAAGADEVSAVIAALFGTHAL 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPL----EGLLNIVNTPTQLLLGRP 116 YQA+S Q+S FH QFVQT T G GAY++AE PL + LLN+VN PTQ L GRP Sbjct 61 EYQAISTQLSVFHEQFVQTLTNGVGAYSAAELVNVLPLQNVEQDLLNLVNAPTQALFGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|183985312|ref|YP_001853603.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178638|gb|ACC43748.1| PE-PGRS family protein [Mycobacterium marinum M] Length=846 Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 79/130 (61%), Positives = 97/130 (75%), Gaps = 5/130 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAA-GADEVSAAIASLFAAHG 59 MS+V A+PE L AA++++ IGS+L ANA+A PTT LL+A GADEVSAA+ ++F H Sbjct 1 MSYVFASPEVLNAAAAEVSTIGSSLQTANASAAAPTTALLSALGADEVSAAVTAMFGNHA 60 Query 60 QAYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEG----LLNIVNTPTQLLLGR 115 QAYQAVS Q + FH +FV TAGA AY+SAEA+ AA L+ LLN+VN PTQ LLGR Sbjct 61 QAYQAVSTQAAEFHDRFVAALTAGADAYSSAEASTAATLQSLPQDLLNVVNAPTQALLGR 120 Query 116 PLIGNGANGA 125 LIGNGANGA Sbjct 121 ALIGNGANGA 130 >gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004656|emb|CCC43800.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=1006 Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 89/122 (73%), Gaps = 4/122 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS VI PE + AASD+A IGS GAAN+ A G TT +LAAGADEVSAAIA+LF +H + Sbjct 1 MSLVIVTPELVAAAASDVARIGSGFGAANSTAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPL----EGLLNIVNTPTQLLLGRP 116 YQA+S Q++AFH +FVQT +A G+Y SAEA AAPL +LN +N PTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|183984157|ref|YP_001852448.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183177483|gb|ACC42593.1| PE-PGRS family protein [Mycobacterium marinum M] Length=683 Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 78/128 (61%), Positives = 96/128 (75%), Gaps = 4/128 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 M+++ P+ L AA DL IGS L AAN AA+GPTT +LAAGADEVSAAIA++F+ HGQ Sbjct 1 MAYLTVFPDMLAGAAGDLVGIGSQLAAANTAAIGPTTTVLAAGADEVSAAIAAVFSGHGQ 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGL----LNIVNTPTQLLLGRP 116 AYQ +SAQ++AFH +FV+ AGA +Y AEAA A PL+ L L I+N PTQ L+GRP Sbjct 61 AYQVLSAQVAAFHQRFVEALNAGAQSYVGAEAANATPLQTLEQDALGIINAPTQALVGRP 120 Query 117 LIGNGANG 124 LIGNGANG Sbjct 121 LIGNGANG 128 >gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M] gi|183175990|gb|ACC41100.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M] Length=2118 Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 78/133 (59%), Positives = 93/133 (70%), Gaps = 7/133 (5%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS V +PE + AASDLA IGS+LGAANAAA GPTT +L+A ADEVS AIA+LF H Sbjct 1 MSLVTVSPELVAGAASDLARIGSSLGAANAAAAGPTTTVLSAAADEVSVAIATLFGTHAA 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGL-------LNIVNTPTQLLL 113 YQ++SA+M+AFH QFVQT T+GAG Y S EA A+ + L LN +N PTQ L Sbjct 61 EYQSLSARMAAFHEQFVQTLTSGAGIYVSTEATNASFISALQLAEQNALNAINAPTQSWL 120 Query 114 GRPLIGNGANGAP 126 GRPLIGNG + P Sbjct 121 GRPLIGNGVDATP 133 >gi|253799499|ref|YP_003032500.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|289554759|ref|ZP_06443969.1| predicted protein [Mycobacterium tuberculosis KZN 605] gi|253321002|gb|ACT25605.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|289439391|gb|EFD21884.1| predicted protein [Mycobacterium tuberculosis KZN 605] gi|328459247|gb|AEB04670.1| hypothetical protein TBSG_02541 [Mycobacterium tuberculosis KZN 4207] Length=738 Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 76/122 (63%), Positives = 92/122 (76%), Gaps = 4/122 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS VI PET+ AASD+A IGS++GAANAAA G TT +LAAGADEVSAAIA+LF +H + Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPL----EGLLNIVNTPTQLLLGRP 116 YQA+S Q++AFH +F QT +A G+Y SAEA AAPL +LN +N PTQ LLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 117 LI 118 LI Sbjct 122 LI 123 >gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531 [Mycobacterium tuberculosis KZN 1435] gi|253321004|gb|ACT25607.1| predicted protein [Mycobacterium tuberculosis KZN 1435] gi|328459249|gb|AEB04672.1| hypothetical protein TBSG_02543 [Mycobacterium tuberculosis KZN 4207] Length=1408 Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 76/122 (63%), Positives = 92/122 (76%), Gaps = 4/122 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS VI PET+ AASD+A IGS++GAANAAA G TT +LAAGADEVSAAIA+LF +H + Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPL----EGLLNIVNTPTQLLLGRP 116 YQA+S Q++AFH +F QT +A G+Y SAEA AAPL +LN +N PTQ LLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 117 LI 118 LI Sbjct 122 LI 123 >gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|7441217|pir||E70917 hypothetical glycine-rich protein Rv1450c - Mycobacterium tuberculosis (strain H37RV) gi|38490271|emb|CAE55390.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] Length=1329 Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 76/122 (63%), Positives = 92/122 (76%), Gaps = 4/122 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS VI APET+ AA D+A IGS++GAANAAA G TT +LAAGADEVSAAIA+LF +H + Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPL----EGLLNIVNTPTQLLLGRP 116 YQA+S Q++AFH +F QT +A G+Y SAEA AAPL +LN +N PTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|340626105|ref|YP_004744557.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004295|emb|CCC43436.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=856 Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 90/127 (71%), Positives = 99/127 (78%), Gaps = 4/127 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MSFVIAAPE LV ASDLA IGS L ANAA L PTT LLAAGADEVS+AIA+LF AHGQ Sbjct 1 MSFVIAAPEALVAVASDLAGIGSALAEANAAVLAPTTGLLAAGADEVSSAIAALFGAHGQ 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEG----LLNIVNTPTQLLLGRP 116 AYQ VSAQ SAFHAQFVQ T G GAYA+AEAA + + LL+++N PTQ LLGRP Sbjct 61 AYQTVSAQASAFHAQFVQALTGGGGAYAAAEAANVSAAQSVDQRLLDLINGPTQALLGRP 120 Query 117 LIGNGAN 123 LIG+GAN Sbjct 121 LIGDGAN 127 >gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13881112|gb|AAK45760.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=1408 Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 76/122 (63%), Positives = 92/122 (76%), Gaps = 4/122 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS VI APET+ AA D+A IGS++GAANAAA G TT +LAAGADEVSAAIA+LF +H + Sbjct 2 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPL----EGLLNIVNTPTQLLLGRP 116 YQA+S Q++AFH +F QT +A G+Y SAEA AAPL +LN +N PTQ LLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 117 LI 118 LI Sbjct 122 LI 123 >gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148721196|gb|ABR05821.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|344219280|gb|AEM99910.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1407 Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 76/122 (63%), Positives = 92/122 (76%), Gaps = 4/122 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS VI APET+ AA D+A IGS++GAANAAA G TT +LAAGADEVSAAIA+LF +H + Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPL----EGLLNIVNTPTQLLLGRP 116 YQA+S Q++AFH +F QT +A G+Y SAEA AAPL +LN +N PTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148505394|gb|ABQ73203.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=1398 Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 76/122 (63%), Positives = 92/122 (76%), Gaps = 4/122 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS VI APET+ AA D+A IGS++GAANAAA G TT +LAAGADEVSAAIA+LF +H + Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPL----EGLLNIVNTPTQLLLGRP 116 YQA+S Q++AFH +F QT +A G+Y SAEA AAPL +LN +N PTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|118616864|ref|YP_905196.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99] gi|118568974|gb|ABL03725.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99] Length=834 Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 86/129 (67%), Positives = 99/129 (77%), Gaps = 0/129 (0%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MS+V+A+PE + AASDLA IGS L ANAAA PT E+LAAGADEVSAAIA+ F AH Q Sbjct 1 MSYVVASPEYVAAAASDLAGIGSALSTANAAAAAPTIEVLAAGADEVSAAIAAFFGAHAQ 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 AYQA+S Q SAFH QFVQ TAGAGAYA AEA A+PL+ L+++N P Q L GRPLIG+ Sbjct 61 AYQALSEQASAFHLQFVQAMTAGAGAYAGAEAVNASPLQAALDVLNAPAQALFGRPLIGD 120 Query 121 GANGAPGTG 129 GA GAPG Sbjct 121 GAGGAPGQS 129 >gi|183982702|ref|YP_001850993.1| PE-PGRS family protein, PE_PGRS9_1 [Mycobacterium marinum M] gi|183176028|gb|ACC41138.1| PE-PGRS family protein, PE_PGRS9_1 [Mycobacterium marinum M] Length=893 Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 75/130 (58%), Positives = 96/130 (74%), Gaps = 4/130 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 M+FV+A P+ + AA+DLA +GS + AAN AA G TT ++AA DEVSAAIA+LF+ HGQ Sbjct 1 MAFVLAVPDMVAGAAADLAGVGSVIDAANTAAAGSTTGIVAAAEDEVSAAIAALFSGHGQ 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAA----PLEGLLNIVNTPTQLLLGRP 116 AYQ +SA+++ FHAQF + AGA AY+ AEAA A+ PL+ LN +NTP Q L GRP Sbjct 61 AYQQISARVAEFHAQFERVLAAGAQAYSGAEAANASFLQDPLQTALNAINTPVQDLTGRP 120 Query 117 LIGNGANGAP 126 L+GNGANG P Sbjct 121 LVGNGANGVP 130 >gi|339295509|gb|AEJ47620.1| putative PE family protein [Mycobacterium tuberculosis CCDC5079] Length=778 Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 87/125 (70%), Positives = 101/125 (81%), Gaps = 0/125 (0%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MSFVIA PE L AASDLANIGST+ AANAAA PTT ++AA ADEVSAA+A+LF ++ Q Sbjct 1 MSFVIAVPEALTMAASDLANIGSTINAANAAAALPTTGVVAAAADEVSAAVAALFGSYAQ 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 +YQA AQ+SAFHAQFVQ+ T GA +Y AEA +AAPL+ LL +VN P Q LLGRPLIGN Sbjct 61 SYQAFGAQLSAFHAQFVQSLTNGARSYVVAEATSAAPLQDLLGVVNAPAQALLGRPLIGN 120 Query 121 GANGA 125 GANGA Sbjct 121 GANGA 125 >gi|15842175|ref|NP_337212.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13882462|gb|AAK47026.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=788 Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 86/125 (69%), Positives = 100/125 (80%), Gaps = 0/125 (0%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MSFVIA PE L AASDLANIGST+ AANAAA PTT ++AA ADEVSAA+A+LF ++ Q Sbjct 11 MSFVIAVPEALTMAASDLANIGSTINAANAAAALPTTGVVAAAADEVSAALAALFGSYAQ 70 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 +Y A AQ+SAFHAQFVQ+ T GA +Y AEA +AAPL+ LL +VN P Q LLGRPLIGN Sbjct 71 SYHAFGAQLSAFHAQFVQSLTNGARSYVVAEATSAAPLQDLLGVVNAPAQALLGRPLIGN 130 Query 121 GANGA 125 GANGA Sbjct 131 GANGA 135 >gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175440|gb|ACC40550.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1397 Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 72/123 (59%), Positives = 88/123 (72%), Gaps = 2/123 (1%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MSFV PE +V AASDL+ I S + AN+ A TT +L A ADEVSAAIA+LF H Q Sbjct 1 MSFVSVTPEMVVAAASDLSGINSAIAQANSVAAAATTTVLPAAADEVSAAIAALFGTHAQ 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 YQA+SA+++AFH +FVQ+ GAG+Y AEAA A +GLL +VN PTQ L GRPLIG+ Sbjct 61 QYQAISAELAAFHDRFVQSLNTGAGSYLRAEAANAE--QGLLGLVNAPTQALFGRPLIGD 118 Query 121 GAN 123 GAN Sbjct 119 GAN 121 >gi|118618448|ref|YP_906780.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99] gi|118570558|gb|ABL05309.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99] Length=870 Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 73/130 (57%), Positives = 93/130 (72%), Gaps = 4/130 (3%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 M+FV+A P+ + AA+DLA +GS + AAN AA G TT ++AA DEVSAAIA+LF+ HGQ Sbjct 1 MAFVLAVPDMVAEAAADLAGVGSVIDAANTAAAGSTTGIVAAAEDEVSAAIAALFSGHGQ 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAA----PLEGLLNIVNTPTQLLLGRP 116 AYQ +S +++ FHAQF + F AG AY+ AEAA A+ PL+ LN N P Q L GRP Sbjct 61 AYQQISTRVAEFHAQFERVFAAGVQAYSGAEAANASFLQDPLQTALNATNKPVQDLTGRP 120 Query 117 LIGNGANGAP 126 L+GNGANG P Sbjct 121 LVGNGANGVP 130 >gi|121638523|ref|YP_978747.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991017|ref|YP_002645704.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121494171|emb|CAL72649.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774130|dbj|BAH26936.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341602561|emb|CCC65237.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=800 Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 87/125 (70%), Positives = 101/125 (81%), Gaps = 0/125 (0%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MSFVIA PE L AASDLANIGST+ AANAAA PTT ++AA ADEVSAA+A+LF ++ Q Sbjct 1 MSFVIAVPEALTMAASDLANIGSTINAANAAAALPTTGVVAAAADEVSAAVAALFGSYAQ 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 +YQA AQ+SAFHAQFVQ+ T GA +Y AEA +AAPL+ LL +VN P Q LLGRPLIGN Sbjct 61 SYQAFGAQLSAFHAQFVQSLTNGARSYVVAEATSAAPLQDLLGVVNAPAQALLGRPLIGN 120 Query 121 GANGA 125 GANGA Sbjct 121 GANGA 125 >gi|31793820|ref|NP_856313.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|57117010|ref|YP_177896.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|294993088|ref|ZP_06798779.1| PE-PGRS family protein [Mycobacterium tuberculosis 210] 9 more sequence titles Length=778 Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 87/125 (70%), Positives = 101/125 (81%), Gaps = 0/125 (0%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MSFVIA PE L AASDLANIGST+ AANAAA PTT ++AA ADEVSAA+A+LF ++ Q Sbjct 1 MSFVIAVPEALTMAASDLANIGSTINAANAAAALPTTGVVAAAADEVSAAVAALFGSYAQ 60 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 +YQA AQ+SAFHAQFVQ+ T GA +Y AEA +AAPL+ LL +VN P Q LLGRPLIGN Sbjct 61 SYQAFGAQLSAFHAQFVQSLTNGARSYVVAEATSAAPLQDLLGVVNAPAQALLGRPLIGN 120 Query 121 GANGA 125 GANGA Sbjct 121 GANGA 125 >gi|289754754|ref|ZP_06514132.1| predicted protein [Mycobacterium tuberculosis EAS054] gi|289695341|gb|EFD62770.1| predicted protein [Mycobacterium tuberculosis EAS054] Length=674 Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 87/125 (70%), Positives = 101/125 (81%), Gaps = 0/125 (0%) Query 1 MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASLFAAHGQ 60 MSFVIA PE L AASDLANIGST+ AANAAA PTT ++AA ADEVSAA+A+LF ++ Q Sbjct 11 MSFVIAVPEALTMAASDLANIGSTINAANAAAALPTTGVVAAAADEVSAAVAALFGSYAQ 70 Query 61 AYQAVSAQMSAFHAQFVQTFTAGAGAYASAEAAAAAPLEGLLNIVNTPTQLLLGRPLIGN 120 +YQA AQ+SAFHAQFVQ+ T GA +Y AEA +AAPL+ LL +VN P Q LLGRPLIGN Sbjct 71 SYQAFGAQLSAFHAQFVQSLTNGARSYVVAEATSAAPLQDLLGVVNAPAQALLGRPLIGN 130 Query 121 GANGA 125 GANGA Sbjct 131 GANGA 135 Lambda K H 0.308 0.141 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1369331474720 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40